Query 045072
Match_columns 556
No_of_seqs 174 out of 1618
Neff 10.6
Searched_HMMs 46136
Date Fri Mar 29 09:34:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045072.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045072hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 2.8E-83 6.2E-88 638.2 50.6 520 2-550 4-535 (537)
2 KOG1177 Long chain fatty acid 100.0 4E-81 8.7E-86 578.3 43.8 523 4-550 40-590 (596)
3 COG0318 CaiC Acyl-CoA syntheta 100.0 4.9E-76 1.1E-80 609.2 52.9 511 8-547 5-527 (534)
4 COG0365 Acs Acyl-coenzyme A sy 100.0 1.8E-76 3.9E-81 585.9 44.0 492 19-547 14-522 (528)
5 COG1021 EntE Peptide arylation 100.0 6.8E-74 1.5E-78 518.3 34.8 505 10-548 24-539 (542)
6 PLN02860 o-succinylbenzoate-Co 100.0 1.5E-71 3.3E-76 583.4 53.4 528 9-555 2-562 (563)
7 PLN03102 acyl-activating enzym 100.0 2.4E-71 5.2E-76 582.5 55.0 540 1-549 1-556 (579)
8 PRK07788 acyl-CoA synthetase; 100.0 1.5E-71 3.2E-76 582.8 51.5 495 14-544 49-548 (549)
9 PTZ00237 acetyl-CoA synthetase 100.0 1.8E-71 3.8E-76 588.4 47.5 519 15-549 60-625 (647)
10 TIGR02316 propion_prpE propion 100.0 1.7E-70 3.7E-75 581.6 52.7 515 17-550 55-607 (628)
11 PLN02736 long-chain acyl-CoA s 100.0 1.7E-71 3.7E-76 591.2 44.4 523 10-556 40-650 (651)
12 PRK07529 AMP-binding domain pr 100.0 8.8E-70 1.9E-74 575.6 56.4 522 6-548 17-571 (632)
13 PLN02654 acetate-CoA ligase 100.0 4.4E-70 9.5E-75 579.6 52.0 515 17-548 91-641 (666)
14 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 1.5E-69 3.2E-74 575.4 52.4 511 15-548 58-603 (625)
15 PRK13295 cyclohexanecarboxylat 100.0 9.2E-69 2E-73 561.1 55.8 503 10-548 20-545 (547)
16 PRK06334 long chain fatty acid 100.0 3E-69 6.5E-74 561.7 51.1 504 10-548 15-536 (539)
17 PRK00174 acetyl-CoA synthetase 100.0 7.6E-69 1.6E-73 570.9 53.4 508 17-548 70-611 (637)
18 PRK08314 long-chain-fatty-acid 100.0 1.4E-68 3.1E-73 560.8 54.4 521 6-547 2-542 (546)
19 PLN02574 4-coumarate--CoA liga 100.0 7.4E-69 1.6E-73 562.7 51.8 504 14-550 40-557 (560)
20 PRK06839 acyl-CoA synthetase; 100.0 1.4E-68 3E-73 554.8 52.3 489 15-547 3-495 (496)
21 PRK05677 long-chain-fatty-acid 100.0 2.1E-68 4.6E-73 559.9 54.2 514 14-548 24-558 (562)
22 PRK13382 acyl-CoA synthetase; 100.0 1.9E-68 4.1E-73 556.7 52.7 490 13-543 42-536 (537)
23 PLN02246 4-coumarate--CoA liga 100.0 4.3E-68 9.3E-73 555.1 54.8 506 11-547 20-536 (537)
24 PLN02614 long-chain acyl-CoA s 100.0 1.4E-69 3.1E-74 574.4 43.9 518 14-554 45-656 (666)
25 PRK04319 acetyl-CoA synthetase 100.0 1.5E-68 3.2E-73 562.0 50.9 505 16-552 45-564 (570)
26 PRK06155 crotonobetaine/carnit 100.0 5E-68 1.1E-72 553.8 53.9 505 6-546 13-523 (542)
27 PRK03640 O-succinylbenzoic aci 100.0 3.7E-68 7.9E-73 549.6 50.4 480 14-547 2-482 (483)
28 PRK07470 acyl-CoA synthetase; 100.0 7.4E-68 1.6E-72 552.8 52.6 518 9-555 2-526 (528)
29 PRK07656 long-chain-fatty-acid 100.0 9.5E-68 2.1E-72 551.1 53.2 506 11-543 2-512 (513)
30 PRK05605 long-chain-fatty-acid 100.0 1.7E-67 3.8E-72 554.9 54.7 520 10-549 28-571 (573)
31 PRK10524 prpE propionyl-CoA sy 100.0 8.1E-68 1.7E-72 562.6 51.9 515 16-549 55-607 (629)
32 PRK08162 acyl-CoA synthetase; 100.0 4.2E-67 9.1E-72 549.3 56.0 528 11-552 15-544 (545)
33 PLN02479 acetate-CoA ligase 100.0 2.4E-67 5.2E-72 552.1 53.9 548 4-556 10-567 (567)
34 PRK05857 acyl-CoA synthetase; 100.0 6.2E-68 1.3E-72 553.3 48.1 514 7-551 7-535 (540)
35 TIGR01217 ac_ac_CoA_syn acetoa 100.0 2E-67 4.3E-72 558.5 52.7 507 19-549 89-628 (652)
36 PRK07638 acyl-CoA synthetase; 100.0 2.4E-67 5.2E-72 543.4 50.2 482 14-550 1-484 (487)
37 PRK06018 putative acyl-CoA syn 100.0 9.5E-67 2.1E-71 545.3 55.0 524 11-552 7-539 (542)
38 PRK06187 long-chain-fatty-acid 100.0 5.7E-67 1.2E-71 546.6 52.7 516 10-548 2-520 (521)
39 PLN02861 long-chain-fatty-acid 100.0 4.5E-68 9.8E-73 563.7 44.5 520 11-554 40-653 (660)
40 PRK07786 long-chain-fatty-acid 100.0 7.3E-67 1.6E-71 546.2 52.6 515 10-556 13-533 (542)
41 PLN02330 4-coumarate--CoA liga 100.0 5.7E-67 1.2E-71 547.4 51.9 508 11-551 25-545 (546)
42 PRK07008 long-chain-fatty-acid 100.0 1.5E-66 3.3E-71 543.0 54.2 520 12-551 8-537 (539)
43 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 8.6E-67 1.9E-71 544.0 52.2 497 11-542 20-527 (527)
44 PRK03584 acetoacetyl-CoA synth 100.0 6.7E-67 1.4E-71 557.3 52.3 501 26-551 96-629 (655)
45 PRK08316 acyl-CoA synthetase; 100.0 9.1E-67 2E-71 545.0 52.4 510 11-550 8-522 (523)
46 PTZ00342 acyl-CoA synthetase; 100.0 1.7E-67 3.6E-72 556.5 46.9 515 13-549 60-736 (746)
47 PRK05852 acyl-CoA synthetase; 100.0 5.2E-67 1.1E-71 546.6 50.0 508 13-547 15-532 (534)
48 PRK06087 short chain acyl-CoA 100.0 1.5E-66 3.3E-71 545.0 52.9 511 10-550 19-539 (547)
49 PRK09274 peptide synthase; Pro 100.0 3.1E-67 6.8E-72 550.8 47.6 510 10-549 2-550 (552)
50 PRK06060 acyl-CoA synthetase; 100.0 3.6E-67 7.9E-72 563.6 49.0 479 14-546 4-491 (705)
51 PRK06164 acyl-CoA synthetase; 100.0 3.8E-66 8.2E-71 541.4 55.3 522 9-553 5-538 (540)
52 PRK07769 long-chain-fatty-acid 100.0 4.8E-67 1E-71 556.4 47.1 509 9-549 16-616 (631)
53 PRK08315 AMP-binding domain pr 100.0 3.2E-66 7E-71 544.5 52.3 519 6-550 8-554 (559)
54 PRK07514 malonyl-CoA synthase; 100.0 5.3E-66 1.1E-70 536.4 53.2 496 13-548 2-502 (504)
55 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 5.7E-66 1.2E-70 539.3 53.5 496 11-542 19-537 (538)
56 TIGR03098 ligase_PEP_1 acyl-Co 100.0 5.6E-66 1.2E-70 537.8 52.6 500 15-543 1-514 (515)
57 PRK07867 acyl-CoA synthetase; 100.0 4.2E-66 9.2E-71 537.3 51.1 490 11-548 2-508 (529)
58 PRK05620 long-chain-fatty-acid 100.0 6.6E-66 1.4E-70 542.6 53.0 528 8-548 4-558 (576)
59 PRK06145 acyl-CoA synthetase; 100.0 5.1E-66 1.1E-70 535.3 51.1 490 14-546 2-496 (497)
60 PRK12583 acyl-CoA synthetase; 100.0 8.6E-66 1.9E-70 541.4 53.6 517 6-549 10-554 (558)
61 PLN02387 long-chain-fatty-acid 100.0 4.3E-67 9.3E-72 558.3 44.0 520 14-553 58-695 (696)
62 PRK10946 entE enterobactin syn 100.0 9.3E-66 2E-70 536.7 53.2 499 11-549 22-534 (536)
63 PRK08008 caiC putative crotono 100.0 1.2E-65 2.6E-70 535.0 52.0 501 12-542 5-517 (517)
64 PRK09088 acyl-CoA synthetase; 100.0 6.5E-66 1.4E-70 533.1 49.0 478 21-548 2-486 (488)
65 PRK06188 acyl-CoA synthetase; 100.0 2.1E-65 4.5E-70 533.9 53.0 508 11-550 9-520 (524)
66 PRK08043 bifunctional acyl-[ac 100.0 5E-66 1.1E-70 554.9 49.0 496 12-548 202-714 (718)
67 PRK12492 long-chain-fatty-acid 100.0 3.2E-65 6.9E-70 535.8 53.2 510 14-544 24-561 (562)
68 PLN03052 acetate--CoA ligase; 100.0 2.9E-65 6.2E-70 543.6 52.3 506 18-549 179-723 (728)
69 PRK07059 Long-chain-fatty-acid 100.0 5.5E-65 1.2E-69 534.1 53.3 514 10-544 19-555 (557)
70 TIGR03443 alpha_am_amid L-amin 100.0 1.2E-65 2.6E-70 591.3 52.3 518 13-544 235-825 (1389)
71 PRK12467 peptide synthase; Pro 100.0 2.2E-66 4.7E-71 634.1 47.3 500 3-547 3084-3594(3956)
72 PRK13388 acyl-CoA synthetase; 100.0 4.1E-65 8.9E-70 531.6 49.9 487 14-549 3-508 (540)
73 COG1022 FAA1 Long-chain acyl-C 100.0 3.6E-66 7.7E-71 519.3 40.1 509 10-554 12-608 (613)
74 PRK06178 acyl-CoA synthetase; 100.0 3E-64 6.5E-69 529.7 54.6 522 11-548 30-566 (567)
75 PRK06710 long-chain-fatty-acid 100.0 1.1E-64 2.4E-69 532.5 51.2 518 14-552 24-560 (563)
76 PRK13383 acyl-CoA synthetase; 100.0 1.2E-64 2.5E-69 526.6 50.4 476 12-542 33-515 (516)
77 PRK08751 putative long-chain f 100.0 1.8E-64 4E-69 530.8 51.7 511 13-544 24-557 (560)
78 PRK12476 putative fatty-acid-- 100.0 3.2E-65 7E-70 540.1 45.6 503 13-549 33-608 (612)
79 PRK05851 long-chain-fatty-acid 100.0 2.3E-65 4.9E-70 532.1 43.6 484 16-547 4-522 (525)
80 PLN02430 long-chain-fatty-acid 100.0 2.7E-65 5.9E-70 541.2 44.1 520 12-555 40-654 (660)
81 PRK08279 long-chain-acyl-CoA s 100.0 2.2E-64 4.7E-69 533.7 50.5 506 8-548 31-565 (600)
82 TIGR03205 pimA dicarboxylate-- 100.0 9.9E-64 2.1E-68 522.7 53.1 515 8-542 15-541 (541)
83 PRK08180 feruloyl-CoA synthase 100.0 5.4E-65 1.2E-69 538.2 43.9 506 8-555 33-604 (614)
84 TIGR01734 D-ala-DACP-lig D-ala 100.0 3.4E-64 7.4E-69 522.5 47.3 488 15-546 1-501 (502)
85 PRK08633 2-acyl-glycerophospho 100.0 2.2E-64 4.9E-69 573.8 50.0 516 11-548 612-1144(1146)
86 PRK10252 entF enterobactin syn 100.0 1.8E-64 3.9E-69 579.9 48.7 491 10-544 454-964 (1296)
87 PRK07787 acyl-CoA synthetase; 100.0 6.2E-64 1.3E-68 515.1 46.6 454 26-543 12-469 (471)
88 PTZ00216 acyl-CoA synthetase; 100.0 1.6E-64 3.4E-69 540.1 43.4 513 12-554 67-698 (700)
89 PRK12316 peptide synthase; Pro 100.0 1.9E-64 4.2E-69 626.3 49.7 486 13-547 510-1006(5163)
90 PRK13390 acyl-CoA synthetase; 100.0 1.3E-63 2.9E-68 517.3 47.2 481 22-542 5-501 (501)
91 PRK12467 peptide synthase; Pro 100.0 4.9E-64 1.1E-68 613.5 49.3 497 9-547 507-1018(3956)
92 TIGR02262 benz_CoA_lig benzoat 100.0 4.9E-63 1.1E-67 514.0 49.5 494 17-544 7-508 (508)
93 PRK07445 O-succinylbenzoic aci 100.0 9.1E-64 2E-68 507.8 42.8 431 39-550 19-450 (452)
94 PRK12316 peptide synthase; Pro 100.0 3.1E-64 6.8E-69 624.4 47.4 491 11-545 2000-2502(5163)
95 PRK08974 long-chain-fatty-acid 100.0 2.9E-62 6.3E-67 513.9 54.4 514 13-548 22-556 (560)
96 KOG1256 Long-chain acyl-CoA sy 100.0 3.5E-64 7.5E-69 496.4 37.2 524 10-555 71-688 (691)
97 PRK09029 O-succinylbenzoic aci 100.0 7.8E-63 1.7E-67 505.4 47.7 453 15-550 3-456 (458)
98 PRK05691 peptide synthase; Val 100.0 2.1E-63 4.5E-68 613.3 50.4 499 8-544 3714-4225(4334)
99 PRK04813 D-alanine--poly(phosp 100.0 1.8E-62 4E-67 510.0 49.9 489 14-546 2-502 (503)
100 PRK07798 acyl-CoA synthetase; 100.0 6.2E-62 1.3E-66 510.0 52.8 502 14-547 3-532 (533)
101 PRK12582 acyl-CoA synthetase; 100.0 2.8E-63 6.2E-68 526.0 42.7 507 6-555 41-615 (624)
102 PRK13391 acyl-CoA synthetase; 100.0 5E-62 1.1E-66 506.5 50.8 494 20-548 3-510 (511)
103 PRK12406 long-chain-fatty-acid 100.0 1.1E-61 2.4E-66 504.0 52.4 494 31-551 3-507 (509)
104 PRK05691 peptide synthase; Val 100.0 1.1E-62 2.3E-67 607.0 49.1 488 9-544 1126-1625(4334)
105 KOG1175 Acyl-CoA synthetase [L 100.0 2.4E-62 5.2E-67 485.3 41.8 503 18-548 68-603 (626)
106 PRK08276 long-chain-fatty-acid 100.0 1.5E-61 3.2E-66 502.4 47.3 486 31-551 3-500 (502)
107 PRK06814 acylglycerophosphoeth 100.0 2E-61 4.3E-66 547.1 52.2 500 11-550 628-1135(1140)
108 PRK07868 acyl-CoA synthetase; 100.0 4E-61 8.6E-66 528.3 52.1 493 10-546 443-957 (994)
109 PLN03051 acyl-activating enzym 100.0 7.6E-61 1.6E-65 494.6 44.2 454 71-549 1-493 (499)
110 PRK09192 acyl-CoA synthetase; 100.0 1.3E-60 2.9E-65 502.3 44.0 502 14-553 21-572 (579)
111 PRK05850 acyl-CoA synthetase; 100.0 2.1E-60 4.6E-65 501.7 45.0 500 14-548 1-569 (578)
112 TIGR01923 menE O-succinylbenzo 100.0 1.5E-60 3.3E-65 486.2 42.1 436 41-541 1-436 (436)
113 KOG1180 Acyl-CoA synthetase [L 100.0 9E-61 2E-65 450.6 31.7 525 12-555 39-677 (678)
114 PRK08308 acyl-CoA synthetase; 100.0 1.4E-57 3.1E-62 459.8 46.0 406 32-541 1-407 (414)
115 PRK07768 long-chain-fatty-acid 100.0 6.4E-58 1.4E-62 479.6 44.8 493 15-546 3-544 (545)
116 KOG1179 Very long-chain acyl-C 100.0 2.4E-57 5.2E-62 429.5 39.1 508 10-544 73-610 (649)
117 PF00501 AMP-binding: AMP-bind 100.0 2.4E-56 5.2E-61 452.6 29.7 397 20-450 1-417 (417)
118 TIGR01733 AA-adenyl-dom amino 100.0 9.9E-52 2.1E-56 417.8 36.9 394 41-474 1-408 (408)
119 PRK07824 O-succinylbenzoic aci 100.0 4.8E-48 1E-52 382.7 35.5 319 186-547 33-357 (358)
120 PTZ00297 pantothenate kinase; 100.0 1.6E-46 3.4E-51 412.0 42.9 485 9-554 422-1002(1452)
121 COG1020 EntF Non-ribosomal pep 100.0 9.1E-39 2E-43 341.2 40.1 407 13-467 226-642 (642)
122 TIGR02372 4_coum_CoA_lig 4-cou 100.0 7.2E-39 1.6E-43 314.5 28.1 288 188-537 95-386 (386)
123 TIGR02155 PA_CoA_ligase phenyl 100.0 1.4E-35 3.1E-40 299.3 28.7 320 186-539 73-418 (422)
124 KOG3628 Predicted AMP-binding 100.0 3.6E-33 7.7E-38 281.9 36.5 516 14-554 770-1358(1363)
125 KOG1178 Non-ribosomal peptide 100.0 1.2E-31 2.7E-36 279.9 24.6 501 14-550 36-582 (1032)
126 TIGR03335 F390_ftsA coenzyme F 100.0 5.5E-28 1.2E-32 243.9 28.7 319 186-538 84-440 (445)
127 COG1541 PaaK Coenzyme F390 syn 100.0 2.6E-27 5.6E-32 225.7 26.4 321 185-538 87-430 (438)
128 TIGR03089 conserved hypothetic 99.9 1.1E-25 2.5E-30 204.6 21.8 218 20-278 2-227 (227)
129 PRK09188 serine/threonine prot 99.9 1.4E-21 3E-26 187.8 14.3 117 420-547 208-328 (365)
130 KOG3628 Predicted AMP-binding 99.9 8.5E-20 1.8E-24 185.9 23.6 509 6-551 86-708 (1363)
131 TIGR02304 aden_form_hyp probab 99.8 2.8E-16 6.1E-21 154.9 26.4 254 189-492 100-377 (430)
132 PF13193 AMP-binding_C: AMP-bi 99.3 5.2E-12 1.1E-16 92.5 5.2 70 458-535 1-73 (73)
133 PF04443 LuxE: Acyl-protein sy 98.8 5.1E-07 1.1E-11 87.5 18.7 230 187-454 88-358 (365)
134 PF03321 GH3: GH3 auxin-respon 98.4 1.9E-05 4E-10 81.4 17.6 177 299-513 266-467 (528)
135 PLN02247 indole-3-acetic acid- 97.7 0.007 1.5E-07 62.4 21.2 44 423-466 417-464 (606)
136 PLN02249 indole-3-acetic acid- 97.6 0.0034 7.4E-08 65.1 17.5 43 423-465 410-456 (597)
137 PF14535 AMP-binding_C_2: AMP- 97.5 0.00012 2.6E-09 56.5 4.6 84 451-538 1-91 (96)
138 PLN02620 indole-3-acetic acid- 97.3 0.018 3.9E-07 59.4 17.7 43 423-465 423-469 (612)
139 COG1541 PaaK Coenzyme F390 syn 95.6 0.11 2.5E-06 51.2 10.7 93 39-132 109-203 (438)
140 TIGR03335 F390_ftsA coenzyme F 87.5 4.3 9.3E-05 41.5 10.1 83 39-124 105-189 (445)
141 TIGR02155 PA_CoA_ligase phenyl 87.4 4 8.6E-05 41.4 9.9 89 39-128 94-184 (422)
142 PRK07656 long-chain-fatty-acid 79.9 17 0.00036 37.8 11.1 86 38-127 184-271 (513)
143 TIGR03089 conserved hypothetic 78.0 13 0.00028 33.9 8.3 55 57-113 171-227 (227)
144 PRK06187 long-chain-fatty-acid 75.1 23 0.00049 36.8 10.4 85 39-127 186-271 (521)
145 PRK06334 long chain fatty acid 71.0 61 0.0013 34.0 12.5 98 27-127 181-289 (539)
146 PRK08315 AMP-binding domain pr 66.9 48 0.001 34.9 10.8 83 38-123 217-301 (559)
147 PRK02261 methylaspartate mutas 66.6 32 0.0007 28.3 7.3 102 229-333 4-119 (137)
148 PLN02736 long-chain acyl-CoA s 64.3 1.2E+02 0.0026 32.7 13.3 100 206-308 77-180 (651)
149 PLN02565 cysteine synthase 64.2 73 0.0016 30.8 10.4 73 48-120 49-122 (322)
150 PF00501 AMP-binding: AMP-bind 63.6 52 0.0011 32.9 9.9 88 186-282 8-99 (417)
151 PRK12583 acyl-CoA synthetase; 63.5 58 0.0013 34.2 10.6 82 38-122 219-302 (558)
152 PRK10696 tRNA 2-thiocytidine b 62.7 76 0.0016 29.5 9.9 80 40-119 3-95 (258)
153 TIGR03098 ligase_PEP_1 acyl-Co 60.1 52 0.0011 34.1 9.4 85 38-126 179-264 (515)
154 TIGR03590 PseG pseudaminic aci 58.2 1.1E+02 0.0024 28.8 10.4 99 38-148 10-113 (279)
155 TIGR01733 AA-adenyl-dom amino 57.1 89 0.0019 31.1 10.3 98 28-128 119-228 (408)
156 KOG0023 Alcohol dehydrogenase, 57.0 66 0.0014 30.7 8.0 75 55-132 173-247 (360)
157 TIGR01923 menE O-succinylbenzo 55.1 40 0.00086 34.1 7.4 82 38-125 129-211 (436)
158 PRK11761 cysM cysteine synthas 54.8 1.2E+02 0.0026 28.9 10.0 87 30-119 28-117 (296)
159 PRK04319 acetyl-CoA synthetase 54.2 95 0.0021 32.8 10.3 96 28-126 204-310 (570)
160 COG0399 WecE Predicted pyridox 52.8 51 0.0011 32.5 7.1 65 49-117 59-128 (374)
161 TIGR01139 cysK cysteine syntha 52.6 1.4E+02 0.0031 28.4 10.2 91 30-121 22-113 (298)
162 PLN03051 acyl-activating enzym 52.1 69 0.0015 33.2 8.7 85 38-125 137-222 (499)
163 KOG1177 Long chain fatty acid 51.2 94 0.002 31.5 8.5 104 205-309 75-198 (596)
164 PLN03013 cysteine synthase 50.9 1.5E+02 0.0032 30.0 10.1 65 56-120 165-230 (429)
165 PLN02550 threonine dehydratase 50.4 2.1E+02 0.0046 30.3 11.5 109 14-127 109-219 (591)
166 PLN03052 acetate--CoA ligase; 49.1 1.6E+02 0.0035 32.4 11.1 98 187-286 189-290 (728)
167 PRK08316 acyl-CoA synthetase; 48.6 1.2E+02 0.0027 31.3 10.0 84 38-125 189-274 (523)
168 PRK03640 O-succinylbenzoic aci 48.4 92 0.002 31.9 8.9 84 39-126 160-244 (483)
169 TIGR01136 cysKM cysteine synth 48.1 1.7E+02 0.0038 27.8 10.0 72 48-120 41-113 (299)
170 PLN02387 long-chain-fatty-acid 47.9 1.7E+02 0.0036 32.0 11.1 103 205-310 104-210 (696)
171 PLN02860 o-succinylbenzoate-Co 47.3 1.3E+02 0.0029 31.6 10.1 97 27-127 170-276 (563)
172 TIGR02370 pyl_corrinoid methyl 47.2 86 0.0019 27.7 7.2 94 227-320 83-185 (197)
173 PLN02556 cysteine synthase/L-3 46.9 1.2E+02 0.0025 30.1 8.7 62 58-119 103-165 (368)
174 PLN02614 long-chain acyl-CoA s 46.9 4E+02 0.0086 28.9 13.7 85 206-291 78-166 (666)
175 cd01445 TST_Repeats Thiosulfat 46.8 54 0.0012 27.0 5.5 43 50-92 81-126 (138)
176 PRK05620 long-chain-fatty-acid 46.7 2.8E+02 0.0061 29.3 12.4 88 38-126 199-287 (576)
177 PRK07638 acyl-CoA synthetase; 46.4 1.2E+02 0.0027 31.1 9.5 86 38-127 161-247 (487)
178 PRK06164 acyl-CoA synthetase; 46.0 1.3E+02 0.0029 31.4 9.8 96 28-127 180-285 (540)
179 PTZ00237 acetyl-CoA synthetase 45.6 1.9E+02 0.004 31.3 10.9 78 206-284 91-172 (647)
180 KOG1176 Acyl-CoA synthetase [L 45.6 1.2E+02 0.0026 31.8 8.8 87 205-292 43-135 (537)
181 cd00640 Trp-synth-beta_II Tryp 45.5 2.4E+02 0.0051 25.8 10.2 68 55-123 41-108 (244)
182 PRK08308 acyl-CoA synthetase; 45.5 2.1E+02 0.0046 28.6 10.8 84 38-125 119-204 (414)
183 PRK06188 acyl-CoA synthetase; 45.5 1.7E+02 0.0037 30.4 10.4 84 39-126 187-270 (524)
184 TIGR02262 benz_CoA_lig benzoat 45.3 2.2E+02 0.0047 29.5 11.2 95 28-124 160-265 (508)
185 TIGR02379 ECA_wecE TDP-4-keto- 45.2 78 0.0017 31.4 7.3 58 56-117 63-125 (376)
186 PRK09274 peptide synthase; Pro 44.8 1.4E+02 0.0031 31.3 9.8 97 187-284 20-121 (552)
187 PRK06381 threonine synthase; V 44.6 2.2E+02 0.0047 27.4 10.2 108 11-124 12-122 (319)
188 PRK13295 cyclohexanecarboxylat 44.4 3.1E+02 0.0068 28.7 12.3 95 28-126 196-301 (547)
189 PRK07470 acyl-CoA synthetase; 44.2 2.5E+02 0.0054 29.2 11.4 99 28-127 162-270 (528)
190 PRK06382 threonine dehydratase 44.0 1.6E+02 0.0034 29.7 9.4 56 69-124 77-132 (406)
191 KOG1250 Threonine/serine dehyd 43.8 1.4E+02 0.0031 29.3 8.3 58 69-126 118-175 (457)
192 cd06448 L-Ser-dehyd Serine deh 43.7 2.2E+02 0.0047 27.5 10.0 61 59-120 46-106 (316)
193 PTZ00342 acyl-CoA synthetase; 43.6 2.1E+02 0.0046 31.5 11.0 117 187-310 75-209 (746)
194 COG1167 ARO8 Transcriptional r 42.7 3.6E+02 0.0079 27.6 11.9 60 61-121 176-236 (459)
195 cd01561 CBS_like CBS_like: Thi 42.1 2.4E+02 0.0052 26.7 10.0 66 55-121 43-109 (291)
196 PRK07788 acyl-CoA synthetase; 41.7 1.7E+02 0.0036 30.7 9.7 85 39-127 226-311 (549)
197 PRK07476 eutB threonine dehydr 41.0 1.8E+02 0.0039 28.1 9.0 56 69-124 71-126 (322)
198 cd07050 BMC_EutL_repeat2 ethan 40.5 51 0.0011 23.9 3.6 42 53-94 3-45 (87)
199 PLN00011 cysteine synthase 40.4 1.8E+02 0.004 28.1 8.9 67 53-120 56-124 (323)
200 PRK06155 crotonobetaine/carnit 39.8 1.5E+02 0.0031 31.2 8.9 85 207-292 46-134 (542)
201 TIGR02275 DHB_AMP_lig 2,3-dihy 39.8 3.2E+02 0.007 28.4 11.5 96 27-126 181-288 (527)
202 PLN02654 acetate-CoA ligase 39.7 2.6E+02 0.0056 30.3 10.9 80 205-285 118-201 (666)
203 PRK03584 acetoacetyl-CoA synth 39.2 2.6E+02 0.0056 30.2 10.9 94 187-285 98-195 (655)
204 PRK11706 TDP-4-oxo-6-deoxy-D-g 39.2 1.3E+02 0.0028 29.8 7.9 56 58-117 65-125 (375)
205 COG4009 Uncharacterized protei 39.2 1.3E+02 0.0029 21.7 5.5 66 38-114 8-76 (88)
206 PRK06839 acyl-CoA synthetase; 39.1 4E+02 0.0087 27.3 12.0 96 28-127 148-254 (496)
207 COG1064 AdhP Zn-dependent alco 38.8 1.4E+02 0.003 29.0 7.5 61 55-119 158-218 (339)
208 TIGR02188 Ac_CoA_lig_AcsA acet 38.5 2.5E+02 0.0055 30.0 10.6 96 186-285 70-169 (625)
209 PLN03102 acyl-activating enzym 38.4 1.3E+02 0.0028 31.9 8.3 82 207-289 39-124 (579)
210 PLN02246 4-coumarate--CoA liga 37.9 2.2E+02 0.0047 29.8 9.9 84 206-290 49-136 (537)
211 PRK00174 acetyl-CoA synthetase 37.5 2.6E+02 0.0056 30.1 10.5 95 187-285 81-179 (637)
212 COG1171 IlvA Threonine dehydra 37.3 2.5E+02 0.0054 27.4 8.9 113 13-129 24-138 (347)
213 PRK10717 cysteine synthase A; 37.3 2.1E+02 0.0046 27.7 8.9 64 56-120 55-119 (330)
214 COG5012 Predicted cobalamin bi 37.0 1.7E+02 0.0036 26.4 7.1 59 262-320 141-205 (227)
215 PRK07008 long-chain-fatty-acid 36.9 1.5E+02 0.0033 31.0 8.4 86 39-126 195-282 (539)
216 PRK08633 2-acyl-glycerophospho 36.9 3.2E+02 0.007 31.8 11.9 97 27-126 780-887 (1146)
217 PRK07529 AMP-binding domain pr 36.6 2.4E+02 0.0052 30.3 10.0 96 186-284 38-137 (632)
218 PRK06702 O-acetylhomoserine am 36.3 1.9E+02 0.0041 29.4 8.5 51 69-119 80-133 (432)
219 PF02729 OTCace_N: Aspartate/o 36.3 2.5E+02 0.0054 23.3 11.2 88 44-132 16-115 (142)
220 PRK08043 bifunctional acyl-[ac 36.3 2.3E+02 0.0051 31.0 10.0 91 28-121 364-465 (718)
221 cd01449 TST_Repeat_2 Thiosulfa 35.8 88 0.0019 24.6 5.1 41 50-90 64-104 (118)
222 TIGR01217 ac_ac_CoA_syn acetoa 35.5 3.2E+02 0.0069 29.5 10.8 79 206-285 113-195 (652)
223 PRK05852 acyl-CoA synthetase; 35.2 2.6E+02 0.0056 29.2 9.9 87 38-127 194-283 (534)
224 PRK10946 entE enterobactin syn 35.1 3.7E+02 0.008 28.0 11.1 86 38-127 200-288 (536)
225 PF09269 DUF1967: Domain of un 34.8 52 0.0011 23.3 3.1 30 40-69 33-62 (69)
226 PRK11658 UDP-4-amino-4-deoxy-L 34.4 1.6E+02 0.0035 29.2 7.7 61 52-116 61-126 (379)
227 TIGR01138 cysM cysteine syntha 34.4 2E+02 0.0043 27.3 8.0 89 30-119 24-113 (290)
228 PRK11493 sseA 3-mercaptopyruva 33.5 78 0.0017 29.9 5.0 52 39-90 201-257 (281)
229 PRK05857 acyl-CoA synthetase; 33.4 2.4E+02 0.0052 29.5 9.3 80 206-286 40-123 (540)
230 cd02069 methionine_synthase_B1 33.0 2.2E+02 0.0049 25.5 7.6 90 229-320 89-187 (213)
231 COG0031 CysK Cysteine synthase 33.0 3E+02 0.0066 26.2 8.6 68 51-119 44-116 (300)
232 PRK12483 threonine dehydratase 33.0 2.8E+02 0.0061 29.0 9.2 61 69-129 89-149 (521)
233 PLN02356 phosphateglycerate ki 32.8 2.7E+02 0.0058 28.2 8.7 68 50-118 89-157 (423)
234 TIGR03588 PseC UDP-4-keto-6-de 32.7 2.1E+02 0.0045 28.4 8.2 65 50-117 55-127 (380)
235 PF09580 Spore_YhcN_YlaJ: Spor 32.7 1E+02 0.0022 26.7 5.3 25 456-480 77-101 (177)
236 TIGR01734 D-ala-DACP-lig D-ala 32.7 3.2E+02 0.007 28.1 10.1 85 38-125 159-246 (502)
237 PRK08813 threonine dehydratase 32.6 3.5E+02 0.0077 26.5 9.4 58 68-125 84-141 (349)
238 COG4821 Uncharacterized protei 32.6 1.4E+02 0.0031 26.3 5.7 57 43-120 83-140 (243)
239 PLN02861 long-chain-fatty-acid 32.3 2.9E+02 0.0062 29.9 9.8 85 206-291 76-164 (660)
240 TIGR03208 cyc_hxne_CoA_lg cycl 32.2 6E+02 0.013 26.4 12.2 96 27-126 193-299 (538)
241 PRK07798 acyl-CoA synthetase; 32.1 3.8E+02 0.0083 27.7 10.6 85 206-291 27-115 (533)
242 PLN02430 long-chain-fatty-acid 32.1 6.8E+02 0.015 27.1 13.4 101 206-308 75-179 (660)
243 PF01041 DegT_DnrJ_EryC1: DegT 32.1 1.4E+02 0.0031 29.4 6.8 89 16-118 26-120 (363)
244 PRK08526 threonine dehydratase 32.0 3.4E+02 0.0074 27.3 9.5 60 69-128 72-131 (403)
245 PRK13388 acyl-CoA synthetase; 31.8 3.7E+02 0.008 28.1 10.4 83 207-290 26-113 (540)
246 TIGR00936 ahcY adenosylhomocys 31.6 5.5E+02 0.012 25.8 10.6 69 55-123 23-93 (406)
247 PRK04813 D-alanine--poly(phosp 31.5 5.2E+02 0.011 26.4 11.4 85 38-125 161-248 (503)
248 cd01519 RHOD_HSP67B2 Member of 31.4 1.1E+02 0.0024 23.4 4.9 51 40-90 38-92 (106)
249 TIGR01137 cysta_beta cystathio 31.4 2.7E+02 0.0058 28.5 9.0 67 52-119 49-116 (454)
250 PRK08008 caiC putative crotono 31.4 3.3E+02 0.0071 28.2 9.9 83 207-290 37-123 (517)
251 PRK05677 long-chain-fatty-acid 31.3 3E+02 0.0065 29.0 9.6 82 206-288 48-134 (562)
252 TIGR01127 ilvA_1Cterm threonin 31.0 2.9E+02 0.0064 27.4 8.9 59 68-126 51-109 (380)
253 PRK05605 long-chain-fatty-acid 30.9 2.1E+02 0.0046 30.1 8.5 83 207-290 57-143 (573)
254 cd02070 corrinoid_protein_B12- 30.8 3.8E+02 0.0082 23.7 10.3 88 229-316 83-179 (201)
255 PLN02574 4-coumarate--CoA liga 30.7 3.8E+02 0.0082 28.2 10.3 84 207-291 66-154 (560)
256 PRK05850 acyl-CoA synthetase; 30.7 5.2E+02 0.011 27.2 11.4 83 206-290 34-123 (578)
257 PRK08314 long-chain-fatty-acid 30.6 2.2E+02 0.0047 29.8 8.4 84 207-291 35-123 (546)
258 COG0318 CaiC Acyl-CoA syntheta 30.5 3.9E+02 0.0084 28.0 10.2 97 27-124 169-277 (534)
259 PRK08279 long-chain-acyl-CoA s 30.4 3.4E+02 0.0074 28.9 10.0 81 38-122 217-299 (600)
260 TIGR02316 propion_prpE propion 30.2 2.5E+02 0.0055 30.1 8.9 94 187-284 66-163 (628)
261 PF03744 BioW: 6-carboxyhexano 30.0 87 0.0019 28.5 4.4 38 391-443 174-221 (239)
262 COG1022 FAA1 Long-chain acyl-C 29.9 3E+02 0.0064 29.5 8.9 100 26-129 188-297 (613)
263 cd01563 Thr-synth_1 Threonine 29.9 1.9E+02 0.004 28.0 7.2 104 15-124 23-129 (324)
264 PF01276 OKR_DC_1: Orn/Lys/Arg 29.9 5.8E+02 0.013 25.7 10.5 58 61-121 103-179 (417)
265 PRK15407 lipopolysaccharide bi 29.9 2.3E+02 0.0049 28.9 8.0 55 60-118 107-166 (438)
266 COG2236 Predicted phosphoribos 29.9 85 0.0018 27.6 4.2 33 38-70 5-37 (192)
267 cd01562 Thr-dehyd Threonine de 29.7 2.3E+02 0.005 27.0 7.7 59 65-124 66-124 (304)
268 TIGR03595 Obg_CgtA_exten Obg f 29.1 68 0.0015 22.7 2.9 19 52-70 45-63 (69)
269 PRK07514 malonyl-CoA synthase; 29.0 2.9E+02 0.0062 28.4 8.9 84 206-290 27-114 (504)
270 TIGR02372 4_coum_CoA_lig 4-cou 28.9 5.9E+02 0.013 25.3 12.7 107 13-125 79-198 (386)
271 PRK15400 lysine decarboxylase 28.8 1.4E+02 0.003 32.5 6.3 59 61-122 232-309 (714)
272 PRK13383 acyl-CoA synthetase; 28.6 2.7E+02 0.0059 28.8 8.7 84 207-291 60-147 (516)
273 PRK08276 long-chain-fatty-acid 28.0 3.2E+02 0.007 28.1 9.1 83 207-290 11-97 (502)
274 PLN02330 4-coumarate--CoA liga 27.8 3.1E+02 0.0066 28.7 9.0 83 206-289 54-140 (546)
275 PRK09224 threonine dehydratase 27.3 4.2E+02 0.0092 27.6 9.5 60 69-128 72-131 (504)
276 PF07994 NAD_binding_5: Myo-in 27.3 3.8E+02 0.0082 25.5 8.3 71 41-113 127-227 (295)
277 PTZ00216 acyl-CoA synthetase; 27.0 5.1E+02 0.011 28.3 10.7 88 204-292 118-209 (700)
278 PRK06087 short chain acyl-CoA 26.7 5.2E+02 0.011 27.0 10.5 78 39-120 206-285 (547)
279 PRK10877 protein disulfide iso 26.6 4.7E+02 0.01 23.8 8.7 48 426-478 55-105 (232)
280 PRK09088 acyl-CoA synthetase; 26.5 4.8E+02 0.01 26.7 10.0 77 207-284 22-102 (488)
281 PRK10595 SOS cell division inh 26.3 2.6E+02 0.0057 23.9 6.3 36 54-89 71-106 (164)
282 TIGR02035 D_Ser_am_lyase D-ser 26.2 2.6E+02 0.0057 28.3 7.5 63 67-129 154-216 (431)
283 PRK10524 prpE propionyl-CoA sy 26.0 5.8E+02 0.013 27.3 10.8 94 187-284 67-164 (629)
284 PF01037 AsnC_trans_reg: AsnC 26.0 1.3E+02 0.0028 21.1 4.1 47 454-512 10-56 (74)
285 PRK07787 acyl-CoA synthetase; 26.0 3.4E+02 0.0075 27.6 8.8 83 39-126 147-231 (471)
286 PRK08638 threonine dehydratase 25.9 3.8E+02 0.0082 26.1 8.4 58 68-125 78-135 (333)
287 TIGR01747 diampropi_NH3ly diam 25.7 6.7E+02 0.014 24.9 12.6 111 13-124 21-153 (376)
288 PRK08162 acyl-CoA synthetase; 25.5 2.7E+02 0.0059 29.1 8.1 83 207-290 43-129 (545)
289 PRK08751 putative long-chain f 25.4 2.9E+02 0.0063 29.0 8.3 82 207-289 50-136 (560)
290 PRK08246 threonine dehydratase 25.3 5.1E+02 0.011 24.8 9.2 61 63-124 67-127 (310)
291 cd06447 D-Ser-dehyd D-Serine d 25.3 2.9E+02 0.0063 27.8 7.6 61 67-127 136-196 (404)
292 PLN02723 3-mercaptopyruvate su 25.3 1.4E+02 0.003 28.9 5.3 53 40-92 239-297 (320)
293 PRK05638 threonine synthase; V 25.0 2.4E+02 0.0052 28.7 7.2 61 65-126 113-173 (442)
294 PF06564 YhjQ: YhjQ protein; 25.0 5.5E+02 0.012 23.7 9.5 98 19-117 67-171 (243)
295 KOG1179 Very long-chain acyl-C 24.9 3E+02 0.0066 28.7 7.4 74 39-117 261-337 (649)
296 PF00291 PALP: Pyridoxal-phosp 24.9 3.7E+02 0.008 25.4 8.3 56 64-120 56-111 (306)
297 TIGR03443 alpha_am_amid L-amin 24.7 3.8E+02 0.0082 32.2 9.8 98 186-284 249-350 (1389)
298 PF09153 DUF1938: Domain of un 24.5 1.7E+02 0.0036 21.5 4.1 31 31-61 16-53 (86)
299 COG0036 Rpe Pentose-5-phosphat 24.4 5E+02 0.011 23.4 7.9 81 65-147 86-177 (220)
300 cd01019 ZnuA Zinc binding prot 24.4 4.3E+02 0.0092 25.0 8.3 90 41-130 155-247 (286)
301 TIGR02898 spore_YhcN_YlaJ spor 24.3 2.5E+02 0.0054 23.8 5.9 25 456-480 56-80 (158)
302 cd02069 methionine_synthase_B1 24.3 5.2E+02 0.011 23.2 11.2 86 35-120 50-148 (213)
303 TIGR02304 aden_form_hyp probab 24.3 7.1E+02 0.015 25.3 10.2 69 59-130 138-206 (430)
304 PRK07059 Long-chain-fatty-acid 24.1 3.4E+02 0.0075 28.4 8.5 83 206-289 47-133 (557)
305 PRK06110 hypothetical protein; 24.0 6.6E+02 0.014 24.2 9.8 61 68-128 73-133 (322)
306 PRK05939 hypothetical protein; 23.8 3.2E+02 0.007 27.3 7.7 13 107-119 106-118 (397)
307 PRK13391 acyl-CoA synthetase; 23.3 5.6E+02 0.012 26.4 9.9 95 187-289 11-109 (511)
308 PF01297 TroA: Periplasmic sol 23.3 2.5E+02 0.0054 25.9 6.5 88 41-129 126-217 (256)
309 PF10411 DsbC_N: Disulfide bon 23.1 77 0.0017 21.4 2.2 19 425-443 32-50 (57)
310 COG2885 OmpA Outer membrane pr 23.0 2.3E+02 0.005 24.7 5.9 58 12-70 97-160 (190)
311 PRK06814 acylglycerophosphoeth 22.9 6.9E+02 0.015 29.2 11.3 95 27-124 791-896 (1140)
312 cd00754 MoaD Ubiquitin domain 22.8 2.2E+02 0.0047 20.4 4.8 45 13-72 25-76 (80)
313 PRK02261 methylaspartate mutas 22.5 4.4E+02 0.0096 21.7 8.2 42 78-119 21-62 (137)
314 PRK07786 long-chain-fatty-acid 22.4 6.3E+02 0.014 26.3 10.1 86 39-127 193-281 (542)
315 PRK06815 hypothetical protein; 22.3 6.9E+02 0.015 24.0 9.5 55 69-123 72-126 (317)
316 PLN02970 serine racemase 22.3 5.9E+02 0.013 24.6 9.1 55 69-123 79-133 (328)
317 PRK07409 threonine synthase; V 22.3 3.2E+02 0.007 26.8 7.3 56 68-123 81-137 (353)
318 cd00615 Orn_deC_like Ornithine 22.3 3.2E+02 0.007 25.8 7.2 55 61-118 96-161 (294)
319 TIGR02080 O_succ_thio_ly O-suc 22.2 4.3E+02 0.0093 26.3 8.2 49 70-118 71-122 (382)
320 TIGR02991 ectoine_eutB ectoine 22.0 5.2E+02 0.011 24.9 8.5 54 70-123 72-125 (317)
321 PRK09162 hypoxanthine-guanine 22.0 2.4E+02 0.0053 24.5 5.7 47 37-84 14-60 (181)
322 PRK08574 cystathionine gamma-s 21.9 4.1E+02 0.0088 26.5 8.0 12 41-52 54-65 (385)
323 PF00036 EF-hand_1: EF hand; 21.9 95 0.0021 17.5 2.1 20 528-547 9-28 (29)
324 PRK13382 acyl-CoA synthetase; 21.8 4.7E+02 0.01 27.3 9.0 81 207-288 68-152 (537)
325 PRK15399 lysine decarboxylase 21.7 2.1E+02 0.0046 31.1 6.1 47 61-110 232-292 (713)
326 PRK14057 epimerase; Provisiona 21.3 5.3E+02 0.011 23.9 7.8 55 64-118 99-163 (254)
327 PF00818 Ice_nucleation: Ice n 21.2 42 0.0009 16.0 0.4 9 330-338 1-9 (16)
328 PRK06145 acyl-CoA synthetase; 21.0 7.4E+02 0.016 25.3 10.2 85 38-126 167-253 (497)
329 cd02070 corrinoid_protein_B12- 20.7 5.9E+02 0.013 22.5 10.7 85 35-119 46-141 (201)
330 cd01137 PsaA Metal binding pro 20.7 5.7E+02 0.012 24.1 8.4 86 42-127 152-242 (287)
331 PRK13237 tyrosine phenol-lyase 20.6 5.2E+02 0.011 26.4 8.3 68 39-111 77-174 (460)
332 PRK14185 bifunctional 5,10-met 20.5 6.4E+02 0.014 24.0 8.4 70 43-112 11-86 (293)
333 PRK12476 putative fatty-acid-- 20.3 1.1E+03 0.023 25.2 11.6 83 206-289 67-155 (612)
334 PRK12582 acyl-CoA synthetase; 20.1 3.5E+02 0.0076 29.0 7.7 78 206-284 79-165 (624)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2.8e-83 Score=638.17 Aligned_cols=520 Identities=43% Similarity=0.682 Sum_probs=449.9
Q ss_pred CCCccCCCCCCCCCHHHHHHHHHHhcCCC-CEEEECC---ccccHHHHHHHHHHHHHHHHHcC--CCCCCEEEEEcCChH
Q 045072 2 DELKPCTANSSPLTPLGFLERAATVYGDC-PSIIYNN---LIYTWSQTHRRCLQLASSLSSIG--ITRGHVVSVVAPNIP 75 (556)
Q Consensus 2 ~~~~~~~~~~~~~t~~~~l~~~~~~~p~~-~a~~~~~---~~~Ty~~l~~~~~~la~~L~~~g--~~~gd~V~i~~~~~~ 75 (556)
+.+-..+.+..+.+....+.+.+..++++ +.+++.. +.+||+|++.++.|+|.+|.+.| +++||+|++++||++
T Consensus 4 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~ 83 (537)
T KOG1176|consen 4 EKLWKGPANNTPLTPITFLGRPAFVYLDRNTSLVYQDSDGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTP 83 (537)
T ss_pred cccccCcccCccccccccccccccccccCcceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCH
Confidence 44555667777778777777777677766 8887765 89999999999999999999876 899999999999999
Q ss_pred HHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCC
Q 045072 76 AMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNK 155 (556)
Q Consensus 76 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (556)
+++.++|||+++|+++.+++|.+.+.++.+.+++++++++|++.+....+.++...+. ..++.+........
T Consensus 84 ~~~~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~-----~~i~~l~~~~~~~~--- 155 (537)
T KOG1176|consen 84 EFVELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLA-----LKIIVLTGDEGVIS--- 155 (537)
T ss_pred HHHHHHHHHHHcCccccccCcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcC-----CceEEEecccCccc---
Confidence 9999999999999999999999999999999999999999999999998887766543 34455544311100
Q ss_pred CccccCCCcccc-cccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEE
Q 045072 156 SSQTVDSNFCCT-YESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLW 234 (556)
Q Consensus 156 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (556)
.. ....... +..++....+.. .++.+.+|++.++|||||||.||||++||++++.+.........+...++.++
T Consensus 156 -~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v~l~ 230 (537)
T KOG1176|consen 156 -IS--DLVEDLDAFEDLMPEGLPDG--IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDVYLC 230 (537)
T ss_pred -cc--cccccccchhhccccCCCcc--cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCceEEE
Confidence 00 0000111 445555554444 45577899999999999999999999999999988777777777888999999
Q ss_pred ecChhhhhhchhhhHhHhc-CcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCC
Q 045072 235 TLPMFHANGWSYPWGMAAV-GGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAP 311 (556)
Q Consensus 235 ~~pl~~~~g~~~~~~~~~~-g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~ 311 (556)
.+|++|.+|+..++.+.+. |+++++...+++..+++++++|++|+++++|..+..|.+.+. ..++++++.+.+||++
T Consensus 231 ~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~ 310 (537)
T KOG1176|consen 231 TLPLFHIYGLITLLLSLLAGGTTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAP 310 (537)
T ss_pred echHHHHhHHHHHHHHHHhCCceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCC
Confidence 9999999999998885555 555555567899999999999999999999999999999764 6889999999999999
Q ss_pred CcHHHHHHhH-hcC-CeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCC
Q 045072 312 PPAAVLFRTE-SLG-FLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDG 389 (556)
Q Consensus 312 ~~~~~~~~~~-~~~-~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~ 389 (556)
++++..+++. +++ ..+.+.||+||+++.++.+.+... +..+++|.++++. ...|.++ +|..++++
T Consensus 311 ~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e----------~k~~svG~~~~g~-~~~v~~e-~g~~l~~~- 377 (537)
T KOG1176|consen 311 LSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPE----------RKPGSVGRLLPGV-RVKVLDE-TGVSLGPN- 377 (537)
T ss_pred CCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCcc----------CcccccCccccce-EEEeeCC-CCCCCCCC-
Confidence 9999999988 666 899999999999988877653321 4568999999966 7777665 99999998
Q ss_pred CeeeEEEEecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCc
Q 045072 390 ASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAV 469 (556)
Q Consensus 390 ~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i 469 (556)
+.||||++|+.++.||++||+.|...|+++|||+|||+|++|+||+||+.+|++|+||.+|++|+|.|||++|..||.|
T Consensus 378 -~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG~l~IvdR~KdlIk~~G~qv~P~EiE~vL~~hP~V 456 (537)
T KOG1176|consen 378 -QTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDEDGYLYIVDRSKDLIKYGGEQVSPAEIEAVLLTHPDV 456 (537)
T ss_pred -CceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcCCCeEEEecchhhheeeCCEEeCHHHHHHHHHhCCCc
Confidence 6799999999999999999999999999779999999999999999999999999999999999999999999999999
Q ss_pred cccEEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHhc
Q 045072 470 NEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMG 549 (556)
Q Consensus 470 ~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~~ 549 (556)
.|++|++.+++.+|+.++|+|+.+++.. ..+++|.+++++++++|++|..++|+++||+|++||++|+.|++++.+..
T Consensus 457 ~eaaVvgipDe~~Ge~p~A~VV~k~g~~--lte~di~~~v~k~l~~y~~~~~V~Fvd~lPKs~~GKi~R~~lr~~~~~~~ 534 (537)
T KOG1176|consen 457 LEAAVVGIPDEVWGETPAAFVVLKKGST--LTEKDIIEYVRKKLPAYKLPGGVVFVDELPKTPNGKILRRKLRDIAKKLG 534 (537)
T ss_pred cEEEEEcccccccCCcceEEEEecCCCc--CCHHHHHHHHHhhCChhhccCeEEEeccCCCCCcchHHHHHHHHHHHhcc
Confidence 9999999999999999999999998655 89999999999999999999999999999999999999999999998765
Q ss_pred c
Q 045072 550 K 550 (556)
Q Consensus 550 ~ 550 (556)
.
T Consensus 535 ~ 535 (537)
T KOG1176|consen 535 S 535 (537)
T ss_pred c
Confidence 3
No 2
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=4e-81 Score=578.34 Aligned_cols=523 Identities=26% Similarity=0.364 Sum_probs=454.1
Q ss_pred CccCCCCCCCCCHHHHHHHHHHhcCCCCEEEEC--CccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHH
Q 045072 4 LKPCTANSSPLTPLGFLERAATVYGDCPSIIYN--NLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAH 81 (556)
Q Consensus 4 ~~~~~~~~~~~t~~~~l~~~~~~~p~~~a~~~~--~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~ 81 (556)
+++++.|....|+++.++..+++.||+.|+++. +-++||+||.+.++++|.+|.+.|+++||||++..||+.+|+..+
T Consensus 40 ~g~~~ipl~~~Tigq~l~~~t~~v~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~ 119 (596)
T KOG1177|consen 40 HGCSQIPLDSETIGQLLETTTERVPDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQ 119 (596)
T ss_pred CCCCCCCcccccHHHHHHHHhhccCcceEEEEeeccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHH
Confidence 456677999999999999999999999999985 467999999999999999999999999999999999999999999
Q ss_pred HHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEecc-----chhhHHHHHhcCCCCCC----------CCCeEEEcC
Q 045072 82 FAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQ-----SRNLVVEAISLFPSDIK----------CPPLVLIAD 146 (556)
Q Consensus 82 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~-----~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 146 (556)
|||+++|.+.+++||++..++++..|++.+++++|+-+. ..+.+.+...+...... ..+++..++
T Consensus 120 lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~e 199 (596)
T KOG1177|consen 120 LACARAGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADE 199 (596)
T ss_pred HHHHHhceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCC
Confidence 999999999999999999999999999999999998653 24444444444332221 123333332
Q ss_pred CCCCCCCCCCccccCCCcccccccccccCCCCCC----CC-CCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhh
Q 045072 147 HTDHDNDNKSSQTVDSNFCCTYESLVTKGDPNFK----WI-RPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSL 221 (556)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~ 221 (556)
+. ...+...+++++........ +. .-.++|+++.|.|||||||.|||+.+||.++++++....
T Consensus 200 d~------------~~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg 267 (596)
T KOG1177|consen 200 DH------------PLPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVG 267 (596)
T ss_pred CC------------cCCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHH
Confidence 21 12345666776665544211 11 125679999999999999999999999999999999998
Q ss_pred hhcCCCCCCEEEEecChhhhhhch-hhhHhHhcCcEeEEec-CCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CC
Q 045072 222 IDWSIPKQPVYLWTLPMFHANGWS-YPWGMAAVGGTNVCLR-KFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SE 297 (556)
Q Consensus 222 ~~~~~~~~~~~~~~~pl~~~~g~~-~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~ 297 (556)
..+++...+++.+..|++|.+|.. ..+.++..|++++++. .+++...+++|.++++|.++++|+++.-+++.+. ..
T Consensus 268 ~r~g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~ 347 (596)
T KOG1177|consen 268 ARAGYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQV 347 (596)
T ss_pred HHhCcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccC
Confidence 899999999999999999999955 4778888999999965 5999999999999999999999999999998887 67
Q ss_pred CCCCCeEEEEeCCCCcHHHHHHhH-hcCC-eEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeE
Q 045072 298 PLRNPVHILTAGAPPPAAVLFRTE-SLGF-LVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEID 375 (556)
Q Consensus 298 ~l~~l~~v~~~g~~~~~~~~~~~~-~~~~-~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 375 (556)
+++++|.++.||+++|+++.+.+. +.++ .+...||+||++...+.... .+.......++|..++.. +..
T Consensus 348 ~~s~lr~~vigGa~~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~--------~D~~~~~~ksVG~~m~h~-Ea~ 418 (596)
T KOG1177|consen 348 DLSSLRKGVIGGAPVSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLL--------GDPPEERIKSVGHLMDHY-EAA 418 (596)
T ss_pred chhhhhhheeCCCCCCHHHHHHHHHhhCceeeEEEeeccccCcceeeecC--------CCCHHHHHhhhhhccccc-ccc
Confidence 888999999999999999999887 4555 48899999999988776542 223334446899999999 999
Q ss_pred EecCCCCceecCCCCeeeEEEEecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeC
Q 045072 376 VIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLS 455 (556)
Q Consensus 376 i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~ 455 (556)
|+|. .|..++.+ ..|||+++|.+.|.|||++++.+......|.||+|||+|.+|++|.+.++||++|+|+-+|++|+
T Consensus 419 iv~~-~g~~v~~~--~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVy 495 (596)
T KOG1177|consen 419 IVDK-DGSEVPLG--TKGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVY 495 (596)
T ss_pred cccC-CCCccccC--CCceEEEEechhheeecCCcccchhhcccccceecCceEEEcCCCcEEEEEcccCeEEeCCcccC
Confidence 9995 89999998 56999999999999999999999999888999999999999999999999999999999999999
Q ss_pred hHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCC
Q 045072 456 SVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGK 535 (556)
Q Consensus 456 ~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GK 535 (556)
|.+||+.|.+||.|.++.|++++++..|+..+|+|.+.++.....+.++|+++|+.++..|++|++|++++++|+|.+||
T Consensus 496 P~ElE~fL~~hp~V~~a~VVGV~D~R~GE~VCA~vRLqe~~e~~~t~E~lKa~Ck~klaHFKiPky~vf~~~FPlT~tGK 575 (596)
T KOG1177|consen 496 PTELEDFLNKHPLVKEAHVVGVPDERLGEEVCACVRLQEGAEGKTTAETLKAMCKGKLAHFKIPKYFVFVDEFPLTTTGK 575 (596)
T ss_pred hHHHHHHHhhCCCeeeEEEEccCCCcccceEEEEEEeeccccccccHHHHHHHHhcccccccCCcEEEEeccCccccccc
Confidence 99999999999999999999999999999999999999987754689999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHhcc
Q 045072 536 IKKFELREMAKAMGK 550 (556)
Q Consensus 536 v~r~~l~~~~~~~~~ 550 (556)
|+|.++|+++..+..
T Consensus 576 IqKFeir~~~k~~l~ 590 (596)
T KOG1177|consen 576 IQKFEIREMSKGHLG 590 (596)
T ss_pred chhHHHHHHHHhhcc
Confidence 999999999986543
No 3
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.9e-76 Score=609.16 Aligned_cols=511 Identities=34% Similarity=0.513 Sum_probs=434.4
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCCEEEECCcc--ccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhh
Q 045072 8 TANSSPLTPLGFLERAATVYGDCPSIIYNNLI--YTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIP 85 (556)
Q Consensus 8 ~~~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~--~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~ 85 (556)
.......++.+.|.++++.+|+++|+.+.+.. +||+||.++++++|.+|++.|+++||+|+|+++|++++++++|||+
T Consensus 5 ~~~~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~ 84 (534)
T COG0318 5 MRMTAELTLASLLERAARRNPDRPALIFLGRGGRLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAAL 84 (534)
T ss_pred ccccccccHHHHHHHHHHhCCCceEEEEcCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 34566789999999999999999999998877 9999999999999999999999999999999999999999999999
Q ss_pred hccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcc
Q 045072 86 FTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFC 165 (556)
Q Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (556)
++|++++|++|.++..++.+++++++++.++++.+..+.........+ ....+.......... .
T Consensus 85 ~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-----------~- 148 (534)
T COG0318 85 RAGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALP----VVLVVLLVGDADDRL-----------P- 148 (534)
T ss_pred hcCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCC----cceEEEecccccccc-----------c-
Confidence 999999999999999999999999999999999885555554443321 111111111110000 0
Q ss_pred cccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcC--CCCCCEEEEecChhhhhh
Q 045072 166 CTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWS--IPKQPVYLWTLPMFHANG 243 (556)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~pl~~~~g 243 (556)
..+++.............+.+++++++++|||||||.||||++||++++.+.......+. +...|++++.+|++|.+|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~G 228 (534)
T COG0318 149 ITLEALAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFG 228 (534)
T ss_pred ccHHHHhhccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHH
Confidence 133444332222222222256889999999999999999999999999998888877777 899999999999999999
Q ss_pred chhhhHh-HhcCcEeEEec--CCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCCC--CCCCC-CeEEEEeCCCCcHHHH
Q 045072 244 WSYPWGM-AAVGGTNVCLR--KFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPRS--EPLRN-PVHILTAGAPPPAAVL 317 (556)
Q Consensus 244 ~~~~~~~-~~~g~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~--~~l~~-l~~v~~~g~~~~~~~~ 317 (556)
+...+.+ +..|+++++.+ .+++..++..+.++++|+++++|+++..+++.... ..+.+ +|.++.||++++++..
T Consensus 229 l~~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~~~lr~~~~gg~~~~~~~~ 308 (534)
T COG0318 229 LIVGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPELL 308 (534)
T ss_pred HHHHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccccccceEEEEecCCcCCHHHH
Confidence 9986665 77788888877 59999999999999999999999999999988763 33443 9999999999999999
Q ss_pred HHhH-hcC-CeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEE
Q 045072 318 FRTE-SLG-FLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEI 395 (556)
Q Consensus 318 ~~~~-~~~-~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel 395 (556)
+++. +++ ..+...||+||+++.++...... . ....+.+|.|.+++ +++|+|++++.+++ + +.|||
T Consensus 309 ~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~-~--------~~~~~~~G~~~pg~-~v~Ivd~~~~~~~p-g--~vGei 375 (534)
T COG0318 309 ERFEERFGPIAILEGYGLTETSPVVTINPPDD-L--------LAKPGSVGRPLPGV-EVRIVDPDGGEVLP-G--EVGEI 375 (534)
T ss_pred HHHHHHhCCCceEEeecccccCceeecCCCch-h--------hhcCCcccccCCCc-EEEEEeCCCCccCC-C--CceEE
Confidence 9998 666 47999999999997776654221 0 23345669999998 99999987775555 5 68999
Q ss_pred EEecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEE
Q 045072 396 VFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVV 475 (556)
Q Consensus 396 ~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~ 475 (556)
+++||+++.|||++|+.+...|.++|||+|||+|++|+||++++.||.+|+|+.+|++|+|.+||.++.+||.|.+++|+
T Consensus 376 ~irgp~v~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l~~~~~V~~aavv 455 (534)
T COG0318 376 WVRGPNVMKGYWNRPEATAEAFDEDGWLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEAVLAEHPAVAEAAVV 455 (534)
T ss_pred EEECchhhhhhcCChHHHHHhhccCCeeeecceEEEcCCccEEEEeccceEEEeCCeEECHHHHHHHHHhCCCcceEEEE
Confidence 99999999999999999998888569999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHH
Q 045072 476 ARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKA 547 (556)
Q Consensus 476 ~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 547 (556)
+++++.+|+.++++|+.+++.....+.+++.++++++++.+++|+.++++++||+|++||++|+.|++.+..
T Consensus 456 gvpd~~~Ge~~~a~v~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~v~~v~~lP~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 456 GVPDERWGERVVAVVVLKPGGDAELTAEELRAFLRKRLALYKVPRIVVFVDELPRTASGKIDRRALREEYRA 527 (534)
T ss_pred eCCCCccCceEEEEEEEcCCCCCCCCHHHHHHHHHhhhhcccCCeEEEEeCCCCCCCchhhhHHHHHHHHHh
Confidence 999999999999999998764322489999999999999999999999999999999999999999999887
No 4
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=1.8e-76 Score=585.94 Aligned_cols=492 Identities=28% Similarity=0.374 Sum_probs=416.7
Q ss_pred HHHHHHHh-cCCCCEEEECC-----ccccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCChHHHHHHHHHhhhccceE
Q 045072 19 FLERAATV-YGDCPSIIYNN-----LIYTWSQTHRRCLQLASSLSS-IGITRGHVVSVVAPNIPAMYEAHFAIPFTGAIL 91 (556)
Q Consensus 19 ~l~~~~~~-~p~~~a~~~~~-----~~~Ty~~l~~~~~~la~~L~~-~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 91 (556)
+++++... .+|+.|+++.+ +++||+||.+.++++|+.|++ .|+ +||||++++|+.+++++++|||+++|++.
T Consensus 14 ~~dr~~~~~~~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~riGAI~ 92 (528)
T COG0365 14 ALDRHLEADRPDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATARIGAIP 92 (528)
T ss_pred hhhhhhhccCCCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHHHcCCEE
Confidence 56666553 47899999975 579999999999999999997 678 99999999999999999999999999999
Q ss_pred eccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccccc
Q 045072 92 NNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESL 171 (556)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (556)
+++.+.++++.+++.+++++++++|+.+...............+.....++++.... ..|.+.
T Consensus 93 ~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~-----------------~~~~~~ 155 (528)
T COG0365 93 AVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLG-----------------LWYDEA 155 (528)
T ss_pred eecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEecccc-----------------ccHHHH
Confidence 999999999999999999999999998876543221110000000011133332221 456666
Q ss_pred cccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhh-hhcCCCCCCEEEEecChhhhhhchh-hhH
Q 045072 172 VTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSL-IDWSIPKQPVYLWTLPMFHANGWSY-PWG 249 (556)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~pl~~~~g~~~-~~~ 249 (556)
+.......+... .+.+|+++++|||||||+||||+++|++++....... ..+.+.++|++++..++.|++|... +++
T Consensus 156 ~~~~~~~~~~~~-~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~v~~ 234 (528)
T COG0365 156 VEKASEKFEFEP-LPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYSVFS 234 (528)
T ss_pred hhccCCCCCccc-cCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHHHHH
Confidence 665554444433 7889999999999999999999999998876665544 3567789999999999999999887 788
Q ss_pred hHhcCcEeEEec--CC-CHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHHHHhH-hc
Q 045072 250 MAAVGGTNVCLR--KF-DAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVLFRTE-SL 323 (556)
Q Consensus 250 ~~~~g~~~~~~~--~~-~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~~~~~-~~ 323 (556)
++..|++.++.. ++ ++..++++++++++|.+++.|+.++.|.+... +.++++||.+.+.|||++++..+++. .+
T Consensus 235 pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~dlssLr~~~SaGEPLnpe~~~w~~~~~ 314 (528)
T COG0365 235 PLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYDLSSLRVLGSAGEPLNPEAFEWFYSAL 314 (528)
T ss_pred HHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcccccchhheeeeccCCCCCHHHHHHHHHHh
Confidence 899999998885 23 49999999999999999999999999998863 67899999999999999999999998 56
Q ss_pred CCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecC--C
Q 045072 324 GFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGG--S 401 (556)
Q Consensus 324 ~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~--~ 401 (556)
|++|.+.||+||+|++..... + ....++.|.|.||+ ++.|+|++ |++++++ + |+|+++.+ +
T Consensus 315 g~~i~d~~gqTEtg~~~~~~~--------~----~~~~g~~g~p~pG~-~~~vvdd~-g~~~~~~--~-G~Lvi~~~~p~ 377 (528)
T COG0365 315 GVWILDIYGQTETGMGFIAGR--------P----PVKNGSSGLPLPGY-AVRRVDDE-GNPVPPG--V-GELVVRLPWPG 377 (528)
T ss_pred CCCEeccccccccCccccCCC--------C----CcCCCCCCCCCCCc-eeEEECCC-CCcCCCC--c-eEEEEeCCCch
Confidence 999999999999995544321 1 22334559999999 99999996 9999998 6 99999987 8
Q ss_pred ccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCC
Q 045072 402 MMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEF 481 (556)
Q Consensus 402 ~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~ 481 (556)
++++||+||+.+...+.+. ||.|||.+++|+||++++.||.||.|++.|.++.+.|||++|.+||.|.||+|++.+++.
T Consensus 378 ~~~~~w~d~er~~~~y~~~-~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~EvE~~l~~hP~VaEaAvVg~pd~~ 456 (528)
T COG0365 378 MALTYWNDPERYKEAYFGR-WYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLEIESVLLAHPAVAEAAVVGVPDPG 456 (528)
T ss_pred hhhhhhCCHHHHHHHHhhc-eeecCceeEEccCCCEEEEeeccceEeccCeeccHHHHHHHHHhCcceeeeEEEeccCCC
Confidence 9999999999888888734 999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHH
Q 045072 482 WGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKA 547 (556)
Q Consensus 482 ~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 547 (556)
.|+.++++|+++++.......++|.+++++.+.++..|+.+.+|++||||.|||+.|+.||+.+.+
T Consensus 457 kg~~v~afVvL~~g~~~~~L~~ei~~~vr~~~~~~~~p~~i~fv~~LPkT~sGKI~R~~lr~~~~~ 522 (528)
T COG0365 457 KGQIVLAFVVLAAGVEPNELAEEIRRHVARNIGPHAIPRKIRFVDELPKTASGKIQRRLLRKILHK 522 (528)
T ss_pred CCcEEEEEEEecCCCChHHHHHHHHHHHHhccCcccCCceEEEecCCCCCCcccHHHHHHHHHHhh
Confidence 999999999999986533457788888888888899999999999999999999999999999885
No 5
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6.8e-74 Score=518.27 Aligned_cols=505 Identities=26% Similarity=0.382 Sum_probs=445.8
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccc
Q 045072 10 NSSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGA 89 (556)
Q Consensus 10 ~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (556)
=|+.+|+.+.|.++|.++||++|+++.++++||++|.+++.++|.+|++.|+++||+|.+.+||..++++++||++++|+
T Consensus 24 yW~d~~l~d~L~~~A~~~pdriAv~d~~~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALlrlGv 103 (542)
T COG1021 24 YWQDRTLTDILTDHAARYPDRIAVIDGERRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALLRLGV 103 (542)
T ss_pred cccCCcHHHHHHHHHhhcCCceEEecCcccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHHHcCc
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeccCCCCCHHHHHHHHhccCCeEEEEecc-----chhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCc
Q 045072 90 ILNNINTRLDARTISVLLQHSESKLVLVDYQ-----SRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNF 164 (556)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (556)
.+|.-=|.....+|.++.+.++++.+|++.. ......+.....+. .+.+++. +....
T Consensus 104 ~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~t---lr~v~v~-ge~~~-------------- 165 (542)
T COG1021 104 APVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPT---LRHVIVA-GEAEH-------------- 165 (542)
T ss_pred chhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCc---ceEEEEc-cCCCC--------------
Confidence 9999989999999999999999999998763 23444445444442 2344444 33211
Q ss_pred ccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhc
Q 045072 165 CCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGW 244 (556)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~ 244 (556)
....+..+......+.+..+.+++++++++.+.||||.||.|+.+|.....+.+...+..++...++.++.+|..|.+.+
T Consensus 166 ~~~~~~~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AHNfpl 245 (542)
T COG1021 166 PSVLEAALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQTVYLCALPAAHNFPL 245 (542)
T ss_pred cchhhhhhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCccceEEEecccccCCCC
Confidence 02233334444444444456788899999999999999999999999998888888888999999999999999999998
Q ss_pred hh--hhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHHHHh
Q 045072 245 SY--PWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVLFRT 320 (556)
Q Consensus 245 ~~--~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~~~~ 320 (556)
+. .++.++.|+++++.++.+|+..+.+|+++++|+...+|.....++...+ ..++++||.+-+||+.++++..+++
T Consensus 246 ssPG~LGv~~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~LsSLrllQVGGarl~~~~Arrv 325 (542)
T COG1021 246 SSPGALGVFLAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERADLSSLRLLQVGGARLSATLARRV 325 (542)
T ss_pred CCcchhheeeeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCCchheeEEeecCcccCHHHHhhc
Confidence 75 7899999999999999999999999999999999999999888877665 7889999999999999999999999
Q ss_pred H-hcCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEec
Q 045072 321 E-SLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRG 399 (556)
Q Consensus 321 ~-~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~ 399 (556)
. .+|+.+-++|||.|.- +.+.. .++.........|+|+.+.-+++|+|. +|.++.+| |.|+|..+|
T Consensus 326 ~~~lgC~LQQVFGMAEGL-vnyTR---------LDDp~E~i~~TQGrPlsP~DEvrvvD~-dg~pv~pG--E~G~LltRG 392 (542)
T COG1021 326 PAVLGCQLQQVFGMAEGL-VNYTR---------LDDPPEIIIHTQGRPLSPDDEVRVVDA-DGNPVAPG--EVGELLTRG 392 (542)
T ss_pred hhhhCchHHHHhhhhhhh-hcccc---------cCCchHheeecCCCcCCCcceeEEecC-CCCCCCCC--CcceeeecC
Confidence 8 7799999999999953 33322 123334555688999888889999998 89999999 789999999
Q ss_pred CCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecC
Q 045072 400 GSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPD 479 (556)
Q Consensus 400 ~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~ 479 (556)
|+.++|||+.|+.....|..+|+|+|||+++.++||++.+.||.+|+|+-+|++|-.+|||+.|..||.|.+++++..++
T Consensus 393 PYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeEvEn~LL~HP~V~~AAlVampD 472 (542)
T COG1021 393 PYTIRGYYRAPEHNARAFDADGFYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEEVENLLLRHPAVHDAALVAMPD 472 (542)
T ss_pred CeeeeeeccCchhhhhccCcCCceecCceeEecCCceEEEEeeehhhhccccchhhHHHHHHHHhhCchhhhhhhhcCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeeeEEEEEecccccCCCCHHHHHHHHHhc-CCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHh
Q 045072 480 EFWGETPCAFLSLKAELEKKPTEKEIIEYCRAR-LPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAM 548 (556)
Q Consensus 480 ~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~-l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 548 (556)
+..|++.|++|+.++.. ....++++++++. +..|++|+++.+|+.+|.|+-|||+++.|++.+...
T Consensus 473 elLGEksCAfiv~~~~~---~~~~qlr~~L~~~GlAa~K~PDrie~v~~~P~T~VGKIdKk~Lr~~l~~~ 539 (542)
T COG1021 473 ELLGEKSCAFIVVKEPP---LRAAQLRRFLRERGLAAFKLPDRIEFVDSLPLTAVGKIDKKALRRRLASR 539 (542)
T ss_pred hhcCcceeEEEEecCCC---CCHHHHHHHHHHcchhhhcCCcceeecccCCCcccccccHHHHHHHhhhh
Confidence 99999999999998764 5788999999876 889999999999999999999999999999988754
No 6
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=1.5e-71 Score=583.38 Aligned_cols=528 Identities=27% Similarity=0.339 Sum_probs=424.1
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhcc
Q 045072 9 ANSSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTG 88 (556)
Q Consensus 9 ~~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (556)
++.++.++.++|++.++++|+++|++..++++||+||.++++++|.+|.+.|+++||+|+++++|++++++++|||+++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~G 81 (563)
T PLN02860 2 ANHSQAHICQCLTRLATLRGNAVVTISGNRRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACAG 81 (563)
T ss_pred cchhhhHHHHHHHHHHHhcCCceEEecCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhcc
Confidence 35678899999999999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred ceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHH-hcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccc
Q 045072 89 AILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAI-SLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCT 167 (556)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (556)
++++|+++.++.+++.++++++++++++++.+......... ...+. ...++...+..... ... ......
T Consensus 82 av~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~-----~~~--~~~~~~ 151 (563)
T PLN02860 82 GIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPS---LMWQVFLESPSSSV-----FIF--LNSFLT 151 (563)
T ss_pred EEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCc---eeEEEEecCccccc-----ccc--hhhccc
Confidence 99999999999999999999999999999887543332221 11111 11222222211000 000 000011
Q ss_pred cccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchhh
Q 045072 168 YESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSYP 247 (556)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~ 247 (556)
.+++...............++++++++|||||||.||+|.++|+++..+.......+++.++|+++..+|++|..++...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~ 231 (563)
T PLN02860 152 TEMLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 231 (563)
T ss_pred cchhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCCCCEEEEecCchhhccHHHH
Confidence 11111110000011112356899999999999999999999999998776666666788999999999999999999888
Q ss_pred hHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC----CCCCCCCeEEEEeCCCCcHHHHHHhHh-
Q 045072 248 WGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR----SEPLRNPVHILTAGAPPPAAVLFRTES- 322 (556)
Q Consensus 248 ~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----~~~l~~l~~v~~~g~~~~~~~~~~~~~- 322 (556)
+.++..|+++++.+.+++..+++.++++++|+++++|+++..+.+... ...++++|.+++||+++++.+.+.+++
T Consensus 232 ~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~ 311 (563)
T PLN02860 232 LAMLMVGACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKL 311 (563)
T ss_pred HHHHHcCceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHHh
Confidence 899999999999989999999999999999999999999999986543 345779999999999999999999884
Q ss_pred c-CCeEEecccccccccceeecccccc-ccCC-----------ChhhhccccccCccccceeeeeEEecCCCCceecCCC
Q 045072 323 L-GFLVSHGYGLTETAGLVVSCAWKNK-WNRL-----------PATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDG 389 (556)
Q Consensus 323 ~-~~~l~~~yG~tE~~~~~~~~~~~~~-~~~~-----------~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~ 389 (556)
+ ++.+++.||+||+++.+........ .... ..........++|.|.+++ +++|++++ ++
T Consensus 312 ~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~-~v~i~~~~------~g- 383 (563)
T PLN02860 312 FPNAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHV-ELKIGLDE------SS- 383 (563)
T ss_pred cCCCceecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCc-EEEEecCC------CC-
Confidence 4 7899999999999765543221110 0000 0000111223689999999 99999874 23
Q ss_pred CeeeEEEEecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCc
Q 045072 390 ASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAV 469 (556)
Q Consensus 390 ~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i 469 (556)
+.|||+++|+.++.|||++++.+...+..+|||+|||+|++++||++++.||.+|+|+.+|++|+|.+||+.+.++|+|
T Consensus 384 -~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V 462 (563)
T PLN02860 384 -RVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDKAGNLWLIGRSNDRIKTGGENVYPEEVEAVLSQHPGV 462 (563)
T ss_pred -ceeEEEEecCcccccccCCccccchhccCCCeEEccceEEEcCCCCEEEeecccceeEECCEEccHHHHHHHHHhCCCc
Confidence 6799999999999999999999988888899999999999999999999999999999999999999999999999999
Q ss_pred cccEEEeecCCCCCeeeEEEEEeccccc------------CCCCHHHHHHHHHh-cCCCCcccceeEEe-cCCCCCCCCC
Q 045072 470 NEAAVVARPDEFWGETPCAFLSLKAELE------------KKPTEKEIIEYCRA-RLPRYMVPKTVVFK-EELPKTSTGK 535 (556)
Q Consensus 470 ~~~~v~~~~~~~~g~~~~~~v~~~~~~~------------~~~~~~~i~~~l~~-~l~~~~~p~~~~~v-~~lP~t~~GK 535 (556)
.+++|++.+++..|+.++++|++.++.. .....+++.+++++ .+++|++|..++++ ++||+|++||
T Consensus 463 ~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~~~~~~~~lP~t~~GK 542 (563)
T PLN02860 463 ASVVVVGVPDSRLTEMVVACVRLRDGWIWSDNEKENAKKNLTLSSETLRHHCREKNLSRFKIPKLFVQWRKPFPLTTTGK 542 (563)
T ss_pred ceeEEEEEecCcCCceEEEEEEECCccccccccchhhcccccccHHHHHHHHhhCcccccccceEEEEEecCCCCCcccc
Confidence 9999999999988999999999876521 12456788999987 59999999988775 6799999999
Q ss_pred ccHHHHHHHHHHhccccccC
Q 045072 536 IKKFELREMAKAMGKSKVSR 555 (556)
Q Consensus 536 v~r~~l~~~~~~~~~~~~~~ 555 (556)
++|++|++++.+.....=++
T Consensus 543 i~r~~L~~~~~~~~~~~~~~ 562 (563)
T PLN02860 543 IRRDEVRREVLSHLQSLPSN 562 (563)
T ss_pred hhHHHHHHHHHHHHhccccC
Confidence 99999999998776654443
No 7
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=2.4e-71 Score=582.48 Aligned_cols=540 Identities=51% Similarity=0.904 Sum_probs=431.2
Q ss_pred CCCCccCCCCCCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHH
Q 045072 1 MDELKPCTANSSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEA 80 (556)
Q Consensus 1 ~~~~~~~~~~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~ 80 (556)
||.+..+-...++.|+.++|.+.++.+|+++|+.+.+.++||+||.++++++|++|.+.|+++||+|+|+++|+++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~ 80 (579)
T PLN03102 1 MDNLALCEANNVPLTPITFLKRASECYPNRTSIIYGKTRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEM 80 (579)
T ss_pred CCCccCCccccccccHHHHHHHHHHhCCCCeEEEECCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHH
Confidence 67777778888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCC--CCCCeEEEcCCCCCCCCCCCcc
Q 045072 81 HFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDI--KCPPLVLIADHTDHDNDNKSSQ 158 (556)
Q Consensus 81 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 158 (556)
+|||+++|++++|++|.++.+++.++++.++++++|++++..+.+.+......... ....++.+++...... +
T Consensus 81 ~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 155 (579)
T PLN03102 81 HFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPKR-----P 155 (579)
T ss_pred HHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccccccC-----C
Confidence 99999999999999999999999999999999999999887766665544322110 0123333332111000 0
Q ss_pred ccCCCcccccccccccCCCCCC----CCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEE
Q 045072 159 TVDSNFCCTYESLVTKGDPNFK----WIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLW 234 (556)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (556)
. .....+.+++........ ......++++++++|||||||.||+|+++|.++............+...+++++
T Consensus 156 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~ 232 (579)
T PLN03102 156 S---SEELDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLW 232 (579)
T ss_pred c---ccccCHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCCCCeEEe
Confidence 0 001223333322211110 001234679999999999999999999999997554444433455677788999
Q ss_pred ecChhhhhhchhhhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCC
Q 045072 235 TLPMFHANGWSYPWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPP 312 (556)
Q Consensus 235 ~~pl~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~ 312 (556)
.+|++|..++...+.++..|+++++...+++.++++.|+++++|++.++|+++..+.+... ....++++.+++||+++
T Consensus 233 ~~pl~h~~g~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~ 312 (579)
T PLN03102 233 TLPMFHCNGWTFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSPP 312 (579)
T ss_pred cCChhhhcchhHHHHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccceEEEECCCCC
Confidence 9999999998887888889999999888899999999999999999999999999987653 22345788899999999
Q ss_pred cHHHHHHhHhcCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCee
Q 045072 313 PAAVLFRTESLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASL 392 (556)
Q Consensus 313 ~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~ 392 (556)
++...++++++++.+++.||+||+++.+..+.....|...+...........|.+..+...+.+.|++.+.+++.++.+.
T Consensus 313 ~~~~~~~~~~~g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~i~~~~~~~~v~~~~~~~ 392 (579)
T PLN03102 313 PAALVKKVQRLGFQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLADVDVKNKETQESVPRDGKTM 392 (579)
T ss_pred CHHHHHHHHHcCCeEEeecCccccCccccccccccccccCCcccccccccCCCcccccccceEEeccccccccCCCCCCc
Confidence 99999998888999999999999987654433222222221111111112334444344467788876777777543357
Q ss_pred eEEEEecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCcccc
Q 045072 393 GEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEA 472 (556)
Q Consensus 393 Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~ 472 (556)
|||+++|+++++|||++++.+...|. +|||+|||+|++|+||++++.||.+|+|+.+|++|+|.+||..+.++|.|.++
T Consensus 393 GEl~v~g~~~~~GY~~~~~~t~~~f~-~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~a 471 (579)
T PLN03102 393 GEIVIKGSSIMKGYLKNPKATSEAFK-HGWLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENVLYKYPKVLET 471 (579)
T ss_pred eEEEEECcchhhhhcCChhhhHhhhc-cCceecCceEEEcCCCeEEEEeccCcEEEECCEEECHHHHHHHHHhCCCccee
Confidence 99999999999999999999888887 89999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCCCCCeeeEEEEEecccccCC--------CCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHH
Q 045072 473 AVVARPDEFWGETPCAFLSLKAELEKK--------PTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREM 544 (556)
Q Consensus 473 ~v~~~~~~~~g~~~~~~v~~~~~~~~~--------~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~ 544 (556)
+|++.+++..|+.++++|+..++.... ....++.+++++++++|++|..++++++||+|++||++|++|+++
T Consensus 472 ~vv~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~~~~~P~t~~gKi~r~~L~~~ 551 (579)
T PLN03102 472 AVVAMPHPTWGETPCAFVVLEKGETTKEDRVDKLVTRERDLIEYCRENLPHFMCPRKVVFLQELPKNGNGKILKPKLRDI 551 (579)
T ss_pred EEEeccCccccceeEEEEEecCcccccccccccccccHHHHHHHHHhhcccccCCeEEEEcccCCCCCcccccHHHHHHH
Confidence 999999998889999999887653310 135789999999999999999999999999999999999999999
Q ss_pred HHHhc
Q 045072 545 AKAMG 549 (556)
Q Consensus 545 ~~~~~ 549 (556)
+.++.
T Consensus 552 ~~~~~ 556 (579)
T PLN03102 552 AKGLV 556 (579)
T ss_pred HHHhh
Confidence 87643
No 8
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-71 Score=582.83 Aligned_cols=495 Identities=27% Similarity=0.345 Sum_probs=420.8
Q ss_pred CCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEec
Q 045072 14 LTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNN 93 (556)
Q Consensus 14 ~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 93 (556)
.++.++|+++++.+|+++|+++.++++||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 49 ~~~~~~~~~~a~~~pd~~Al~~~~~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~ 128 (549)
T PRK07788 49 GPFAGLVAHAARRAPDRAALIDERGTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKVGARIIL 128 (549)
T ss_pred chHHHHHHHHHHHCCCceEEEECCCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEE
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccccccc
Q 045072 94 INTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESLVT 173 (556)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (556)
+++.++.+++.+++++++++++|++++....+........ ....+........ ........+++++.
T Consensus 129 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~---------~~~~~~~~~~~~~~ 195 (549)
T PRK07788 129 LNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLG----RLRAWGGNPDDDE---------PSGSTDETLDDLIA 195 (549)
T ss_pred eCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccc----cceEEEEecCccc---------cCCcCcccHHHHhc
Confidence 9999999999999999999999999877665544322211 1111111111100 00112234555544
Q ss_pred cCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchhhhHhHhc
Q 045072 174 KGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAV 253 (556)
Q Consensus 174 ~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~ 253 (556)
..... ..+...++.++++|||||||.||+|.++|.++..........+++..+++++...|++|.+|+...+.++..
T Consensus 196 ~~~~~---~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~ 272 (549)
T PRK07788 196 GSSTA---PLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWAHLTLAMAL 272 (549)
T ss_pred CCCCC---CCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHHHHHHHHHHh
Confidence 32221 112345688999999999999999999999998887777777788899999999999999999888888899
Q ss_pred CcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC----CCCCCCCeEEEEeCCCCcHHHHHHhH-hcCCeEE
Q 045072 254 GGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR----SEPLRNPVHILTAGAPPPAAVLFRTE-SLGFLVS 328 (556)
Q Consensus 254 g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----~~~l~~l~~v~~~g~~~~~~~~~~~~-~~~~~l~ 328 (556)
|+++++...+++..+++.++++++|+++++|+++..+++... ...++++|.+++||+++++++.+++. .++..++
T Consensus 273 G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~l~ 352 (549)
T PRK07788 273 GSTVVLRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSALSPELATRALEAFGPVLY 352 (549)
T ss_pred CCEEEECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHhCccce
Confidence 999988888999999999999999999999999999987653 33578999999999999999999988 5688999
Q ss_pred ecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccC
Q 045072 329 HGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLK 408 (556)
Q Consensus 329 ~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~ 408 (556)
+.||+||++..+.... .......+++|.|.+++ +++|+|+ ++.+++.| +.|||+++|++++.||++
T Consensus 353 ~~YG~TE~~~~~~~~~----------~~~~~~~~~vG~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~g~~~~~gY~~ 418 (549)
T PRK07788 353 NLYGSTEVAFATIATP----------EDLAEAPGTVGRPPKGV-TVKILDE-NGNEVPRG--VVGRIFVGNGFPFEGYTD 418 (549)
T ss_pred eccCcchhchhhccCh----------hhhhhcCCCcccCCCCc-EEEEECC-CcCCCCCC--CeEEEEEeCCCccccccC
Confidence 9999999976544321 11112346899999999 9999997 78888887 789999999999999999
Q ss_pred CCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEE
Q 045072 409 DPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCA 488 (556)
Q Consensus 409 ~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~ 488 (556)
++.. ... +|||+|||+|++++||++++.||.+|+|+.+|++|+|.+||+.|.++|+|.+++|++.+++..|+.+++
T Consensus 419 ~~~~---~~~-~g~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a 494 (549)
T PRK07788 419 GRDK---QII-DGLLSSGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAEVEDLLAGHPDVVEAAVIGVDDEEFGQRLRA 494 (549)
T ss_pred CCcc---ccc-CCceecCceEEEcCCCCEEEeccCcceEEECCEEECHHHHHHHHHhCCCeeEEEEECCcCcccccEEEE
Confidence 8865 222 799999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred EEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHH
Q 045072 489 FLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREM 544 (556)
Q Consensus 489 ~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~ 544 (556)
+|+..++.. .+.+++.+++++++++|++|..++++++||+|++||++|++|+++
T Consensus 495 ~vv~~~~~~--~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~ 548 (549)
T PRK07788 495 FVVKAPGAA--LDEDAIKDYVRDNLARYKVPRDVVFLDELPRNPTGKVLKRELREM 548 (549)
T ss_pred EEEeCCCCC--CCHHHHHHHHHHhhhcCCCCcEEEEeCCCCCCCCcCEeHHHhhcc
Confidence 999877544 678899999999999999999999999999999999999999753
No 9
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.8e-71 Score=588.37 Aligned_cols=519 Identities=19% Similarity=0.238 Sum_probs=407.4
Q ss_pred CHHHHHHHHHHh--cCCCCEEEEC------CccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhh
Q 045072 15 TPLGFLERAATV--YGDCPSIIYN------NLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPF 86 (556)
Q Consensus 15 t~~~~l~~~~~~--~p~~~a~~~~------~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 86 (556)
+..++++++++. +|+++|+++. .+++||+||.++++++|.+|++.|+++||+|+++++|++++++++|||++
T Consensus 60 ~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~~~ 139 (647)
T PTZ00237 60 TCYNVLDIHVKNPLKRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSCAR 139 (647)
T ss_pred HHHHHHHHhhcccCCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 345677777654 7999999884 25799999999999999999999999999999999999999999999999
Q ss_pred ccceEeccCCCCCHHHHHHHHhccCCeEEEEecc---------chhhHHHHHhcCCCCCCCCCeEEEcCCCCC-CCCC-C
Q 045072 87 TGAILNNINTRLDARTISVLLQHSESKLVLVDYQ---------SRNLVVEAISLFPSDIKCPPLVLIADHTDH-DNDN-K 155 (556)
Q Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~ 155 (556)
+|++++|+++.++.+++.+++++++++++|+++. ..+.+.++... ... ...+++.+...... .... .
T Consensus 140 ~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~vi~~~~~~~~~~~~~~~ 217 (647)
T PTZ00237 140 IGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIEL-STF-KPSNVITLFRNDITSESDLKK 217 (647)
T ss_pred hCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhc-ccC-CCCEEEEEEcCCccccccccc
Confidence 9999999999999999999999999999999752 22233333321 110 12234433221100 0000 0
Q ss_pred CccccCCCcccccccccccC----CCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHH-HHHHhhhhhhcCCCCCC
Q 045072 156 SSQTVDSNFCCTYESLVTKG----DPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGI-FVMTVDSLIDWSIPKQP 230 (556)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~-~~~~~~~~~~~~~~~~~ 230 (556)
............+++++... ........+.+++++++|+|||||||.||||+++|.+. ...............++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d 297 (647)
T PTZ00237 218 IETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSIIEKDIPT 297 (647)
T ss_pred ccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhcCCCCCc
Confidence 00000001123344444321 11111112356789999999999999999999999984 33332223345667789
Q ss_pred EEEEecChhhhhhchhhhHhHhcCcEeEEecC--CC----HHHHHHHHHHhCCcEEechhHHHHHHHcCCC-------CC
Q 045072 231 VYLWTLPMFHANGWSYPWGMAAVGGTNVCLRK--FD----AAVIYKMIRQHGVTHMCGAPVVLNMISNLPR-------SE 297 (556)
Q Consensus 231 ~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~--~~----~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~-------~~ 297 (556)
++++..|+.|+.+...++.++..|+++++... .. +..+++.++++++|+++++|++++.|.+... ..
T Consensus 298 ~~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~ 377 (647)
T PTZ00237 298 VVFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIRSKY 377 (647)
T ss_pred EEEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCcccccccccc
Confidence 99999999998776678889999999988753 12 6889999999999999999999999986432 23
Q ss_pred CCCCCeEEEEeCCCCcHHHHHHhH-hcCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEE
Q 045072 298 PLRNPVHILTAGAPPPAAVLFRTE-SLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDV 376 (556)
Q Consensus 298 ~l~~l~~v~~~g~~~~~~~~~~~~-~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i 376 (556)
.++++|.++++|+++++++.+++. .+++++++.||+||+++.++.... ......+++|.|.+++ +++|
T Consensus 378 ~l~~Lr~i~~~G~~l~~~~~~~~~~~~g~~i~~~yG~TE~~~~~~~~~~----------~~~~~~~s~G~p~~g~-~~~i 446 (647)
T PTZ00237 378 DLSNLKEIWCGGEVIEESIPEYIENKLKIKSSRGYGQTEIGITYLYCYG----------HINIPYNATGVPSIFI-KPSI 446 (647)
T ss_pred CcchheEEEecCccCCHHHHHHHHHhcCCCEEeeechHHhChhhhccCC----------CCCCCCCCCccCcCCc-eEEE
Confidence 578999999999999999999888 568999999999999865433211 0112236899999999 9999
Q ss_pred ecCCCCceecCCCCeeeEEEEecC---CccccccCCCCccccCcCC-CCceecCceEEEecCCcEEEEccCCCeEeeCcE
Q 045072 377 IDSESGLSVSHDGASLGEIVFRGG---SMMLGYLKDPNGTRKCMKD-DGWFYTGDVGVIHADGYLEIKDRSKDVIISGGE 452 (556)
Q Consensus 377 ~d~~~~~~~~~~~~~~Gel~i~~~---~~~~gy~~~~~~~~~~~~~-~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~ 452 (556)
+|+ +|.+++.+ +.|||++++| +++.|||++++.+...|.. +|||+|||+|++|+||++++.||+||+|+.+|+
T Consensus 447 ~d~-~g~~~~~g--e~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~ 523 (647)
T PTZ00237 447 LSE-DGKELNVN--EIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDENGYYTIVSRSDDQIKISGN 523 (647)
T ss_pred ECC-CCCCCCCC--CceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECCCCeEEEEeccCCEEEECCE
Confidence 997 89999887 6899999986 7899999999888766653 799999999999999999999999999999999
Q ss_pred eeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEeccccc-CCCC----HHHHHHHHHhcCCCCcccceeEEecC
Q 045072 453 NLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELE-KKPT----EKEIIEYCRARLPRYMVPKTVVFKEE 527 (556)
Q Consensus 453 ~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~-~~~~----~~~i~~~l~~~l~~~~~p~~~~~v~~ 527 (556)
+|+|.+||++|.+||.|.+++|++.+++..|+.++++|+++++.. ...+ .++|.+.+++++++++.|..++++++
T Consensus 524 rI~p~eIE~~l~~~p~V~eaavvg~~~~~~g~~~~a~Vv~~~~~~~~~~~~~~l~~~i~~~~~~~l~~~~~P~~i~~v~~ 603 (647)
T PTZ00237 524 KVQLNTIETSILKHPLVLECCSIGIYDPDCYNVPIGLLVLKQDQSNQSIDLNKLKNEINNIITQDIESLAVLRKIIIVNQ 603 (647)
T ss_pred EeCHHHHHHHHHhCCCceeeEEEeeEcCCCCCEEEEEEEeccCccccCCCHHHHHHHHHHHHHhhcCccccCcEEEEcCC
Confidence 999999999999999999999999999998999999999875422 1122 35677888899999999999999999
Q ss_pred CCCCCCCCccHHHHHHHHHHhc
Q 045072 528 LPKTSTGKIKKFELREMAKAMG 549 (556)
Q Consensus 528 lP~t~~GKv~r~~l~~~~~~~~ 549 (556)
||+|++||++|+.|++++.+..
T Consensus 604 lP~T~sGKi~R~~Lr~~~~~~~ 625 (647)
T PTZ00237 604 LPKTKTGKIPRQIISKFLNDSN 625 (647)
T ss_pred CCCCCCccEeHHHHHHHHcCCC
Confidence 9999999999999999986543
No 10
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=1.7e-70 Score=581.60 Aligned_cols=515 Identities=22% Similarity=0.272 Sum_probs=412.9
Q ss_pred HHHHHHHHHhcCCCCEEEEC------CccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 045072 17 LGFLERAATVYGDCPSIIYN------NLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAI 90 (556)
Q Consensus 17 ~~~l~~~~~~~p~~~a~~~~------~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (556)
.++|++++..+|+++|+++. .+++||+||.++++++|.+|++.|+++||+|+++++|++++++++|||+++|++
T Consensus 55 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~~~Gav 134 (628)
T TIGR02316 55 HNALDRHLDERGEQLALVTVSSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACARIGAI 134 (628)
T ss_pred HHHHHHHhCcCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCE
Confidence 46777788889999999972 368999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHHhccCCeEEEEeccc---------hhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccC
Q 045072 91 LNNINTRLDARTISVLLQHSESKLVLVDYQS---------RNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVD 161 (556)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (556)
++|+++.++.+++.+++++++++++|+++.. ...+.++...... ....++.++....... ..+
T Consensus 135 ~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~vi~~~~~~~~~~---~~~--- 206 (628)
T TIGR02316 135 HSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQH--PPPHVLLVDRGLAPMR---LIP--- 206 (628)
T ss_pred EEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCC--CCCEEEEEeCCCCCcC---ccc---
Confidence 9999999999999999999999999997643 2222332222111 1234555543211000 000
Q ss_pred CCcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHH-HhhhhhhcCCCCCCEEEEecChhh
Q 045072 162 SNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVM-TVDSLIDWSIPKQPVYLWTLPMFH 240 (556)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~pl~~ 240 (556)
.....+.+++..............++++++|+|||||||.||||+++|.++..+ .......++++++|++++..|++|
T Consensus 207 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 285 (628)
T TIGR02316 207 -GRDVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSASDVGW 285 (628)
T ss_pred -CccccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCCe
Confidence 011234444333211111112245789999999999999999999999997543 333444567889999999999999
Q ss_pred hhhchh-hhHhHhcCcEeEEec----CCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC----CCCCCCCeEEEEeCCC
Q 045072 241 ANGWSY-PWGMAAVGGTNVCLR----KFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR----SEPLRNPVHILTAGAP 311 (556)
Q Consensus 241 ~~g~~~-~~~~~~~g~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----~~~l~~l~~v~~~g~~ 311 (556)
..++.. ++.++..|+++++.. .+++..+++.++++++|+++++|++++.|.+... ...++++|.+++||++
T Consensus 286 ~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gGe~ 365 (628)
T TIGR02316 286 VVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAGEP 365 (628)
T ss_pred eehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCC
Confidence 988754 678889999988876 2578999999999999999999999999876542 3468899999999999
Q ss_pred CcHHHHHHhH-hcCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCC
Q 045072 312 PPAAVLFRTE-SLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGA 390 (556)
Q Consensus 312 ~~~~~~~~~~-~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~ 390 (556)
+++++.+++. .++..+++.||+||++..++...... .......+++|.|++++ +++|+|+++|.+++.+
T Consensus 366 l~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~-------~~~~~~~gs~G~p~~g~-~v~i~d~~~g~~~~~g-- 435 (628)
T TIGR02316 366 LDEPTAHWITDGLGKPVIDNYWQTETGWPVLAIMPGL-------DLKPVKLGSPGLPMYGY-HLRVLDEATGRPCGPN-- 435 (628)
T ss_pred CCHHHHHHHHHHhCCCEEecccccccCceeecCCCCC-------CcCCCCCCCcccCcCCc-eEEEEECCCCCCCCCC--
Confidence 9999998887 56899999999999985543321110 00112346789999999 9999998789999887
Q ss_pred eeeEEEEecC---CccccccCCCCccccCc---CCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHh
Q 045072 391 SLGEIVFRGG---SMMLGYLKDPNGTRKCM---KDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLY 464 (556)
Q Consensus 391 ~~Gel~i~~~---~~~~gy~~~~~~~~~~~---~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~ 464 (556)
+.|||+++|| +.+.|||++++.+...+ ..++||+|||+|++|+||+++++||.||+||++|.+|+|.+||++|.
T Consensus 436 ~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~~eIE~~l~ 515 (628)
T TIGR02316 436 EKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGTREIEESVS 515 (628)
T ss_pred CcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeCHHHHHHHHH
Confidence 6799999998 57899999987665433 23789999999999999999999999999999999999999999999
Q ss_pred cCCCccccEEEeecCCCCCeeeEEEEEecccccC------CCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccH
Q 045072 465 TNPAVNEAAVVARPDEFWGETPCAFLSLKAELEK------KPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKK 538 (556)
Q Consensus 465 ~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~------~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r 538 (556)
++|+|.+++|++.+++..|+.++++|+++++... ....++|.+++++++++|+.|..++++++||+|++||++|
T Consensus 516 ~~p~V~ea~Vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~L~~~~~P~~v~~v~~lP~t~sGKi~r 595 (628)
T TIGR02316 516 SHPSVAEVAVVGVHDELKGQVAVVFAILKESDSAGDAHDPHAVETGMMDCVVRQLGAVARPARVYFVAALPKTRSGKLLR 595 (628)
T ss_pred hCCCcceEEEEeeecCCCCeEEEEEEEEcCCcccccccchHHHHHHHHHHHHHhcCCCcCCCEEEEcCCCCCCCchHHHH
Confidence 9999999999999999999999999988765321 1235789999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcc
Q 045072 539 FELREMAKAMGK 550 (556)
Q Consensus 539 ~~l~~~~~~~~~ 550 (556)
+.|++.+.....
T Consensus 596 ~~L~~~~~~~~~ 607 (628)
T TIGR02316 596 RSIQALAEGRDP 607 (628)
T ss_pred HHHHHHHcCCCC
Confidence 999998875543
No 11
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.7e-71 Score=591.16 Aligned_cols=523 Identities=21% Similarity=0.252 Sum_probs=413.8
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCEEEE----CC-----ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHH
Q 045072 10 NSSPLTPLGFLERAATVYGDCPSIIY----NN-----LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEA 80 (556)
Q Consensus 10 ~~~~~t~~~~l~~~~~~~p~~~a~~~----~~-----~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~ 80 (556)
+....|+.++|+++++.+|+++|+.+ .+ +.+||+||.++++++|.+|++.|+++||+|+|+++|+++|+++
T Consensus 40 ~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~ 119 (651)
T PLN02736 40 HPEIGTLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIV 119 (651)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHH
Confidence 34557899999999999999999953 11 4599999999999999999999999999999999999999999
Q ss_pred HHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCcccc
Q 045072 81 HFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTV 160 (556)
Q Consensus 81 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (556)
++||+++|++++|+++.++.+++.+++++++++++|++.+....+.......+. ...++..+..... .. ..+..
T Consensus 120 ~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~---l~~ii~~~~~~~~-~~--~~~~~ 193 (651)
T PLN02736 120 DHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPS---VRLIVVVGGADEP-LP--SLPSG 193 (651)
T ss_pred HHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCCC---ceEEEEECCCchh-hh--hhhcc
Confidence 999999999999999999999999999999999999998776665555443321 2333433221100 00 00000
Q ss_pred CCCcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhh
Q 045072 161 DSNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFH 240 (556)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~ 240 (556)
.......++++++..........+..++++++|+|||||||.||||++||+++..++......+++.++|++++.+|++|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~~~d~~l~~lPl~h 273 (651)
T PLN02736 194 TGVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFYPSDVHISYLPLAH 273 (651)
T ss_pred CCcEEEEHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCCCCCEEEEeCCHHH
Confidence 01112345555443322111122346789999999999999999999999999888877777778899999999999999
Q ss_pred hhhchhhhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC-------------------------
Q 045072 241 ANGWSYPWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR------------------------- 295 (556)
Q Consensus 241 ~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~------------------------- 295 (556)
.+++...+.++..|+++++.+ .++..+++.++++++|+++++|.+++.+.+...
T Consensus 274 ~~~~~~~~~~l~~G~~i~~~~-~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (651)
T PLN02736 274 IYERVNQIVMLHYGVAVGFYQ-GDNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQAL 352 (651)
T ss_pred HHHHHHHHHHHHcCCEEEEeC-CCHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 999988888888999987765 478899999999999999999999987754210
Q ss_pred -----C-------------CCC-CCCeEEEEeCCCCcHHHHHHhH-hcCCeEEecccccccccceeeccccccccCCChh
Q 045072 296 -----S-------------EPL-RNPVHILTAGAPPPAAVLFRTE-SLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPAT 355 (556)
Q Consensus 296 -----~-------------~~l-~~l~~v~~~g~~~~~~~~~~~~-~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~ 355 (556)
. ..+ +++|.+++||+++++++.+++. .+++.+++.||+||+++.++....
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g~~~~~~YG~TE~~~~~~~~~~---------- 422 (651)
T PLN02736 353 ENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFGGRVLEGYGMTETSCVISGMDE---------- 422 (651)
T ss_pred HcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhCCCeEEEechHHhchheeccCC----------
Confidence 0 011 4799999999999999999888 568999999999999866543221
Q ss_pred hhccccccCccccceeeeeEEecCCCCce---ecCCCCeeeEEEEecCCccccccCCCCccccCcCCCCceecCceEEEe
Q 045072 356 ERARMKSRQGVRTVCFTEIDVIDSESGLS---VSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIH 432 (556)
Q Consensus 356 ~~~~~~~~~G~~~~~~~~~~i~d~~~~~~---~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~ 432 (556)
.....+++|.|.+++ +++|+|.+++.. ..++ +.|||+++||+++.|||++|+.+...|..+|||+|||+|++|
T Consensus 423 -~~~~~~~vG~p~pg~-~v~i~d~~~~~~~~~~~~~--~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d 498 (651)
T PLN02736 423 -GDNLSGHVGSPNPAC-EVKLVDVPEMNYTSEDQPY--PRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWL 498 (651)
T ss_pred -CCCCCCccCCccCce-EEEEEEccccCcccCCCCC--CCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEc
Confidence 112346899999999 999998533321 1122 359999999999999999999999989879999999999999
Q ss_pred cCCcEEEEccCCCeEee-CcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEeccccc------CCCCHHHH
Q 045072 433 ADGYLEIKDRSKDVIIS-GGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELE------KKPTEKEI 505 (556)
Q Consensus 433 ~dg~l~~~GR~~d~i~~-~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~------~~~~~~~i 505 (556)
+||++++.||.+|+||. +|++|+|.+||+.|.+||.|.+|+|++. .+++.++|+|++.++.- ...+..++
T Consensus 499 ~dG~l~i~GR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~---~~~~~~~A~vv~~~~~~~~~~~~~~~~~~~~ 575 (651)
T PLN02736 499 PGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGD---SLNSSLVAVVVVDPEVLKAWAASEGIKYEDL 575 (651)
T ss_pred CCCcEEEEEechhheEcCCCcEechHHHHHHHhcCCCeeEEEEEec---CCCceeEEEEEeCHHHHHHHHHHcCCCccCH
Confidence 99999999999999995 7999999999999999999999999983 24678999999876420 00111112
Q ss_pred HHHH-------------H-----hcCCCCcccceeEEecCCC------CCCCCCccHHHHHHHHHHhccccccCC
Q 045072 506 IEYC-------------R-----ARLPRYMVPKTVVFKEELP------KTSTGKIKKFELREMAKAMGKSKVSRM 556 (556)
Q Consensus 506 ~~~l-------------~-----~~l~~~~~p~~~~~v~~lP------~t~~GKv~r~~l~~~~~~~~~~~~~~~ 556 (556)
.+++ . +.|+.|++|..++++++.| +|++||++|+++++.|.+.++.-|++|
T Consensus 576 ~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lT~~~Ki~R~~i~~~~~~~i~~~y~~~ 650 (651)
T PLN02736 576 KQLCNDPRVRAAVLADMDAVGREAQLRGFEFAKAVTLVPEPFTVENGLLTPTFKVKRPQAKAYFAKAISDMYAEL 650 (651)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHhcCCCcceeeeEEEEeCCCCcCCCCcCChhhhhhHHHHHHHHHHHHHHHHhhc
Confidence 2221 1 2599999999999999886 799999999999999999988777653
No 12
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=8.8e-70 Score=575.55 Aligned_cols=522 Identities=27% Similarity=0.393 Sum_probs=421.0
Q ss_pred cCCCCCCCCCHHHHHHHHHHhcCCCCEEEEC--------CccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHH
Q 045072 6 PCTANSSPLTPLGFLERAATVYGDCPSIIYN--------NLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAM 77 (556)
Q Consensus 6 ~~~~~~~~~t~~~~l~~~~~~~p~~~a~~~~--------~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~ 77 (556)
+......+.|+.++|.+.++.+|+++|+++. .+++||+||.+++.++|++|++.|+++||+|+++++|++++
T Consensus 17 ~~~~~~~~~t~~~~l~~~a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~ 96 (632)
T PRK07529 17 PLAARDLPASTYELLSRAAARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPET 96 (632)
T ss_pred CchhhcCCCCHHHHHHHHHHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH
Confidence 3444466789999999999999999999873 37899999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccch-----hhHHHHHhcCCCCCCCCCeEEEcCCCCCC-
Q 045072 78 YEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSR-----NLVVEAISLFPSDIKCPPLVLIADHTDHD- 151 (556)
Q Consensus 78 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 151 (556)
++++|||+++| +++|++|.++.+++.+++++++++++|++.... ..+.......+. ...++.++......
T Consensus 97 ~~~~lA~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~ 172 (632)
T PRK07529 97 HFALWGGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPE---LRTVVEVDLARYLPG 172 (632)
T ss_pred HHHHHHHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCc---ceeEEEecCcccccc
Confidence 99999999999 569999999999999999999999999986542 233333333221 33444443221000
Q ss_pred CCCCCcccc---CCCcccccccccccCCCC-CCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCC
Q 045072 152 NDNKSSQTV---DSNFCCTYESLVTKGDPN-FKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIP 227 (556)
Q Consensus 152 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~ 227 (556)
......+.. .......+.+.+...... .....+..++++++++|||||||.||+|.++|+++..+.......+++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~ 252 (632)
T PRK07529 173 PKRLAVPLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLGLG 252 (632)
T ss_pred cccccccccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcCCC
Confidence 000000000 111123344444433221 1111234678999999999999999999999999988776666677788
Q ss_pred CCCEEEEecChhhhhhchh-hhHhHhcCcEeEEecCC---C---HHHHHHHHHHhCCcEEechhHHHHHHHcCCC-CCCC
Q 045072 228 KQPVYLWTLPMFHANGWSY-PWGMAAVGGTNVCLRKF---D---AAVIYKMIRQHGVTHMCGAPVVLNMISNLPR-SEPL 299 (556)
Q Consensus 228 ~~~~~~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~~~---~---~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~-~~~l 299 (556)
+++++++.+|++|.+++.. ++.++..|+++++.++. + ...+++.++++++|++.++|+++..+.+... ...+
T Consensus 253 ~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~ 332 (632)
T PRK07529 253 PGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPVDGHDI 332 (632)
T ss_pred CCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcccCCCc
Confidence 9999999999999988765 67788889998887642 1 3689999999999999999999999988765 3468
Q ss_pred CCCeEEEEeCCCCcHHHHHHhH-hcCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEe-
Q 045072 300 RNPVHILTAGAPPPAAVLFRTE-SLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVI- 377 (556)
Q Consensus 300 ~~l~~v~~~g~~~~~~~~~~~~-~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~- 377 (556)
+++|.+++||+++++++.++++ .+++++++.||+||++.++..+... .....+++|.+.++. .++|+
T Consensus 333 ~slr~v~~gg~~l~~~l~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~----------~~~~~~svG~~~p~~-~v~i~~ 401 (632)
T PRK07529 333 SSLRYALCGAAPLPVEVFRRFEAATGVRIVEGYGLTEATCVSSVNPPD----------GERRIGSVGLRLPYQ-RVRVVI 401 (632)
T ss_pred cceEEEEEcCCCCCHHHHHHHHHHhCCcEeeeecccccCcccccCCcc----------ccccCCCcccccCCc-eEEEEE
Confidence 8999999999999999999988 5699999999999998665443211 112346899999998 88875
Q ss_pred -cCCCC---ceecCCCCeeeEEEEecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEe
Q 045072 378 -DSESG---LSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGEN 453 (556)
Q Consensus 378 -d~~~~---~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~ 453 (556)
|+ ++ .+++.| +.|||+|+|++++.||++++. +...+..+|||+|||+|++++||++++.||.+|+|+.+|.+
T Consensus 402 ~d~-~g~~~~~~~~g--~~Gel~v~gp~v~~GY~~~~~-~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~ 477 (632)
T PRK07529 402 LDD-AGRYLRDCAVD--EVGVLCIAGPNVFSGYLEAAH-NKGLWLEDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHN 477 (632)
T ss_pred cCC-CCcccccCCCC--CceEEEEECCCccccccCCcc-ccccccCCCceEcCcEEEEcCCceEEEEecccCEEEeCCEE
Confidence 54 45 677777 689999999999999998654 44555458999999999999999999999999999999999
Q ss_pred eChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCC-CCcccceeEEecCCCCCC
Q 045072 454 LSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLP-RYMVPKTVVFKEELPKTS 532 (556)
Q Consensus 454 v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~-~~~~p~~~~~v~~lP~t~ 532 (556)
|+|.+||+.|.+||+|.+++|++.+++..|+.++++|++.++.. .+.+++.++++++++ .+++|..++++++||+|+
T Consensus 478 i~p~eIE~~l~~~p~V~~a~vvg~~d~~~ge~~~a~v~l~~~~~--~~~~~l~~~~~~~l~~~~~~P~~i~~v~~lP~t~ 555 (632)
T PRK07529 478 IDPAAIEEALLRHPAVALAAAVGRPDAHAGELPVAYVQLKPGAS--ATEAELLAFARDHIAERAAVPKHVRILDALPKTA 555 (632)
T ss_pred ECHHHHHHHHHhCCCeeEEEEEeccCCCCCceeEEEEEEcCCCC--CCHHHHHHHHHHhcchhccCCcEEEEecCCCCCC
Confidence 99999999999999999999999999999999999999887654 678899999999986 478999999999999999
Q ss_pred CCCccHHHHHHHHHHh
Q 045072 533 TGKIKKFELREMAKAM 548 (556)
Q Consensus 533 ~GKv~r~~l~~~~~~~ 548 (556)
+||++|++|++.+...
T Consensus 556 ~GKi~r~~Lr~~~~~~ 571 (632)
T PRK07529 556 VGKIFKPALRRDAIRR 571 (632)
T ss_pred CCcccHHHHHHHHHHH
Confidence 9999999999987653
No 13
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=4.4e-70 Score=579.63 Aligned_cols=515 Identities=21% Similarity=0.280 Sum_probs=408.6
Q ss_pred HHHHHHHHH-hcCCCCEEEECC------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccc
Q 045072 17 LGFLERAAT-VYGDCPSIIYNN------LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGA 89 (556)
Q Consensus 17 ~~~l~~~~~-~~p~~~a~~~~~------~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (556)
.++|+++++ .+|+++|+++.+ +.+||+||.++++++|++|++.|+++||+|++++||++++++++|||+++|+
T Consensus 91 ~~~l~~~~~~~~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA~~~~Ga 170 (666)
T PLN02654 91 YNCLDRNVEAGNGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLACARIGA 170 (666)
T ss_pred HHHHHHhhccCCCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC
Confidence 467776665 489999998842 6899999999999999999999999999999999999999999999999999
Q ss_pred eEeccCCCCCHHHHHHHHhccCCeEEEEeccchh---------hHHHHHhcCCC-CCCCCCeEEEcCCCCCCCCCCCccc
Q 045072 90 ILNNINTRLDARTISVLLQHSESKLVLVDYQSRN---------LVVEAISLFPS-DIKCPPLVLIADHTDHDNDNKSSQT 159 (556)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~---------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (556)
+++|+++.++.+++.+++++++++++|+++.... .+..+...... ......++.......... ....
T Consensus 171 v~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~- 247 (666)
T PLN02654 171 VHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKR--EDTK- 247 (666)
T ss_pred EEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEecccccccc--cccc-
Confidence 9999999999999999999999999999876422 12222221110 000111222221110000 0000
Q ss_pred cCCCcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHH-hhhhhhcCCCCCCEEEEecCh
Q 045072 160 VDSNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMT-VDSLIDWSIPKQPVYLWTLPM 238 (556)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~pl 238 (556)
........+++++..... .....+...+++++|+|||||||.||||+++|++++... ......++++++|++++..|+
T Consensus 248 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 326 (666)
T PLN02654 248 WQEGRDVWWQDVVPNYPT-KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPTDVYWCTADC 326 (666)
T ss_pred cccCCcccHHHHhhcCCC-CCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCCCCCcEEEEcCCc
Confidence 000011223333322111 111123467899999999999999999999999976433 344456788999999999999
Q ss_pred hhhhhchh-hhHhHhcCcEeEEecC----CCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC----CCCCCCCeEEEEeC
Q 045072 239 FHANGWSY-PWGMAAVGGTNVCLRK----FDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR----SEPLRNPVHILTAG 309 (556)
Q Consensus 239 ~~~~g~~~-~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----~~~l~~l~~v~~~g 309 (556)
+|..|... ++++++.|+++++... +++..+++.|+++++|+++++|++++.|.+... ...++++|.++++|
T Consensus 327 ~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr~i~~~G 406 (666)
T PLN02654 327 GWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLRVLGSVG 406 (666)
T ss_pred hhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhheeEEEEec
Confidence 99998765 6788899999988863 589999999999999999999999999987643 34678999999999
Q ss_pred CCCcHHHHHHhH-hcC---CeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCcee
Q 045072 310 APPPAAVLFRTE-SLG---FLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSV 385 (556)
Q Consensus 310 ~~~~~~~~~~~~-~~~---~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~ 385 (556)
++++++..+++. .++ +++.+.||+||+++....... .......+++|.|.+++ +++|+|+ +|.++
T Consensus 407 e~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~---------~~~~~~~gs~G~p~~g~-~v~i~d~-~g~~~ 475 (666)
T PLN02654 407 EPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLP---------GAWPQKPGSATFPFFGV-QPVIVDE-KGKEI 475 (666)
T ss_pred CCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCC---------CCCCCCCCccCCCCCCc-eEEEECC-CCCCC
Confidence 999999998887 556 789999999999876543211 00112346899999999 9999997 78888
Q ss_pred cCCCCeeeEEEEec--CCccccccCCCCccccCcC--CCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHH
Q 045072 386 SHDGASLGEIVFRG--GSMMLGYLKDPNGTRKCMK--DDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVES 461 (556)
Q Consensus 386 ~~~~~~~Gel~i~~--~~~~~gy~~~~~~~~~~~~--~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~ 461 (556)
+.+ +.|||++++ |+++.|||++++.+...+. .+|||+|||+|++|+||+++++||++|+||.+|.+|+|.+||+
T Consensus 476 ~~~--~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~ 553 (666)
T PLN02654 476 EGE--CSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVES 553 (666)
T ss_pred CCC--CceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECCCCcEEEeeeccCeEEeCCEEECHHHHHH
Confidence 765 579999999 7899999999987765542 2799999999999999999999999999999999999999999
Q ss_pred HHhcCCCccccEEEeecCCCCCeeeEEEEEecccccC-CCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHH
Q 045072 462 VLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEK-KPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFE 540 (556)
Q Consensus 462 ~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~-~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~ 540 (556)
+|.+||.|.+++|++.+++..|+.++++|++.++... +...++|.++++++|++++.|..++++++||+|.+||++|+.
T Consensus 554 ~l~~~p~V~eaaVvg~~d~~~ge~~~a~Vvl~~~~~~~~~l~~~l~~~~~~~L~~~~~P~~i~~v~~lP~T~sGKi~r~~ 633 (666)
T PLN02654 554 ALVSHPQCAEAAVVGIEHEVKGQGIYAFVTLVEGVPYSEELRKSLILTVRNQIGAFAAPDKIHWAPGLPKTRSGKIMRRI 633 (666)
T ss_pred HHHhCCCeeeEEEEeeEcCCCCeEEEEEEEECCCCCCCHHHHHHHHHHHHHhCCCCcCCCEEEECCCCCCCCCcCchHHH
Confidence 9999999999999999999999999999999876431 123457889999999999999999999999999999999999
Q ss_pred HHHHHHHh
Q 045072 541 LREMAKAM 548 (556)
Q Consensus 541 l~~~~~~~ 548 (556)
|++.+.+.
T Consensus 634 l~~~~~~~ 641 (666)
T PLN02654 634 LRKIASRQ 641 (666)
T ss_pred HHHHHcCC
Confidence 99998753
No 14
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=1.5e-69 Score=575.44 Aligned_cols=511 Identities=25% Similarity=0.347 Sum_probs=413.8
Q ss_pred CHHHHHHHHHHhcCCCCEEEECC------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhcc
Q 045072 15 TPLGFLERAATVYGDCPSIIYNN------LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTG 88 (556)
Q Consensus 15 t~~~~l~~~~~~~p~~~a~~~~~------~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (556)
...++|+++++.+|+++|+++.+ +++||+||.+++.++|.+|++.|+++||+|+++++|++++++++|||+++|
T Consensus 58 ~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G 137 (625)
T TIGR02188 58 VSYNCVDRHLEARPDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACARIG 137 (625)
T ss_pred HHHHHHHHhhccCCCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhC
Confidence 34567777888899999999754 479999999999999999999999999999999999999999999999999
Q ss_pred ceEeccCCCCCHHHHHHHHhccCCeEEEEeccch---------hhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccc
Q 045072 89 AILNNINTRLDARTISVLLQHSESKLVLVDYQSR---------NLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQT 159 (556)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (556)
++++++++.++.+++.+++++++++++|+++... ..+.++....+. ....++.+....... .
T Consensus 138 av~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~------~- 208 (625)
T TIGR02188 138 AIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPV--SVEHVLVVRRTGNPV------P- 208 (625)
T ss_pred CEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCC--CccEEEEEcCCCCCc------C-
Confidence 9999999999999999999999999999987532 233333332220 123344443221100 0
Q ss_pred cCCCcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhh-hhhhcCCCCCCEEEEecCh
Q 045072 160 VDSNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVD-SLIDWSIPKQPVYLWTLPM 238 (556)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~pl 238 (556)
........+++++....... ...+..++++++|+|||||||.||||+++|.+++..... ....+++.++|++++..|+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 287 (625)
T TIGR02188 209 WVEGRDVWWHDLMAKASAYC-EPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTADV 287 (625)
T ss_pred ccccccccHHHHHhhcCCCC-CceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECCCc
Confidence 00001123444443322211 122356789999999999999999999999998654433 3334678899999999999
Q ss_pred hhhhhchh-hhHhHhcCcEeEEecC----CCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC----CCCCCCCeEEEEeC
Q 045072 239 FHANGWSY-PWGMAAVGGTNVCLRK----FDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR----SEPLRNPVHILTAG 309 (556)
Q Consensus 239 ~~~~g~~~-~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----~~~l~~l~~v~~~g 309 (556)
+|..+... ++.++..|+++++... +++..++++++++++|+++++|++++.|.+... ...++++|.++++|
T Consensus 288 ~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~G 367 (625)
T TIGR02188 288 GWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSVG 367 (625)
T ss_pred hhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEec
Confidence 99988755 6778889999988752 479999999999999999999999999987653 34678999999999
Q ss_pred CCCcHHHHHHhH-hcC---CeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCcee
Q 045072 310 APPPAAVLFRTE-SLG---FLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSV 385 (556)
Q Consensus 310 ~~~~~~~~~~~~-~~~---~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~ 385 (556)
+++++++.+++. .++ +++++.||+||+++.++..... ......+++|.|++++ +++|+|+ +|.++
T Consensus 368 ~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~---------~~~~~~~~~G~p~~g~-~~~i~d~-~g~~~ 436 (625)
T TIGR02188 368 EPINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPG---------ATPTKPGSATLPFFGI-EPAVVDE-EGNPV 436 (625)
T ss_pred CCCCHHHHHHHHHHcCCCCCceEecccccccCCceeecCCC---------CCCcCCCcccCCcCCc-eEEEECC-CCCCC
Confidence 999999998887 443 7899999999998765442211 0112346799999999 9999996 78888
Q ss_pred c-CCCCeeeEEEEec--CCccccccCCCCccccCcC--CCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHH
Q 045072 386 S-HDGASLGEIVFRG--GSMMLGYLKDPNGTRKCMK--DDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVE 460 (556)
Q Consensus 386 ~-~~~~~~Gel~i~~--~~~~~gy~~~~~~~~~~~~--~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie 460 (556)
+ .+ +.|||+++| |+++.|||++++.+...+. .+|||+|||+|++|+||++++.||.+|+|+.+|++|+|.+||
T Consensus 437 ~~~g--~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE 514 (625)
T TIGR02188 437 EGPG--EGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTAEIE 514 (625)
T ss_pred CCCC--CeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEcCCCcEEEEecccCEEEeCCEEECHHHHH
Confidence 7 66 689999999 6899999999986665542 378999999999999999999999999999999999999999
Q ss_pred HHHhcCCCccccEEEeecCCCCCeeeEEEEEecccccCC-CCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHH
Q 045072 461 SVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKK-PTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKF 539 (556)
Q Consensus 461 ~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~-~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~ 539 (556)
++|.++|.|.+++|++.+++..|+.++++|++.++.... ...++|.+++++++++++.|..++++++||+|++||++|+
T Consensus 515 ~~l~~~p~V~e~~vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sGKi~r~ 594 (625)
T TIGR02188 515 SALVSHPAVAEAAVVGIPDDIKGQAIYAFVTLKDGYEPDDELRKELRKHVRKEIGPIAKPDKIRFVPGLPKTRSGKIMRR 594 (625)
T ss_pred HHHHhCCCcceEEEEeeEcCCCCeEEEEEEEeCCCCCCCHHHHHHHHHHHHhhcCCCccCcEEEECCCCCCCCCccchHH
Confidence 999999999999999999998899999999988765411 2357899999999999999999999999999999999999
Q ss_pred HHHHHHHHh
Q 045072 540 ELREMAKAM 548 (556)
Q Consensus 540 ~l~~~~~~~ 548 (556)
.|++++...
T Consensus 595 ~l~~~~~~~ 603 (625)
T TIGR02188 595 LLRKIAAGE 603 (625)
T ss_pred HHHHHHcCC
Confidence 999997654
No 15
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=9.2e-69 Score=561.11 Aligned_cols=503 Identities=30% Similarity=0.465 Sum_probs=421.6
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCEEEECC------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHH
Q 045072 10 NSSPLTPLGFLERAATVYGDCPSIIYNN------LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFA 83 (556)
Q Consensus 10 ~~~~~t~~~~l~~~~~~~p~~~a~~~~~------~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA 83 (556)
-+...++.+.|.+.++.+|+++|+++.+ +++||.||.++++++|.+|.+.|+++||+|+++++|++++++++||
T Consensus 20 ~~~~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~la 99 (547)
T PRK13295 20 HWHDRTINDDLDACVASCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYLA 99 (547)
T ss_pred CCcCCCHHHHHHHHHHHCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHH
Confidence 4556789999999999999999999865 8999999999999999999999999999999999999999999999
Q ss_pred hhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccch-----hhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCcc
Q 045072 84 IPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSR-----NLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQ 158 (556)
Q Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (556)
|+++|++++|++|.++.+++.++++.+++++++++++.. +.+.+.....+. ...++..+....
T Consensus 100 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--------- 167 (547)
T PRK13295 100 CSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPA---LRHVVVVGGDGA--------- 167 (547)
T ss_pred HHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCC---cceEEEecCCCc---------
Confidence 999999999999999999999999999999999987642 222222222211 223333332110
Q ss_pred ccCCCcccccccccccC-------CCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCE
Q 045072 159 TVDSNFCCTYESLVTKG-------DPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPV 231 (556)
Q Consensus 159 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~ 231 (556)
..+.+++... ............+++++++|||||||.||+|.++|.++..+.......+++.++++
T Consensus 168 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~ 240 (547)
T PRK13295 168 -------DSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLGADDV 240 (547)
T ss_pred -------cCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCCCCCCe
Confidence 1121211110 00000111245689999999999999999999999999888777777778899999
Q ss_pred EEEecChhhhhhchh-hhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEe
Q 045072 232 YLWTLPMFHANGWSY-PWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTA 308 (556)
Q Consensus 232 ~~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~ 308 (556)
+++.+|++|..++.. ++.++..|+++++.+.+++..+++.++++++|++.++|.++..+..... ...++++|.+++|
T Consensus 241 ~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~~ 320 (547)
T PRK13295 241 ILMASPMAHQTGFMYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSLRTFLCA 320 (547)
T ss_pred EEEecCchhhhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccceEEEEe
Confidence 999999999988755 6778899999998888899999999999999999999999999987654 4567789999999
Q ss_pred CCCCcHHHHHHhH-hcCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecC
Q 045072 309 GAPPPAAVLFRTE-SLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSH 387 (556)
Q Consensus 309 g~~~~~~~~~~~~-~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~ 387 (556)
|+++++++.+++. .+++++++.||+||++.+++.+.... ......++|.|.+++ .++|+|+ ++.+++.
T Consensus 321 G~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~---------~~~~~~~~G~~~~~~-~v~i~d~-~~~~~~~ 389 (547)
T PRK13295 321 GAPIPGALVERARAALGAKIVSAWGMTENGAVTLTKLDDP---------DERASTTDGCPLPGV-EVRVVDA-DGAPLPA 389 (547)
T ss_pred cCCCCHHHHHHHHHHhCCCeEEeccCCCCCCeeeccCCCc---------chhccCccccccCCc-EEEEECC-CCCCCCC
Confidence 9999999999887 56999999999999987654432110 112235789999999 9999997 6888888
Q ss_pred CCCeeeEEEEecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCC
Q 045072 388 DGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNP 467 (556)
Q Consensus 388 ~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~ 467 (556)
| +.|||+++|++++.||+++++.+... .+|||+|||+|+++++|++++.||.+|+++.+|++|+|.+||..|.+++
T Consensus 390 g--~~Gel~v~g~~~~~gY~~~~~~t~~~--~~g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~IE~~l~~~~ 465 (547)
T PRK13295 390 G--QIGRLQVRGCSNFGGYLKRPQLNGTD--ADGWFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVEIEALLYRHP 465 (547)
T ss_pred C--CCCeEEEEcCcccccccCCccccccC--CCCCeecceEEEEcCCceEEEEeccCCeEEECCEEECHHHHHHHHHhCC
Confidence 7 68999999999999999999887665 4789999999999999999999999999999999999999999999999
Q ss_pred CccccEEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHh-cCCCCcccceeEEecCCCCCCCCCccHHHHHHHHH
Q 045072 468 AVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRA-RLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAK 546 (556)
Q Consensus 468 ~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~-~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~ 546 (556)
+|.+++|++.+++..|+.++++|+..++.. ...+++.+++++ .++++++|..++++++||+|++||++|++|++++.
T Consensus 466 ~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~--~~~~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~sgK~~r~~L~~~~~ 543 (547)
T PRK13295 466 AIAQVAIVAYPDERLGERACAFVVPRPGQS--LDFEEMVEFLKAQKVAKQYIPERLVVRDALPRTPSGKIQKFRLREMLR 543 (547)
T ss_pred CeeeEEEEeeecCCCCcEEEEEEEeCCCCC--CCHHHHHHHHHhccCccccCCcEEEEeccCCCCCCccccHHHHHHHHh
Confidence 999999999998888888999998876533 567889999986 69999999999999999999999999999999886
Q ss_pred Hh
Q 045072 547 AM 548 (556)
Q Consensus 547 ~~ 548 (556)
+.
T Consensus 544 ~~ 545 (547)
T PRK13295 544 GE 545 (547)
T ss_pred cC
Confidence 53
No 16
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=3e-69 Score=561.71 Aligned_cols=504 Identities=20% Similarity=0.240 Sum_probs=402.0
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCEEEECC-ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhcc
Q 045072 10 NSSPLTPLGFLERAATVYGDCPSIIYNN-LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTG 88 (556)
Q Consensus 10 ~~~~~t~~~~l~~~~~~~p~~~a~~~~~-~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (556)
..+..++.+.|.+.++++|+++|+.+.+ +++||+||.++++++|.+|.+ .+||+|+++++|++++++++|||+++|
T Consensus 15 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~---~~gd~Val~~~n~~e~~~~~lA~~~~G 91 (539)
T PRK06334 15 LRSGKTVLESFLKLCSEMTTATVCWDEQLGKLSYNQVRKAVIALATKVSK---YPDQHIGIMMPASAGAYIAYFATLLSG 91 (539)
T ss_pred cCcCCcHHHHHHHHHHhCCCceEEEeCCCCcccHHHHHHHHHHHHHHHhh---ccCCeEEEEcCCchHHHHHHHHHHhcC
Confidence 4566889999999999999999998766 789999999999999999987 389999999999999999999999999
Q ss_pred ceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCccccc
Q 045072 89 AILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTY 168 (556)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (556)
++++|++|.++.+++.++|+++++++++++.+....+.+........ ...++...+.... .... .....
T Consensus 92 ~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~------~~~~---~~~~~ 160 (539)
T PRK06334 92 KIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEY--PFSLIYMEEVRKE------LSFW---EKCRI 160 (539)
T ss_pred CeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccc--cccEEEEehhhhh------ccHH---Hhhhh
Confidence 99999999999999999999999999999877665544432210000 1123332211000 0000 00000
Q ss_pred ccccccCCC---CCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhch
Q 045072 169 ESLVTKGDP---NFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWS 245 (556)
Q Consensus 169 ~~~~~~~~~---~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~ 245 (556)
......... .........++++++++|||||||.||+|.++|+++..+.......+++..+|++++.+|++|.+|+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~ 240 (539)
T PRK06334 161 GIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLPPFHAYGFN 240 (539)
T ss_pred hhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCCCceEEEecchHhhhhhH
Confidence 000000000 00001124578999999999999999999999999988777666677888999999999999999986
Q ss_pred h-hhHhHhcCcEeEEec-CCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHHHHhH
Q 045072 246 Y-PWGMAAVGGTNVCLR-KFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVLFRTE 321 (556)
Q Consensus 246 ~-~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~~~~~ 321 (556)
. ++.++..|+++++.. .+++..+++.|+++++|+++++|++++.+++... ...++++|.+++||+++++++.+++.
T Consensus 241 ~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~ 320 (539)
T PRK06334 241 SCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGDAFKDSLYQEAL 320 (539)
T ss_pred HHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCccCCHHHHHHHH
Confidence 5 677888999988775 5799999999999999999999999999987543 45678999999999999999999988
Q ss_pred h-c-CCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEec
Q 045072 322 S-L-GFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRG 399 (556)
Q Consensus 322 ~-~-~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~ 399 (556)
+ + ++.+++.||+||++.+++..... .....+++|.|++++ +++|+|++++.+++.| +.|||+|+|
T Consensus 321 ~~~~~~~i~~~YG~TE~~~~~~~~~~~----------~~~~~~~vG~p~~g~-~v~i~d~~~~~~~~~g--~~Gel~v~g 387 (539)
T PRK06334 321 KTFPHIQLRQGYGTTECSPVITINTVN----------SPKHESCVGMPIRGM-DVLIVSEETKVPVSSG--ETGLVLTRG 387 (539)
T ss_pred HHCCCCeEEecccccccCceEEeccCC----------CCCCCCcCceecCCC-EEEEEcCCCCccCCCC--ceEEEEEec
Confidence 4 4 68999999999998766543211 111235789999999 9999998788899888 689999999
Q ss_pred CCccccccCCCCccccC-cCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccc------c
Q 045072 400 GSMMLGYLKDPNGTRKC-MKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNE------A 472 (556)
Q Consensus 400 ~~~~~gy~~~~~~~~~~-~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~------~ 472 (556)
++++.|||++++.+... ..+++||+|||+|++|++|++++.||.+|+||.+|++|+|.+||++|.+||+|.+ +
T Consensus 388 ~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~~~v~~~~~~~~~ 467 (539)
T PRK06334 388 TSLFSGYLGEDFGQGFVELGGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEALESILMEGFGQNAADHAGPL 467 (539)
T ss_pred CcccccccCCcccccceeeCCceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHHHHHHHHHccCCccccccCce
Confidence 99999999999864432 2347899999999999999999999999999999999999999999999999997 7
Q ss_pred EEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhc-CCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHh
Q 045072 473 AVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRAR-LPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAM 548 (556)
Q Consensus 473 ~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~-l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 548 (556)
+|++.+++. ..++++++. . .+.+++.++++++ ++.|+.|..++++++||+|++||++|++|++....+
T Consensus 468 ~v~~~~~~~--~~~~~~~~~--~----~~~~~~~~~l~~~~~~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 536 (539)
T PRK06334 468 VVCGLPGEK--VRLCLFTTF--P----TSISEVNDILKNSKTSSILKISYHHQVESIPMLGTGKPDYCSLNALAKSL 536 (539)
T ss_pred EEEcCCCCc--eEEEEEEec--c----CChHHHHHHHHhcCCcccccchheeeecccccccCCcccHHHHHHHHHHh
Confidence 777776432 234444432 1 3567888999886 788999999999999999999999999999987664
No 17
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.6e-69 Score=570.88 Aligned_cols=508 Identities=25% Similarity=0.342 Sum_probs=410.9
Q ss_pred HHHHHHHHHhcCCCCEEEECC------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 045072 17 LGFLERAATVYGDCPSIIYNN------LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAI 90 (556)
Q Consensus 17 ~~~l~~~~~~~p~~~a~~~~~------~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (556)
.++|+++++.+|+++|+++.+ +++||+||.+++.++|.+|++.|+++||+|+++++|++++++++|||+++|++
T Consensus 70 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav 149 (637)
T PRK00174 70 YNCLDRHLKTRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACARIGAV 149 (637)
T ss_pred HHHHHHhhccCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCE
Confidence 467778888899999999754 47999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHHhccCCeEEEEeccch---------hhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccC
Q 045072 91 LNNINTRLDARTISVLLQHSESKLVLVDYQSR---------NLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVD 161 (556)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (556)
+++++|.++.+++.+++++++++++|+++... ..+.......+ ....++........ . . ..
T Consensus 150 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~---~---~~ 219 (637)
T PRK00174 150 HSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCP---SVEKVIVVRRTGGD-V---D---WV 219 (637)
T ss_pred EEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCC---CccEEEEEcCCCCC-c---C---cC
Confidence 99999999999999999999999999976532 22223322222 12334444322100 0 0 00
Q ss_pred CCcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhh-hhhhcCCCCCCEEEEecChhh
Q 045072 162 SNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVD-SLIDWSIPKQPVYLWTLPMFH 240 (556)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~pl~~ 240 (556)
......+.+++...... ........+++++++|||||||.||||+++|++++.+... ....+++.++|++++..|++|
T Consensus 220 ~~~~~~~~~~~~~~~~~-~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 298 (637)
T PRK00174 220 EGRDLWWHELVAGASDE-CEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTADVGW 298 (637)
T ss_pred CCCcccHHHHHhhcCCC-CCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCCchH
Confidence 00112334443322111 1122345789999999999999999999999998654433 333467888999999999999
Q ss_pred hhhchh-hhHhHhcCcEeEEecC----CCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC----CCCCCCCeEEEEeCCC
Q 045072 241 ANGWSY-PWGMAAVGGTNVCLRK----FDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR----SEPLRNPVHILTAGAP 311 (556)
Q Consensus 241 ~~g~~~-~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----~~~l~~l~~v~~~g~~ 311 (556)
..++.. ++.++..|+++++... +++..++++++++++|++.++|++++.+.+... ...++++|.++++|++
T Consensus 299 ~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~Ge~ 378 (637)
T PRK00174 299 VTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVGEP 378 (637)
T ss_pred hhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEeCCC
Confidence 988754 6778889999888752 479999999999999999999999999987653 3457899999999999
Q ss_pred CcHHHHHHhH-hcC---CeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecC
Q 045072 312 PPAAVLFRTE-SLG---FLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSH 387 (556)
Q Consensus 312 ~~~~~~~~~~-~~~---~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~ 387 (556)
+++++.+++. .++ +++++.||+||+++.+...... ......+++|.|++++ +++|+|+ +|.+++.
T Consensus 379 l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~---------~~~~~~~~vG~p~~g~-~~~i~d~-~g~~~~~ 447 (637)
T PRK00174 379 INPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPG---------ATPLKPGSATRPLPGI-QPAVVDE-EGNPLEG 447 (637)
T ss_pred CCHHHHHHHHHHhCCCCCceEecccccccCCceEecCCC---------CCCcCCCcccCCCCCc-eEEEECC-CCCCCCC
Confidence 9999998887 443 7899999999998765432110 0112245799999999 9999997 7888887
Q ss_pred CCCeeeEEEEec--CCccccccCCCCccccCc--CCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHH
Q 045072 388 DGASLGEIVFRG--GSMMLGYLKDPNGTRKCM--KDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVL 463 (556)
Q Consensus 388 ~~~~~Gel~i~~--~~~~~gy~~~~~~~~~~~--~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l 463 (556)
+ +.|||+++| |+++.|||++++.+...+ ..+|||+|||+|++|+||++++.||.+|+|+++|++|+|.+||++|
T Consensus 448 g--~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l 525 (637)
T PRK00174 448 G--EGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESAL 525 (637)
T ss_pred C--CcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEcCCCcEEEEEecccEEEeCCEEECHHHHHHHH
Confidence 7 689999999 689999999998766554 2378999999999999999999999999999999999999999999
Q ss_pred hcCCCccccEEEeecCCCCCeeeEEEEEecccccC-CCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHH
Q 045072 464 YTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEK-KPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELR 542 (556)
Q Consensus 464 ~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~-~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~ 542 (556)
.++|+|.+++|++.+++..|+.++++|++.++... +...++|.+++++++++++.|..++++++||+|++||++|++|+
T Consensus 526 ~~~~~V~~~~Vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GKi~R~~L~ 605 (637)
T PRK00174 526 VAHPKVAEAAVVGRPDDIKGQGIYAFVTLKGGEEPSDELRKELRNWVRKEIGPIAKPDVIQFAPGLPKTRSGKIMRRILR 605 (637)
T ss_pred HhCCCcceEEEEeeEcCCCCeEEEEEEEECCCCCCCHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCCcchHHHHHH
Confidence 99999999999999999889999999998876431 12257899999999999999999999999999999999999999
Q ss_pred HHHHHh
Q 045072 543 EMAKAM 548 (556)
Q Consensus 543 ~~~~~~ 548 (556)
+.+.+.
T Consensus 606 ~~~~~~ 611 (637)
T PRK00174 606 KIAEGE 611 (637)
T ss_pred HHHcCC
Confidence 987654
No 18
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-68 Score=560.80 Aligned_cols=521 Identities=28% Similarity=0.371 Sum_probs=434.3
Q ss_pred cCCCCCCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCChHHHHHHHHHh
Q 045072 6 PCTANSSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSI-GITRGHVVSVVAPNIPAMYEAHFAI 84 (556)
Q Consensus 6 ~~~~~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~-g~~~gd~V~i~~~~~~~~~~~~lA~ 84 (556)
+...+.+..|+.+.|.+.++.+|+++|+.+.++++||.||.+++.++|.+|.+. |+++||+|+++++|+++++++++||
T Consensus 2 ~~~~~~~~~tl~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~ 81 (546)
T PRK08314 2 PKSLTLPETSLFHNLEVSARRYPDKTAIVFYGRAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAI 81 (546)
T ss_pred CCCCCCCCCCHHHHHHHHHHHcCCCcceeecCceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHH
Confidence 345677889999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred hhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCC--Cc-----
Q 045072 85 PFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNK--SS----- 157 (556)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----- 157 (556)
+++|++++|++|..+.+++.++++.++++++|++.+..+.+........ ...++...... ...... ..
T Consensus 82 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~ 156 (546)
T PRK08314 82 LRANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNLR----LRHVIVAQYSD-YLPAEPEIAVPAWLR 156 (546)
T ss_pred HHcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhccC----cceEEEecchh-hcccccccCcccccc
Confidence 9999999999999999999999999999999999887766655433221 22222221100 000000 00
Q ss_pred -----cccCCCcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEE
Q 045072 158 -----QTVDSNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVY 232 (556)
Q Consensus 158 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~ 232 (556)
..........+++.+..... .......++++++++|||||||.||+|.++|.+++.++......+.+...|++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~ 234 (546)
T PRK08314 157 AEPPLQALAPGGVVAWKEALAAGLA--PPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPESVV 234 (546)
T ss_pred cccccccccccccccHHHHhcccCC--CCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCceE
Confidence 00001112234444332211 11223467899999999999999999999999999888877777788999999
Q ss_pred EEecChhhhhhchh-hhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeC
Q 045072 233 LWTLPMFHANGWSY-PWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAG 309 (556)
Q Consensus 233 ~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g 309 (556)
++.+|++|.+|+.. ++.++..|+++++.+.+++..++++++++++|++.++|.++..++.... ...++++|.+++||
T Consensus 235 l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG 314 (546)
T PRK08314 235 LAVLPLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIGGGG 314 (546)
T ss_pred EEEcCchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCchhhheeeecc
Confidence 99999999999754 6788899999999988999999999999999999999999999886543 34567899999999
Q ss_pred CCCcHHHHHHhH-hcCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCC
Q 045072 310 APPPAAVLFRTE-SLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHD 388 (556)
Q Consensus 310 ~~~~~~~~~~~~-~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~ 388 (556)
+++++++.+++. .+++++++.||+||++..+...... .....++|.|.++. +++|+|++++.+++.+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~-----------~~~~~~~G~~~~g~-~~~i~d~~~~~~~~~g 382 (546)
T PRK08314 315 AAMPEAVAERLKELTGLDYVEGYGLTETMAQTHSNPPD-----------RPKLQCLGIPTFGV-DARVIDPETLEELPPG 382 (546)
T ss_pred ccCCHHHHHHHHHHcCCcEEecccccccccceecCCCc-----------CCCCCccCcccCCe-EEEEEeCCCCcCCCCC
Confidence 999999998887 5699999999999998665432110 11235789999999 9999998789999888
Q ss_pred CCeeeEEEEecCCccccccCCCCccccCcC---CCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhc
Q 045072 389 GASLGEIVFRGGSMMLGYLKDPNGTRKCMK---DDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYT 465 (556)
Q Consensus 389 ~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~---~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~ 465 (556)
+.|||+++|++++.||+++++.+...|. +++||+|||+|+++++|.+++.||.+|+|+++|++|+|.+||+.+.+
T Consensus 383 --~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~i~~ 460 (546)
T PRK08314 383 --EVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEVENLLYK 460 (546)
T ss_pred --CceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHHHHHHHh
Confidence 6799999999999999999988877663 24699999999999999999999999999999999999999999999
Q ss_pred CCCccccEEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHH
Q 045072 466 NPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMA 545 (556)
Q Consensus 466 ~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~ 545 (556)
+|+|.+++|++.+++..|+.++++++..++.....+.+++.++++++++++++|..++++++||+|.+||++|++|++..
T Consensus 461 ~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~r~~L~~~~ 540 (546)
T PRK08314 461 HPAIQEACVIATPDPRRGETVKAVVVLRPEARGKTTEEEIIAWAREHMAAYKYPRIVEFVDSLPKSGSGKILWRQLQEQE 540 (546)
T ss_pred CcchheEEEEeCCCcccCceeEEEEEECCCCCCCCCHHHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHHH
Confidence 99999999999999888889999999887654335678999999999999999999999999999999999999998765
Q ss_pred HH
Q 045072 546 KA 547 (556)
Q Consensus 546 ~~ 547 (556)
.+
T Consensus 541 ~~ 542 (546)
T PRK08314 541 KA 542 (546)
T ss_pred hh
Confidence 44
No 19
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=7.4e-69 Score=562.68 Aligned_cols=504 Identities=26% Similarity=0.391 Sum_probs=412.9
Q ss_pred CCHHHHHHHHHHhcCCCCEEEECC--ccccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 045072 14 LTPLGFLERAATVYGDCPSIIYNN--LIYTWSQTHRRCLQLASSLSS-IGITRGHVVSVVAPNIPAMYEAHFAIPFTGAI 90 (556)
Q Consensus 14 ~t~~~~l~~~~~~~p~~~a~~~~~--~~~Ty~~l~~~~~~la~~L~~-~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (556)
.++.+.+... +.+|+++|+++.. .++||+||.++++++|++|++ .|+++||+|+++++|++++++++|||+++|++
T Consensus 40 ~~~~~~l~~~-~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la~~~~G~v 118 (560)
T PLN02574 40 LDAVSFIFSH-HNHNGDTALIDSSTGFSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAVLSLGGI 118 (560)
T ss_pred CCHHHHHhcC-cccCCCCEEEECCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHHHhCeE
Confidence 3444444433 5789999999864 479999999999999999999 99999999999999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCccccccc
Q 045072 91 LNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYES 170 (556)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (556)
+++++|.++.+++.++++.+++++++++.+....+... ...++.+.+...... . ......+.+
T Consensus 119 ~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~--~------~~~~~~~~~ 181 (560)
T PLN02574 119 VTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPL---------GVPVIGVPENYDFDS--K------RIEFPKFYE 181 (560)
T ss_pred EeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhc---------CCcEEecCccccccc--C------ccCcccHHH
Confidence 99999999999999999999999999988765544321 112232222111000 0 011123333
Q ss_pred ccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhh----hcC-CCCCCEEEEecChhhhhhch
Q 045072 171 LVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLI----DWS-IPKQPVYLWTLPMFHANGWS 245 (556)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~----~~~-~~~~~~~~~~~pl~~~~g~~ 245 (556)
++....... ......++++++++|||||||.||+|.++|+++..++..... ... ....++++..+|++|.+|+.
T Consensus 182 ~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~ 260 (560)
T PLN02574 182 LIKEDFDFV-PKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLS 260 (560)
T ss_pred HhhcCCccc-ccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHH
Confidence 333322211 112245689999999999999999999999999876654432 122 23567889999999999986
Q ss_pred h-hhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC---CCCCCCCeEEEEeCCCCcHHHHHHhH
Q 045072 246 Y-PWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR---SEPLRNPVHILTAGAPPPAAVLFRTE 321 (556)
Q Consensus 246 ~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~---~~~l~~l~~v~~~g~~~~~~~~~~~~ 321 (556)
. ++.++..|+++++.+.+++..+++.++++++|+++++|+++..+.+... ...++++|.+++||++++++..+++.
T Consensus 261 ~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~ 340 (560)
T PLN02574 261 LFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQVSCGAAPLSGKFIQDFV 340 (560)
T ss_pred HHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceEEEEecccCCHHHHHHHH
Confidence 6 4556678999988888999999999999999999999999999987653 34578999999999999999999887
Q ss_pred -hc-CCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEec
Q 045072 322 -SL-GFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRG 399 (556)
Q Consensus 322 -~~-~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~ 399 (556)
.+ ++.+++.||+||++.+++..... ......+++|.+.+++ +++|+|++++.+++.| +.||||++|
T Consensus 341 ~~~~~~~v~~~YG~tE~~~~~~~~~~~---------~~~~~~~~vG~~~~~~-~v~i~d~~~g~~~~~g--~~Gei~v~g 408 (560)
T PLN02574 341 QTLPHVDFIQGYGMTESTAVGTRGFNT---------EKLSKYSSVGLLAPNM-QAKVVDWSTGCLLPPG--NCGELWIQG 408 (560)
T ss_pred HHCCCCcEEecccccccCceeecCCCc---------cccCCCCceeeeCCCc-EEEEEeCCCCcCCCCC--CCeEEEEEC
Confidence 45 78999999999998655432111 1112346889999999 9999997789999888 689999999
Q ss_pred CCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecC
Q 045072 400 GSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPD 479 (556)
Q Consensus 400 ~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~ 479 (556)
++++.||+++++.+...|..+|||+|||+|++++||++++.||.+|+|+.+|++|++.+||..|.+||+|.+++|++.++
T Consensus 409 ~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~V~~~~v~~~~~ 488 (560)
T PLN02574 409 PGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLEAVLISHPEIIDAAVTAVPD 488 (560)
T ss_pred cchhhhhcCChhHhhhhccCCCCcccceEEEEECCCeEEEEecchhheEECCEEECHHHHHHHHHhCCCcceEEEEcccc
Confidence 99999999999999888877999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHhcc
Q 045072 480 EFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMGK 550 (556)
Q Consensus 480 ~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~~~ 550 (556)
+..|+.++++|+..++.. .+.+++.+++++++++|+.|..+.++++||+|++||++|+.|++.+.+...
T Consensus 489 ~~~g~~~~a~v~~~~~~~--~~~~~l~~~~~~~l~~~~~p~~v~~v~~iP~t~~GKi~r~~L~~~~~~~~~ 557 (560)
T PLN02574 489 KECGEIPVAFVVRRQGST--LSQEAVINYVAKQVAPYKKVRKVVFVQSIPKSPAGKILRRELKRSLTNSVS 557 (560)
T ss_pred CCCCcceEEEEEeCCCCC--CCHHHHHHHHHHhccCcccCcEEEEeeccCCCCcchhhHHHHHHHHhhccc
Confidence 888888999988776543 567899999999999999999999999999999999999999999876543
No 20
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-68 Score=554.82 Aligned_cols=489 Identities=29% Similarity=0.461 Sum_probs=419.2
Q ss_pred CHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCChHHHHHHHHHhhhccceEec
Q 045072 15 TPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSS-IGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNN 93 (556)
Q Consensus 15 t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~-~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 93 (556)
.+.++|+++|+.+|+++|+++.++.+||.||.++++++|.+|++ .|+++|++|+++++|+++++++++||+++|++++|
T Consensus 3 ~~~~~~~~~a~~~p~~~a~~~~~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~ 82 (496)
T PRK06839 3 GIAYWIEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIAVP 82 (496)
T ss_pred cHHHHHHHHHHHCCCCeEEEECCceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEe
Confidence 57889999999999999999999999999999999999999986 79999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccccccc
Q 045072 94 INTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESLVT 173 (556)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (556)
+++.++.+++.++++.+++++++++++....+.+...... ...++.+.+. ++...
T Consensus 83 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~~---------------------~~~~~ 137 (496)
T PRK06839 83 LNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVSY----VQRVISITSL---------------------KEIED 137 (496)
T ss_pred cCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhccC----cceEEEecch---------------------Hhhhc
Confidence 9999999999999999999999998876655444332211 1222222211 11111
Q ss_pred cCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchh-hhHhHh
Q 045072 174 KGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSY-PWGMAA 252 (556)
Q Consensus 174 ~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~-~~~~~~ 252 (556)
.... ...+..++++++++|||||||.||+|.++|.++..+.......+++..+++++..+|++|.+|+.. .+.++.
T Consensus 138 ~~~~---~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~ 214 (496)
T PRK06839 138 RKID---NFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLF 214 (496)
T ss_pred cCCC---CCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHh
Confidence 1111 111245679999999999999999999999998776666666678889999999999999998765 466778
Q ss_pred cCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHHHHhHhcCCeEEec
Q 045072 253 VGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVLFRTESLGFLVSHG 330 (556)
Q Consensus 253 ~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~~~~~~~~~~l~~~ 330 (556)
.|+++++.+.+++..+++.++++++|++.++|.+++.+..... ...++++|.+++||++++++..+.+.+.++++++.
T Consensus 215 ~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~g~~~~~~ 294 (496)
T PRK06839 215 AGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETTNLQSVRWFYNGGAPCPEELMREFIDRGFLFGQG 294 (496)
T ss_pred cCcEEEEccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccccCCCcccceEEECCCCCCHHHHHHHHHhCCeeEee
Confidence 8999888888999999999999999999999999999987654 44678999999999999999999988779999999
Q ss_pred ccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccCCC
Q 045072 331 YGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDP 410 (556)
Q Consensus 331 yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~ 410 (556)
||+||++..++..... ......+++|.|.++. .++|+|+ ++.+++.| +.|||+|+|++++.||++++
T Consensus 295 YG~tE~~~~~~~~~~~---------~~~~~~~~~G~p~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gy~~~~ 361 (496)
T PRK06839 295 FGMTETSPTVFMLSEE---------DARRKVGSIGKPVLFC-DYELIDE-NKNKVEVG--EVGELLIRGPNVMKEYWNRP 361 (496)
T ss_pred ccCCCCCcceEecccc---------cccccCCCCcccCCCc-eEEEECC-CcCCCCCC--CceEEEEECCCcchhhcCCh
Confidence 9999998765443211 1112346889999999 9999998 56678877 68999999999999999999
Q ss_pred CccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEE
Q 045072 411 NGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFL 490 (556)
Q Consensus 411 ~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v 490 (556)
+.+...+. +|||+|||+++++++|.+++.||.+|+|+.+|++|+|.+||+.|.++|+|.+++|++.+++..|+.++++|
T Consensus 362 ~~~~~~~~-~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v 440 (496)
T PRK06839 362 DATEETIQ-DGWLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPIAFI 440 (496)
T ss_pred HHHHHHHc-CCCeeecceEEEcCCCcEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEE
Confidence 98877776 89999999999999999999999999999999999999999999999999999999999998899999999
Q ss_pred EecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHH
Q 045072 491 SLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKA 547 (556)
Q Consensus 491 ~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 547 (556)
+..++.. ...+++.+++++.++++++|..+++++++|+|++||++|++|+++..+
T Consensus 441 ~~~~~~~--~~~~~l~~~~~~~l~~~~~P~~~~~v~~~P~t~~GKi~r~~l~~~~~~ 495 (496)
T PRK06839 441 VKKSSSV--LIEKDVIEHCRLFLAKYKIPKEIVFLKELPKNATGKIQKAQLVNQLKS 495 (496)
T ss_pred EECCCCC--CCHHHHHHHHHhhCcCCCCCcEEEEeccCCCCccccccHHHHHHHhhc
Confidence 9877554 677899999999999999999999999999999999999999987654
No 21
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.1e-68 Score=559.89 Aligned_cols=514 Identities=24% Similarity=0.342 Sum_probs=416.8
Q ss_pred CCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCChHHHHHHHHHhhhccceEe
Q 045072 14 LTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSS-IGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILN 92 (556)
Q Consensus 14 ~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~-~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (556)
.|+.+.|++.++.+|+++|++..++++||+||.++++++|++|.+ .|+++||+|+++++|++++++++|||+++|++++
T Consensus 24 ~~~~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~Ga~~v 103 (562)
T PRK05677 24 PNIQAVLKQSCQRFADKPAFSNLGKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVV 103 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEEECCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEe
Confidence 589999999999999999999988999999999999999999997 5999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCC-C-CCC---C-------CCcccc
Q 045072 93 NINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTD-H-DND---N-------KSSQTV 160 (556)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~---~-------~~~~~~ 160 (556)
|++|..+.+++.+++++++++++|++.+..+.+.+...... .+.++....... . ... . ......
T Consensus 104 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (562)
T PRK05677 104 NTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKTG----VKHVIVTEVADMLPPLKRLLINAVVKHVKKMVPAY 179 (562)
T ss_pred ecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhccC----cceeEEecccccccchhhhhcccchhhcccccccc
Confidence 99999999999999999999999998876665544432211 222332211100 0 000 0 000000
Q ss_pred CCCcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcC--CC-CCCEEEEecC
Q 045072 161 DSNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWS--IP-KQPVYLWTLP 237 (556)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~--~~-~~~~~~~~~p 237 (556)
.......+.+.+..............++++++++|||||||.||+|+++|+++..+.......+. +. ..+++++.+|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p 259 (562)
T PRK05677 180 HLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEILIAPLP 259 (562)
T ss_pred CCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEEEEcCc
Confidence 00111223333322221111122345689999999999999999999999998776554433332 33 3467899999
Q ss_pred hhhhhhchh-hhHhHhcCcEeEEec-CCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCc
Q 045072 238 MFHANGWSY-PWGMAAVGGTNVCLR-KFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPP 313 (556)
Q Consensus 238 l~~~~g~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~ 313 (556)
++|.+++.. .+..+..|++.++.+ +.++..+++.++++++|+++++|+++..+..... ...++++|.+++||++++
T Consensus 260 l~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~v~~gG~~~~ 339 (562)
T PRK05677 260 LYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKLTLSGGMALQ 339 (562)
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceEEEEcCccCC
Confidence 999999864 555666777766665 5789999999999999999999999999987653 334678999999999999
Q ss_pred HHHHHHhH-hcCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCee
Q 045072 314 AAVLFRTE-SLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASL 392 (556)
Q Consensus 314 ~~~~~~~~-~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~ 392 (556)
++..+.+. .+++++++.||+||++.++...... ....+++|.|+++. +++|+|+ ++.+++.| +.
T Consensus 340 ~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~-----------~~~~~~vG~~~~~~-~v~i~d~-~~~~~~~g--~~ 404 (562)
T PRK05677 340 LATAERWKEVTGCAICEGYGMTETSPVVSVNPSQ-----------AIQVGTIGIPVPST-LCKVIDD-DGNELPLG--EV 404 (562)
T ss_pred HHHHHHHHHHcCCCeeccCCccccCcceeecCcc-----------CCCCCccCccCCCC-EEEEECC-CCCCCCCC--CC
Confidence 99999888 4589999999999998766543211 11235799999999 9999998 68888888 68
Q ss_pred eEEEEecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCcccc
Q 045072 393 GEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEA 472 (556)
Q Consensus 393 Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~ 472 (556)
|||+++|++++.||+++++.+...|.++|||+|||+|+++++|.+++.||.+|+|+.+|.+|+|.+||+.|.++|+|.++
T Consensus 405 Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~eiE~~l~~~~~v~~~ 484 (562)
T PRK05677 405 GELCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPGVLQC 484 (562)
T ss_pred eEEEEecCccchhhcCCchhhhhccCCCCcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHHHHHHHHhCCCccEE
Confidence 99999999999999999999999998899999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHh
Q 045072 473 AVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAM 548 (556)
Q Consensus 473 ~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 548 (556)
+|++++++..|+.++++++..++.. .+.+++.+++++++++|++|..++++++||+|++||++|++|++++..+
T Consensus 485 ~v~g~~~~~~g~~~~~~v~~~~~~~--~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~sGKi~r~~L~~~~~~~ 558 (562)
T PRK05677 485 AAIGVPDEKSGEAIKVFVVVKPGET--LTKEQVMEHMRANLTGYKVPKAVEFRDELPTTNVGKILRRELRDEELKK 558 (562)
T ss_pred EEEeccCccCCceEEEEEEeCCCCC--CCHHHHHHHHHHhhhhccCCcEEEEeccCCCCCcccccHHHHHHHHHHh
Confidence 9999999888888888888765533 6788999999999999999999999999999999999999999876543
No 22
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.9e-68 Score=556.75 Aligned_cols=490 Identities=27% Similarity=0.354 Sum_probs=413.3
Q ss_pred CCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEe
Q 045072 13 PLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILN 92 (556)
Q Consensus 13 ~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (556)
+.++.+.|.++++++|+++|+++.++.+||.||.++++++|.+|.+.|+++||+|+++++|++++++++|||+++|++++
T Consensus 42 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v 121 (537)
T PRK13382 42 GMGPTSGFAIAAQRCPDRPGLIDELGTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIGADIL 121 (537)
T ss_pred cCCHHHHHHHHHHhCCCCeEEEeCCCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCcEEE
Confidence 47899999999999999999999889999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCccccccccc
Q 045072 93 NINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESLV 172 (556)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (556)
|+++.++.+++.+++++++++++|++.+....+.......+. ...++.+.+.. ....++.+.
T Consensus 122 pl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~---------------~~~~~~~~~ 183 (537)
T PRK13382 122 LLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCPQ---ATRIVAWTDED---------------HDLTVEVLI 183 (537)
T ss_pred ecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhccc---cceEEEecCCc---------------ccccHHHHh
Confidence 999999999999999999999999998776655444322211 11122221110 001122222
Q ss_pred ccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchhhhHhHh
Q 045072 173 TKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSYPWGMAA 252 (556)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~ 252 (556)
..... .. ....+++.++++|||||||.||+|.++|.+++.........+.+..+++++...|++|.+|+..++.++.
T Consensus 184 ~~~~~-~~--~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~ 260 (537)
T PRK13382 184 AAHAG-QR--PEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGFSQLVLAAS 260 (537)
T ss_pred hccCc-CC--CCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHHHHHHHHHh
Confidence 21111 11 1134578999999999999999999999888877776666777889999999999999999988888889
Q ss_pred cCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC----CCCCCCCeEEEEeCCCCcHHHHHHhH-hcCCeE
Q 045072 253 VGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR----SEPLRNPVHILTAGAPPPAAVLFRTE-SLGFLV 327 (556)
Q Consensus 253 ~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----~~~l~~l~~v~~~g~~~~~~~~~~~~-~~~~~l 327 (556)
.|+++++...+++..+++.++++++|+++++|++++.+.+... ...++++|.+++||+++++++...+. .++..+
T Consensus 261 ~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i 340 (537)
T PRK13382 261 LACTIVTRRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQFGDVI 340 (537)
T ss_pred cCcEEEECCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHcCCcE
Confidence 9999888888999999999999999999999999999987643 22456899999999999999999887 568899
Q ss_pred EecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCcccccc
Q 045072 328 SHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYL 407 (556)
Q Consensus 328 ~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~ 407 (556)
++.||+||++.++..+.. ......+++|.|.+++ .++|+|+ ++.+++.| +.|||+++|++++.||+
T Consensus 341 ~~~YG~TE~~~~~~~~~~----------~~~~~~~~vG~p~~~~-~~~i~d~-~~~~~~~g--~~GEl~v~g~~~~~gY~ 406 (537)
T PRK13382 341 YNNYNATEAGMIATATPA----------DLRAAPDTAGRPAEGT-EIRILDQ-DFREVPTG--EVGTIFVRNDTQFDGYT 406 (537)
T ss_pred EecccccccCcceecChh----------HhccCCCCccccCcCc-EEEEECC-CCCCCCCC--CeeEEEEEcCCcccCcc
Confidence 999999999876554321 1122346899999999 9999998 68888887 68999999999999998
Q ss_pred CCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeE
Q 045072 408 KDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPC 487 (556)
Q Consensus 408 ~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~ 487 (556)
++.+. .+. +|||+|||++++++||++++.||.+|+||.+|++|++.+||..|.++|+|.+++|++.+++..|+.++
T Consensus 407 --~~~~~-~~~-~g~~~TGDl~~~~~~g~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~ 482 (537)
T PRK13382 407 --SGSTK-DFH-DGFMASGDVGYLDENGRLFVVGRDDEMIVSGGENVYPIEVEKTLATHPDVAEAAVIGVDDEQYGQRLA 482 (537)
T ss_pred --ccchh-hcc-CCCEeeCceEEEeCCCcEEEeccccceeEECCEEECHHHHHHHHHhCCCEeeEEEEccCccccCCEEE
Confidence 33332 344 79999999999999999999999999999999999999999999999999999999999988888999
Q ss_pred EEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHH
Q 045072 488 AFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELRE 543 (556)
Q Consensus 488 ~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~ 543 (556)
++|+..++.. ...+++.++++++++.+++|..++++++||+|++||++|++|++
T Consensus 483 a~vv~~~~~~--~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~gK~~r~~L~~ 536 (537)
T PRK13382 483 AFVVLKPGAS--ATPETLKQHVRDNLANYKVPRDIVVLDELPRGATGKILRRELQA 536 (537)
T ss_pred EEEEECCCCC--CCHHHHHHHHHHhccCCCCCcEEEEeccCCCCCCCCCcHHhhCC
Confidence 9998876543 67789999999999999999999999999999999999999864
No 23
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=4.3e-68 Score=555.12 Aligned_cols=506 Identities=27% Similarity=0.401 Sum_probs=424.7
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEEC--CccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhcc
Q 045072 11 SSPLTPLGFLERAATVYGDCPSIIYN--NLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTG 88 (556)
Q Consensus 11 ~~~~t~~~~l~~~~~~~p~~~a~~~~--~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (556)
..+.|+.+++.++++.+|+++|+++. ++++||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|
T Consensus 20 ~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~la~~~~G 99 (537)
T PLN02246 20 PNHLPLHDYCFERLSEFSDRPCLIDGATGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRRG 99 (537)
T ss_pred CCCCcHHHHHHHHHHhCCCCeEEEecCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHHcC
Confidence 33568999999999999999999875 4789999999999999999999999999999999999999999999999999
Q ss_pred ceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCccccc
Q 045072 89 AILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTY 168 (556)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (556)
++++|++|..+.+++..+++.+++++++++....+.+.+..... ...++..++.. .....+
T Consensus 100 ~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~-----~~~~i~~~~~~--------------~~~~~~ 160 (537)
T PLN02246 100 AVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAEDD-----GVTVVTIDDPP--------------EGCLHF 160 (537)
T ss_pred EEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhcC-----CceEEEeCCCC--------------CCceeH
Confidence 99999999999999999999999999999887766655443211 11233332211 111223
Q ss_pred ccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhh----hcCCCCCCEEEEecChhhhhhc
Q 045072 169 ESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLI----DWSIPKQPVYLWTLPMFHANGW 244 (556)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~----~~~~~~~~~~~~~~pl~~~~g~ 244 (556)
.++......... .....++++++++|||||||.||+|.++|+++..+...... .+.+..+|++++.+|++|.+++
T Consensus 161 ~~~~~~~~~~~~-~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~ 239 (537)
T PLN02246 161 SELTQADENELP-EVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSL 239 (537)
T ss_pred HHHhcCCCCCCC-CCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHH
Confidence 333322211111 12345789999999999999999999999999876654432 4568899999999999999997
Q ss_pred hh-hhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHHHHhH
Q 045072 245 SY-PWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVLFRTE 321 (556)
Q Consensus 245 ~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~~~~~ 321 (556)
.. ++.++..|+++++.+.+++..+++.++++++|++.++|.++..+.+... ...++++|.+++||+++++++.+.+.
T Consensus 240 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~ 319 (537)
T PLN02246 240 NSVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSIRMVLSGAAPLGKELEDAFR 319 (537)
T ss_pred HHHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCccceeEEEEecCcCCHHHHHHHH
Confidence 65 5667888999999988999999999999999999999999999987654 34567899999999999999999888
Q ss_pred h-c-CCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEec
Q 045072 322 S-L-GFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRG 399 (556)
Q Consensus 322 ~-~-~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~ 399 (556)
+ + +..+++.||+||++.+++.+..... .......+++|.|.++. +++|+|++++.+++.+ +.|||+++|
T Consensus 320 ~~~~~~~~~~~YG~tE~~~~~~~~~~~~~------~~~~~~~~~~G~~~~~~-~~~i~d~~~~~~~~~g--~~Gel~v~g 390 (537)
T PLN02246 320 AKLPNAVLGQGYGMTEAGPVLAMCLAFAK------EPFPVKSGSCGTVVRNA-ELKIVDPETGASLPRN--QPGEICIRG 390 (537)
T ss_pred HHcCCCeEeccccccccCcccccccccCC------CCccccCCccccccCCc-EEEEecCCCCCcCCCC--CceEEEEEC
Confidence 4 4 7789999999999876543211000 00112235789999998 9999998789999988 679999999
Q ss_pred CCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecC
Q 045072 400 GSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPD 479 (556)
Q Consensus 400 ~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~ 479 (556)
+.++.||+++++.+...+..++||+|||+|++++||++++.||.+|+|+.+|++|+|.+||+.+.++|+|.+++|++.++
T Consensus 391 ~~~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~ 470 (537)
T PLN02246 391 PQIMKGYLNDPEATANTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLISHPSIADAAVVPMKD 470 (537)
T ss_pred CchhccccCCchhhhhcccCCCCeeecceEEEeCCCeEEEEecccceEEECCEEECcHHHHHHHHhCCCeeEEEEEcccC
Confidence 99999999999999888877999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHH
Q 045072 480 EFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKA 547 (556)
Q Consensus 480 ~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 547 (556)
+..|+.++++++..++.. .+.+++.+++++++++++.|..++++++||+|++||++|++|++++.+
T Consensus 471 ~~~~~~~~~~v~~~~~~~--~~~~~l~~~l~~~l~~~~~p~~i~~~~~~P~t~~GKi~r~~L~~~~~~ 536 (537)
T PLN02246 471 EVAGEVPVAFVVRSNGSE--ITEDEIKQFVAKQVVFYKRIHKVFFVDSIPKAPSGKILRKDLRAKLAA 536 (537)
T ss_pred ccCCceeEEEEEeCCCCC--CCHHHHHHHHHhhCcCccccceEEEeccCCCCCcchhhHHHHHHHHhc
Confidence 888888899888776543 567899999999999999999999999999999999999999998753
No 24
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.4e-69 Score=574.41 Aligned_cols=518 Identities=20% Similarity=0.234 Sum_probs=397.0
Q ss_pred CCHHHHHHHHHHhcCCCCEEEEC----C-----ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHh
Q 045072 14 LTPLGFLERAATVYGDCPSIIYN----N-----LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAI 84 (556)
Q Consensus 14 ~t~~~~l~~~~~~~p~~~a~~~~----~-----~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~ 84 (556)
.|+.++|+++++.+|+++|+.+. + .++||+||.++++++|.+|++.|+++||+|+|+++|+++|++++|||
T Consensus 45 ~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~ 124 (666)
T PLN02614 45 DSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEAC 124 (666)
T ss_pred CcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 49999999999999999999842 1 24899999999999999999999999999999999999999999999
Q ss_pred hhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCc
Q 045072 85 PFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNF 164 (556)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (556)
+++|++++|+++.++.+++.+++++++++++|++.+....+........ .....++.+++...... .........
T Consensus 125 ~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~--~~l~~vi~~~~~~~~~~---~~~~~~~~~ 199 (666)
T PLN02614 125 NAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNST--EYMKTVVSFGGVSREQK---EEAETFGLV 199 (666)
T ss_pred HHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhccccc--ccceEEEEeCCCChHHh---hhhhhcCcE
Confidence 9999999999999999999999999999999998765443322211110 00223444432110000 000000001
Q ss_pred ccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhc-----CCCCCCEEEEecChh
Q 045072 165 CCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDW-----SIPKQPVYLWTLPMF 239 (556)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~-----~~~~~~~~~~~~pl~ 239 (556)
...+++++..............++|+++|+|||||||.||||++||+++...+......+ .+..+|++++.+|++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~ 279 (666)
T PLN02614 200 IYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLA 279 (666)
T ss_pred EEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHH
Confidence 133444443322111111224578999999999999999999999999987765543332 467899999999999
Q ss_pred hhhhchhhhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC------------------------
Q 045072 240 HANGWSYPWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR------------------------ 295 (556)
Q Consensus 240 ~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~------------------------ 295 (556)
|.+++...+.++..|+++++.+ .++..+++.+++++||+++++|++++.+.....
T Consensus 280 H~~~~~~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 358 (666)
T PLN02614 280 HIFDRVIEECFIQHGAAIGFWR-GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFGN 358 (666)
T ss_pred HHHHHHHHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 9999876666677888887764 689999999999999999999999987763110
Q ss_pred ---------C-------------CCC-CCCeEEEEeCCCCcHHHHHHhHhc-CCeEEecccccccccceeeccccccccC
Q 045072 296 ---------S-------------EPL-RNPVHILTAGAPPPAAVLFRTESL-GFLVSHGYGLTETAGLVVSCAWKNKWNR 351 (556)
Q Consensus 296 ---------~-------------~~l-~~l~~v~~~g~~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~~~~~~~~~~ 351 (556)
. ..+ +++|.+++||+++++...+.++.+ ++.+++.||+||+++.++....
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~------ 432 (666)
T PLN02614 359 MKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHVESFLRVVACCHVLQGYGLTESCAGTFVSLP------ 432 (666)
T ss_pred HHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHhcCCCEEeeCchHhhhhheeeecc------
Confidence 0 011 589999999999998765555565 5899999999999765433210
Q ss_pred CChhhhccccccCccccceeeeeEEecCCC--CceecCCCCeeeEEEEecCCccccccCCCCccccCcCCCCceecCceE
Q 045072 352 LPATERARMKSRQGVRTVCFTEIDVIDSES--GLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVG 429 (556)
Q Consensus 352 ~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~--~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~ 429 (556)
. .....+++|.|.+++ +++|+|.++ +.+++.+ +.|||+|+||+++.|||++|+.+...|. +|||+|||+|
T Consensus 433 ---~-~~~~~gsvG~p~pg~-evki~d~~~~~~~~~~~g--~~GEl~vrGp~v~~GY~~~pe~T~~~f~-dGw~~TGDlg 504 (666)
T PLN02614 433 ---D-ELDMLGTVGPPVPNV-DIRLESVPEMEYDALAST--PRGEICIRGKTLFSGYYKREDLTKEVLI-DGWLHTGDVG 504 (666)
T ss_pred ---c-cCCcCCcccCcCCce-EEEEeeecccCcccCCCC--CCceEEEcCCcccccccCCHHHhhhhhc-cCCcccceEE
Confidence 0 011246899999999 999998322 4567766 6799999999999999999999999997 8999999999
Q ss_pred EEecCCcEEEEccCCCeEe-eCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEecccccC--------C-
Q 045072 430 VIHADGYLEIKDRSKDVII-SGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEK--------K- 499 (556)
Q Consensus 430 ~~~~dg~l~~~GR~~d~i~-~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~--------~- 499 (556)
++|+||+|++.||.+|+|| .+|++|+|.+||++|.+||.|.+++|++.... ..++|+|+++.+.-. .
T Consensus 505 ~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~~~V~g~~~~---~~l~alvv~~~~~~~~~~~~~~~~~ 581 (666)
T PLN02614 505 EWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYGNSFE---SFLVAIANPNQQILERWAAENGVSG 581 (666)
T ss_pred EEcCCCCEEEEEcchhceecCCCeeecHHHHHHHHhcCCCeeEEEEEecCCc---ceEEEEEeCCHHHHHHHHHhcCCCc
Confidence 9999999999999999999 57999999999999999999999999998742 248899887654200 0
Q ss_pred ---------CCHHHHHHHH-----HhcCCCCcccceeEEecC-C-----CCCCCCCccHHHHHHHHHHhcccccc
Q 045072 500 ---------PTEKEIIEYC-----RARLPRYMVPKTVVFKEE-L-----PKTSTGKIKKFELREMAKAMGKSKVS 554 (556)
Q Consensus 500 ---------~~~~~i~~~l-----~~~l~~~~~p~~~~~v~~-l-----P~t~~GKv~r~~l~~~~~~~~~~~~~ 554 (556)
...+.+.+.+ ++.|+.|..++.|.++++ + -+|+++|++|..+++.|++.++.-|+
T Consensus 582 ~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~l~~~~f~~~ng~lTpt~K~kR~~i~~~y~~~i~~ly~ 656 (666)
T PLN02614 582 DYNALCQNEKAKEFILGELVKMAKEKKMKGFEIIKAIHLDPVPFDMERDLLTPTFKKKRPQLLKYYQSVIDEMYK 656 (666)
T ss_pred CHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCCcCCcCCHhhhhhHHHHHHHHHHHHHHHHH
Confidence 0112233333 345999999999988873 3 39999999999999999998876654
No 25
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.5e-68 Score=562.00 Aligned_cols=505 Identities=25% Similarity=0.392 Sum_probs=418.8
Q ss_pred HHHHHHHHHH-hcCCCCEEEECC----ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 045072 16 PLGFLERAAT-VYGDCPSIIYNN----LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAI 90 (556)
Q Consensus 16 ~~~~l~~~~~-~~p~~~a~~~~~----~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (556)
..+.+++++. .+|+++|+.+.+ +++||+||.++++++|.+|.+.|+++||+|+++++|++++++++|||+++|++
T Consensus 45 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~G~v 124 (570)
T PRK04319 45 AYEAIDRHADGGRKDKVALRYLDASRKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFALLGALKNGAI 124 (570)
T ss_pred HHHHHHHhhccCCCCceEEEEECCCCceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCcE
Confidence 3467777776 479999998854 68999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCccccccc
Q 045072 91 LNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYES 170 (556)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (556)
++|+++.++.+++.++++++++++++++......... ...+. ...++.+++... .......+.+
T Consensus 125 ~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~-----------~~~~~~~~~~ 188 (570)
T PRK04319 125 VGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPA--DDLPS---LKHVLLVGEDVE-----------EGPGTLDFNA 188 (570)
T ss_pred EcccccccCHHHHHHHHHccCCcEEEEChhhhhccch--hcCCC---ceEEEEECCCcC-----------CCcCccCHHH
Confidence 9999999999999999999999999998765443221 11111 223333332210 0011123444
Q ss_pred ccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchh-hhH
Q 045072 171 LVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSY-PWG 249 (556)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~-~~~ 249 (556)
.+........ ..+..++++++++|||||||.||+|.++|++++.+.......+++.++|++++..|++|..|+.. ++.
T Consensus 189 ~~~~~~~~~~-~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~ 267 (570)
T PRK04319 189 LMEQASDEFD-IEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHEDDVYWCTADPGWVTGTSYGIFA 267 (570)
T ss_pred HHhhcCCcCC-ccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCCCceEEecCChHHhhCchHHHHH
Confidence 4333222211 12345679999999999999999999999999887777777778899999999999999888654 778
Q ss_pred hHhcCcEeEEec-CCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC----CCCCCCCeEEEEeCCCCcHHHHHHhH-hc
Q 045072 250 MAAVGGTNVCLR-KFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR----SEPLRNPVHILTAGAPPPAAVLFRTE-SL 323 (556)
Q Consensus 250 ~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----~~~l~~l~~v~~~g~~~~~~~~~~~~-~~ 323 (556)
++..|+++++.. .+++..++++++++++|+++++|++++.+.+... ...++++|.++++|+++++++.+++. .+
T Consensus 268 ~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~ 347 (570)
T PRK04319 268 PWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVGEPLNPEVVRWGMKVF 347 (570)
T ss_pred HHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEcccCCCHHHHHHHHHHh
Confidence 889999988875 5899999999999999999999999999987542 34578999999999999999999888 56
Q ss_pred CCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEec--CC
Q 045072 324 GFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRG--GS 401 (556)
Q Consensus 324 ~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~--~~ 401 (556)
+.++++.||+||+++++...... .....+++|.|.++. +++|+|+ ++.+++.| +.|||+++| +.
T Consensus 348 g~~i~~~YG~tE~~~~~~~~~~~----------~~~~~~~~G~p~~g~-~~~i~d~-~~~~~~~g--~~Gel~i~~~~~~ 413 (570)
T PRK04319 348 GLPIHDNWWMTETGGIMIANYPA----------MDIKPGSMGKPLPGI-EAAIVDD-QGNELPPN--RMGNLAIKKGWPS 413 (570)
T ss_pred CCCeEeceeecccCCEEEecCCC----------CCCCCCcCcCCCCCC-EEEEECC-CCCCCCCC--CceEEEEcCCCCh
Confidence 89999999999998765432110 112246899999999 9999997 67788777 789999997 89
Q ss_pred ccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCC
Q 045072 402 MMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEF 481 (556)
Q Consensus 402 ~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~ 481 (556)
++.||+++++.+...|. +|||+|||+++++++|++++.||.+|+|+.+|++|+|.+||+.+.++|.|.+++|++.+++.
T Consensus 414 ~~~GY~~~~~~~~~~~~-~gw~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~V~~~~v~g~~~~~ 492 (570)
T PRK04319 414 MMRGIWNNPEKYESYFA-GDWYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPFEVESKLMEHPAVAEAGVIGKPDPV 492 (570)
T ss_pred HHhHhcCCHHHhhhhhc-CCceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHHHHHHHHhhCCCeeecceecccCcC
Confidence 99999999999988888 89999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCeeeEEEEEecccccC-CCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHhcccc
Q 045072 482 WGETPCAFLSLKAELEK-KPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMGKSK 552 (556)
Q Consensus 482 ~g~~~~~~v~~~~~~~~-~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~~~~~ 552 (556)
.|+.++++++..++... +...+++.++++++++.|++|..++++++||+|++||++|++|+++..+....+
T Consensus 493 ~g~~~~a~v~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~~~~~~ 564 (570)
T PRK04319 493 RGEIIKAFVALRPGYEPSEELKEEIRGFVKKGLGAHAAPREIEFKDKLPKTRSGKIMRRVLKAWELGLPEGD 564 (570)
T ss_pred CceEEEEEEEECCCCCCCHHHHHHHHHHHHHhcccccCCcEEEEeCCCCCCCchhhhHHHHHHHHhCCCcCc
Confidence 89999999988775431 123468999999999999999999999999999999999999999976544433
No 26
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=5e-68 Score=553.81 Aligned_cols=505 Identities=28% Similarity=0.373 Sum_probs=422.7
Q ss_pred cCCCCCCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhh
Q 045072 6 PCTANSSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIP 85 (556)
Q Consensus 6 ~~~~~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~ 85 (556)
+.+.|..+.++.++|+++++.+|+++|+++.++++||.||.+++.++|.+|.+.|+++|++|+++++|++++++++|||+
T Consensus 13 ~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~ 92 (542)
T PRK06155 13 VDPLPPSERTLPAMLARQAERYPDRPLLVFGGTRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCA 92 (542)
T ss_pred cccCCccccCHHHHHHHHHHHCCCCeEEEeCCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHH
Confidence 45667788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcc
Q 045072 86 FTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFC 165 (556)
Q Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (556)
++|++++|+++.++.+++.++++++++++++++.+....+........ ....++.++..... . . ...
T Consensus 93 ~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~---~---~----~~~ 159 (542)
T PRK06155 93 WLGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDL---PLPAVWLLDAPASV---S---V----PAG 159 (542)
T ss_pred HhCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhccccc---CcceEEEecCcccc---c---c----ccc
Confidence 999999999999999999999999999999999877666554332211 12334443322110 0 0 000
Q ss_pred cccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhch
Q 045072 166 CTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWS 245 (556)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~ 245 (556)
....+... .... ....+..++++++++|||||||.||+|.++|.++..........+++..++++++.+|++|..++.
T Consensus 160 ~~~~~~~~-~~~~-~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~~~~ 237 (542)
T PRK06155 160 WSTAPLPP-LDAP-APAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNALN 237 (542)
T ss_pred cchhhhcc-cCCC-CCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHHHHH
Confidence 00001110 0000 111234568999999999999999999999999987776666777889999999999999999998
Q ss_pred hhhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHHHHhH-h
Q 045072 246 YPWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVLFRTE-S 322 (556)
Q Consensus 246 ~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~~~~~-~ 322 (556)
.++.++..|+++++...+++..+++.++++++|+++++|+++..+.+... .....+++.++.+| .++.+.+.+. .
T Consensus 238 ~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~g~--~~~~~~~~~~~~ 315 (542)
T PRK06155 238 AFFQALLAGATYVLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAHRVRVALGPG--VPAALHAAFRER 315 (542)
T ss_pred HHHHHHHcCceEEeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccCceEEEEEcC--CCHHHHHHHHHH
Confidence 88899999999999888999999999999999999999999999987765 23455777766555 5677777776 6
Q ss_pred cCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecC--
Q 045072 323 LGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGG-- 400 (556)
Q Consensus 323 ~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~-- 400 (556)
+++++++.||+||++.++..... ....+.+|.+.++. +++|+|+ ++.+++.+ +.|||+++|+
T Consensus 316 ~~~~v~~~YG~tE~~~~~~~~~~------------~~~~~~vG~~~~~~-~~~i~d~-~~~~~~~g--~~Gei~v~~~~~ 379 (542)
T PRK06155 316 FGVDLLDGYGSTETNFVIAVTHG------------SQRPGSMGRLAPGF-EARVVDE-HDQELPDG--EPGELLLRADEP 379 (542)
T ss_pred cCCCEEeeecccccCccccCCCC------------CCCCCCcCccCCCc-eEEEECC-CCCCCCCC--CceEEEEecCCc
Confidence 69999999999999876543210 12345789999998 9999997 68888888 6899999998
Q ss_pred -CccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecC
Q 045072 401 -SMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPD 479 (556)
Q Consensus 401 -~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~ 479 (556)
.++.||+++++.+...|. ++||+|||+|++++||++++.||.+|+|+.+|.+|+|.+||+++.++|+|.+++|++.++
T Consensus 380 ~~~~~GY~~~~~~~~~~~~-~~~~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~v~~ 458 (542)
T PRK06155 380 FAFATGYFGMPEKTVEAWR-NLWFHTGDRVVRDADGWFRFVDRIKDAIRRRGENISSFEVEQVLLSHPAVAAAAVFPVPS 458 (542)
T ss_pred cccchhhcCCHHHHHHhhc-CCcEeccceEEEcCCceEEEEecCCCEEEeCCEEECHHHHHHHHHhCCCeeEEEEEeecc
Confidence 699999999988887776 899999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHH
Q 045072 480 EFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAK 546 (556)
Q Consensus 480 ~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~ 546 (556)
+..++.+.++++..++.. .+..++.++++++++.+++|..++++++||+|++||++|++|++++-
T Consensus 459 ~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~l~~~~~ 523 (542)
T PRK06155 459 ELGEDEVMAAVVLRDGTA--LEPVALVRHCEPRLAYFAVPRYVEFVAALPKTENGKVQKFVLREQGV 523 (542)
T ss_pred cccCceEEEEEEECCCCC--CCHHHHHHHHHhhCcCccCCcEEEEeccCCCCcccceeHHHHHhhcc
Confidence 877788888888766544 67889999999999999999999999999999999999999998763
No 27
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=3.7e-68 Score=549.56 Aligned_cols=480 Identities=30% Similarity=0.476 Sum_probs=413.6
Q ss_pred CCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEec
Q 045072 14 LTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNN 93 (556)
Q Consensus 14 ~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 93 (556)
+|+.++|++++.++||++|+.+.++.+||+||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|+++++
T Consensus 2 ~~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 81 (483)
T PRK03640 2 ETMPNWLKQRAFLTPDRTAIEFEEKKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLGAVAVL 81 (483)
T ss_pred CcHHHHHHHHHHhCCCceEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCcEEEe
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccccccc
Q 045072 94 INTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESLVT 173 (556)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (556)
+++..+.+++.++++.++++.++++++.......... ..++++..
T Consensus 82 i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~-----------------------------------~~~~~~~~ 126 (483)
T PRK03640 82 LNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGIS-----------------------------------VKFAELMN 126 (483)
T ss_pred cCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhcc-----------------------------------ccHHHHhh
Confidence 9999999999999999999999998765443221100 00111111
Q ss_pred cCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchhhhHhHhc
Q 045072 174 KGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAV 253 (556)
Q Consensus 174 ~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~ 253 (556)
..............+++++++|||||||.||+|.++|.++...+......+++.++|++++.+|++|.+++..++.++..
T Consensus 127 ~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~ 206 (483)
T PRK03640 127 GPKEEAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGLSILMRSVIY 206 (483)
T ss_pred cccccCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHHHHHHHHHhc
Confidence 11011111112356799999999999999999999999998877666667789999999999999999999888889999
Q ss_pred CcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC-CCCCCCCeEEEEeCCCCcHHHHHHhHhcCCeEEeccc
Q 045072 254 GGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR-SEPLRNPVHILTAGAPPPAAVLFRTESLGFLVSHGYG 332 (556)
Q Consensus 254 g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~-~~~l~~l~~v~~~g~~~~~~~~~~~~~~~~~l~~~yG 332 (556)
|+++++.+..++..+++.++++++|++.++|+++..+.+... .....++|.++++|+++++...+.+.+.++++++.||
T Consensus 207 G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~YG 286 (483)
T PRK03640 207 GMRVVLVEKFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEGTYPSSFRCMLLGGGPAPKPLLEQCKEKGIPVYQSYG 286 (483)
T ss_pred CCEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCccccCCcceEEEEcCCCCCHHHHHHHHHhCCCeeeeec
Confidence 999999988999999999999999999999999999986544 2334689999999999999999988888999999999
Q ss_pred ccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccCCCCc
Q 045072 333 LTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNG 412 (556)
Q Consensus 333 ~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~ 412 (556)
+||++..++.... .......+++|.|.+++ +++|.|+ +.+++.+ +.|||+++|++++.||+++++.
T Consensus 287 ~tE~~~~~~~~~~---------~~~~~~~~~vG~p~~~~-~~~i~~~--~~~~~~g--~~Gel~v~g~~~~~gy~~~~~~ 352 (483)
T PRK03640 287 MTETASQIVTLSP---------EDALTKLGSAGKPLFPC-ELKIEKD--GVVVPPF--EEGEIVVKGPNVTKGYLNREDA 352 (483)
T ss_pred cCcccccccccCc---------ccccccCCCcccccCCc-EEEEecC--CCcCCCC--CceEEEEECcchhhhhcCCHHH
Confidence 9998765433221 11122346899999999 9999986 3677776 6799999999999999999998
Q ss_pred cccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEe
Q 045072 413 TRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSL 492 (556)
Q Consensus 413 ~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~ 492 (556)
+...|. ++||+|||++++++||.+++.||.+|+++.+|.+|++.+||..+.++++|.+++|++.+++..++.++++++.
T Consensus 353 ~~~~~~-~~~~~tGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~ie~~i~~~~~v~~~~v~~~~~~~~~~~~~~~~~~ 431 (483)
T PRK03640 353 TRETFQ-DGWFKTGDIGYLDEEGFLYVLDRRSDLIISGGENIYPAEIEEVLLSHPGVAEAGVVGVPDDKWGQVPVAFVVK 431 (483)
T ss_pred HHHHHh-cCCeeccceEEEcCCCCEEEeecccCeEEeCCEEECHHHHHHHHHhCCCeeEEEEEeCCCcccCCceEEEEEe
Confidence 888876 8999999999999999999999999999999999999999999999999999999999888778888887775
Q ss_pred cccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHH
Q 045072 493 KAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKA 547 (556)
Q Consensus 493 ~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 547 (556)
... .+.+++.++++++++++++|..++++++||+|++||++|++|++++.+
T Consensus 432 ~~~----~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gK~~r~~l~~~~~~ 482 (483)
T PRK03640 432 SGE----VTEEELRHFCEEKLAKYKVPKRFYFVEELPRNASGKLLRHELKQLVEE 482 (483)
T ss_pred CCC----CCHHHHHHHHHHhccCCCCCcEEEEeCCCCCCCccceeHHHHHHHHhh
Confidence 432 578899999999999999999999999999999999999999999875
No 28
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.4e-68 Score=552.77 Aligned_cols=518 Identities=27% Similarity=0.411 Sum_probs=426.0
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhcc
Q 045072 9 ANSSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTG 88 (556)
Q Consensus 9 ~~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (556)
....++|+.+++.+.++.+|+++|+.+.++++||+||.++++++|..|.+.|+++||+|+++++|+++++++++||+++|
T Consensus 2 ~~~~~~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G 81 (528)
T PRK07470 2 MSRRVMNLAHFLRQAARRFPDRIALVWGDRSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLG 81 (528)
T ss_pred CcccCCCHHHHHHHHHHHCCCceEEEECCccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCC
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCccccc
Q 045072 89 AILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTY 168 (556)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (556)
++++++++.++.+++.++++.++++.++++.+..+........... ...++....... ...+
T Consensus 82 ~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---------------~~~~ 143 (528)
T PRK07470 82 AVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASPD---LTHVVAIGGARA---------------GLDY 143 (528)
T ss_pred eEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCCc---CceEEEeCCCcc---------------cccH
Confidence 9999999999999999999999999999998766554443322211 223333322110 1223
Q ss_pred ccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhh--cCCCCCCEEEEecChhhhhhchh
Q 045072 169 ESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLID--WSIPKQPVYLWTLPMFHANGWSY 246 (556)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~pl~~~~g~~~ 246 (556)
.+++...............+++++++|||||||.||+|.++|.++.......... .+....|+++..+|++|..++..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~ 223 (528)
T PRK07470 144 EALVARHLGARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIHQ 223 (528)
T ss_pred HHHHhcCCCCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHHH
Confidence 3333222111111123456899999999999999999999999986544332222 24677899999999999998876
Q ss_pred hhHhHhcCcEeEEec--CCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHHHHhH-
Q 045072 247 PWGMAAVGGTNVCLR--KFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVLFRTE- 321 (556)
Q Consensus 247 ~~~~~~~g~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~~~~~- 321 (556)
++ .+..|++.++++ .+++..+++.++++++|+++++|++++.+.+.+. ...++++|.+++||+++++...+++.
T Consensus 224 ~~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~ 302 (528)
T PRK07470 224 LC-QVARGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHSSLRYVIYAGAPMYRADQKRALA 302 (528)
T ss_pred HH-HHhcCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCcceEEEEEcCCCCCHHHHHHHHH
Confidence 54 566777776665 4789999999999999999999999999987654 34577999999999999999988876
Q ss_pred hcCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCC
Q 045072 322 SLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGS 401 (556)
Q Consensus 322 ~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~ 401 (556)
.++..+++.||+||+++.+........ ... .......+++|.+.+++ .++|+|+ ++.+++.+ +.|||+++|+.
T Consensus 303 ~~g~~~~~~YG~TE~~~~~~~~~~~~~--~~~-~~~~~~~~~~G~~~~g~-~~~i~d~-~~~~~~~g--~~Gel~i~~~~ 375 (528)
T PRK07470 303 KLGKVLVQYFGLGEVTGNITVLPPALH--DAE-DGPDARIGTCGFERTGM-EVQIQDD-EGRELPPG--ETGEICVIGPA 375 (528)
T ss_pred HhCcHHHHhCCCcccCCceeecchhhc--ccc-ccccceeeccCcccCCc-EEEEECC-CCCCCCCC--CceEEEEeCCc
Confidence 568899999999999876554321100 000 00122346889999999 9999997 78888887 68999999999
Q ss_pred ccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCC
Q 045072 402 MMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEF 481 (556)
Q Consensus 402 ~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~ 481 (556)
++.||+++++.+...|. ++||+|||++++++||++++.||.+|+|+++|++|+|.+||..+.+++.|.+++|++.+++.
T Consensus 376 ~~~gy~~~~~~~~~~~~-~~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~ 454 (528)
T PRK07470 376 VFAGYYNNPEANAKAFR-DGWFRTGDLGHLDARGFLYITGRASDMYISGGSNVYPREIEEKLLTHPAVSEVAVLGVPDPV 454 (528)
T ss_pred cchhhcCCHHHHHhhhc-CCcEecceeEEEccCCeEEEeCCccceEEeCCEEECHHHHHHHHHhCCCceEEEEEeccCcc
Confidence 99999999998887776 89999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHhccccccC
Q 045072 482 WGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMGKSKVSR 555 (556)
Q Consensus 482 ~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~~~~~~~~ 555 (556)
.|+.++++++..++.. .+.+++.++++++++++++|..++++++||+|++||++|+.|++++.++....+.+
T Consensus 455 ~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~~~~~~~ 526 (528)
T PRK07470 455 WGEVGVAVCVARDGAP--VDEAELLAWLDGKVARYKLPKRFFFWDALPKSGYGKITKKMVREELEERGLLDLER 526 (528)
T ss_pred cCceeEEEEEECCCCC--CCHHHHHHHHHHhhhcCCCCcEEEEeccCCCCCcccccHHHHHHHHHhcccccccc
Confidence 7888888888766543 57789999999999999999999999999999999999999999999887765543
No 29
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.5e-68 Score=551.08 Aligned_cols=506 Identities=32% Similarity=0.507 Sum_probs=431.6
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 045072 11 SSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAI 90 (556)
Q Consensus 11 ~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (556)
+...++.+.|.+.++.+|+++|+.+.++++||.||.+.+.++|..|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 2 ~~~~~i~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G~~ 81 (513)
T PRK07656 2 NEWMTLPELLARAARRFGDKEAYVFGDQRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAGAV 81 (513)
T ss_pred CccccHHHHHHHHHHHCCCCeEEEeCCCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeE
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCccccccc
Q 045072 91 LNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYES 170 (556)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (556)
++++++..+.+++.++++.++++++++++............... ...++.+....... .......+++
T Consensus 82 ~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~---------~~~~~~~~~~ 149 (513)
T PRK07656 82 VVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLPA---LEHVVICETEEDDP---------HTEKMKTFTD 149 (513)
T ss_pred EEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccCC---ccEEEEEcCccccc---------CccccccHHH
Confidence 99999999999999999999999999998876665554332221 23333333322110 0001133444
Q ss_pred ccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchh-hhH
Q 045072 171 LVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSY-PWG 249 (556)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~-~~~ 249 (556)
++...... ....+..++++++++|||||||.||+|.++|.++..........+++.+++++++.+|++|.+++.. ++.
T Consensus 150 ~~~~~~~~-~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (513)
T PRK07656 150 FLAAGDPA-ERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYKAGVNA 228 (513)
T ss_pred HHhcCCCC-CCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHHHHHHHH
Confidence 44433221 1122356789999999999999999999999999888877777788999999999999999999765 677
Q ss_pred hHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHHHHhH-hcCC-
Q 045072 250 MAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVLFRTE-SLGF- 325 (556)
Q Consensus 250 ~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~~~~~-~~~~- 325 (556)
++..|+++++.+..++..+++.++++++|++.++|.++..+.+... ...++++|.+++||+++++++.+.+. .++.
T Consensus 229 ~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~ 308 (513)
T PRK07656 229 PLMRGATILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLSSLRLAVTGAASMPVALLERFESELGVD 308 (513)
T ss_pred HHHcCceEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCccceeeEEecCCCCCHHHHHHHHHHcCCC
Confidence 8888999888888899999999999999999999999999988765 33678999999999999999999887 6688
Q ss_pred eEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCcccc
Q 045072 326 LVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLG 405 (556)
Q Consensus 326 ~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~g 405 (556)
.+++.||+||+++++..+..... ......++|.+.++. +++|+|+ ++.+++.+ +.|||+++|+.++.|
T Consensus 309 ~~~~~YG~tE~~~~~~~~~~~~~--------~~~~~~~vG~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~g 376 (513)
T PRK07656 309 IVLTGYGLSEASGVTTFNRLDDD--------RKTVAGTIGTAIAGV-ENKIVNE-LGEEVPVG--EVGELLVRGPNVMKG 376 (513)
T ss_pred ceEeEEccccCCCceeecCcccc--------ccccCCCccccCCCc-EEEEECC-CCCCCCCC--CceEEEEEcchhhhh
Confidence 89999999999887765432211 011135799999998 9999997 68888887 679999999999999
Q ss_pred ccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCee
Q 045072 406 YLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGET 485 (556)
Q Consensus 406 y~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~ 485 (556)
|++++..+...+.+++||+|||+|+++++|.+++.||.+|+++.+|.++++.+||+.|.++++|.+++|++.+++..|+.
T Consensus 377 y~~~~~~~~~~~~~~~~~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~ 456 (513)
T PRK07656 377 YYDDPEATAAAIDADGWLHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAEVEEVLYEHPAVAEAAVIGVPDERLGEV 456 (513)
T ss_pred hcCCHHHHhhhhccCCceeccceEEEcCCeeEEEEecccceEEeCCEEeCHHHHHHHHHhCCCeeEEEEEecCCcccCce
Confidence 99999988888877899999999999999999999999999999999999999999999999999999999998888888
Q ss_pred eEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHH
Q 045072 486 PCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELRE 543 (556)
Q Consensus 486 ~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~ 543 (556)
++++|+..+... .+.+++.++++++++++++|..++++++||+|++||++|++|++
T Consensus 457 ~~~~v~~~~~~~--~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gK~~r~~l~~ 512 (513)
T PRK07656 457 GKAYVVLKPGAE--LTEEELIAYCREHLAKYKVPRSIEFLDELPKNATGKVLKRALRE 512 (513)
T ss_pred EEEEEEECCCCC--CCHHHHHHHHHhhcccccCCCEEEEecCCCCCCccceeHHHHhc
Confidence 889988765433 67789999999999999999999999999999999999999975
No 30
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.7e-67 Score=554.93 Aligned_cols=520 Identities=27% Similarity=0.375 Sum_probs=425.6
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccc
Q 045072 10 NSSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGA 89 (556)
Q Consensus 10 ~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (556)
+....|+.++++++++++|+++|+.+.++.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 28 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~ 107 (573)
T PRK05605 28 DYGDTTLVDLYDNAVARFGDRPALDFFGATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRLGA 107 (573)
T ss_pred CCCcCCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCc
Confidence 33457899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCC-C----CCCc-------
Q 045072 90 ILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDN-D----NKSS------- 157 (556)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~------- 157 (556)
+++|++|.++.+++.+++++++++++|+++.....+........ ...++.+........ . ....
T Consensus 108 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (573)
T PRK05605 108 VVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTTP----LETIVSVNMIAAMPLLQRLALRLPIPALRKAR 183 (573)
T ss_pred EEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhccc----cceeEeeecccccccccccccccccccccccc
Confidence 99999999999999999999999999998876655544332211 222332221100000 0 0000
Q ss_pred --cccCCCcccccccccccCCCC---CCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcC--CCCCC
Q 045072 158 --QTVDSNFCCTYESLVTKGDPN---FKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWS--IPKQP 230 (556)
Q Consensus 158 --~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~--~~~~~ 230 (556)
..........++++....... .........+++++++|||||||.||+|.++|+++..+.......+. ....+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~ 263 (573)
T PRK05605 184 AALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGDGPE 263 (573)
T ss_pred cccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCCCCc
Confidence 000011223344433322111 01112245789999999999999999999999999876654433322 23478
Q ss_pred EEEEecChhhhhhchh-hhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEE
Q 045072 231 VYLWTLPMFHANGWSY-PWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILT 307 (556)
Q Consensus 231 ~~~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~ 307 (556)
++++.+|++|.+|+.. .+.++..|+++++.+..++..+++.++++++|.+.++|.+++.+.+... ...++++|.+++
T Consensus 264 ~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~ 343 (573)
T PRK05605 264 RVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRNAFS 343 (573)
T ss_pred EEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccEEEE
Confidence 9999999999998765 5567788999988888899999999999999999999999999987654 446789999999
Q ss_pred eCCCCcHHHHHHhH-hcCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCC-Ccee
Q 045072 308 AGAPPPAAVLFRTE-SLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSES-GLSV 385 (556)
Q Consensus 308 ~g~~~~~~~~~~~~-~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~-~~~~ 385 (556)
||++++++..+.+. .++..+++.||+||++++++..... .....+++|.+.++. .++|+|+++ +.++
T Consensus 344 gg~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~----------~~~~~~~~G~~~~~~-~~~i~d~~~~~~~~ 412 (573)
T PRK05605 344 GAMALPVSTVELWEKLTGGLLVEGYGLTETSPIIVGNPMS----------DDRRPGYVGVPFPDT-EVRIVDPEDPDETM 412 (573)
T ss_pred CCCcCCHHHHHHHHHHhCCCeecccccchhchhhhcCCcc----------cCCcCCccccCCCCC-EEEEEcCCCCCccC
Confidence 99999999999887 4588999999999998776553211 112235789999998 999999866 6778
Q ss_pred cCCCCeeeEEEEecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhc
Q 045072 386 SHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYT 465 (556)
Q Consensus 386 ~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~ 465 (556)
+.+ +.|||+++|+.++.||+++++.+...|. +|||+|||+|+++++|++++.||.+|+++.+|++|+|.+||+++.+
T Consensus 413 ~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~eIE~~l~~ 489 (573)
T PRK05605 413 PDG--EEGELLVRGPQVFKGYWNRPEETAKSFL-DGWFRTGDVVVMEEDGFIRIVDRIKELIITGGFNVYPAEVEEVLRE 489 (573)
T ss_pred CCC--CeeEEEEecCchhhhhcCChhHhhhccc-CCCcccCCEEEEcCCCcEEEEeccccceeeCCEEECHHHHHHHHHh
Confidence 777 6899999999999999999999888887 6799999999999999999999999999999999999999999999
Q ss_pred CCCccccEEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHH
Q 045072 466 NPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMA 545 (556)
Q Consensus 466 ~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~ 545 (556)
++.|.+++|++.+++..++.+++++++.++.. .+.+++.++++++++.+++|..++++++||+|.+||++|++|++++
T Consensus 490 ~~~i~~~~v~~~~~~~~~~~~~~~vv~~~~~~--~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~L~~~~ 567 (573)
T PRK05605 490 HPGVEDAAVVGLPREDGSEEVVAAVVLEPGAA--LDPEGLRAYCREHLTRYKVPRRFYHVDELPRDQLGKVRRREVREEL 567 (573)
T ss_pred CcccceEEEEeeecccCCeEEEEEEEECCCCC--CCHHHHHHHHHHhCccccCCcEEEEeccCCCCCcccccHHHHHHHH
Confidence 99999999999998888889999998877643 5778999999999999999999999999999999999999999998
Q ss_pred HHhc
Q 045072 546 KAMG 549 (556)
Q Consensus 546 ~~~~ 549 (556)
.+..
T Consensus 568 ~~~~ 571 (573)
T PRK05605 568 LEKL 571 (573)
T ss_pred HHHh
Confidence 7654
No 31
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.1e-68 Score=562.60 Aligned_cols=515 Identities=23% Similarity=0.278 Sum_probs=409.8
Q ss_pred HHHHHHHHHHhcCCCCEEEEC------CccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccc
Q 045072 16 PLGFLERAATVYGDCPSIIYN------NLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGA 89 (556)
Q Consensus 16 ~~~~l~~~~~~~p~~~a~~~~------~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (556)
..++|+++++.+|+++|+++. .+.+||+||.++++++|++|++.|+++||+|+++++|+++++++++||+++|+
T Consensus 55 ~~~~l~~~~~~~p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Ga 134 (629)
T PRK10524 55 CHNAVDRHLAKRPEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACARIGA 134 (629)
T ss_pred HHHHHHHhhccCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCc
Confidence 357788888889999999973 26899999999999999999999999999999999999999999999999999
Q ss_pred eEeccCCCCCHHHHHHHHhccCCeEEEEeccc---------hhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCcccc
Q 045072 90 ILNNINTRLDARTISVLLQHSESKLVLVDYQS---------RNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTV 160 (556)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (556)
++++++|.++.+++.+++++++++++|+++.. .+.+.++...... ....++.+....... ..
T Consensus 135 v~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~vi~~~~~~~~~-------~~ 205 (629)
T PRK10524 135 IHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQH--KPRHVLLVDRGLAPM-------AR 205 (629)
T ss_pred EEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCC--CCCEEEEEeCCCCCc-------Cc
Confidence 99999999999999999999999999997642 2333333332211 123455544321100 00
Q ss_pred CCCcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhh-hhhhcCCCCCCEEEEecChh
Q 045072 161 DSNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVD-SLIDWSIPKQPVYLWTLPMF 239 (556)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~pl~ 239 (556)
.......+.++...............++++++++|||||||.||||.++|.+++..... ....+++.++|++++..|+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 285 (629)
T PRK10524 206 VAGRDVDYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCASDIG 285 (629)
T ss_pred ccCCcccHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcCCCC
Confidence 00011233333332211111112245679999999999999999999999987544333 33446788999999999999
Q ss_pred hhhhchh-hhHhHhcCcEeEEec----CCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC----CCCCCCCeEEEEeCC
Q 045072 240 HANGWSY-PWGMAAVGGTNVCLR----KFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR----SEPLRNPVHILTAGA 310 (556)
Q Consensus 240 ~~~g~~~-~~~~~~~g~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----~~~l~~l~~v~~~g~ 310 (556)
|..+... ++.++..|+++++.. ..++..++++++++++|+++++|++++.+.+... ...++++|.++++|+
T Consensus 286 ~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~Ge 365 (629)
T PRK10524 286 WVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFLAGE 365 (629)
T ss_pred eeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEEEeCC
Confidence 9888654 677888899988875 3578999999999999999999999999876532 345789999999999
Q ss_pred CCcHHHHHHhH-hcCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCC
Q 045072 311 PPPAAVLFRTE-SLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDG 389 (556)
Q Consensus 311 ~~~~~~~~~~~-~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~ 389 (556)
++++++.+++. .+++++++.||+||++..+....... .......+++|.|.+++ +++|+|+++|.+++.+
T Consensus 366 ~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~-------~~~~~~~~~~G~p~~g~-~~~i~d~~~g~~~~~g- 436 (629)
T PRK10524 366 PLDEPTASWISEALGVPVIDNYWQTETGWPILAIARGV-------EDRPTRLGSPGVPMYGY-NVKLLNEVTGEPCGPN- 436 (629)
T ss_pred CCCHHHHHHHHHhcCCCeEeccccccccchhhcCCCCc-------ccCcCCCCCcccCcCCc-eEEEEeCCCCCCCCCC-
Confidence 99999998887 56899999999999985433221100 00112246889999999 9999998788898887
Q ss_pred CeeeEEEEecC---CccccccCCCCccccCc---CCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHH
Q 045072 390 ASLGEIVFRGG---SMMLGYLKDPNGTRKCM---KDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVL 463 (556)
Q Consensus 390 ~~~Gel~i~~~---~~~~gy~~~~~~~~~~~---~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l 463 (556)
+.|||+++|| +.+.|||++++.+...+ ..++||+|||+|++++||++++.||.||+|+++|.+|+|.+||++|
T Consensus 437 -~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l 515 (629)
T PRK10524 437 -EKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLGTREIEESI 515 (629)
T ss_pred -CcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCHHHHHHHH
Confidence 6899999998 57889999987654432 1368999999999999999999999999999999999999999999
Q ss_pred hcCCCccccEEEeecCCCCCeeeEEEEEecccccC------CCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCcc
Q 045072 464 YTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEK------KPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIK 537 (556)
Q Consensus 464 ~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~------~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~ 537 (556)
.++|+|.+++|++.+++..|+.++++|+..++... ....++|.+++++++++++.|..++++++||+|++||++
T Consensus 516 ~~~p~V~e~~vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~ 595 (629)
T PRK10524 516 SSHPAVAEVAVVGVKDALKGQVAVAFVVPKDSDSLADREARLALEKEIMALVDSQLGAVARPARVWFVSALPKTRSGKLL 595 (629)
T ss_pred HhCCCcceEEEEccccCCCCeEEEEEEEECCCCccccccchHHHHHHHHHHHHhhcCCCcCCCEEEEcCCCCCCCCcchH
Confidence 99999999999999999889999999998765321 013568899999999999999999999999999999999
Q ss_pred HHHHHHHHHHhc
Q 045072 538 KFELREMAKAMG 549 (556)
Q Consensus 538 r~~l~~~~~~~~ 549 (556)
|+.|++.+.+..
T Consensus 596 R~~L~~~~~~~~ 607 (629)
T PRK10524 596 RRAIQAIAEGRD 607 (629)
T ss_pred HHHHHHHHcCCC
Confidence 999999876544
No 32
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.2e-67 Score=549.25 Aligned_cols=528 Identities=52% Similarity=0.938 Sum_probs=431.5
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 045072 11 SSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAI 90 (556)
Q Consensus 11 ~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (556)
..++++.++|++.++.+|+++|+.+.+..+||+||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~ 94 (545)
T PRK08162 15 YVPLTPLSFLERAAEVYPDRPAVIHGDRRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGVPMAGAV 94 (545)
T ss_pred cccCCHHHHHHHHHHHCCCCeEEEECCeEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcE
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCccccccc
Q 045072 91 LNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYES 170 (556)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (556)
++|++|.++.+++.++++.++++.++++.+..+.+.+.....+. ...+.+....... ..........+++
T Consensus 95 ~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~------~~~~~~~~~~~~~ 164 (545)
T PRK08162 95 LNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLPG----PKPLVIDVDDPEY------PGGRFIGALDYEA 164 (545)
T ss_pred EeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCCC----CceEEEecCcccc------ccCCCcccccHHH
Confidence 99999999999999999999999999999887776665443321 1122232211100 0000011223445
Q ss_pred ccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchhhhHh
Q 045072 171 LVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSYPWGM 250 (556)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~ 250 (556)
++....+......+.+.+++++++|||||||.||+|+++|.++..+.......+.+..++++++.+|++|..++...+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~~~~~~~~~ 244 (545)
T PRK08162 165 FLASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPKHPVYLWTLPMFHCNGWCFPWTV 244 (545)
T ss_pred HhccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeeEeccCcHhhhhHHHHHHH
Confidence 54443333332223445689999999999999999999999887666555555677888999999999999998776666
Q ss_pred HhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHHHHhHhcCCeEE
Q 045072 251 AAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVLFRTESLGFLVS 328 (556)
Q Consensus 251 ~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~~~~~~~~~~l~ 328 (556)
.+.+++.++...+++..+++.++++++|++.++|++++.+.+... ...+.+.+.++++|+++++...+.+.+++++++
T Consensus 245 ~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 324 (545)
T PRK08162 245 AARAGTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGIDHPVHAMVAGAAPPAAVIAKMEEIGFDLT 324 (545)
T ss_pred HHHccEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCccceEEEECCCCCCHHHHHHHHHhCCcee
Confidence 677888888888999999999999999999999999999987654 234556778889999999999998887799999
Q ss_pred ecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccC
Q 045072 329 HGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLK 408 (556)
Q Consensus 329 ~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~ 408 (556)
+.||+||+++.+..+.....+..++.........+.|.+.+....++|+|++++.+++.++.+.|||+++|+.++.||++
T Consensus 325 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~gY~~ 404 (545)
T PRK08162 325 HVYGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMKGYLK 404 (545)
T ss_pred ecccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcchhhhcC
Confidence 99999999766655433333332322222223345676665544688999778888877543579999999999999999
Q ss_pred CCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEE
Q 045072 409 DPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCA 488 (556)
Q Consensus 409 ~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~ 488 (556)
+++.+...|. ++||+|||+|++|+||.+++.||.+|+++.+|++|+|.+||..|.++|+|.+++|++.+++..|+.+++
T Consensus 405 ~~~~~~~~~~-~g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~~ 483 (545)
T PRK08162 405 NPKATEEAFA-GGWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIEVEDVLYRHPAVLVAAVVAKPDPKWGEVPCA 483 (545)
T ss_pred ChhhhHHHhh-CCCcccCceEEEcCCccEEEEecccceEEeCCEEECHHHHHHHHHhCCcccEEEEEeeeccccCceEEE
Confidence 9999988887 899999999999999999999999999999999999999999999999999999999998877888999
Q ss_pred EEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHhcccc
Q 045072 489 FLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMGKSK 552 (556)
Q Consensus 489 ~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~~~~~ 552 (556)
+++..++.. .+.+++.+++++.++++++|..+.+ .+||+|++||++|+.|++.+.++...+
T Consensus 484 ~v~~~~~~~--~~~~~l~~~~~~~l~~~~~P~~~~~-~~iP~t~~gK~~r~~l~~~~~~l~~~~ 544 (545)
T PRK08162 484 FVELKDGAS--ATEEEIIAHCREHLAGFKVPKAVVF-GELPKTSTGKIQKFVLREQAKSLKAID 544 (545)
T ss_pred EEEeCCCCC--CCHHHHHHHHHHhcccccCCcEEEe-cccCCCCCcCCcHHHHHHHHhhhhhhc
Confidence 988876544 5788999999999999999998875 679999999999999999988877654
No 33
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=2.4e-67 Score=552.08 Aligned_cols=548 Identities=51% Similarity=0.907 Sum_probs=431.1
Q ss_pred CccCCCCCCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHH
Q 045072 4 LKPCTANSSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFA 83 (556)
Q Consensus 4 ~~~~~~~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA 83 (556)
+-.........++...+...+..+|+++|+++.++.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la 89 (567)
T PLN02479 10 LPKNAANYTALTPLWFLERAAVVHPTRKSVVHGSVRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFG 89 (567)
T ss_pred ccCccccccccCHHHHHHHHHhhCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHH
Confidence 33344444467899999999999999999999889999999999999999999999999999999999999999999999
Q ss_pred hhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCC----CCCCCCeEEEcCCCCCCCCCCCccc
Q 045072 84 IPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPS----DIKCPPLVLIADHTDHDNDNKSSQT 159 (556)
Q Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (556)
|+++|++++|++|..+.+++.++++.++++++|+++++.+...+....+.. ....+.++.+.+.... ... ...
T Consensus 90 ~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~ 166 (567)
T PLN02479 90 VPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCD-PKS--LQY 166 (567)
T ss_pred HHhCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCC-ccc--ccc
Confidence 999999999999999999999999999999999998876655544332211 0111233333321100 000 000
Q ss_pred cCCCcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChh
Q 045072 160 VDSNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMF 239 (556)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~ 239 (556)
........+.+++....+......+...+++++++|||||||.||+|.++|+++..........+++..++++++.+|++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 246 (567)
T PLN02479 167 ALGKGAIEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNEGAVYLWTLPMF 246 (567)
T ss_pred ccccCcccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCCEEEEecchh
Confidence 00011223444444332222111223345778899999999999999999999876655555566788899999999999
Q ss_pred hhhhchhhhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCCC---CCCCCCeEEEEeCCCCcHHH
Q 045072 240 HANGWSYPWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPRS---EPLRNPVHILTAGAPPPAAV 316 (556)
Q Consensus 240 ~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~---~~l~~l~~v~~~g~~~~~~~ 316 (556)
|.+++...+.....++..+++..+++..+++.++++++|+++++|.++..+.+.... ..+++++.++++|+++++.+
T Consensus 247 h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~~~~~ 326 (567)
T PLN02479 247 HCNGWCFTWTLAALCGTNICLRQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAPPPSV 326 (567)
T ss_pred hhhhHHHHHHHHhhcCceEeccCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCCCHHH
Confidence 999987665555556666667788999999999999999999999999999876431 25678999999999999999
Q ss_pred HHHhHhcCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEE
Q 045072 317 LFRTESLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIV 396 (556)
Q Consensus 317 ~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~ 396 (556)
.+++.+.+.++++.||+||+++.+..+.....|...+...........|.+.++...++|+|++++.+++.++.+.|||+
T Consensus 327 ~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~ 406 (567)
T PLN02479 327 LFAMSEKGFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIV 406 (567)
T ss_pred HHHHHhcCCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEE
Confidence 99888778999999999999665443322222222211111122345677777774488999767888876544579999
Q ss_pred EecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEe
Q 045072 397 FRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVA 476 (556)
Q Consensus 397 i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~ 476 (556)
++|++++.|||++++.+...|. ++||+|||+|+++++|++++.||.+|+|+.+|++|++.+||..|.++|.|.+++|++
T Consensus 407 v~g~~~~~GY~~~~~~t~~~~~-~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~ 485 (567)
T PLN02479 407 MRGNMVMKGYLKNPKANEEAFA-NGWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEVENVVYTHPAVLEASVVA 485 (567)
T ss_pred EeccchhhhhhcCcccccchhc-CCceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHHHHHHHhCcccceeeEEe
Confidence 9999999999999999999887 899999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCeeeEEEEEecccccC---CCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHhccccc
Q 045072 477 RPDEFWGETPCAFLSLKAELEK---KPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMGKSKV 553 (556)
Q Consensus 477 ~~~~~~g~~~~~~v~~~~~~~~---~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~~~~~~ 553 (556)
.+++..|+.+++++++..+... ....+++.+++++++++|+.|..+.+ ++||+|++||++|+.|++.+........
T Consensus 486 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~-~~iP~t~~gKv~r~~L~~~~~~~~~~~~ 564 (567)
T PLN02479 486 RPDERWGESPCAFVTLKPGVDKSDEAALAEDIMKFCRERLPAYWVPKSVVF-GPLPKTATGKIQKHVLRAKAKEMGPVKK 564 (567)
T ss_pred ccchhcCceeEEEEEecCcccccchhhhHHHHHHHHHhhcccccCCceEEe-ccCCCCCccCeeHHHHHHHHHhhCCccc
Confidence 9988878889999988765321 23467899999999999999998776 6799999999999999999888776666
Q ss_pred cCC
Q 045072 554 SRM 556 (556)
Q Consensus 554 ~~~ 556 (556)
+++
T Consensus 565 ~~~ 567 (567)
T PLN02479 565 SRL 567 (567)
T ss_pred ccC
Confidence 654
No 34
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.2e-68 Score=553.25 Aligned_cols=514 Identities=22% Similarity=0.248 Sum_probs=406.5
Q ss_pred CCCCCCCCCHHHHHHHHHHhcCCCCEEEECC--ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHh
Q 045072 7 CTANSSPLTPLGFLERAATVYGDCPSIIYNN--LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAI 84 (556)
Q Consensus 7 ~~~~~~~~t~~~~l~~~~~~~p~~~a~~~~~--~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~ 84 (556)
-+++..+.++.+.|.+.++.+|+++|+++.+ +.+||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||
T Consensus 7 ~~~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~ 86 (540)
T PRK05857 7 QAMPQLPSTVLDRVFEQARQQPEAIALRRCDGTSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLAC 86 (540)
T ss_pred cccccCCcchHHHHHHHHhhCCCcEEEeecCCCceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHH
Confidence 3567788899999999999999999998643 67999999999999999999999999999999999999999999999
Q ss_pred hhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCc
Q 045072 85 PFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNF 164 (556)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (556)
+++|++++|+++.++.+++.++++.++++.+|+++.............. ....+..+.....
T Consensus 87 ~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-------------- 148 (540)
T PRK05857 87 AKLGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALH----SIPVIAVDIAAVT-------------- 148 (540)
T ss_pred HHcCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhcccccccccc----ccceeEeeccccc--------------
Confidence 9999999999999999999999999999999998865422111111110 1112222211100
Q ss_pred ccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhh----hhcCCCCCCEEEEecChhh
Q 045072 165 CCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSL----IDWSIPKQPVYLWTLPMFH 240 (556)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~----~~~~~~~~~~~~~~~pl~~ 240 (556)
............ ........+++++++|||||||.||||.++|+++..+..... ..+.+..+++.+..+|++|
T Consensus 149 -~~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h 225 (540)
T PRK05857 149 -RESEHSLDAASL--AGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATH 225 (540)
T ss_pred -cccccccccccc--ccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccc
Confidence 000000000000 001124567999999999999999999999999876543221 2235667889999999999
Q ss_pred hhhchhhhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHHH
Q 045072 241 ANGWSYPWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVLF 318 (556)
Q Consensus 241 ~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~~ 318 (556)
..++...+.++..|+++++ .+.++..+++.++++++|.++++|+++..+.+... ...++++|.+++||++++....+
T Consensus 226 ~~~l~~~~~~l~~G~~~v~-~~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~ 304 (540)
T PRK05857 226 IGGLWWILTCLMHGGLCVT-GGENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVPSLRLVGYGGSRAIAADVR 304 (540)
T ss_pred cchHHHHHHHhhcceeEEe-cCCChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCccceEEEEcCccCCchhHH
Confidence 9998888888899998764 55688999999999999999999999999987654 34678999999999999888776
Q ss_pred HhHhcCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCC---CCeeeEE
Q 045072 319 RTESLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHD---GASLGEI 395 (556)
Q Consensus 319 ~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~---~~~~Gel 395 (556)
++..+++++++.||+||++........... .......+++|.+.+++ +++|+|++...+++.+ .++.|||
T Consensus 305 ~~~~~g~~i~~~YG~TE~~~~~~~~~~~~~------~~~~~~~~~~G~~~~g~-~v~i~d~~~~~~~~~~~~~~~~~Gel 377 (540)
T PRK05857 305 FIEATGVRTAQVYGLSETGCTALCLPTDDG------SIVKIEAGAVGRPYPGV-DVYLAATDGIGPTAPGAGPSASFGTL 377 (540)
T ss_pred HHHHhCCeeecccCCCcCCceeeecccccc------cccccccCCcCcccCCc-EEEEECccccCccccccCCCCCcceE
Confidence 666779999999999999754433221110 00111246899999999 9999997443333321 1267999
Q ss_pred EEecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEE
Q 045072 396 VFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVV 475 (556)
Q Consensus 396 ~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~ 475 (556)
+++|++++.||+++++.+...|. +|||+|||+|++|++|++++.||.+|+|+.+|.+|+|.+||.+|..+|+|.+++|+
T Consensus 378 ~v~g~~~~~GY~~~~~~t~~~~~-~g~~~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~V~~~~v~ 456 (540)
T PRK05857 378 WIKSPANMLGYWNNPERTAEVLI-DGWVNTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIAEGVSGVREAACY 456 (540)
T ss_pred EEeCcchhhhhhCCccchhhhcC-CCceeccceEEEcCCceEEEeccccccEecCCEEECHHHHHHHHHhCCCeeEEEEE
Confidence 99999999999999999888887 89999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCeeeEEEEEecccccCCCCH----HHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHhccc
Q 045072 476 ARPDEFWGETPCAFLSLKAELEKKPTE----KEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMGKS 551 (556)
Q Consensus 476 ~~~~~~~g~~~~~~v~~~~~~~~~~~~----~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~~~~ 551 (556)
+.+++..++.+.++++..+.... ... +.+.+.+++.++++++|..++++++||+|++||++|++|++.+.+.+.+
T Consensus 457 ~~~~~~~~~~~~~~vv~~~~~~~-~~~~~l~~~~~~~~~~~l~~~~~P~~v~~~~~iP~t~~GKi~r~~l~~~~~~~~~~ 535 (540)
T PRK05857 457 EIPDEEFGALVGLAVVASAELDE-SAARALKHTIAARFRRESEPMARPSTIVIVTDIPRTQSGKVMRASLAAAATADKAR 535 (540)
T ss_pred ecCccccccceEEEEEeCCCCCh-hhHHHHHHHHHHHHHhhhccccCCeEEEEhhcCCCCCCcceeHHHHHHhhhhccce
Confidence 99988778778777776544221 112 3344556677899999999999999999999999999999999876544
No 35
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=2e-67 Score=558.52 Aligned_cols=507 Identities=19% Similarity=0.236 Sum_probs=396.8
Q ss_pred HHHHHHHhcCCCCEEEECC-----ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEec
Q 045072 19 FLERAATVYGDCPSIIYNN-----LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNN 93 (556)
Q Consensus 19 ~l~~~~~~~p~~~a~~~~~-----~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 93 (556)
+.....+++++++|+++.+ +++||+||.+++.++|.+|++.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 89 ~~~~~~~~~~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~lA~~~~Gav~vp 168 (652)
T TIGR01217 89 YAENLLRAAGTEPALLYVDETHEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAMLATASVGAIWSS 168 (652)
T ss_pred HHHHHhccCCCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCeEEEe
Confidence 3344444568999998854 47999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHhccCCeEEEEeccc---------hhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCc
Q 045072 94 INTRLDARTISVLLQHSESKLVLVDYQS---------RNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNF 164 (556)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (556)
+++.++.+++.+++++++++++|+++.. .+.+.++...++. ...++.+........ ... ....
T Consensus 169 ~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~---~~~--~~~~ 240 (652)
T TIGR01217 169 CSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPT---LRAVVHIPYLGPRET---EAP--KIDG 240 (652)
T ss_pred cCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCC---ccEEEEEeCCCCccc---ccc--cccC
Confidence 9999999999999999999999997753 3344444433321 234444432111000 000 0011
Q ss_pred ccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHH-HhhhhhhcCCCCCCEEEEecChhhhhh
Q 045072 165 CCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVM-TVDSLIDWSIPKQPVYLWTLPMFHANG 243 (556)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~pl~~~~g 243 (556)
...+++++...........+...+++++|+|||||||.||||+++|++++.. .......+++.++|++++..|+.|+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 320 (652)
T TIGR01217 241 ALDLEDFTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLGPGDRLFYYTTTGWMMW 320 (652)
T ss_pred cccHHHHHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCCCCcEEEEeCCcchhhh
Confidence 2334554433211111112345689999999999999999999999986543 333444567899999999999988753
Q ss_pred chhhhHhHhcCcEeEEecC----CCHHHHHHHHHHhCCcEEechhHHHHHHHcCC----CCCCCCCCeEEEEeCCCCcHH
Q 045072 244 WSYPWGMAAVGGTNVCLRK----FDAAVIYKMIRQHGVTHMCGAPVVLNMISNLP----RSEPLRNPVHILTAGAPPPAA 315 (556)
Q Consensus 244 ~~~~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~----~~~~l~~l~~v~~~g~~~~~~ 315 (556)
..++.++..|+++++... .++..++++++++++|++.+.|.+++.+.... ....++++|.+++||++++++
T Consensus 321 -~~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~~~ 399 (652)
T TIGR01217 321 -NWLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQCVASTGSPLPPD 399 (652)
T ss_pred -HHHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeEEEeecCCCCHH
Confidence 345678899999998752 37889999999999999988888888776532 135678999999999999999
Q ss_pred HHHHhH-hcC--CeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCee
Q 045072 316 VLFRTE-SLG--FLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASL 392 (556)
Q Consensus 316 ~~~~~~-~~~--~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~ 392 (556)
..+++. .++ +.+.+.||+||+++...... .......+++|.|.+++ +++|+|+ +|.++ .| +.
T Consensus 400 ~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~----------~~~~~~~g~~g~p~~g~-~v~ivd~-~g~~~-~g--~~ 464 (652)
T TIGR01217 400 GFRWVYDEIKADVWLASISGGTDICSCFAGAN----------PTLPVHIGEIQAPGLGT-AVQSWDP-EGKPV-TG--EV 464 (652)
T ss_pred HHHHHHHHhCCCceEEeccCHHHHhccccCCC----------CCCCCcCCccCCCcCCC-ceEEECC-CCCCC-CC--Cc
Confidence 998887 443 56789999999754332211 00011235788999999 9999997 68777 35 68
Q ss_pred eEEEEecC--CccccccCCCCcccc--C-cC-CCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcC
Q 045072 393 GEIVFRGG--SMMLGYLKDPNGTRK--C-MK-DDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTN 466 (556)
Q Consensus 393 Gel~i~~~--~~~~gy~~~~~~~~~--~-~~-~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~ 466 (556)
|||+++|| +++.|||++++.+.. . |. .+|||+|||+|++|+||++++.||.||+|+.+|++|+|.|||++|.+|
T Consensus 465 GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~ 544 (652)
T TIGR01217 465 GELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMGSAEIYNAVERL 544 (652)
T ss_pred cEEEEecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcCHHHHHHHHHhC
Confidence 99999996 688999999986541 1 21 268999999999999999999999999999999999999999999999
Q ss_pred CCccccEEEeecCCCCCeeeEEEEEecccccC-CCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHH
Q 045072 467 PAVNEAAVVARPDEFWGETPCAFLSLKAELEK-KPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMA 545 (556)
Q Consensus 467 ~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~-~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~ 545 (556)
|.|.+++|++.+++..|+.++++|++.++... +...++|.++++++++++++|..++++++||+|++||++|+.|++.+
T Consensus 545 p~V~eaavvg~~~~~~ge~~~afVv~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~r~~Lr~~~ 624 (652)
T TIGR01217 545 DEVRESLCIGQEQPDGGYRVVLFVHLAPGATLDDALLDRIKRTIRAGLSPRHVPDEIIEVPGIPHTLTGKRVEVAVKRVL 624 (652)
T ss_pred CCcceEEEEeeecCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCccChHHHHHHHH
Confidence 99999999999999999999999998876431 11246899999999999999999999999999999999999999997
Q ss_pred HHhc
Q 045072 546 KAMG 549 (556)
Q Consensus 546 ~~~~ 549 (556)
....
T Consensus 625 ~~~~ 628 (652)
T TIGR01217 625 QGTP 628 (652)
T ss_pred cCCC
Confidence 6543
No 36
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.4e-67 Score=543.35 Aligned_cols=482 Identities=20% Similarity=0.322 Sum_probs=410.2
Q ss_pred CCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEec
Q 045072 14 LTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNN 93 (556)
Q Consensus 14 ~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 93 (556)
|++.+.|+++++++|+++|+.+.+.++||.||.++++++|.+|.+.|. +|++|+|+++|++++++++|||+++|++++|
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 79 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKENDRVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGAAMAGWTCVP 79 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEecCCcEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHHHHcCeEEEe
Confidence 578899999999999999999999999999999999999999999884 8999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccccccc
Q 045072 94 INTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESLVT 173 (556)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (556)
+++.++.+++.++++.+++++++++......+... ...++.... +.+.+.
T Consensus 80 l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~---------~~~~~~~~~---------------------~~~~~~ 129 (487)
T PRK07638 80 LDIKWKQDELKERLAISNADMIVTERYKLNDLPDE---------EGRVIEIDE---------------------WKRMIE 129 (487)
T ss_pred cCccCCHHHHHHHHHhCCCCEEEEecccccchhhc---------cceEEEehh---------------------hhhhhh
Confidence 99999999999999999999999988654433211 111221111 111111
Q ss_pred cCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchhhhHhHhc
Q 045072 174 KGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAV 253 (556)
Q Consensus 174 ~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~ 253 (556)
....... ......+++++++|||||||.||+|.++|+++..+.......+++.++|+++...|++|..++...+.++..
T Consensus 130 ~~~~~~~-~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~ 208 (487)
T PRK07638 130 KYLPTYA-PIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFLYGAISTLYV 208 (487)
T ss_pred hcccccc-ccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHHHHHHHHHcc
Confidence 1111110 111234678999999999999999999999998887777777888999999999999998887778888999
Q ss_pred CcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCCCCCCCCCeEEEEeCCCCcHHHHHHhHh-c-CCeEEecc
Q 045072 254 GGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPRSEPLRNPVHILTAGAPPPAAVLFRTES-L-GFLVSHGY 331 (556)
Q Consensus 254 g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~l~~v~~~g~~~~~~~~~~~~~-~-~~~l~~~y 331 (556)
|+++++...+++..+++.++++++|+++++|+++..+.+.. ....+.+.++++|++++.....++.+ + ++.+++.|
T Consensus 209 g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~--~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~Y 286 (487)
T PRK07638 209 GQTVHLMRKFIPNQVLDKLETENISVMYTVPTMLESLYKEN--RVIENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFY 286 (487)
T ss_pred CcEEEEcCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCc--CcCCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEe
Confidence 99999988899999999999999999999999999998763 23456677889999999999988884 4 78999999
Q ss_pred cccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccCCCC
Q 045072 332 GLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPN 411 (556)
Q Consensus 332 G~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~ 411 (556)
|+||++.++..... .......++|.|+++. .++|+|+ +|.+++.+ +.|||+++|+.++.||++++.
T Consensus 287 G~tE~~~~~~~~~~----------~~~~~~~~~G~~~~~~-~~~i~d~-~g~~~~~g--~~Gel~v~~~~~~~gy~~~~~ 352 (487)
T PRK07638 287 GASELSFVTALVDE----------ESERRPNSVGRPFHNV-QVRICNE-AGEEVQKG--EIGTVYVKSPQFFMGYIIGGV 352 (487)
T ss_pred cCCccCceEEeccc----------ccCCCCCCCCcccCCc-EEEEECC-CCCCCCCC--CCeEEEEecccceeeecCCHH
Confidence 99999876554321 1122346889999998 9999997 78889887 689999999999999999987
Q ss_pred ccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEE
Q 045072 412 GTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLS 491 (556)
Q Consensus 412 ~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~ 491 (556)
.+...+. +|||+|||++++|++|++++.||.+|+|+.+|.+|+|.+||+++.++|+|.+++|++.+++..|+.++++++
T Consensus 353 ~~~~~~~-~g~~~TGDl~~~d~~g~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~ 431 (487)
T PRK07638 353 LARELNA-DGWMTVRDVGYEDEEGFIYIVGREKNMILFGGINIFPEEIESVLHEHPAVDEIVVIGVPDSYWGEKPVAIIK 431 (487)
T ss_pred HHhhhcc-CCcEecCccEeEcCCCeEEEEecCCCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEecCchhcCCeeEEEEE
Confidence 6655544 899999999999999999999999999999999999999999999999999999999999888888888776
Q ss_pred ecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHhcc
Q 045072 492 LKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMGK 550 (556)
Q Consensus 492 ~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~~~ 550 (556)
. ....+++.++++++++++++|..++++++||+|++||++|++|++++.+...
T Consensus 432 ~------~~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~GKv~r~~L~~~~~~~~~ 484 (487)
T PRK07638 432 G------SATKQQLKSFCLQRLSSFKIPKEWHFVDEIPYTNSGKIARMEAKSWIENQEK 484 (487)
T ss_pred C------CCCHHHHHHHHHHHhhcccCCcEEEEecccCCCCcccccHHHHHHHHhcccc
Confidence 3 1567899999999999999999999999999999999999999999876544
No 37
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.5e-67 Score=545.29 Aligned_cols=524 Identities=29% Similarity=0.469 Sum_probs=425.8
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEE--CC--ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhh
Q 045072 11 SSPLTPLGFLERAATVYGDCPSIIY--NN--LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPF 86 (556)
Q Consensus 11 ~~~~t~~~~l~~~~~~~p~~~a~~~--~~--~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 86 (556)
..|.|+.++|+++++.+|+++++.. .+ +++||+||.++++++|++|.+.|+++||+|+++++|+++++++++||++
T Consensus 7 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~~~ 86 (542)
T PRK06018 7 DWPLLCHRIIDHAARIHGNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGIMG 86 (542)
T ss_pred cCCCCHHHHHHHHHHhCCCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHh
Confidence 3467999999999999999999985 23 6799999999999999999999999999999999999999999999999
Q ss_pred ccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCccc
Q 045072 87 TGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCC 166 (556)
Q Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (556)
+|+++++++|.++.+++.++++.+++++++++.+..+.+.+.....+. ...++...+.... +....+...
T Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-------~~~~~~~~~ 156 (542)
T PRK06018 87 IGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLPS---VERYVVLTDAAHM-------PQTTLKNAV 156 (542)
T ss_pred cCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCCC---ccEEEEecccccc-------cccCccccc
Confidence 999999999999999999999999999999998887776665443331 2333333322100 000111122
Q ss_pred ccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHH-HH-HhhhhhhcCCCCCCEEEEecChhhhhhc
Q 045072 167 TYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIF-VM-TVDSLIDWSIPKQPVYLWTLPMFHANGW 244 (556)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~-~~-~~~~~~~~~~~~~~~~~~~~pl~~~~g~ 244 (556)
.+.+++........ ......+++++++|||||||.||+|.++|++.+ .. .......+++..+|+++...|++|.+++
T Consensus 157 ~~~~~~~~~~~~~~-~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~~~~ 235 (542)
T PRK06018 157 AYEEWIAEADGDFA-WKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHANSW 235 (542)
T ss_pred cHHHHhccCCcccC-cccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHHhhh
Confidence 34444443322211 122456789999999999999999999999743 22 2223345678899999999999999998
Q ss_pred hhhhHhHhcCcEeEEec-CCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHHHHhH
Q 045072 245 SYPWGMAAVGGTNVCLR-KFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVLFRTE 321 (556)
Q Consensus 245 ~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~~~~~ 321 (556)
...+.++..|+++++.. .+++..+++.++++++|+++++|+++..+.+... ...++++|.++++|+++++++.++++
T Consensus 236 ~~~~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~ 315 (542)
T PRK06018 236 GIAFSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLPHLKMVVCGGSAMPRSMIKAFE 315 (542)
T ss_pred HHHHhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHH
Confidence 87788888999887764 5788999999999999999999999999987654 34567999999999999999999988
Q ss_pred hcCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCC
Q 045072 322 SLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGS 401 (556)
Q Consensus 322 ~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~ 401 (556)
++++++++.||+||++.++..+...................++|.|.++. +++|+|+ ++.+++.++...|||+++|++
T Consensus 316 ~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~-~i~v~d~-~~~~~~~~~~~~Gel~i~g~~ 393 (542)
T PRK06018 316 DMGVEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGV-EMKITDD-AGKELPWDGKTFGRLKVRGPA 393 (542)
T ss_pred HhCCCeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCc-EEEEECC-CCCCCCCCCCceeEEEEecCC
Confidence 88999999999999987765543222222222221112235789999998 9999997 788887654457999999999
Q ss_pred ccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCC
Q 045072 402 MMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEF 481 (556)
Q Consensus 402 ~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~ 481 (556)
++.||++.. ...+..++||+|||+++++++|++++.||.+|+|+.+|.++++.+||..+.++|+|.+++|++.+++.
T Consensus 394 ~~~gy~~~~---~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~ 470 (542)
T PRK06018 394 VAAAYYRVD---GEILDDDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSIDLENLAVGHPKVAEAAVIGVYHPK 470 (542)
T ss_pred cchhhhcCc---ccEecCCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHHHHHHHHhCCcceeEEEEeccCCC
Confidence 999999842 23345589999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHhcccc
Q 045072 482 WGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMGKSK 552 (556)
Q Consensus 482 ~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~~~~~ 552 (556)
+++.+.++|++.++.. .+.+++.++++++++.+++|..+.++++||+|++||++|++|+++|.+.....
T Consensus 471 ~~~~~~~~v~~~~~~~--~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~~~~~~ 539 (542)
T PRK06018 471 WDERPLLIVQLKPGET--ATREEILKYMDGKIAKWWMPDDVAFVDAIPHTATGKILKTALREQFKDYKLPT 539 (542)
T ss_pred cCceeEEEEEeCCCCC--CCHHHHHHHHHhhCccccCCcEEEEeccCCCCCcchhhHHHHHHHHhccCCCC
Confidence 8888988888876644 67789999999999999999999999999999999999999999998865443
No 38
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.7e-67 Score=546.58 Aligned_cols=516 Identities=34% Similarity=0.543 Sum_probs=441.8
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccc
Q 045072 10 NSSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGA 89 (556)
Q Consensus 10 ~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (556)
.+.+.++.++|.++++.+|+++|+.+.++.+||+||+++++++|++|.+.|+++|++|+++++|+++++++++||+++|+
T Consensus 2 ~~~~~~l~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~G~ 81 (521)
T PRK06187 2 QDYPLTIGRILRHGARKHPDKEAVYFDGRRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKIGA 81 (521)
T ss_pred CcccCCHHHHHHHHHHHCCCceEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCe
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccc
Q 045072 90 ILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYE 169 (556)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (556)
+++++++.++.+++.++++.+++++++++.+..+.+.......+. .++++..++.... .......++.
T Consensus 82 ~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---------~~~~~~~~~~ 149 (521)
T PRK06187 82 VLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPT---VRTVIVEGDGPAA---------PLAPEVGEYE 149 (521)
T ss_pred EEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccCC---ccEEEEecCcccc---------ccccccccHH
Confidence 999999999999999999999999999999887777666554432 3345544443211 0011224444
Q ss_pred cccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchhhhH
Q 045072 170 SLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSYPWG 249 (556)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~ 249 (556)
+++........ ......+++++++|||||||.||+|.++|+++..........+++..++++++..|++|..++...+.
T Consensus 150 ~~~~~~~~~~~-~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 228 (521)
T PRK06187 150 ELLAAASDTFD-FPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHAWGLPYL 228 (521)
T ss_pred HHhhcCCccCC-CCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhhHHHHHH
Confidence 54444333222 12345678999999999999999999999999888777777888999999999999999999888777
Q ss_pred hHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHHHHhHh-cCCe
Q 045072 250 MAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVLFRTES-LGFL 326 (556)
Q Consensus 250 ~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~~~~~~-~~~~ 326 (556)
++..|+++++.+..++..+++.++++++|.++++|++++.+.+... ...+.++|.+++||++++.+..+.+.+ ++++
T Consensus 229 ~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~~~~ 308 (521)
T PRK06187 229 ALMAGAKQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGAALPPALLREFKEKFGID 308 (521)
T ss_pred HHHhCCEEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCcCCCHHHHHHHHHHhCcc
Confidence 9999999999888899999999999999999999999999988776 456789999999999999999999884 4999
Q ss_pred EEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccc
Q 045072 327 VSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGY 406 (556)
Q Consensus 327 l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy 406 (556)
+++.||+||+++++.......... .......++|.+.++. .++|+|+ ++.+++.+.++.|||+++|+.++.||
T Consensus 309 v~~~YG~tE~~~~~~~~~~~~~~~-----~~~~~~~~~G~~~~~~-~~~i~~~-~~~~~~~~~g~~Gel~v~~~~~~~~y 381 (521)
T PRK06187 309 LVQGYGMTETSPVVSVLPPEDQLP-----GQWTKRRSAGRPLPGV-EARIVDD-DGDELPPDGGEVGEIIVRGPWLMQGY 381 (521)
T ss_pred hheeeccCccCcccccCCcccccc-----cccccCCccccccCCe-EEEEECC-CCCCCCCCCCCeeEEEEECcchhhhh
Confidence 999999999987665543211100 0112346889999998 9999998 57788873237899999999999999
Q ss_pred cCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeee
Q 045072 407 LKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETP 486 (556)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~ 486 (556)
+++++.+...|. ++||+|||+++++++|.+++.||.+|+++.+|.++++.+||+++.++++|.+++|++.+++..++.+
T Consensus 382 ~~~~~~~~~~~~-~~~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~ 460 (521)
T PRK06187 382 WNRPEATAETID-GGWLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPRELEDALYGHPAVAEVAVIGVPDEKWGERP 460 (521)
T ss_pred cCCHHHHHHHhh-CCceeccceEEEcCCCCEEEeecccceEEcCCeEECHHHHHHHHHhCCCceEEEEEeccCCCcCceE
Confidence 999988888777 7799999999999999999999999999999999999999999999999999999999988888889
Q ss_pred EEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHh
Q 045072 487 CAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAM 548 (556)
Q Consensus 487 ~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 548 (556)
+++++..++.. .+.+++.++++++++++.+|..++++++||+|++||++|.+|+++|.+.
T Consensus 461 ~~~v~~~~~~~--~~~~~l~~~l~~~l~~~~~p~~i~~v~~~P~t~~gK~~r~~l~~~~~~~ 520 (521)
T PRK06187 461 VAVVVLKPGAT--LDAKELRAFLRGRLAKFKLPKRIAFVDELPRTSVGKILKRVLREQYAEG 520 (521)
T ss_pred EEEEEECCCCC--CCHHHHHHHHHHhccCCCCceEEEEccCCCCCCCCCeeHHHHHHHHhcC
Confidence 99988876654 5788999999999999999999999999999999999999999998764
No 39
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=4.5e-68 Score=563.66 Aligned_cols=520 Identities=22% Similarity=0.289 Sum_probs=400.5
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEEC-------C--ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHH
Q 045072 11 SSPLTPLGFLERAATVYGDCPSIIYN-------N--LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAH 81 (556)
Q Consensus 11 ~~~~t~~~~l~~~~~~~p~~~a~~~~-------~--~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~ 81 (556)
....|+.++|.++++++|+++|+.+. + +++||+||.++++++|.+|.+.|+++||+|+|+++|+++|++++
T Consensus 40 ~~~~t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~ 119 (660)
T PLN02861 40 ADIDSPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAM 119 (660)
T ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHH
Confidence 34468999999999999999999742 1 47999999999999999999999999999999999999999999
Q ss_pred HHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccC
Q 045072 82 FAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVD 161 (556)
Q Consensus 82 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (556)
|||+++|++++|+++.++.+++.+++++++++++|++.+....+.......+. ....++..++...... ......
T Consensus 120 lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~--~l~~ii~~~~~~~~~~---~~~~~~ 194 (660)
T PLN02861 120 EACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSS--NLKTIVSFGDVSSEQK---EEAEEL 194 (660)
T ss_pred HHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCC--CCEEEEEECCCChhhh---hhhhcC
Confidence 99999999999999999999999999999999999987665544443332211 1334444432110000 000000
Q ss_pred CCcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcC-----CCCCCEEEEec
Q 045072 162 SNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWS-----IPKQPVYLWTL 236 (556)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 236 (556)
.....++.+++....... ...+..++++++|+|||||||.||||++||++++.........++ +..+|++++.+
T Consensus 195 ~~~~~~~~~~~~~~~~~~-~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~l 273 (660)
T PLN02861 195 GVSCFSWEEFSLMGSLDC-ELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYL 273 (660)
T ss_pred CcEEEEHHHHHHhCcccC-CCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEEC
Confidence 011133444443322111 112345789999999999999999999999999877655444332 46789999999
Q ss_pred ChhhhhhchhhhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcC-----------------------
Q 045072 237 PMFHANGWSYPWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNL----------------------- 293 (556)
Q Consensus 237 pl~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~----------------------- 293 (556)
|++|.+++...+.++..|+++++. .+++..+++.+++++||+++++|.+++.+.+.
T Consensus 274 Pl~H~~~~~~~~~~l~~G~~v~~~-~~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~ 352 (660)
T PLN02861 274 PLAHVYDQVIETYCISKGASIGFW-QGDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYK 352 (660)
T ss_pred cHHHHHHHHHHHHHHHhCCEEEEe-CCCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 999999987766788889988776 46899999999999999999999999888631
Q ss_pred --------------CCC---------CCC-CCCeEEEEeCCCCcHHHHHHhHhcCC-eEEecccccccccceeecccccc
Q 045072 294 --------------PRS---------EPL-RNPVHILTAGAPPPAAVLFRTESLGF-LVSHGYGLTETAGLVVSCAWKNK 348 (556)
Q Consensus 294 --------------~~~---------~~l-~~l~~v~~~g~~~~~~~~~~~~~~~~-~l~~~yG~tE~~~~~~~~~~~~~ 348 (556)
+.. ..+ .++|.+++||++++++..+.++.++. .+++.||+||+++.++.....
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~-- 430 (660)
T PLN02861 353 LGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEEFLRVTSCSVLSQGYGLTESCGGCFTSIAN-- 430 (660)
T ss_pred HHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHcCCCeeEecchhhhhhceeecccc--
Confidence 000 011 57899999999999998665556654 799999999997665432110
Q ss_pred ccCCChhhhccccccCccccceeeeeEEecC-CCCc-eecCCCCeeeEEEEecCCccccccCCCCccccCcCCCCceecC
Q 045072 349 WNRLPATERARMKSRQGVRTVCFTEIDVIDS-ESGL-SVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTG 426 (556)
Q Consensus 349 ~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~-~~~~-~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TG 426 (556)
.....+++|.|+++. +++|+|. ++|. ....+ +.|||+++||+++.|||++|+.+...|. +|||+||
T Consensus 431 --------~~~~~gsvG~p~p~~-ev~i~d~~~~g~~~~~~~--~~GEi~vrGp~v~~GY~~~pe~T~~~f~-dGw~~TG 498 (660)
T PLN02861 431 --------VFSMVGTVGVPMTTI-EARLESVPEMGYDALSDV--PRGEICLRGNTLFSGYHKRQDLTEEVLI-DGWFHTG 498 (660)
T ss_pred --------cCCCCCCccCccCce-EEEEEEccccCcccCCCC--CceeEEEcCCcccccccCCHHHHHhhhh-ccCcccC
Confidence 011246899999999 9999983 3342 22333 4699999999999999999999999997 8999999
Q ss_pred ceEEEecCCcEEEEccCCCeEee-CcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEeccccc------CC
Q 045072 427 DVGVIHADGYLEIKDRSKDVIIS-GGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELE------KK 499 (556)
Q Consensus 427 D~~~~~~dg~l~~~GR~~d~i~~-~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~------~~ 499 (556)
|+|++|+||++++.||.+|+||. +|++|+|.+||++|.+||.|.+++|++.+. ++.++|+|++..+.- ..
T Consensus 499 Dlg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~~~p~V~~a~V~G~~~---~~~~~A~vv~~~~~l~~~~~~~~ 575 (660)
T PLN02861 499 DIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYSRCPLIASIWVYGNSF---ESFLVAVVVPDRQALEDWAANNN 575 (660)
T ss_pred ceEEECCCCcEEEEeccccceEcCCCeEEcHHHHHHHHhcCCCeeEEEEEecCC---cceeEEEEEcCHHHHHHHHHHcC
Confidence 99999999999999999999995 899999999999999999999999999863 456889988764310 00
Q ss_pred --CCH----------HHHHHHHHh-----cCCCCcccceeEEec-CC-----CCCCCCCccHHHHHHHHHHhcccccc
Q 045072 500 --PTE----------KEIIEYCRA-----RLPRYMVPKTVVFKE-EL-----PKTSTGKIKKFELREMAKAMGKSKVS 554 (556)
Q Consensus 500 --~~~----------~~i~~~l~~-----~l~~~~~p~~~~~v~-~l-----P~t~~GKv~r~~l~~~~~~~~~~~~~ 554 (556)
... ..+.+.+.+ .++.+..+..+.+.+ ++ .+|+++|++|+.+.+.|.+.++.-|.
T Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~i~~~~l~~~~ft~~ng~lT~t~K~~R~~i~~~y~~~I~~lY~ 653 (660)
T PLN02861 576 KTGDFKSLCKNLKARKYILDELNSTGKKLQLRGFEMLKAIHLEPNPFDIERDLITPTFKLKRPQLLKYYKDCIDQLYS 653 (660)
T ss_pred CCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCcccCcCCHHHhhhHHHHHHHHHHHHHHHHH
Confidence 111 224444443 378888888888865 46 79999999999999999999887664
No 40
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.3e-67 Score=546.17 Aligned_cols=515 Identities=26% Similarity=0.378 Sum_probs=432.0
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccc
Q 045072 10 NSSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGA 89 (556)
Q Consensus 10 ~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (556)
-...+++.+.+..+++.+|+++|+.+.++.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 13 ~~~~~n~~~~~~~~a~~~~~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~a~~~~G~ 92 (542)
T PRK07786 13 LARRQNWVNQLARHALMQPDAPALRFLGNTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLAANMLGA 92 (542)
T ss_pred cccccCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCe
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccc
Q 045072 90 ILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYE 169 (556)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (556)
+++|+++.++.+++.++++++++++++++....+.........+. ...++...+... ....++.
T Consensus 93 ~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-------------~~~~~~~ 156 (542)
T PRK07786 93 IAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVPL---LSTVVVAGGSSD-------------DSVLGYE 156 (542)
T ss_pred EEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccCc---cceEEEecCCCc-------------ccccCHH
Confidence 999999999999999999999999999988776655444332221 233333332110 0112334
Q ss_pred cccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCC-CCCCEEEEecChhhhhhchhhh
Q 045072 170 SLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSI-PKQPVYLWTLPMFHANGWSYPW 248 (556)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~pl~~~~g~~~~~ 248 (556)
+++........ ......+++++++|||||||.||+|.++|+++..........+++ ..++++++..|++|.+|+..++
T Consensus 157 ~~~~~~~~~~~-~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~ 235 (542)
T PRK07786 157 DLLAEAGPAHA-PVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAGIGSML 235 (542)
T ss_pred HHhhccCCCCC-CCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHHHHHHH
Confidence 44333222211 123456789999999999999999999999998877766666666 6788999999999999998888
Q ss_pred HhHhcCcEeEEec--CCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC-CCCCCCCeEEEEeCCCCcHHHHHHhH-hc-
Q 045072 249 GMAAVGGTNVCLR--KFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR-SEPLRNPVHILTAGAPPPAAVLFRTE-SL- 323 (556)
Q Consensus 249 ~~~~~g~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~-~~~l~~l~~v~~~g~~~~~~~~~~~~-~~- 323 (556)
.++..|+++++.+ .+++..+++.++++++|.++++|+++..+..... .....++|.+++||+++++++.+.+. .+
T Consensus 236 ~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~lr~i~~gg~~~~~~~~~~~~~~~~ 315 (542)
T PRK07786 236 PGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRDLALRVLSWGAAPASDTLLRQMAATFP 315 (542)
T ss_pred HHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccCcceEEEEECCCCCCHHHHHHHHHHcC
Confidence 9999999998865 5799999999999999999999999999987654 22223689999999999999999888 44
Q ss_pred CCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCcc
Q 045072 324 GFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMM 403 (556)
Q Consensus 324 ~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~ 403 (556)
+..+++.||+||++.+.+...... ......++|.|+++. .++|+|+ ++.+++.+ +.|||+++|+.++
T Consensus 316 ~~~l~~~YG~tE~~~~~~~~~~~~---------~~~~~~~~G~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~g~~~~ 382 (542)
T PRK07786 316 EAQILAAFGQTEMSPVTCMLLGED---------AIRKLGSVGKVIPTV-AARVVDE-NMNDVPVG--EVGEIVYRAPTLM 382 (542)
T ss_pred CCeEEeeecccccccceEecCccc---------ccccCCCccccCCCc-eEEEECC-CCCCCcCC--CceEEEEEChhhh
Confidence 789999999999987655432111 112335789999998 9999996 67888877 6899999999999
Q ss_pred ccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCC
Q 045072 404 LGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWG 483 (556)
Q Consensus 404 ~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g 483 (556)
+||+++++.+...|. ++||+|||+++++++|.+++.||.+|+|+.+|.+|++.+||++|.++|.|.+++|++.+.+..|
T Consensus 383 ~gy~~~~~~~~~~f~-~~~~~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~ 461 (542)
T PRK07786 383 SGYWNNPEATAEAFA-GGWFHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAEVENVLASHPDIVEVAVIGRADEKWG 461 (542)
T ss_pred hhhcCCHHHHHHHhh-CCcccccceEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCccEEEEEeccCcccC
Confidence 999999998888887 8999999999999999999999999999999999999999999999999999999999888778
Q ss_pred eeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHhccccccCC
Q 045072 484 ETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMGKSKVSRM 556 (556)
Q Consensus 484 ~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~~~~~~~~~ 556 (556)
+.++++++..+... ....+++.+.++++++++++|..++++++||+|++||++|++|++++.+....+.++|
T Consensus 462 ~~~~~~v~~~~~~~-~~~~~~l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~~~~~~~~~~ 533 (542)
T PRK07786 462 EVPVAVAAVRNDDA-ALTLEDLAEFLTDRLARYKHPKALEIVDALPRNPAGKVLKTELRERYGACVNVERRSA 533 (542)
T ss_pred ceEEEEEEECCCCC-CCCHHHHHHHHHhhccCCCCCCEEEEeccCCCCCcccccHHHHHHHHHhhhchhhccc
Confidence 88888888765432 2567899999999999999999999999999999999999999999998877665543
No 41
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=5.7e-67 Score=547.44 Aligned_cols=508 Identities=26% Similarity=0.389 Sum_probs=418.6
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEEC--CccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhcc
Q 045072 11 SSPLTPLGFLERAATVYGDCPSIIYN--NLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTG 88 (556)
Q Consensus 11 ~~~~t~~~~l~~~~~~~p~~~a~~~~--~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (556)
....|+.++|.+.++.+|+++|+.+. ++.+||.||.+++.++|..|.+.|+++||+|+++++|+++++++++||+++|
T Consensus 25 ~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 104 (546)
T PLN02330 25 PDKLTLPDFVLQDAELYADKVAFVEAVTGKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYGIVALGIMAAG 104 (546)
T ss_pred CCCCcHHHHHhhhhhcCCCccEEEecCCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhC
Confidence 34578999999999999999999874 5789999999999999999999999999999999999999999999999999
Q ss_pred ceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCccccc
Q 045072 89 AILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTY 168 (556)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (556)
++++|+++..+.+++.++++.++++++++++...+.+... ...++.+..... .....+
T Consensus 105 ~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~---------~~~~i~~~~~~~-------------~~~~~~ 162 (546)
T PLN02330 105 GVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGL---------GLPVIVLGEEKI-------------EGAVNW 162 (546)
T ss_pred cEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhc---------CCcEEEecCCCC-------------CCcccH
Confidence 9999999999999999999999999999998876655332 122333332210 011223
Q ss_pred ccccccCCCCC--CCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcC--CCCCCEEEEecChhhhhhc
Q 045072 169 ESLVTKGDPNF--KWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWS--IPKQPVYLWTLPMFHANGW 244 (556)
Q Consensus 169 ~~~~~~~~~~~--~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~pl~~~~g~ 244 (556)
.+++....... ........+++++++|||||||.||+|.++|.++..+......... ....+..+..+|++|.+++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~ 242 (546)
T PLN02330 163 KELLEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYGI 242 (546)
T ss_pred HHHHhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHHH
Confidence 33333221111 0112234679999999999999999999999998776543221121 2234678999999999987
Q ss_pred hh-hhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCC--CCeEEEEeCCCCcHHHHHH
Q 045072 245 SY-PWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLR--NPVHILTAGAPPPAAVLFR 319 (556)
Q Consensus 245 ~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~--~l~~v~~~g~~~~~~~~~~ 319 (556)
.. ++.++..|+++++.+.+++..+++.++++++|.+.++|+++..+..... ...+. .+|.++++|+++++++.++
T Consensus 243 ~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~~~~~~ 322 (546)
T PLN02330 243 TGICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAPELLTA 322 (546)
T ss_pred HHHHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheeeeEEEcCCcCCHHHHHH
Confidence 64 5677788999998889999999999999999999999999999987543 22233 4789999999999999999
Q ss_pred hH-hc-CCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEE
Q 045072 320 TE-SL-GFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVF 397 (556)
Q Consensus 320 ~~-~~-~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i 397 (556)
+. .+ ++++++.||+||++.+...+..... ........++|.|++++ +++|+|++++.+++.| +.|||++
T Consensus 323 ~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~------~~~~~~~~~vG~~~~~~-~v~i~d~~~~~~~p~g--~~Gel~v 393 (546)
T PLN02330 323 FEAKFPGVQVQEAYGLTEHSCITLTHGDPEK------GHGIAKKNSVGFILPNL-EVKFIDPDTGRSLPKN--TPGELCV 393 (546)
T ss_pred HHHHcCCCeEEecccccccccceecCCCccc------cccccccCccccccCCc-EEEEEeCCCCccCCCC--CceEEEE
Confidence 88 45 8999999999999765433211100 00112235789999999 9999997788899888 6899999
Q ss_pred ecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEee
Q 045072 398 RGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVAR 477 (556)
Q Consensus 398 ~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~ 477 (556)
+|+.++.||++++..+...+..+|||+|||+|++++||++++.||.+|+|+.+|++|+|.+||..+.+++.|.+++|++.
T Consensus 394 ~g~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~ 473 (546)
T PLN02330 394 RSQCVMQGYYNNKEETDRTIDEDGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVPL 473 (546)
T ss_pred ecchhhhhhccCccchhhhccCCCceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHHHHHHHHhCCchheEEEEec
Confidence 99999999999999888888779999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHhccc
Q 045072 478 PDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMGKS 551 (556)
Q Consensus 478 ~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~~~~ 551 (556)
+++..|+.++++|+..+... .+.+++.+++++++++++.|..++++++||+|++||++|++|++++....+.
T Consensus 474 ~~~~~g~~~~a~v~~~~~~~--~~~~~l~~~~~~~l~~~~~p~~~~~v~~iP~t~~GK~~r~~L~~~~~~~~~~ 545 (546)
T PLN02330 474 PDEEAGEIPAACVVINPKAK--ESEEDILNFVAANVAHYKKVRVVQFVDSIPKSLSGKIMRRLLKEKMLSINKA 545 (546)
T ss_pred cccccCceeEEEEEECCCCC--CCHHHHHHHHHHhcccccCceEEEEeccCCCCCCcceeHHHHHHHHHhhhcC
Confidence 99888888999988876543 5678899999999999999999999999999999999999999999876543
No 42
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.5e-66 Score=543.04 Aligned_cols=520 Identities=30% Similarity=0.486 Sum_probs=421.8
Q ss_pred CCCCHHHHHHHHHHhcCCCCEEEEC--C--ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhc
Q 045072 12 SPLTPLGFLERAATVYGDCPSIIYN--N--LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFT 87 (556)
Q Consensus 12 ~~~t~~~~l~~~~~~~p~~~a~~~~--~--~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~ 87 (556)
.+.++.++|+++++.+|++.++.+. + +++||.||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++
T Consensus 8 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~~ 87 (539)
T PRK07008 8 MPLLISSLIAHAARHAGDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSGS 87 (539)
T ss_pred CCCCHHHHHHHHHhhCCCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhc
Confidence 4468899999999999999888752 2 68999999999999999999999999999999999999999999999999
Q ss_pred cceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccc
Q 045072 88 GAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCT 167 (556)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (556)
|+++++++|..+.+++.++++.+++++++++.+..+.+.+....... ...++...+.... +.. ......
T Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-------~~~-~~~~~~ 156 (539)
T PRK07008 88 GAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPN---VKGWVAMTDAAHL-------PAG-STPLLC 156 (539)
T ss_pred CcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCCC---ceEEEEEccCCcc-------ccC-Cccccc
Confidence 99999999999999999999999999999998877665554433321 2223333222110 000 011233
Q ss_pred cccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHh--hhhhhcCCCCCCEEEEecChhhhhhch
Q 045072 168 YESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTV--DSLIDWSIPKQPVYLWTLPMFHANGWS 245 (556)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~pl~~~~g~~ 245 (556)
+++++........+ ....++++++++|||||||.||+|+++|++++.+.. .....+++..+|+++...|++|.+++.
T Consensus 157 ~~~l~~~~~~~~~~-~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~ 235 (539)
T PRK07008 157 YETLVGAQDGDYDW-PRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNAWG 235 (539)
T ss_pred HHHHhcccCCCcCc-ccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhhHH
Confidence 44444332222221 134567899999999999999999999999864332 233456788899999999999988877
Q ss_pred hhhHhHhcCcEeEEec-CCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHHHHhH-
Q 045072 246 YPWGMAAVGGTNVCLR-KFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVLFRTE- 321 (556)
Q Consensus 246 ~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~~~~~- 321 (556)
..+.++..|+++++.+ .+++..+++.++++++|++.++|+++..+.+... ...+++++.++++|+++++++.+++.
T Consensus 236 ~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~ 315 (539)
T PRK07008 236 LPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFSTLRRTVIGGSACPPAMIRTFED 315 (539)
T ss_pred HHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHH
Confidence 7778888999988875 5789999999999999999999999999987654 34677999999999999999999986
Q ss_pred hcCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCC
Q 045072 322 SLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGS 401 (556)
Q Consensus 322 ~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~ 401 (556)
.+++.+++.||+||++..+..+...................++|.|++++ .++|+|+ ++.+++.++.+.|||+++|+.
T Consensus 316 ~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~-~~~i~d~-~~~~~~~~~~~~Gei~v~g~~ 393 (539)
T PRK07008 316 EYGVEVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGV-DMKIVGD-DGRELPWDGKAFGDLQVRGPW 393 (539)
T ss_pred HhCCceecccccccccccceecccccccccCCchhhhhhcccCCccccce-EEEEECC-CCCccCCCCCcceEEEEeCCc
Confidence 67999999999999987654433211111111111112235789999999 9999997 677777654457999999999
Q ss_pred ccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCC
Q 045072 402 MMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEF 481 (556)
Q Consensus 402 ~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~ 481 (556)
++.||++++. ..+. +|||+|||++++++||++++.||.+|+|+.+|++|+|.+||..+..+|.|.+++|++.+++.
T Consensus 394 ~~~gy~~~~~---~~~~-~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~v~~~~v~~~~~~~ 469 (539)
T PRK07008 394 VIDRYFRGDA---SPLV-DGWFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDIENVAVAHPAVAEAACIACAHPK 469 (539)
T ss_pred cchhhcCChh---hhhc-CCCcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHHHHHHHhCCceeEEEEEecCCch
Confidence 9999999884 2344 78999999999999999999999999999999999999999999999999999999999888
Q ss_pred CCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHhccc
Q 045072 482 WGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMGKS 551 (556)
Q Consensus 482 ~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~~~~ 551 (556)
.++.++++|+..++.. .+.+++.+++++++++|+.|..++++++||+|++||++|++|++++.+....
T Consensus 470 ~~~~~~~~v~~~~~~~--~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sgKi~r~~l~~~~~~~~~~ 537 (539)
T PRK07008 470 WDERPLLVVVKRPGAE--VTREELLAFYEGKVAKWWIPDDVVFVDAIPHTATGKLQKLKLREQFRDYVLP 537 (539)
T ss_pred hccceEEEEEeCCCCc--cCHHHHHHHHHhhcccccCCeEEEEecCCCCCCccceeHHHHHHHHHhhccc
Confidence 7888888888766543 5778999999999999999999999999999999999999999999876543
No 43
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=8.6e-67 Score=544.04 Aligned_cols=497 Identities=24% Similarity=0.356 Sum_probs=412.6
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 045072 11 SSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAI 90 (556)
Q Consensus 11 ~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (556)
+...++.++|+++++.+|+++|+++.++++||+||.++++++|.+|.+.|+++|++|+++++|+++++++++||+++|++
T Consensus 20 ~~~~~l~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~ 99 (527)
T TIGR02275 20 WQDKPLTDILRDQAARYPDAIAIICGNRQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKLGIA 99 (527)
T ss_pred ccCCcHHHHHHHHHHHCCCceEEEeCCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHcCeE
Confidence 34567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHHhccCCeEEEEeccchh-----hHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcc
Q 045072 91 LNNINTRLDARTISVLLQHSESKLVLVDYQSRN-----LVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFC 165 (556)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (556)
++++++..+.+++.++++.+++++++++..... .........+. ...++...+....
T Consensus 100 ~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--------------- 161 (527)
T TIGR02275 100 PVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPT---LRNIIVAGQTRVE--------------- 161 (527)
T ss_pred EeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCc---ceEEEEecCCCCc---------------
Confidence 999999999999999999999999999865421 11111111111 1222222211000
Q ss_pred cccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhch
Q 045072 166 CTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWS 245 (556)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~ 245 (556)
......+....... ......++++++++|||||||.||+|.++|.++..+.......+.+..+++++..+|++|.+++.
T Consensus 162 ~~~~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~~~ 240 (527)
T TIGR02275 162 AELFLWLESPAEPV-KFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYPLS 240 (527)
T ss_pred chhhHHhhCcCccc-cCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhhhh
Confidence 00111111111111 11234568999999999999999999999999988877777777888999999999999999876
Q ss_pred h--hhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHHHHhH
Q 045072 246 Y--PWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVLFRTE 321 (556)
Q Consensus 246 ~--~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~~~~~ 321 (556)
. .+.++..|+++++.+.+++..+++.++++++|+++++|.++..+.+... ...++++|.+++||++++.++.+++.
T Consensus 241 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~ 320 (527)
T TIGR02275 241 SPGALGVFYAGGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQVGGAKFSEAAARRVP 320 (527)
T ss_pred HHHHHHHHhcCCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHH
Confidence 4 6788888999888888899999999999999999999999999887654 45577899999999999999999987
Q ss_pred -hcCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecC
Q 045072 322 -SLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGG 400 (556)
Q Consensus 322 -~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~ 400 (556)
.+++++++.||+||++....... .......+++|.|+++...++|+|+ ++.+++.| +.|||+++|+
T Consensus 321 ~~~g~~~~~~YG~tE~~~~~~~~~----------~~~~~~~~~~G~~~~~~~~v~i~d~-~g~~~~~g--~~Gei~v~g~ 387 (527)
T TIGR02275 321 AVFGCQLQQVFGMAEGLVNYTRLD----------DPAEIIFTTQGRPMSPDDEVRVVDD-HGNPVAPG--ETGMLLTRGP 387 (527)
T ss_pred HHhCCeEEeeeccCccCccccCCC----------CccccccccCCCCCCCCceEEEECC-CCCCCCCC--CceEEEecCC
Confidence 57999999999999643221110 0011223578999853338999997 67888887 6899999999
Q ss_pred CccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCC
Q 045072 401 SMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDE 480 (556)
Q Consensus 401 ~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~ 480 (556)
.++.||+++++.+...+.++|||+|||+|++++||++++.||.+|+|+.+|++|+|.+||+.|.++|+|.+++|++.+++
T Consensus 388 ~~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~ 467 (527)
T TIGR02275 388 YTFRGYYKAPEHNAAAFDAEGFYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAEEIENLLLAHPAVHDAALVSMPDE 467 (527)
T ss_pred ccchhhcCChhHhHhhcCcCCCEEcCceEEEcCCccEEEEecccceeecCCEEECHHHHHHHHHhCCCceEEEEEecCCc
Confidence 99999999999998888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeeEEEEEecccccCCCCHHHHHHHHHhc-CCCCcccceeEEecCCCCCCCCCccHHHHH
Q 045072 481 FWGETPCAFLSLKAELEKKPTEKEIIEYCRAR-LPRYMVPKTVVFKEELPKTSTGKIKKFELR 542 (556)
Q Consensus 481 ~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~-l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~ 542 (556)
..++.++++|+..++. .+..++.++++++ ++++++|..+.++++||+|++||++|++|+
T Consensus 468 ~~~~~~~a~vv~~~~~---~~~~~l~~~l~~~~l~~~~~P~~i~~v~~iP~t~sGKv~r~~L~ 527 (527)
T TIGR02275 468 LLGEKSCAFIVVRDPA---LKAAQLRRFLRERGLAEYKLPDRVEFIDSLPLTAVGKIDKKALR 527 (527)
T ss_pred ccccEEEEEEEECCCC---CCHHHHHHHHHhCCCccccCCCEEEEeccCCCCCccceeHHhcC
Confidence 8888899998876542 5678999999985 999999999999999999999999999874
No 44
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.7e-67 Score=557.33 Aligned_cols=501 Identities=21% Similarity=0.263 Sum_probs=398.1
Q ss_pred hcCCCCEEEECC-----ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCH
Q 045072 26 VYGDCPSIIYNN-----LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDA 100 (556)
Q Consensus 26 ~~p~~~a~~~~~-----~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~ 100 (556)
.+|+++|+++.+ +++||+||.+++.++|.+|++.|+++||+|+++++|++++++++|||+++|+++++++|.++.
T Consensus 96 ~~~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~lA~~~~Gav~v~l~~~~~~ 175 (655)
T PRK03584 96 RRDDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAMLATASLGAIWSSCSPDFGV 175 (655)
T ss_pred CCCCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEeeCCCCCH
Confidence 579999999864 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCeEEEEeccc---------hhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccccc
Q 045072 101 RTISVLLQHSESKLVLVDYQS---------RNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESL 171 (556)
Q Consensus 101 ~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (556)
+++.+++++++++++|+++.. .+.+.++...++. ...++.+...... . ..........++++
T Consensus 176 ~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~-----~-~~~~~~~~~~~~~~ 246 (655)
T PRK03584 176 QGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPS---LEHVVVVPYLGPA-----A-AAAALPGALLWEDF 246 (655)
T ss_pred HHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCC---ccEEEEEecCCCc-----c-cccccCCcccHHHH
Confidence 999999999999999997653 2233333333221 2334444322110 0 00001112334444
Q ss_pred cccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHH-HhhhhhhcCCCCCCEEEEecChhhhhhchhhhHh
Q 045072 172 VTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVM-TVDSLIDWSIPKQPVYLWTLPMFHANGWSYPWGM 250 (556)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~ 250 (556)
+...........+...+++++|+|||||||.||||+++|++++.+ .......+.+.++|++++..++.|..+ ...+.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~ 325 (655)
T PRK03584 247 LAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGPGDRFFWYTTCGWMMW-NWLVSG 325 (655)
T ss_pred hhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCCCCEEEEcCCchHHhH-HHHHHH
Confidence 432111111122356789999999999999999999999987643 444445577889999999988887643 345678
Q ss_pred HhcCcEeEEecC----CCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC----CCCCCCCeEEEEeCCCCcHHHHHHhH-
Q 045072 251 AAVGGTNVCLRK----FDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR----SEPLRNPVHILTAGAPPPAAVLFRTE- 321 (556)
Q Consensus 251 ~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----~~~l~~l~~v~~~g~~~~~~~~~~~~- 321 (556)
+..|+++++... .++..++++++++++|++.++|++++.+.+... ...++++|.++++|+++++++.+++.
T Consensus 326 L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~~Ge~l~~~~~~~~~~ 405 (655)
T PRK03584 326 LLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTIGSTGSPLPPEGFDWVYE 405 (655)
T ss_pred HHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEEEEecCCCCHHHHHHHHH
Confidence 899999988752 579999999999999999999999999876432 35678999999999999999999887
Q ss_pred hc--CCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEec
Q 045072 322 SL--GFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRG 399 (556)
Q Consensus 322 ~~--~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~ 399 (556)
.+ ++.+.+.||+||+++...... .......+++|.|.+++ +++|+|+ +|.++ .+ +.|||+|+|
T Consensus 406 ~~~~~~~~~~~yG~TE~~~~~~~~~----------~~~~~~~g~~g~p~~g~-~~~ivd~-~g~~~-~g--~~GeL~v~g 470 (655)
T PRK03584 406 HVKADVWLASISGGTDICSCFVGGN----------PLLPVYRGEIQCRGLGM-AVEAWDE-DGRPV-VG--EVGELVCTK 470 (655)
T ss_pred HhCCCceEEeccChHhhhcccccCC----------CCCCcCCCccCCCcCCc-eeEEECC-CCCCC-CC--CceEEEEcc
Confidence 44 578999999999865332211 00112346789999999 9999997 67777 55 689999999
Q ss_pred C--CccccccCCCCcccc--C-c-CCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccE
Q 045072 400 G--SMMLGYLKDPNGTRK--C-M-KDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAA 473 (556)
Q Consensus 400 ~--~~~~gy~~~~~~~~~--~-~-~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~ 473 (556)
| +++.|||++++.+.. . + ..++||+|||+|++|+||++++.||.||+||++|.+|+|.|||++|.+||.|.+++
T Consensus 471 p~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p~EIE~~l~~~p~V~ea~ 550 (655)
T PRK03584 471 PFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGTAEIYRQVEALPEVLDSL 550 (655)
T ss_pred CCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECCCCeEEEEeeccCeeecCcEEECHHHHHHHHHhCCCcceEE
Confidence 6 789999999975431 1 1 12579999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCCeeeEEEEEecccccC-CCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHhccc
Q 045072 474 VVARPDEFWGETPCAFLSLKAELEK-KPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMGKS 551 (556)
Q Consensus 474 v~~~~~~~~g~~~~~~v~~~~~~~~-~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~~~~ 551 (556)
|++.+++..|+.++++|++.++... +...++|.++++++++++++|..++++++||+|++||++|+.|++++.+....
T Consensus 551 vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~v~~lP~t~sGKi~r~~lr~~~~~~~~~ 629 (655)
T PRK03584 551 VIGQEWPDGDVRMPLFVVLAEGVTLDDALRARIRTTIRTNLSPRHVPDKIIAVPDIPRTLSGKKVELPVKKLLHGRPVK 629 (655)
T ss_pred EEeeEcCCCCEEEEEEEEECCCCCCcHHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCccchHHHHHHHHcCCCCC
Confidence 9999998889999999998876431 11246899999999999999999999999999999999999999998765433
No 45
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.1e-67 Score=545.03 Aligned_cols=510 Identities=31% Similarity=0.441 Sum_probs=432.0
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 045072 11 SSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAI 90 (556)
Q Consensus 11 ~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (556)
.+..|+.++|..+++.+|+++|+.+.+..+||.||.+.+.++|..|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 8 ~~~~~l~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G~~ 87 (523)
T PRK08316 8 ARRQTIGDILRRSARRYPDKTALVFGDRSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAGAV 87 (523)
T ss_pred ccCCCHHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcE
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCccccccc
Q 045072 91 LNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYES 170 (556)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (556)
++|+++..+.+++.++++.+++++++++.+....+......... ..+....... ..........+.+
T Consensus 88 ~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~----~~~~~~~~~~---------~~~~~~~~~~~~~ 154 (523)
T PRK08316 88 HVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLPV----DTLILSLVLG---------GREAPGGWLDFAD 154 (523)
T ss_pred EEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcCc----cceeeeeccc---------ccccccchhhHHH
Confidence 99999999999999999999999999998887766654433221 1111110000 0000011123333
Q ss_pred ccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchh-hhH
Q 045072 171 LVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSY-PWG 249 (556)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~-~~~ 249 (556)
+....... ........+++++++|||||||.||+|.++|.+++.........+++.+++++++.+|++|..++.. ++.
T Consensus 155 ~~~~~~~~-~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~ 233 (523)
T PRK08316 155 WAEAGSVA-EPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGP 233 (523)
T ss_pred HHhcCCCc-cCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHHHHHHH
Confidence 33222211 1222356789999999999999999999999999888777777788999999999999999998765 445
Q ss_pred hHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHHHHhHh-c-CC
Q 045072 250 MAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVLFRTES-L-GF 325 (556)
Q Consensus 250 ~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~~~~~~-~-~~ 325 (556)
++..|+++++.+..++..+++.++++++|++.++|+++..+.+... ...++++|.+++||++++.+..+.+.+ + ++
T Consensus 234 ~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~ 313 (523)
T PRK08316 234 YLYVGATNVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLSSLRKGYYGASIMPVEVLKELRERLPGL 313 (523)
T ss_pred HHhcCceEEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCcccceEEEEcCCcCCHHHHHHHHHHcCCC
Confidence 6788999999888899999999999999999999999999987754 456789999999999999999999884 4 78
Q ss_pred eEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCcccc
Q 045072 326 LVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLG 405 (556)
Q Consensus 326 ~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~g 405 (556)
.+++.||+||++.++...... ......+++|.+.++. +++|+|+ ++.+++.+ +.|||+++|++++.|
T Consensus 314 ~~~~~YG~tE~~~~~~~~~~~---------~~~~~~~~~G~~~~~~-~~~i~~~-~~~~~~~g--~~Gei~v~~~~~~~~ 380 (523)
T PRK08316 314 RFYNCYGQTEIAPLATVLGPE---------EHLRRPGSAGRPVLNV-ETRVVDD-DGNDVAPG--EVGEIVHRSPQLMLG 380 (523)
T ss_pred ceeeeecccccCccccccCcc---------ccccccCCcccCCCCc-EEEEEcC-CCCCCCCC--CcceEEEECCchhhh
Confidence 999999999998876553211 1112346889999998 9999997 68888887 689999999999999
Q ss_pred ccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCee
Q 045072 406 YLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGET 485 (556)
Q Consensus 406 y~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~ 485 (556)
|+++++.+...|. ++||+|||+|++++||.+++.||.+|+|+.+|++|+|.+||+.+.++++|.+++|++.+++..++.
T Consensus 381 y~~~~~~~~~~~~-~~~~~TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~ 459 (523)
T PRK08316 381 YWDDPEKTAEAFR-GGWFHSGDLGVMDEEGYITVVDRKKDMIKTGGENVASREVEEALYTHPAVAEVAVIGLPDPKWIEA 459 (523)
T ss_pred hcCCHHHHHHHhh-CCCeeccceEEEcCCceEEEecccccEEEeCCeEECHHHHHHHHHhCCChheEeEecccCcccCCe
Confidence 9999998888886 899999999999999999999999999999999999999999999999999999999999988888
Q ss_pred eEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHhcc
Q 045072 486 PCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMGK 550 (556)
Q Consensus 486 ~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~~~ 550 (556)
++++++..++.. ...+++.++++++++++++|..+++++++|+|++||++|++|+++|.+.+.
T Consensus 460 ~~~~v~~~~~~~--~~~~~l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gKi~r~~l~~~~~~~~~ 522 (523)
T PRK08316 460 VTAVVVPKAGAT--VTEDELIAHCRARLAGFKVPKRVIFVDELPRNPSGKILKRELRERYAGAFT 522 (523)
T ss_pred EEEEEEECCCCC--CCHHHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHHHHhhcc
Confidence 999998876544 567889999999999999999999999999999999999999999987764
No 46
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.7e-67 Score=556.52 Aligned_cols=515 Identities=19% Similarity=0.221 Sum_probs=398.6
Q ss_pred CCCHHHHHHHHHHhcCCCCEEEEC--C---ccccHHHHHHHHHHHHHHHHHc---CCCCC-----------CEEEEEcCC
Q 045072 13 PLTPLGFLERAATVYGDCPSIIYN--N---LIYTWSQTHRRCLQLASSLSSI---GITRG-----------HVVSVVAPN 73 (556)
Q Consensus 13 ~~t~~~~l~~~~~~~p~~~a~~~~--~---~~~Ty~~l~~~~~~la~~L~~~---g~~~g-----------d~V~i~~~~ 73 (556)
-.|+.++|.++++++|+++|+.+. + +++||+||.+++.++|.+|.+. |+++| |+|+|+++|
T Consensus 60 ~~~l~~~l~~~~~~~p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N 139 (746)
T PTZ00342 60 YKHIMKLLLEKYKLNNNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSN 139 (746)
T ss_pred cchHHHHHHHHHhhcCCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCC
Confidence 679999999999999999999873 2 6899999999999999999974 99999 999999999
Q ss_pred hHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCC
Q 045072 74 IPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDND 153 (556)
Q Consensus 74 ~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (556)
+++|++++|||+++|++.+|+++.++.+++.++|++++++++|++.+..+.+.+....++. .+.+++++........
T Consensus 140 ~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~---l~~ii~~~~~~~~~~~ 216 (746)
T PTZ00342 140 SINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKNELPH---LKKLIILDTLIKSKEI 216 (746)
T ss_pred CHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhccCCC---ceEEEEECCCCccccc
Confidence 9999999999999999999999999999999999999999999987777766655544432 4456665432110000
Q ss_pred ---------------CCCcc----------------------ccC-----------------CCcccccccccccCCCCC
Q 045072 154 ---------------NKSSQ----------------------TVD-----------------SNFCCTYESLVTKGDPNF 179 (556)
Q Consensus 154 ---------------~~~~~----------------------~~~-----------------~~~~~~~~~~~~~~~~~~ 179 (556)
..... ... ......+++....... .
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~ 295 (746)
T PTZ00342 217 NINKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKTT-N 295 (746)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhccc-C
Confidence 00000 000 0000112222211111 1
Q ss_pred CCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhc--CCCCCCEEEEecChhhhhhchhhhHhHhcCcEe
Q 045072 180 KWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDW--SIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTN 257 (556)
Q Consensus 180 ~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~ 257 (556)
....+..++++++|+|||||||.||||++||+++++.+....... .....+++++.+|++|.+++...+.++..|+++
T Consensus 296 ~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~~~~~~l~~G~~i 375 (746)
T PTZ00342 296 YKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERVIAYLSFMLGGTI 375 (746)
T ss_pred CCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHHHHHHHHHcCCEE
Confidence 112234678999999999999999999999999988765543321 233568999999999999998878888899998
Q ss_pred EEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcC--------CC-C--------------------------------
Q 045072 258 VCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNL--------PR-S-------------------------------- 296 (556)
Q Consensus 258 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~--------~~-~-------------------------------- 296 (556)
++.+. ++..+++.|++++||+++++|.+++.+... +. .
T Consensus 376 ~~~~~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~v~~k 454 (746)
T PTZ00342 376 NIWSK-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFSKFLEGITHISSK 454 (746)
T ss_pred EEeCC-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcchHHHHHHHHHHH
Confidence 88765 899999999999999999999999888642 10 0
Q ss_pred ---CCCCCCeEEEEeCCCCcHHHHHHhH-hcCCeEEecccccccccceeeccccccccCCChhhhccccccCcccc-cee
Q 045072 297 ---EPLRNPVHILTAGAPPPAAVLFRTE-SLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRT-VCF 371 (556)
Q Consensus 297 ---~~l~~l~~v~~~g~~~~~~~~~~~~-~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~-~~~ 371 (556)
....++|.+++||+++++++.++++ .+|++++++||+||+++.++.... .....+++|.|+ +++
T Consensus 455 ir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g~~i~~gYGlTEt~~~~~~~~~-----------~~~~~gsvG~p~~pg~ 523 (746)
T PTZ00342 455 IKDKVNPNLEVILNGGGKLSPKIAEELSVLLNVNYYQGYGLTETTGPIFVQHA-----------DDNNTESIGGPISPNT 523 (746)
T ss_pred HHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcCCCEEEeeccCcccceeeeccC-----------CCCCcccccCcCCCcE
Confidence 0125899999999999999999998 579999999999999876554321 112347899998 888
Q ss_pred eeeEEecCCCCceecCCCCeeeEEEEecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEe-eC
Q 045072 372 TEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVII-SG 450 (556)
Q Consensus 372 ~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~-~~ 450 (556)
+++|+|.+++.....+ ..|||+++||.+|.|||++|+.|...|..+|||+|||+|++|+||++++.||.+|+|| .+
T Consensus 524 -e~ki~d~~~~~~~~~~--~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~dG~l~i~gR~kdlIkls~ 600 (746)
T PTZ00342 524 -KYKVRTWETYKATDTL--PKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINKNGSLTFLDRSKGLVKLSQ 600 (746)
T ss_pred -EEEEecccccccCCCC--CceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECCCCeEEEEccCCCeEEeCC
Confidence 9999985444433333 3599999999999999999999999998899999999999999999999999999999 68
Q ss_pred cEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEeccccc---------------CCCC--------------
Q 045072 451 GENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELE---------------KKPT-------------- 501 (556)
Q Consensus 451 G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~---------------~~~~-------------- 501 (556)
|++|+|.+||+++.++|.|.+|+|++.... ..++|+|+++.+.- ....
T Consensus 601 Ge~I~p~eIE~~l~~~p~V~~~~VvG~~~~---~~~~Alvv~d~~~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 677 (746)
T PTZ00342 601 GEYIETDMLNNLYSQISFINFCVVYGDDSM---DGPLAIISVDKYLLFKCLKDDNMLESTGINEKNYLEKLTDETINNNI 677 (746)
T ss_pred CEEEchHHHHHHHhcCCCccEEEEEccCCc---cccEEEEECCHHHHHHHHHhcCCccccccCcccHHHHhhhhhhccHH
Confidence 999999999999999999999999997432 25889998875310 0000
Q ss_pred -HHHHHHHH-----HhcCCCCcccceeEEec-CC----CCCCCCCccHHHHHHHHHHhc
Q 045072 502 -EKEIIEYC-----RARLPRYMVPKTVVFKE-EL----PKTSTGKIKKFELREMAKAMG 549 (556)
Q Consensus 502 -~~~i~~~l-----~~~l~~~~~p~~~~~v~-~l----P~t~~GKv~r~~l~~~~~~~~ 549 (556)
.+.+.+.+ ...++.|..+..|.++. ++ -+||+.|++|+.+.+.|+..+
T Consensus 678 ~~~~v~~~~~~~~~~~~l~~~e~i~~~~l~~~~~t~~~~lTpt~KlkR~~v~~~y~~~i 736 (746)
T PTZ00342 678 YVDYVKGKMLEVYKKTNLNRYNIINDIYLTSKVWDTNNYLTPTFKVKRFYVFKDYAFFI 736 (746)
T ss_pred HHHHHHHHHHHHHHHhCCccceeeeeEEEecCCCCCCCccChhhhhhHHHHHHHHHHHH
Confidence 11112222 22588898888888875 23 289999999999999998543
No 47
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.2e-67 Score=546.56 Aligned_cols=508 Identities=23% Similarity=0.346 Sum_probs=407.5
Q ss_pred CCCHHHHHHHHHHhcCCCCEEEECC--ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 045072 13 PLTPLGFLERAATVYGDCPSIIYNN--LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAI 90 (556)
Q Consensus 13 ~~t~~~~l~~~~~~~p~~~a~~~~~--~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (556)
..++.++|.++++++|+++|+++.+ +.+||+||.++++++|.+|.+.|+++||+|+++++|++++++++|||+++|++
T Consensus 15 ~~~l~~~l~~~a~~~p~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 94 (534)
T PRK05852 15 GPRIADLVEVAATRLPEAPALVVTADRIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVALLAASRADLV 94 (534)
T ss_pred cccHHHHHHHHHHhCCCCcEEEecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCcE
Confidence 3568999999999999999998854 57999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCccccccc
Q 045072 91 LNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYES 170 (556)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (556)
+++++|.++.+++.+++++++++++|++.+.......... ...+..+........ .... ....+..
T Consensus 95 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-----~~~~----~~~~~~~ 160 (534)
T PRK05852 95 VVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTT-----RWWPLTVNVGGDSGP-----SGGT----LSVHLDA 160 (534)
T ss_pred EeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccc-----cccceeeeecccccc-----cccc----ccccccc
Confidence 9999999999999999999999999997653321111000 001111111111000 0000 0000000
Q ss_pred ccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchh-hhH
Q 045072 171 LVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSY-PWG 249 (556)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~-~~~ 249 (556)
... . ...........++.++++|||||||.||+|.++|+++..........+.+..+|++++.+|++|.+++.. ++.
T Consensus 161 ~~~-~-~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~ 238 (534)
T PRK05852 161 ATE-P-TPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVMPLYHGHGLIAALLA 238 (534)
T ss_pred ccC-C-CccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCcceEEEecCcchhHHHHHHHHH
Confidence 000 0 0000011122468899999999999999999999999888877777788899999999999999999876 556
Q ss_pred hHhcCcEeEEec--CCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC----CCCCCCCeEEEEeCCCCcHHHHHHhH-h
Q 045072 250 MAAVGGTNVCLR--KFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR----SEPLRNPVHILTAGAPPPAAVLFRTE-S 322 (556)
Q Consensus 250 ~~~~g~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----~~~l~~l~~v~~~g~~~~~~~~~~~~-~ 322 (556)
++..|+++++.. .+++..+++.++++++|.++++|+++..+.+... ....+++|.+.++|+++++.+.+.+. .
T Consensus 239 ~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~ 318 (534)
T PRK05852 239 TLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCSAPLTAETAQALQTE 318 (534)
T ss_pred HHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECCCCCCHHHHHHHHHH
Confidence 666777766643 4789999999999999999999999999987653 23467899999999999999999888 5
Q ss_pred cCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCc
Q 045072 323 LGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSM 402 (556)
Q Consensus 323 ~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~ 402 (556)
++..+++.||+||++..++......... ........+..|. .+++ +++|+|+ ++.+++.+ +.|||+++|+.+
T Consensus 319 ~~~~v~~~YG~tE~~~~~~~~~~~~~~~---~~~~~~~~g~~g~-~~g~-~~~i~d~-~g~~~~~g--~~Gel~v~g~~v 390 (534)
T PRK05852 319 FAAPVVCAFGMTEATHQVTTTQIEGIGQ---TENPVVSTGLVGR-STGA-QIRIVGS-DGLPLPAG--AVGEVWLRGTTV 390 (534)
T ss_pred hCCChhhccCccccchhhhcCCcccccc---ccCcccccccCCC-CCCC-eEEEECC-CCCCCCCC--CceEEEEecCcc
Confidence 7999999999999987665432110000 0000011223343 6788 9999998 68888887 689999999999
Q ss_pred cccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCC
Q 045072 403 MLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFW 482 (556)
Q Consensus 403 ~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~ 482 (556)
++||+++++.+...|. +|||+|||+|++|+||++++.||.+|+|+.+|.+|+|.+||.++.++|+|.+++|++.+++..
T Consensus 391 ~~gY~~~~~~t~~~~~-~g~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~V~~~~v~g~~~~~~ 469 (534)
T PRK05852 391 VRGYLGDPTITAANFT-DGWLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPERVEGVLASHPNVMEAAVFGVPDQLY 469 (534)
T ss_pred cchhcCCcccchhhhc-CCCcccCceEEEeCCCcEEEEecchhhEEECCEEECHHHHHHHHHhCCCeeeEEEEecCCcCc
Confidence 9999999999988887 899999999999999999999999999999999999999999999999999999999999888
Q ss_pred CeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHH
Q 045072 483 GETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKA 547 (556)
Q Consensus 483 g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 547 (556)
|+.++++|+..+... .+.+++.++++++++++++|..++++++||+|++||++|++|+++|..
T Consensus 470 g~~~~~~vv~~~~~~--~~~~~i~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~ 532 (534)
T PRK05852 470 GEAVAAVIVPRESAP--PTAEELVQFCRERLAAFEIPASFQEASGLPHTAKGSLDRRAVAEQFGH 532 (534)
T ss_pred CceEEEEEEECCCCC--CCHHHHHHHHHHhcccccCCeEEEEhhhcCCCCCccccHHHHHHHhcc
Confidence 888999888766543 578899999999999999999999999999999999999999998853
No 48
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=1.5e-66 Score=545.03 Aligned_cols=511 Identities=25% Similarity=0.378 Sum_probs=424.5
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCEEEECC-ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhcc
Q 045072 10 NSSPLTPLGFLERAATVYGDCPSIIYNN-LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTG 88 (556)
Q Consensus 10 ~~~~~t~~~~l~~~~~~~p~~~a~~~~~-~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (556)
.+...|+.++|+++++.+|+++|+++.+ +++||+||.++++++|++|++.|+++||+|+++++|+++++++++||+++|
T Consensus 19 ~~~~~~l~~~~~~~~~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~G 98 (547)
T PRK06087 19 YWGDASLADYWQQTARAMPDKIAVVDNHGASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKVG 98 (547)
T ss_pred CCCCCCHHHHHHHHHHHCCCceEEEcCCCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcC
Confidence 4566789999999999999999999875 799999999999999999999999999999999999999999999999999
Q ss_pred ceEeccCCCCCHHHHHHHHhccCCeEEEEeccc-----hhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCC
Q 045072 89 AILNNINTRLDARTISVLLQHSESKLVLVDYQS-----RNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSN 163 (556)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (556)
++++|++|.++.+++.++++.+++++++++... ...+......+.. ...++..+..... .
T Consensus 99 ~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~------------~ 163 (547)
T PRK06087 99 AVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQ---LQQIVGVDKLAPA------------T 163 (547)
T ss_pred cEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCC---CcEEEEeCCcCCC------------c
Confidence 999999999999999999999999999997643 2233333332221 2234444332110 0
Q ss_pred cccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhh
Q 045072 164 FCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANG 243 (556)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g 243 (556)
....+.+++....... .....+.+++++++|||||||.||+|.++|.++..........+++.+++++++.+|++|.+|
T Consensus 164 ~~~~~~~~~~~~~~~~-~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 242 (547)
T PRK06087 164 SSLSLSQIIADYEPLT-TAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATG 242 (547)
T ss_pred CccCHHHHhccCCccc-CCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeEEEecchHHHHH
Confidence 0112333332221111 112345789999999999999999999999999887777666778899999999999999998
Q ss_pred chh-hhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHHHHh
Q 045072 244 WSY-PWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVLFRT 320 (556)
Q Consensus 244 ~~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~~~~ 320 (556)
+.. ++.++..|+++++...+++..+++.++++++++++.+|.++..+++... ...++++|.+++||+++++++.+.+
T Consensus 243 ~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~lr~i~~gG~~~~~~~~~~~ 322 (547)
T PRK06087 243 FLHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLSALRFFLCGGTTIPKKVAREC 322 (547)
T ss_pred HHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCCCeEEEEEcCCCCCHHHHHHH
Confidence 754 5667788999999888999999999999999999988777776666543 4467799999999999999999988
Q ss_pred HhcCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecC
Q 045072 321 ESLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGG 400 (556)
Q Consensus 321 ~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~ 400 (556)
...++++++.||+||++++.+..... .......+.|.+.++. .++|+|+ ++.+++.+ +.|||+++|+
T Consensus 323 ~~~~~~l~~~YG~TE~~~~~~~~~~~---------~~~~~~~~~G~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~g~ 389 (547)
T PRK06087 323 QQRGIKLLSVYGSTESSPHAVVNLDD---------PLSRFMHTDGYAAAGV-EIKVVDE-ARKTLPPG--CEGEEASRGP 389 (547)
T ss_pred HHcCCcEEEEecccccCCccccCCCc---------chhhcCCcCCccCCCc-eEEEEcC-CCCCCcCC--CcceEEEecc
Confidence 87799999999999998776543211 0111234679999998 9999996 78888887 6799999999
Q ss_pred CccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCC
Q 045072 401 SMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDE 480 (556)
Q Consensus 401 ~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~ 480 (556)
.++.||+++++.+...+..++||+|||+++++++|.+++.||.+|+|+.+|++|+|.+||++|.++|+|.+++|++.+++
T Consensus 390 ~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~ 469 (547)
T PRK06087 390 NVFMGYLDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMPDE 469 (547)
T ss_pred cccccccCCHHHHHHHhCCCCCcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHHHHHHHHhCCCeeEEEEEecCCC
Confidence 99999999999888888778999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCeeeEEEEEecccccCCCCHHHHHHHHH-hcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHhcc
Q 045072 481 FWGETPCAFLSLKAELEKKPTEKEIIEYCR-ARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMGK 550 (556)
Q Consensus 481 ~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~-~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~~~ 550 (556)
..|+.++++++..+.. ...+.+++.+++. +.++++++|..+.++++||+|.+||++|++|++++.+.+.
T Consensus 470 ~~g~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~l~~~~~P~~i~~v~~iP~t~sGK~~r~~l~~~~~~~~~ 539 (547)
T PRK06087 470 RLGERSCAYVVLKAPH-HSLTLEEVVAFFSRKRVAKYKYPEHIVVIDKLPRTASGKIQKFLLRKDIMRRLT 539 (547)
T ss_pred CcCceEEEEEEECCCC-CCCCHHHHHHHHHhccccccCCCeEEEEeccCCCCCCCcCcHHHHHHHHHHHhh
Confidence 8889999988876532 2256788888875 5799999999999999999999999999999999887654
No 49
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=3.1e-67 Score=550.82 Aligned_cols=510 Identities=21% Similarity=0.248 Sum_probs=397.0
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCEEEECCc----------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHH
Q 045072 10 NSSPLTPLGFLERAATVYGDCPSIIYNNL----------IYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYE 79 (556)
Q Consensus 10 ~~~~~t~~~~l~~~~~~~p~~~a~~~~~~----------~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~ 79 (556)
++...++.+.|.+.++++|+++|+++.+. ++||+||.++++++|.+|.+.|+++||+|+++++|++++++
T Consensus 2 ~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~ 81 (552)
T PRK09274 2 MASMANIARHLPRAAQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFA 81 (552)
T ss_pred chhhhhHHHHHHHHHHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHH
Confidence 45667899999999999999999998654 89999999999999999999999999999999999999999
Q ss_pred HHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccc
Q 045072 80 AHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQT 159 (556)
Q Consensus 80 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (556)
+++||+++|++++|++|.++.+++.+++++++++++|++++.. ....... ... .....++.+.....
T Consensus 82 ~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~-~~~~~~~-~~~-~~~~~~i~~~~~~~---------- 148 (552)
T PRK09274 82 LTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAH-LARRLFG-WGK-PSVRRLVTVGGRLL---------- 148 (552)
T ss_pred HHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHH-HHHHHhc-cCc-cchhheeccccccc----------
Confidence 9999999999999999999999999999999999999865211 1111111 000 00112222221100
Q ss_pred cCCCcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChh
Q 045072 160 VDSNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMF 239 (556)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~ 239 (556)
.....++++...............++++++++|||||||.||+|.++|+++...+......+++.++++.++.+|++
T Consensus 149 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~ 225 (552)
T PRK09274 149 ---WGGTTLATLLRDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIDLPTFPLF 225 (552)
T ss_pred ---cCCccHHHhcccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCCCceeeeccCHH
Confidence 00112333221111111111224568999999999999999999999999988887777778889999999999998
Q ss_pred hhhhchhhhHhHhcCcEeEEec-------CCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCC
Q 045072 240 HANGWSYPWGMAAVGGTNVCLR-------KFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGA 310 (556)
Q Consensus 240 ~~~g~~~~~~~~~~g~~~~~~~-------~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~ 310 (556)
|.+++ ..|++.++.. .+++..+++.++++++|+++++|++++.+.+... ...++++|.+++||+
T Consensus 226 ~~~~~-------~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~ 298 (552)
T PRK09274 226 ALFGP-------ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIKLPSLRRVISAGA 298 (552)
T ss_pred Hhhhh-------hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCCCchhhEEEecCC
Confidence 76543 3466666543 3688999999999999999999999999987654 447889999999999
Q ss_pred CCcHHHHHHhHh-c--CCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCC-------
Q 045072 311 PPPAAVLFRTES-L--GFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSE------- 380 (556)
Q Consensus 311 ~~~~~~~~~~~~-~--~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~------- 380 (556)
++++++.+++.+ + ++++++.||+||+++++....... ..............++|.|++++ +++|+|+.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~-~~~~~~~~~~~~~~~vG~~~~~~-~~~ivd~~~~~~~~~ 376 (552)
T PRK09274 299 PVPIAVIERFRAMLPPDAEILTPYGATEALPISSIESREI-LFATRAATDNGAGICVGRPVDGV-EVRIIAISDAPIPEW 376 (552)
T ss_pred cCCHHHHHHHHHHcCCCceEEccccccccceeEeecchhh-hccccccccCCCCcccCccCCCc-eEEEEeccccccccc
Confidence 999999999884 4 579999999999987654332110 00000000011123689999999 99999953
Q ss_pred -CCceecCCCCeeeEEEEecCCccccccCCCCccccCcC--CCC--ceecCceEEEecCCcEEEEccCCCeEeeCcEeeC
Q 045072 381 -SGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMK--DDG--WFYTGDVGVIHADGYLEIKDRSKDVIISGGENLS 455 (556)
Q Consensus 381 -~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~--~~~--~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~ 455 (556)
++.+++.| +.|||+++|++++.|||++++.+...+. .+| ||+|||+|++|+||++++.||.+|+|+.+|++|+
T Consensus 377 ~~~~~~~~g--~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~ 454 (552)
T PRK09274 377 DDALRLATG--EIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRVETAGGTLY 454 (552)
T ss_pred cccccCCCC--CeeEEEEecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEEEeccCCeEEECCEEEC
Confidence 45677777 6899999999999999999998876652 356 9999999999999999999999999999999999
Q ss_pred hHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCC---CcccceeEEecCCCCC-
Q 045072 456 SVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPR---YMVPKTVVFKEELPKT- 531 (556)
Q Consensus 456 ~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~---~~~p~~~~~v~~lP~t- 531 (556)
|.+||++|.+||+|.+++|++.+++. ++.++++|+..++.. ...+++.+.+++.+.. ++.|..++++++||+|
T Consensus 455 p~eIE~~l~~~p~V~~~~v~~~~~~~-~~~~~~~v~~~~~~~--~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~lP~t~ 531 (552)
T PRK09274 455 TIPCERIFNTHPGVKRSALVGVGVPG-AQRPVLCVELEPGVA--CSKSALYQELRALAAAHPHTAGIERFLIHPSFPVDI 531 (552)
T ss_pred cHHHHHHHHhCcccceeEEEEeCCCC-CceEEEEEEccCccc--cchHHHhhhhHHHHHhcCCCcceeEEeccCCCCccc
Confidence 99999999999999999999998764 567888888776643 3444555666555443 4566789999999999
Q ss_pred -CCCCccHHHHHHHHHHhc
Q 045072 532 -STGKIKKFELREMAKAMG 549 (556)
Q Consensus 532 -~~GKv~r~~l~~~~~~~~ 549 (556)
++||++|++|++++.+..
T Consensus 532 ~~~GKi~r~~L~~~~~~~~ 550 (552)
T PRK09274 532 RHNAKIFREKLAVWAAKQL 550 (552)
T ss_pred cccccccHHHHHHHHHHhh
Confidence 799999999999887654
No 50
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.6e-67 Score=563.56 Aligned_cols=479 Identities=22% Similarity=0.300 Sum_probs=399.4
Q ss_pred CCHHHHHHHHHHh--cCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceE
Q 045072 14 LTPLGFLERAATV--YGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAIL 91 (556)
Q Consensus 14 ~t~~~~l~~~~~~--~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 91 (556)
.|+.++|.+++.. +||++|+... +.+||+||.++++++|.+|.+.|+++||+|+|+++|+++++++++||+++|+++
T Consensus 4 ~~~~~~~~~~a~~~~~pd~~a~~~~-~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~aG~~~ 82 (705)
T PRK06060 4 GNLAGLLAEQASEAGWYDRPAFYAA-DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLARGVMA 82 (705)
T ss_pred cCHHHHHHHHHhhccCCCceEEEec-CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEE
Confidence 3788999988876 7999999874 589999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccccc
Q 045072 92 NNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESL 171 (556)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (556)
+|++|.++.+++.+++++++++++|++.+....+... .++.. .+.
T Consensus 83 vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-----------~~~~~------------------------~~~ 127 (705)
T PRK06060 83 FLANPELHRDDHALAARNTEPALVVTSDALRDRFQPS-----------RVAEA------------------------AEL 127 (705)
T ss_pred EecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhccc-----------ccchh------------------------hhh
Confidence 9999999999999999999999999986543322110 00000 000
Q ss_pred cccCC-CCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhh-hhcCCCCCCEEEEecChhhhhhch-hhh
Q 045072 172 VTKGD-PNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSL-IDWSIPKQPVYLWTLPMFHANGWS-YPW 248 (556)
Q Consensus 172 ~~~~~-~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~pl~~~~g~~-~~~ 248 (556)
+.... .......+..++++++++|||||||.||||.++|+++..+..... ..+++.+.+++++..|++|..++. .++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 207 (705)
T PRK06060 128 MSEAARVAPGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGNSVW 207 (705)
T ss_pred hhhccccCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhHHHH
Confidence 00000 000001123567899999999999999999999999877665443 356788899999999999998875 467
Q ss_pred HhHhcCcEeEEec-CCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCCCCCCCCCeEEEEeCCCCcHHHHHHhHh-c-CC
Q 045072 249 GMAAVGGTNVCLR-KFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPRSEPLRNPVHILTAGAPPPAAVLFRTES-L-GF 325 (556)
Q Consensus 249 ~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~l~~v~~~g~~~~~~~~~~~~~-~-~~ 325 (556)
.++..|+++++.+ .+++..++..++++++|+++++|+++..+.+......++++|.+++||+++++++.+++.+ + ++
T Consensus 208 ~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~ 287 (705)
T PRK06060 208 FPLATGGSAVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCSPDSFRSLRCVVSAGEALELGLAERLMEFFGGI 287 (705)
T ss_pred HHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcccccccceeEEEEecCcCCHHHHHHHHHHcCCC
Confidence 7788999988876 4788999999999999999999999999987655556789999999999999999998874 4 58
Q ss_pred eEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCcccc
Q 045072 326 LVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLG 405 (556)
Q Consensus 326 ~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~g 405 (556)
++++.||+||++..+...... .....++|.|.+++ +++|+|+ ++.+++.| +.|||+|+|++++.|
T Consensus 288 ~~~~~YG~tE~~~~~~~~~~~-----------~~~~~~iG~p~~~~-~v~i~d~-~g~~~~~g--~~GEl~i~g~~v~~G 352 (705)
T PRK06060 288 PILDGIGSTEVGQTFVSNRVD-----------EWRLGTLGRVLPPY-EIRVVAP-DGTTAGPG--VEGDLWVRGPAIAKG 352 (705)
T ss_pred ceEeeeeccccCceEEeccCC-----------CCCcCcccccCCCc-EEEEECC-CCCCCCCC--CceEEEEccchhhhh
Confidence 999999999997654432110 11235789999999 9999998 68888887 689999999999999
Q ss_pred ccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCee
Q 045072 406 YLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGET 485 (556)
Q Consensus 406 y~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~ 485 (556)
|+++++.+. ..++||+|||+|++++||++++.||.+|+||++|++|++.+||..|.+++.|.+++|++.+++..++.
T Consensus 353 Y~~~~~~~~---~~~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~a~vv~~~~~~~~~~ 429 (705)
T PRK06060 353 YWNRPDSPV---ANEGWLDTRDRVCIDSDGWVTYRCRADDTEVIGGVNVDPREVERLIIEDEAVAEAAVVAVRESTGAST 429 (705)
T ss_pred hhCCCcccc---cCCCcEECCeeEEECCCceEEEecccCceEEECCEEECHHHHHHHHHhCCCeeEEEEEeecCccCCee
Confidence 999998653 34899999999999999999999999999999999999999999999999999999999998888888
Q ss_pred eEEEEEecccccC-CCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHH
Q 045072 486 PCAFLSLKAELEK-KPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAK 546 (556)
Q Consensus 486 ~~~~v~~~~~~~~-~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~ 546 (556)
++++|+..++... ....+++.++++++|+.|++|..++++++||+|++||++|++|++.+.
T Consensus 430 ~~a~vv~~~~~~~~~~~~~~i~~~l~~~L~~~~~P~~i~~v~~iP~t~~GKidr~~L~~~~~ 491 (705)
T PRK06060 430 LQAFLVATSGATIDGSVMRDLHRGLLNRLSAFKVPHRFAVVDRLPRTPNGKLVRGALRKQSP 491 (705)
T ss_pred EEEEEEeccccCcChHHHHHHHHHHHHhCCCCcCCcEEEEeecCCCCcchhhHHHHHHhhcc
Confidence 9999887654321 122467889999999999999999999999999999999999998753
No 51
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.8e-66 Score=541.42 Aligned_cols=522 Identities=25% Similarity=0.308 Sum_probs=422.4
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhcc
Q 045072 9 ANSSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTG 88 (556)
Q Consensus 9 ~~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (556)
++....++.++|.+.++.+|+++|++..++++||.||.+++.++|++|.+.|+++||+|+++++|+++++++++||+++|
T Consensus 5 ~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~G 84 (540)
T PRK06164 5 AAPRADTLASLLDAHARARPDAVALIDEDRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARLG 84 (540)
T ss_pred cccCCCCHHHHHHHHHHhCCCCeEEecCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHhC
Confidence 34556689999999999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred ceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhh-HHHHHhcCCC--CCCCCCeEEEcCCCCCCCCCCCccccCCCcc
Q 045072 89 AILNNINTRLDARTISVLLQHSESKLVLVDYQSRNL-VVEAISLFPS--DIKCPPLVLIADHTDHDNDNKSSQTVDSNFC 165 (556)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (556)
++++|+++..+.+++.+++++++++++|++.+.... +.+....... ......++.+.+..... +.. ..
T Consensus 85 ~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~---~~ 155 (540)
T PRK06164 85 ATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADAT------PAP---AP 155 (540)
T ss_pred cEEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccC------CCC---Cc
Confidence 999999999999999999999999999998765321 1111111110 00122333333111100 000 00
Q ss_pred cccccccccCCCC---CCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhh
Q 045072 166 CTYESLVTKGDPN---FKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHAN 242 (556)
Q Consensus 166 ~~~~~~~~~~~~~---~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~ 242 (556)
..+.+........ .........+++++++|||||||.||+|.++|.++..........+++..++++++.+|++|.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~~~~ 235 (540)
T PRK06164 156 GARVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDPGAVLLAALPFCGVF 235 (540)
T ss_pred ccccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEcCCchhHH
Confidence 0011111111000 0001123467899999999999999999999999988887777778889999999999999999
Q ss_pred hchhhhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcC-CCCCCCCCCeEEEEeC-CCCcHHHHHHh
Q 045072 243 GWSYPWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNL-PRSEPLRNPVHILTAG-APPPAAVLFRT 320 (556)
Q Consensus 243 g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~-~~~~~l~~l~~v~~~g-~~~~~~~~~~~ 320 (556)
|+..++.++..|+++++.+.+++..+++.++++++|+++++|+++..+.+. .....+++++.+..+| .+...+..+++
T Consensus 236 g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 315 (540)
T PRK06164 236 GFSTLLGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTAGERADFPSARLFGFASFAPALGELAALA 315 (540)
T ss_pred HHHHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhhcccCCCcceeeeeeccCCcchHHHHHHH
Confidence 998888999999999988889999999999999999999999999999876 3356678888887765 45666666776
Q ss_pred HhcCCeEEecccccccccceeeccccccccCCChhhhccccccCcccc-ceeeeeEEecCCCCceecCCCCeeeEEEEec
Q 045072 321 ESLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRT-VCFTEIDVIDSESGLSVSHDGASLGEIVFRG 399 (556)
Q Consensus 321 ~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~ 399 (556)
...++++++.||+||++.++........ ......+.|.+. +++ .++|+|++++.+++.+ +.|||+++|
T Consensus 316 ~~~~~~~~~~YG~tE~~~~~~~~~~~~~--------~~~~~~~~g~~~~~~~-~~~i~d~~~~~~~~~g--~~Gel~v~g 384 (540)
T PRK06164 316 RARGVPLTGLYGSSEVQALVALQPATDP--------VSVRIEGGGRPASPEA-RVRARDPQDGALLPDG--ESGEIEIRA 384 (540)
T ss_pred hhcCCceecceeeccccceeeccCCCCC--------CcceeccCccccCCCe-EEEEecCCCCcCCCCC--CeeEEEEec
Confidence 6668999999999999876544321110 111123557765 555 9999998889999888 789999999
Q ss_pred CCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecC
Q 045072 400 GSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPD 479 (556)
Q Consensus 400 ~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~ 479 (556)
++++.||+++++.+...|..++||+|||+|++++||.+++.||.+|+|+.+|.+|+|.+||+.+.++++|.+++|++.+.
T Consensus 385 ~~~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~~~~v~~~~v~~~~~ 464 (540)
T PRK06164 385 PSLMRGYLDNPDATARALTDDGYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAEIEHALEALPGVAAAQVVGATR 464 (540)
T ss_pred ccccccccCCchhhhhcccCCCceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHHHHHHHHhCCCceeEEEEecCC
Confidence 99999999999999999988999999999999999999999999999999999999999999999999999999999884
Q ss_pred CCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCC---CccHHHHHHHHHHhccccc
Q 045072 480 EFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTG---KIKKFELREMAKAMGKSKV 553 (556)
Q Consensus 480 ~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~G---Kv~r~~l~~~~~~~~~~~~ 553 (556)
..+..++++++..++.. .+.+++.++++++++++++|..+++++++|+|++| |++|++|++++++....+.
T Consensus 465 -~~~~~~~~~vv~~~~~~--~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~g~~~Ki~r~~L~~~~~~~~~~~~ 538 (540)
T PRK06164 465 -DGKTVPVAFVIPTDGAS--PDEAGLMAACREALAGFKVPARVQVVEAFPVTESANGAKIQKHRLREMAQARLAAER 538 (540)
T ss_pred -CCceeEEEEEEeCCCCC--CCHHHHHHHHHhhcccCcCCcEEEEecCCCCCCCCccccccHHHHHHHHHHhhhhhc
Confidence 34567888888876544 67889999999999999999999999999999998 9999999999887766543
No 52
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.8e-67 Score=556.42 Aligned_cols=509 Identities=22% Similarity=0.257 Sum_probs=404.7
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCCEEEECC---------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHH
Q 045072 9 ANSSPLTPLGFLERAATVYGDCPSIIYNN---------LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYE 79 (556)
Q Consensus 9 ~~~~~~t~~~~l~~~~~~~p~~~a~~~~~---------~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~ 79 (556)
......|+.+.|+++++.+|+++|+++.+ +.+||+||.++++++|++|.+. +++||+|+++++|++++++
T Consensus 16 ~~~~~~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~ 94 (631)
T PRK07769 16 RFPPNTNLVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLI 94 (631)
T ss_pred cccccCCHHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHH
Confidence 34455789999999999999999998732 5799999999999999999987 8999999999999999999
Q ss_pred HHHHhhhccceEecc-CCCCC--HHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCC
Q 045072 80 AHFAIPFTGAILNNI-NTRLD--ARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKS 156 (556)
Q Consensus 80 ~~lA~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (556)
++|||+++|++++|+ ++..+ .+++.+++++++++++|++.+..+.+.......+... .+.++..+....
T Consensus 95 ~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------- 166 (631)
T PRK07769 95 AFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKE-RPRVIAVDAVPD------- 166 (631)
T ss_pred HHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccc-cceEEEcccccc-------
Confidence 999999999999999 55554 6889999999999999998876655544433222100 122322211000
Q ss_pred ccccCCCcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEec
Q 045072 157 SQTVDSNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTL 236 (556)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (556)
.... .. ...+..++++++++|||||||.||||.++|+++..+.......+++..+++++..+
T Consensus 167 --------------~~~~---~~-~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~ 228 (631)
T PRK07769 167 --------------EVGA---TW-VPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVSWL 228 (631)
T ss_pred --------------cccc---cc-CCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCCcceEEEeC
Confidence 0000 00 01124567999999999999999999999999988777776777888999999999
Q ss_pred ChhhhhhchhhhHhHhcCcEeEEecC--C--CHHHHHHHHHHhCC---cEEechhHHHHHHHcC---CC----CCCCCCC
Q 045072 237 PMFHANGWSYPWGMAAVGGTNVCLRK--F--DAAVIYKMIRQHGV---THMCGAPVVLNMISNL---PR----SEPLRNP 302 (556)
Q Consensus 237 pl~~~~g~~~~~~~~~~g~~~~~~~~--~--~~~~~~~~i~~~~~---t~~~~~p~~~~~l~~~---~~----~~~l~~l 302 (556)
|++|.+|+...+.+++.|++++++++ + ++..+++.+.++++ +.+..+|.++..+... .. ...++++
T Consensus 229 Pl~h~~gl~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~l 308 (631)
T PRK07769 229 PFFHDMGLITVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNV 308 (631)
T ss_pred CCcCchhhHHHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhhe
Confidence 99999999887888888999888753 3 88999999999986 7899999887766542 11 2357899
Q ss_pred eEEEEeCCCCcHHHHHHhHh-c---CC---eEEecccccccccceeeccccccccC---------------CCh-hhhcc
Q 045072 303 VHILTAGAPPPAAVLFRTES-L---GF---LVSHGYGLTETAGLVVSCAWKNKWNR---------------LPA-TERAR 359 (556)
Q Consensus 303 ~~v~~~g~~~~~~~~~~~~~-~---~~---~l~~~yG~tE~~~~~~~~~~~~~~~~---------------~~~-~~~~~ 359 (556)
|.+++||++++++..+++.+ + |+ .+++.||+||++.+++.......... ... .....
T Consensus 309 r~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 388 (631)
T PRK07769 309 KGLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAV 388 (631)
T ss_pred eeEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCce
Confidence 99999999999999988874 3 33 59999999999766554322111000 000 00011
Q ss_pred ccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccCCCCccccCcC-----------------CCCc
Q 045072 360 MKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMK-----------------DDGW 422 (556)
Q Consensus 360 ~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~-----------------~~~~ 422 (556)
...++|.+.++. .++|+|++++.+++.| +.|||+++||+++.|||++++.+...|. .+||
T Consensus 389 ~~~s~G~~~~~~-~~~ivd~~~g~~~~~g--e~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw 465 (631)
T PRK07769 389 AQVSAGKVGVSE-WAVIVDPETASELPDG--QIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALW 465 (631)
T ss_pred eEEeCCCcCCCc-EEEEEcCCCCcCCCCC--CEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCe
Confidence 224789999998 9999998789999888 7899999999999999999998877764 2489
Q ss_pred eecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhc-CCCccc--cEEEeecC-------------------C
Q 045072 423 FYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYT-NPAVNE--AAVVARPD-------------------E 480 (556)
Q Consensus 423 ~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~-~~~i~~--~~v~~~~~-------------------~ 480 (556)
|+|||+|+++ ||++++.||.+|+||.+|++|+|.|||..|.+ ||.|.+ ++|+++++ +
T Consensus 466 ~~TGDlg~~~-dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~~p~v~~~~~av~~v~d~~~~~~~~~~~~~~~~~~~~ 544 (631)
T PRK07769 466 VRTGDYGVYF-DGELYITGRVKDLVIIDGRNHYPQDLEYTAQEATKALRTGYVAAFSVPANQLPQVVFDDSHAGLKFDPE 544 (631)
T ss_pred eeccccccEE-CCEEEEEcccccEEEECCeeeCHHHHHHHHHhccccccCCcEEEEEecccccccccccccccccccccC
Confidence 9999999995 99999999999999999999999999999996 899998 89998887 5
Q ss_pred CCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCC-Cc-ccceeEEec--CCCCCCCCCccHHHHHHHHHHhc
Q 045072 481 FWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPR-YM-VPKTVVFKE--ELPKTSTGKIKKFELREMAKAMG 549 (556)
Q Consensus 481 ~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~-~~-~p~~~~~v~--~lP~t~~GKv~r~~l~~~~~~~~ 549 (556)
.+|+.++++|++.++.. ..+.++|.+++++++.. ++ .|..+.+++ +||+|++||++|++|++.+.+..
T Consensus 545 ~~ge~~~a~v~~~~~~~-~~~~~~l~~~~~~~l~~~~~~~p~~~~~v~~~~lP~t~~GKi~r~~l~~~~~~~~ 616 (631)
T PRK07769 545 DTSEQLVIVAERAPGAH-KLDPQPIADDIRAAIAVRHGVTVRDVLLVPAGSIPRTSSGKIARRACRAAYLDGS 616 (631)
T ss_pred CCCccEEEEEEecCccc-cccHHHHHHHHHHHHHHHcCCCccEEEEECCCccccCCCcHHHHHHHHHHHHcCC
Confidence 57888999998877532 15678999999999885 56 478888887 69999999999999999887543
No 53
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=3.2e-66 Score=544.52 Aligned_cols=519 Identities=28% Similarity=0.460 Sum_probs=425.0
Q ss_pred cCCCCCCCCCHHHHHHHHHHhcCCCCEEEE--CCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHH
Q 045072 6 PCTANSSPLTPLGFLERAATVYGDCPSIIY--NNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFA 83 (556)
Q Consensus 6 ~~~~~~~~~t~~~~l~~~~~~~p~~~a~~~--~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA 83 (556)
+.-.+....++.++|.+.++.+|+++|+++ .++.+||+||.++++++|.+|.+.|+++||+|+++++|++++++++||
T Consensus 8 ~~~~~~~~~~l~~~l~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la 87 (559)
T PRK08315 8 PTDVPLLEQTIGQLLDRTAARYPDREALVYRDQGLRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFA 87 (559)
T ss_pred CCcCChhhccHHHHHHHHHHHCCCCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHH
Confidence 344566777999999999999999999988 457899999999999999999999999999999999999999999999
Q ss_pred hhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchh-----hHHHHHhcCC--------CCC--CCCCeEEEcCCC
Q 045072 84 IPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRN-----LVVEAISLFP--------SDI--KCPPLVLIADHT 148 (556)
Q Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-----~~~~~~~~~~--------~~~--~~~~~~~~~~~~ 148 (556)
|+++|++++|++|.++.+++..+++.+++++++++.+... .+.+....+. ... ....++......
T Consensus 88 ~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (559)
T PRK08315 88 TAKIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDEK 167 (559)
T ss_pred HHHhCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecccC
Confidence 9999999999999999999999999999999999875432 1222111110 000 011122221110
Q ss_pred CCCCCCCCccccCCCcccccccccccCCCC-----CCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhh
Q 045072 149 DHDNDNKSSQTVDSNFCCTYESLVTKGDPN-----FKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLID 223 (556)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~ 223 (556)
......+.++....... .........+++++++|||||||.||+|.++|.++..++......
T Consensus 168 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~ 234 (559)
T PRK08315 168 -------------HPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEA 234 (559)
T ss_pred -------------CcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHh
Confidence 01112222222211000 011112456789999999999999999999999998888877777
Q ss_pred cCCCCCCEEEEecChhhhhhchh-hhHhHhcCcEeEEec-CCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCC
Q 045072 224 WSIPKQPVYLWTLPMFHANGWSY-PWGMAAVGGTNVCLR-KFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPL 299 (556)
Q Consensus 224 ~~~~~~~~~~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l 299 (556)
+++.++|+++...|++|..++.. ++.++..|+++++.. .+++..+++.++++++|+++++|+++..+..... ...+
T Consensus 235 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~ 314 (559)
T PRK08315 235 MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDL 314 (559)
T ss_pred cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCc
Confidence 88999999999999999998765 567777888887444 6899999999999999999999999988876553 3457
Q ss_pred CCCeEEEEeCCCCcHHHHHHhH-hcCC-eEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEe
Q 045072 300 RNPVHILTAGAPPPAAVLFRTE-SLGF-LVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVI 377 (556)
Q Consensus 300 ~~l~~v~~~g~~~~~~~~~~~~-~~~~-~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~ 377 (556)
+++|.++++|++++..+.+.+. .++. .+++.||+||++.+++....... ......++|.|+++. +++|+
T Consensus 315 ~~lr~~~~~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~--------~~~~~~~vG~p~~~~-~v~i~ 385 (559)
T PRK08315 315 SSLRTGIMAGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDP--------LEKRVTTVGRALPHL-EVKIV 385 (559)
T ss_pred hhhheeEecCCCCCHHHHHHHHHHcCCcceeEEEcccccccceeecCcccc--------hhhccCCCCccCCCc-EEEEE
Confidence 8999999999999999988877 5555 49999999999876654432111 112246889999998 99999
Q ss_pred cCCCCceecCCCCeeeEEEEecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChH
Q 045072 378 DSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSV 457 (556)
Q Consensus 378 d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~ 457 (556)
|++++.+++.+ +.|||+++|++++.||++++..+...+..++||+|||+|++++||.+++.||.+|+++.+|++|++.
T Consensus 386 d~~~~~~~~~g--~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~ 463 (559)
T PRK08315 386 DPETGETVPRG--EQGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPR 463 (559)
T ss_pred cCccCCcCCCC--CceEEEEECchhhhhhcCChhHHhhcCCCCCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHH
Confidence 99779999888 6899999999999999999998888886689999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCcc
Q 045072 458 EVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIK 537 (556)
Q Consensus 458 ~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~ 537 (556)
+||++|.++++|.+++|++.+++..|+.++++|+..++.. ...+++.++++++++.|++|..++++++||+|++||++
T Consensus 464 eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GK~~ 541 (559)
T PRK08315 464 EIEEFLYTHPKIQDVQVVGVPDEKYGEEVCAWIILRPGAT--LTEEDVRDFCRGKIAHYKIPRYIRFVDEFPMTVTGKIQ 541 (559)
T ss_pred HHHHHHHhCCCceEEEEEecCCCCCCeEEEEEEEeCCCCC--CCHHHHHHHHHhhcccccCCcEEEEcccCCCCCCCcee
Confidence 9999999999999999999998877888888888766543 56789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcc
Q 045072 538 KFELREMAKAMGK 550 (556)
Q Consensus 538 r~~l~~~~~~~~~ 550 (556)
|.+|++++.++..
T Consensus 542 r~~L~~~~~~~~~ 554 (559)
T PRK08315 542 KFKMREMMIEELG 554 (559)
T ss_pred HHHHHHHHHhhhc
Confidence 9999999877544
No 54
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=5.3e-66 Score=536.37 Aligned_cols=496 Identities=26% Similarity=0.373 Sum_probs=421.1
Q ss_pred CCCHHHHHHHHHHhcCCCCEEEE-CCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceE
Q 045072 13 PLTPLGFLERAATVYGDCPSIIY-NNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAIL 91 (556)
Q Consensus 13 ~~t~~~~l~~~~~~~p~~~a~~~-~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 91 (556)
..++.+++.+++ .+|+++|+.+ .++.+||.||.++++++|.+|++.|+++||+|+++++|+++++++++||+++|+++
T Consensus 2 ~~~l~~~~~~~~-~~~~~~a~~~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~~ 80 (504)
T PRK07514 2 NNNLFDALRAAF-ADRDAPFIETPDGLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAGAVF 80 (504)
T ss_pred CccHHHHHHHHh-hCCCCeEEEeCCCCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEE
Confidence 468899999999 9999999988 56789999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccccc
Q 045072 92 NNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESL 171 (556)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (556)
+|+++.++.+++.++++.++++++++++...+.+........ ...++....... ..+.+.
T Consensus 81 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~----------------~~~~~~ 140 (504)
T PRK07514 81 LPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAAG----APHVETLDADGT----------------GSLLEA 140 (504)
T ss_pred EECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhccC----CceEEEecCCCc----------------ccHHHh
Confidence 999999999999999999999999999887766554433221 222333322110 011111
Q ss_pred cccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchh-hhHh
Q 045072 172 VTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSY-PWGM 250 (556)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~-~~~~ 250 (556)
....... ........+++++++|||||||.||+|.++|+++...+......+++..+|++++.+|++|..++.. .+.+
T Consensus 141 ~~~~~~~-~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~ 219 (504)
T PRK07514 141 AAAAPDD-FETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATNVA 219 (504)
T ss_pred hhhcCcc-cCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHHHH
Confidence 1111111 1112345789999999999999999999999999988777777778899999999999999998765 5678
Q ss_pred HhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHHHHhH-hcCCeE
Q 045072 251 AAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVLFRTE-SLGFLV 327 (556)
Q Consensus 251 ~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~~~~~-~~~~~l 327 (556)
+..|+++++.+..++..+++.+. ++|.+.++|.++..++.... ...++++|.+++||+++++++.+.+. .++.++
T Consensus 220 l~~G~~~~~~~~~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~ 297 (504)
T PRK07514 220 LLAGASMIFLPKFDPDAVLALMP--RATVMMGVPTFYTRLLQEPRLTREAAAHMRLFISGSAPLLAETHREFQERTGHAI 297 (504)
T ss_pred HhcCcEEEECCCCCHHHHHHHHH--hheeeecHHHHHHHHHcCCCCCcccccceeeEEecCCCCCHHHHHHHHHHhCCcc
Confidence 88999999888889999999994 79999999999999987654 45577899999999999999999888 568899
Q ss_pred EecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCcccccc
Q 045072 328 SHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYL 407 (556)
Q Consensus 328 ~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~ 407 (556)
++.||+||++....... .......+.|.|.++. +++|+|++++.+++.+ +.|||+++|++++.||+
T Consensus 298 ~~~YG~tE~~~~~~~~~-----------~~~~~~~~~G~~~~~~-~v~i~d~~~~~~~~~g--~~Gel~i~~~~~~~gy~ 363 (504)
T PRK07514 298 LERYGMTETNMNTSNPY-----------DGERRAGTVGFPLPGV-SLRVTDPETGAELPPG--EIGMIEVKGPNVFKGYW 363 (504)
T ss_pred eeecccccccccccCCc-----------cccccCcccccCCCCc-EEEEEECCCCCCCCCC--CceEEEEecCCcccccc
Confidence 99999999875443211 1112235789999998 9999997789999888 68999999999999999
Q ss_pred CCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeE
Q 045072 408 KDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPC 487 (556)
Q Consensus 408 ~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~ 487 (556)
++++.+...|..++||+|||+++++++|.+++.||.+|+|+.+|.+|+|.+||..+.++++|.+++|++.+++..|+.++
T Consensus 364 ~~~~~~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~ 443 (504)
T PRK07514 364 RMPEKTAEEFRADGFFITGDLGKIDERGYVHIVGRGKDLIISGGYNVYPKEVEGEIDELPGVVESAVIGVPHPDFGEGVT 443 (504)
T ss_pred CCchhhhhhcccCCCeeecceEEEcCCccEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEeCCCCCcCceEE
Confidence 99999998898899999999999999999999999999999999999999999999999999999999999887788889
Q ss_pred EEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHh
Q 045072 488 AFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAM 548 (556)
Q Consensus 488 ~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 548 (556)
++++..++.. .+.+++.+.++++++++++|..+++++++|+|++||++|++|++++.+.
T Consensus 444 ~~~~~~~~~~--~~~~~l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gK~~r~~l~~~~~~~ 502 (504)
T PRK07514 444 AVVVPKPGAA--LDEAAILAALKGRLARFKQPKRVFFVDELPRNTMGKVQKNLLREQYADL 502 (504)
T ss_pred EEEEECCCCC--CCHHHHHHHHHhhcccCCCCcEEEEeccCCCCCCcceeHHHHHHHHHhh
Confidence 9988876543 5678999999999999999999999999999999999999999998764
No 55
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=5.7e-66 Score=539.27 Aligned_cols=496 Identities=30% Similarity=0.447 Sum_probs=411.3
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEEC------CccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHh
Q 045072 11 SSPLTPLGFLERAATVYGDCPSIIYN------NLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAI 84 (556)
Q Consensus 11 ~~~~t~~~~l~~~~~~~p~~~a~~~~------~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~ 84 (556)
+.+.++.+.+.+.++.+|+++|+++. ++.+||+||.++++++|.+|++.|+++|++|+++++|+++++++++||
T Consensus 19 ~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~ 98 (538)
T TIGR03208 19 WRDRTINDHFDAAVANCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLAC 98 (538)
T ss_pred cccCcHHHHHHHHHHHCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 34568999999999999999999862 368999999999999999999999999999999999999999999999
Q ss_pred hhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchh-----hHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccc
Q 045072 85 PFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRN-----LVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQT 159 (556)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (556)
+++|++++|++|..+.+++.++++.++++++++++.... .........+. ...++..+....
T Consensus 99 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---------- 165 (538)
T TIGR03208 99 ARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPA---LRQVVVIDGDGD---------- 165 (538)
T ss_pred HhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCc---ceEEEEecCCCC----------
Confidence 999999999999999999999999999999999876421 11222222211 223333322110
Q ss_pred cCCCcccccccccccCC----CC---CCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEE
Q 045072 160 VDSNFCCTYESLVTKGD----PN---FKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVY 232 (556)
Q Consensus 160 ~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~ 232 (556)
..++..+.... .. .....+..++++++++|||||||.||+|.++|++++..+......++++.++++
T Consensus 166 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~ 239 (538)
T TIGR03208 166 ------DSFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGGGDVI 239 (538)
T ss_pred ------cCHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCCCCeE
Confidence 11111111000 00 000112456899999999999999999999999998888777777788899999
Q ss_pred EEecChhhhhhchh-hhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeC
Q 045072 233 LWTLPMFHANGWSY-PWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAG 309 (556)
Q Consensus 233 ~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g 309 (556)
++.+|++|..++.. ++.++..|+++++...+++..+++.++++++|++.++|.++..+..... ...++++|.++++|
T Consensus 240 l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gG 319 (538)
T TIGR03208 240 LMASPMAHQTGFMYGLMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLCAG 319 (538)
T ss_pred EEeCCchhHHHHHHHHHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEEcC
Confidence 99999999988754 6778889999888888899999999999999999999999998876543 34678999999999
Q ss_pred CCCcHHHHHHhH-hcCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCC
Q 045072 310 APPPAAVLFRTE-SLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHD 388 (556)
Q Consensus 310 ~~~~~~~~~~~~-~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~ 388 (556)
+++++++.+++. .+++.+++.||+||++.++....... ......++|.+.+++ +++|+|+ ++.+++.+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~---------~~~~~~~~G~~~~g~-~v~i~~~-~~~~~~~g 388 (538)
T TIGR03208 320 APIPGILVERAWELLGALIVSAWGMTENGAVTVTEPDDA---------LEKASTTDGRPLPGV-EVKVIDA-NGAKLSQG 388 (538)
T ss_pred CCCCHHHHHHHHHHcCCeEEeeeccCcCCCccccCcccc---------hhhccCcccccCCCC-EEEEECC-CCCCCcCC
Confidence 999999999887 57899999999999987654432110 111234689999998 9999997 68888877
Q ss_pred CCeeeEEEEecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCC
Q 045072 389 GASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPA 468 (556)
Q Consensus 389 ~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~ 468 (556)
+.|||+++|+.++.||+++++.+. +..+|||+|||+|+++++|.+++.||.+|+|+.+|++|+|.+||.+|.++|+
T Consensus 389 --~~Gel~v~g~~~~~gy~~~~~~~~--~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~ 464 (538)
T TIGR03208 389 --ETGRLLVRGCSNFGGYLKRPHLNS--TDAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVEIENLLYQHPA 464 (538)
T ss_pred --CCcEEEEecCcccccccCCccccc--ccCCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHHHHHHHhcCcc
Confidence 679999999999999999998764 3458999999999999999999999999999999999999999999999999
Q ss_pred ccccEEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHh-cCCCCcccceeEEecCCCCCCCCCccHHHHH
Q 045072 469 VNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRA-RLPRYMVPKTVVFKEELPKTSTGKIKKFELR 542 (556)
Q Consensus 469 i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~-~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~ 542 (556)
|.+++|++.+++..|+.++++++...+.. .+.+++.+++++ +++.+++|..+++++++|+|++||++|++|+
T Consensus 465 v~~~~v~~~~~~~~g~~~~a~v~~~~~~~--~~~~~l~~~~~~~~l~~~~~P~~i~~v~~iP~t~~gKv~r~~L~ 537 (538)
T TIGR03208 465 VAQVAIVAYPDERLGERACAVVVPKPGCT--LDFAAMVAFLKAQKVALQYIPERLEVVDALPATPAGKIQKFRLR 537 (538)
T ss_pred eeeEEEEeccCCCCCceEEEEEEECCCCC--CCHHHHHHHHHhcchhhccCCcEEEEeccCCCCCccccchHhhc
Confidence 99999999998888889999998876543 567889999985 7999999999999999999999999999986
No 56
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=5.6e-66 Score=537.82 Aligned_cols=500 Identities=25% Similarity=0.350 Sum_probs=421.0
Q ss_pred CHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEecc
Q 045072 15 TPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNI 94 (556)
Q Consensus 15 t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 94 (556)
++.+.|.+.++.+|+++|+.+.++++||+||.+++.++|.+|++.|+.+||+|+++++|+++++++++||+++|++++|+
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 80 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVHHDRTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFVPI 80 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEEeC
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCccccccccccc
Q 045072 95 NTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESLVTK 174 (556)
Q Consensus 95 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (556)
++..+.+++.++++.+++++++++.+..+.+........ ....++.+.+....... ......++++...
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 149 (515)
T TIGR03098 81 NPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCH---DLRTLILVGEPAHASEG--------GGESPSWPKLLAL 149 (515)
T ss_pred CCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhccc---ccceEEEecCcccccCC--------ccccccHHHhhcc
Confidence 999999999999999999999998877665554433322 12334444432211000 1111233333332
Q ss_pred CCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchhhhHhHhcC
Q 045072 175 GDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVG 254 (556)
Q Consensus 175 ~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g 254 (556)
.... ...+...+++++++|||||||.||+|.++|.++..+.......+.+..+|++++.+|++|.+++..++.++..|
T Consensus 150 ~~~~--~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G 227 (515)
T TIGR03098 150 GDAD--PPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDYGFNQLTTAFYVG 227 (515)
T ss_pred cccc--ccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHhHHHHHHHHHHcC
Confidence 2211 11223467899999999999999999999999988877777777888999999999999999998889999999
Q ss_pred cEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC-CCCCCCCeEEEEeCCCCcHHHHHHhHh-c-CCeEEecc
Q 045072 255 GTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR-SEPLRNPVHILTAGAPPPAAVLFRTES-L-GFLVSHGY 331 (556)
Q Consensus 255 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~-~~~l~~l~~v~~~g~~~~~~~~~~~~~-~-~~~l~~~y 331 (556)
+++++.+.+++..+++.++++++|++.++|+++..+.+... ...+.++|.++++|+++++++.+.+.+ + +..+++.|
T Consensus 228 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~Y 307 (515)
T TIGR03098 228 ATVVLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDWPESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMY 307 (515)
T ss_pred CEEEEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhcccCCCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeee
Confidence 99998888999999999999999999999999999987543 346778999999999999999999884 4 78899999
Q ss_pred cccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccCCCC
Q 045072 332 GLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPN 411 (556)
Q Consensus 332 G~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~ 411 (556)
|+||++....... .......+++|.+.+++ +++|+|+ ++.+++.+ +.|||+++|+.++.||++++.
T Consensus 308 G~tE~~~~~~~~~----------~~~~~~~~~vG~~~~~~-~~~i~~~-~~~~~~~~--~~Gel~v~g~~~~~gy~~~~~ 373 (515)
T TIGR03098 308 GLTEAFRSTYLPP----------EEVDRRPDSIGKAIPNA-EVLVLRE-DGSECAPG--EEGELVHRGALVAMGYWNDPE 373 (515)
T ss_pred ccccccceEeccc----------ccccCCCCCcceecCCC-EEEEECC-CCCCCCCC--CceEEEEcCchhhccccCCch
Confidence 9999875443211 11122346899999999 9999997 78888777 689999999999999999998
Q ss_pred ccccCcCC-----------CCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCC
Q 045072 412 GTRKCMKD-----------DGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDE 480 (556)
Q Consensus 412 ~~~~~~~~-----------~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~ 480 (556)
.+...|.. ++||+|||+|++++||++++.||.+|+|+.+|.+|+|.+||+++.++|.|.+++|++.+++
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~ 453 (515)
T TIGR03098 374 KTAERFRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTEVEEVAYATGLVAEAVAFGVPDP 453 (515)
T ss_pred hhhhhhhccCCccccccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHHHHHHHHhcCCCeeEEEEEeccCc
Confidence 77655542 3489999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHH
Q 045072 481 FWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELRE 543 (556)
Q Consensus 481 ~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~ 543 (556)
..|+.++++++..+... .+.+++.++++++++++++|..++++++||+|.+||++|++|++
T Consensus 454 ~~g~~~~~~~~~~~~~~--~~~~~l~~~l~~~l~~~~~p~~i~~v~~iP~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 454 TLGQAIVLVVTPPGGEE--LDRAALLAECRARLPNYMVPALIHVRQALPRNANGKIDRKALAA 514 (515)
T ss_pred ccCceEEEEEEeCCCCC--CCHHHHHHHHHhhCccccCCCEEEEeccCCCCCCCCCcHHHhcc
Confidence 88999988887655433 57889999999999999999999999999999999999999964
No 57
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.2e-66 Score=537.26 Aligned_cols=490 Identities=23% Similarity=0.285 Sum_probs=403.9
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCChHHHHHHHHHhhhccc
Q 045072 11 SSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSI-GITRGHVVSVVAPNIPAMYEAHFAIPFTGA 89 (556)
Q Consensus 11 ~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~-g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (556)
.++.++.++|.+.+. ++++++.+.++.+||.||.++++++|.+|++. |+++|++|+++++|+++++++++||+++|+
T Consensus 2 ~~~~~~~~~l~~~a~--~~~~a~~~~~~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~G~ 79 (529)
T PRK07867 2 SSAPTVAELLLPLAE--DDDRGLYFEDSFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALSGI 79 (529)
T ss_pred CccccHHHHHHHhcc--cCCceEEECCcEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhcCC
Confidence 345689999988875 79999999999999999999999999999997 899999999999999999999999999999
Q ss_pred eEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccc
Q 045072 90 ILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYE 169 (556)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (556)
+++|+++.++.+++.++++.++++++|++++..+.+.... . ...++.... ..+.
T Consensus 80 ~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~---~----~~~~~~~~~-------------------~~~~ 133 (529)
T PRK07867 80 VPVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLD---P----GVRVINVDS-------------------PAWA 133 (529)
T ss_pred EEEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhc---c----CceEEEecc-------------------ccHH
Confidence 9999999999999999999999999999987765443321 0 111221111 1122
Q ss_pred cccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchh-hh
Q 045072 170 SLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSY-PW 248 (556)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~-~~ 248 (556)
+.+..............++++++++|||||||.||+|+++|+++..+.......+++..+|+++..+|++|..++.. ++
T Consensus 134 ~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~ 213 (529)
T PRK07867 134 DELAAHRDAEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAGWA 213 (529)
T ss_pred HHhcccCCCCCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHHHH
Confidence 22221111111112346789999999999999999999999999887777777778899999999999999998866 45
Q ss_pred HhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHHHHhHhcCCe
Q 045072 249 GMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVLFRTESLGFL 326 (556)
Q Consensus 249 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~~~~~~~~~~ 326 (556)
.++..|+++++.+.+++..+++.++++++|++.++|+.+..++.... .....++| +++||+.+++......+.++++
T Consensus 214 ~~l~~G~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~~~~lr-~~~gg~~~~~~~~~~~~~~g~~ 292 (529)
T PRK07867 214 VALAAGASIALRRKFSASGFLPDVRRYGATYANYVGKPLSYVLATPERPDDADNPLR-IVYGNEGAPGDIARFARRFGCV 292 (529)
T ss_pred HHHhcCceEEecCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcccccccceE-EEecCCCChHHHHHHHHHhCCc
Confidence 56778888888778899999999999999999999999999887654 12234566 5568888877654444477999
Q ss_pred EEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCC----------CeeeEEE
Q 045072 327 VSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDG----------ASLGEIV 396 (556)
Q Consensus 327 l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~----------~~~Gel~ 396 (556)
+++.||+||++..+.... ....+++|.+.++ ++|+|++++.+++.+. ...|||+
T Consensus 293 l~~~YG~TE~~~~~~~~~-------------~~~~~~~g~~~~~---~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~ 356 (529)
T PRK07867 293 VVDGFGSTEGGVAITRTP-------------DTPPGALGPLPPG---VAIVDPDTGTECPPAEDADGRLLNADEAIGELV 356 (529)
T ss_pred EEEeecccccccccccCC-------------CCCCCCcCCCCCC---EEEEECCCCCCCCCCccccccccccCCcceEEE
Confidence 999999999975543211 0123467888887 5778866777777762 1179999
Q ss_pred E-ecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEE
Q 045072 397 F-RGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVV 475 (556)
Q Consensus 397 i-~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~ 475 (556)
+ +|++++.||+++++.+...+. +|||+|||+|+++++|++++.||.+|+|+.+|++|+|.+||++|.++|+|.+++|+
T Consensus 357 i~~g~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~V~ 435 (529)
T PRK07867 357 NTAGPGGFEGYYNDPEADAERMR-GGVYWSGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAPIERILLRYPDATEVAVY 435 (529)
T ss_pred EecCCcccccccCChHhhhhhhc-CCeEeeccEEEEeCCCcEEEeccccCeEEECCEEeCHHHHHHHHHhCCCeeEEEEE
Confidence 9 999999999999998888887 89999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhc--CCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHh
Q 045072 476 ARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRAR--LPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAM 548 (556)
Q Consensus 476 ~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~--l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 548 (556)
+.+++..|+.++++++..++.. .+.+++.+.++++ ++++++|..++++++||+|++||++|++|+++....
T Consensus 436 g~~~~~~g~~~~a~vv~~~~~~--~~~~~l~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKv~r~~L~~~~~~~ 508 (529)
T PRK07867 436 AVPDPVVGDQVMAALVLAPGAK--FDPDAFAEFLAAQPDLGPKQWPSYVRVCAELPRTATFKVLKRQLSAEGVDC 508 (529)
T ss_pred eccCCCCCeeEEEEEEECCCCC--CCHHHHHHHHHhhccCCcccCCeEEEEeeccCCCCCcceeHHHHHHhcCCC
Confidence 9999988999999998876644 6788899999865 999999999999999999999999999999987553
No 58
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.6e-66 Score=542.60 Aligned_cols=528 Identities=27% Similarity=0.429 Sum_probs=423.8
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCCEEEECC---ccccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCChHHHHHHHHH
Q 045072 8 TANSSPLTPLGFLERAATVYGDCPSIIYNN---LIYTWSQTHRRCLQLASSLSS-IGITRGHVVSVVAPNIPAMYEAHFA 83 (556)
Q Consensus 8 ~~~~~~~t~~~~l~~~~~~~p~~~a~~~~~---~~~Ty~~l~~~~~~la~~L~~-~g~~~gd~V~i~~~~~~~~~~~~lA 83 (556)
.....|.|+.++|++++..+|++.|+++.+ +.+||.||.+++.++|.+|.+ .|+++||+|+++++|+++++++++|
T Consensus 4 ~~~~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA 83 (576)
T PRK05620 4 TMQDVPLSLTRILEYGSTVHGDTTVTTWGGAEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFA 83 (576)
T ss_pred hhhcCCCcHHHHHHHHHHhCCCceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 345667899999999999999999998754 789999999999999999997 7999999999999999999999999
Q ss_pred hhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCC
Q 045072 84 IPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSN 163 (556)
Q Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (556)
|+++|+++++++|.++.+++.++++.++++++|++....+.+.+.....+. ...++..+..... ..........
T Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~---~~~~~~~~~~ 157 (576)
T PRK05620 84 VACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPC---VRAVVFIGPSDAD---SAAAHMPEGI 157 (576)
T ss_pred HHhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCcc---ccEEEEecCcccc---cchhcccccc
Confidence 999999999999999999999999999999999998877766665544332 2233333322110 0000111111
Q ss_pred cccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhh--hhhcCCCCCCEEEEecChhhh
Q 045072 164 FCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDS--LIDWSIPKQPVYLWTLPMFHA 241 (556)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~pl~~~ 241 (556)
...++.+++......... ....++++++++|||||||.||+|.++|+++....... ...+.+..++++++.+|++|.
T Consensus 158 ~~~~~~~l~~~~~~~~~~-~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~ 236 (576)
T PRK05620 158 KVYSYEALLDGRSTVYDW-PELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIYHV 236 (576)
T ss_pred ccccHHHHhhcCCCcCCC-CCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChHHh
Confidence 223455555433222221 22456899999999999999999999999986544332 234678889999999999999
Q ss_pred hhchhhhHhHhcCcEeEEec-CCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHHH
Q 045072 242 NGWSYPWGMAAVGGTNVCLR-KFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVLF 318 (556)
Q Consensus 242 ~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~~ 318 (556)
+++...+.++..|+++++.. .+++..+++.++++++|.++++|+++..+..... .....++|.++++|+++++.+.+
T Consensus 237 ~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~ 316 (576)
T PRK05620 237 LSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPERMSLQEIYVGGSAVPPILIK 316 (576)
T ss_pred hhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcccCceeEEEEcCCCCCHHHHH
Confidence 99988888889999988775 5799999999999999999999999988865432 22345799999999999999999
Q ss_pred HhH-hcCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEE
Q 045072 319 RTE-SLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVF 397 (556)
Q Consensus 319 ~~~-~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i 397 (556)
++. .+++++++.||+||++.++........ ...........++|.+.++. +++|+|+ +..++...++.|||++
T Consensus 317 ~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~---~~~~~~~~~~~~~G~~~~~~-~~~i~~~--g~~~~~~~~~~Gel~v 390 (576)
T PRK05620 317 AWEERYGVDVVHVWGMTETSPVGTVARPPSG---VSGEARWAYRVSQGRFPASL-EYRIVND--GQVMESTDRNEGEIQV 390 (576)
T ss_pred HHHHHhCCceeeeccccccccceeeeccCCc---cccccccccccccCCcCCce-eEEEecC--CccccCCCCCceEEEE
Confidence 887 568999999999999876554321110 00000001123678888888 9999986 5555432225799999
Q ss_pred ecCCccccccCCCCcc----------------ccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHH
Q 045072 398 RGGSMMLGYLKDPNGT----------------RKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVES 461 (556)
Q Consensus 398 ~~~~~~~gy~~~~~~~----------------~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~ 461 (556)
+|+.++.||+++++.+ ...+..+|||+|||++++++||.+++.||.+|+|+.+|.+|++.+||.
T Consensus 391 ~g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~i~~~eIE~ 470 (576)
T PRK05620 391 RGNWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIRSGGEWIYSAQLEN 470 (576)
T ss_pred EcCcccccccCCccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhhcCCEEEcHHHHHH
Confidence 9999999999999877 223445789999999999999999999999999999999999999999
Q ss_pred HHhcCCCccccEEEeecCCCCCeeeEEEEEeccccc-CCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHH
Q 045072 462 VLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELE-KKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFE 540 (556)
Q Consensus 462 ~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~-~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~ 540 (556)
.|.++|.|.+++|++.+++..|+.++++++..++.. .....+++.++++++++++++|..++++++||+|.+||++|++
T Consensus 471 ~l~~~p~v~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~~P~t~~GKv~r~~ 550 (576)
T PRK05620 471 YIMAAPEVVECAVIGYPDDKWGERPLAVTVLAPGIEPTRETAERLRDQLRDRLPNWMLPEYWTFVDEIDKTSVGKFDKKD 550 (576)
T ss_pred HHhcCCCceEEEEEeccCCCcCceeEEEEEecCCCCcccccHHHHHHHHHhhCccccCCeEEEEeccCCCCCcccCcHHH
Confidence 999999999999999999888888889888876643 1246789999999999999999999999999999999999999
Q ss_pred HHHHHHHh
Q 045072 541 LREMAKAM 548 (556)
Q Consensus 541 l~~~~~~~ 548 (556)
|++++.+.
T Consensus 551 L~~~~~~~ 558 (576)
T PRK05620 551 LRQHLADG 558 (576)
T ss_pred HHHHHhcC
Confidence 99998864
No 59
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.1e-66 Score=535.33 Aligned_cols=490 Identities=30% Similarity=0.450 Sum_probs=413.7
Q ss_pred CCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEec
Q 045072 14 LTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNN 93 (556)
Q Consensus 14 ~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 93 (556)
+++.+.|.++++.+|+++|+.+.++.+||.||.+++.++|.+|.+.|+++|++|+++++|+++++++++||+++|++++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 81 (497)
T PRK06145 2 FNLSASIAFHARRTPDRAALVYRDQEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGAVFLP 81 (497)
T ss_pred ccHHHHHHHHHHHCCCceEEEECCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEe
Confidence 47789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccccccc
Q 045072 94 INTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESLVT 173 (556)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (556)
+++..+.+++.++++.++++.++++.+....... ....+..+..... .... +.
T Consensus 82 l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~----------~~~~~~~~~~~~~----------------~~~~-~~ 134 (497)
T PRK06145 82 INYRLAADEVAYILGDAGAKLLLVDEEFDAIVAL----------ETPKIVIDAAAQA----------------DSRR-LA 134 (497)
T ss_pred cccccCHHHHHHHHHhcCCcEEEEccchhhhhhc----------ccceEEecCcccc----------------hhHH-Hh
Confidence 9999999999999999999999998765432110 1112222111000 0000 00
Q ss_pred cCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchh-hhHhHh
Q 045072 174 KGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSY-PWGMAA 252 (556)
Q Consensus 174 ~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~-~~~~~~ 252 (556)
.............++++++++|||||||.||+|.++|+++..........+++..+++++...|++|.+++.. .+..+.
T Consensus 135 ~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~ 214 (497)
T PRK06145 135 QGGLEIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLW 214 (497)
T ss_pred ccCCCCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHh
Confidence 0000111112345679999999999999999999999999876666666678899999999999999988865 466778
Q ss_pred cCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHHHHhH-hc-CCeEE
Q 045072 253 VGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVLFRTE-SL-GFLVS 328 (556)
Q Consensus 253 ~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~~~~~-~~-~~~l~ 328 (556)
.|+++++.+.+++..+++.++++++|.+.++|+++..++.... ...++++|.+++||++++..+.+.+. .+ +..++
T Consensus 215 ~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~ 294 (497)
T PRK06145 215 VGGTLRIHREFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYI 294 (497)
T ss_pred ccCEEEECCcCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCccccccccceEEEecCCCCCHHHHHHHHHHcCCCceE
Confidence 8999988888999999999999999999999999999987654 34567899999999999999998887 44 67899
Q ss_pred ecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccC
Q 045072 329 HGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLK 408 (556)
Q Consensus 329 ~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~ 408 (556)
+.||+||+++.+....... .....+++|.+.++. .++|+|+ ++..++.+ +.|||+++|++++.||++
T Consensus 295 ~~YG~tE~~~~~~~~~~~~---------~~~~~~~~G~~~~~~-~~~i~~~-~~~~~~~~--~~Gel~v~g~~~~~Gy~~ 361 (497)
T PRK06145 295 DAYGLTETCSGDTLMEAGR---------EIEKIGSTGRALAHV-EIRIADG-AGRWLPPN--MKGEICMRGPKVTKGYWK 361 (497)
T ss_pred EeecCcccCCcceeccCcc---------ccccCCCcccCCCCc-eEEEECC-CCCCCCCC--CceEEEEECcchhhhhcC
Confidence 9999999987554322110 111235789999998 9999997 67888877 689999999999999999
Q ss_pred CCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEE
Q 045072 409 DPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCA 488 (556)
Q Consensus 409 ~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~ 488 (556)
+++.+...|. ++||+|||+|++++||++++.||.+|+|+.+|.++++.+||+.|.++|+|.+++|++.+++..|+.+++
T Consensus 362 ~~~~~~~~~~-~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~ 440 (497)
T PRK06145 362 DPEKTAEAFY-GDWFRSGDVGYLDEEGFLYLTDRKKDMIISGGENIASSEVERVIYELPEVAEAAVIGVHDDRWGERITA 440 (497)
T ss_pred ChHHHHHHHh-CCCeeccceEEEcCCCcEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEecCCCccCceEEE
Confidence 9998888886 899999999999999999999999999999999999999999999999999999999999888888999
Q ss_pred EEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHH
Q 045072 489 FLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAK 546 (556)
Q Consensus 489 ~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~ 546 (556)
+++..+... ...+++.++++++++++++|..++++++||+|++||++|++|++++.
T Consensus 441 ~v~~~~~~~--~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~GKi~r~~l~~~~~ 496 (497)
T PRK06145 441 VVVLNPGAT--LTLEALDRHCRQRLASFKVPRQLKVRDELPRNPSGKVLKRVLRDELN 496 (497)
T ss_pred EEEECCCCC--CCHHHHHHHHHHhhhcCCCCCEEEEeccCCCCCcccccHHHHHHHhc
Confidence 988865443 56789999999999999999999999999999999999999998764
No 60
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.6e-66 Score=541.45 Aligned_cols=517 Identities=28% Similarity=0.436 Sum_probs=422.0
Q ss_pred cCCCCCCCCCHHHHHHHHHHhcCCCCEEEEC--CccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHH
Q 045072 6 PCTANSSPLTPLGFLERAATVYGDCPSIIYN--NLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFA 83 (556)
Q Consensus 6 ~~~~~~~~~t~~~~l~~~~~~~p~~~a~~~~--~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA 83 (556)
+.-.+....++.++|.+.++++|+++|+++. ++.+||.||.++++++|.+|.+.|+++||+|+++++|++++++++||
T Consensus 10 ~~~~~~~~~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a 89 (558)
T PRK12583 10 GGDKPLLTQTIGDAFDATVARFPDREALVVRHQALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFA 89 (558)
T ss_pred CCCCCcccCcHHHHHHHHHHHCCCCeEEEecCCCcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHH
Confidence 4445667789999999999999999999884 47899999999999999999999999999999999999999999999
Q ss_pred hhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccch-----hhHHHHHhcCCC-------CCCC---CCeEEEcCCC
Q 045072 84 IPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSR-----NLVVEAISLFPS-------DIKC---PPLVLIADHT 148 (556)
Q Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~-------~~~~---~~~~~~~~~~ 148 (556)
|+++|++++++++.++.+++.+++++++++++|++.... ..+......+.. .... ..++......
T Consensus 90 ~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (558)
T PRK12583 90 TARIGAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAP 169 (558)
T ss_pred HHhhCCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecCCC
Confidence 999999999999999999999999999999999976532 112221111100 0001 1112111110
Q ss_pred CCCCCCCCccccCCCcccccccccccCCCC-----CCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhh
Q 045072 149 DHDNDNKSSQTVDSNFCCTYESLVTKGDPN-----FKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLID 223 (556)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~ 223 (556)
. .....+++........ ........++++++++|||||||.||+|.++|+++..++......
T Consensus 170 ~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~ 236 (558)
T PRK12583 170 P-------------PGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAES 236 (558)
T ss_pred C-------------ccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHH
Confidence 0 0111222222211110 111122356789999999999999999999999998888777777
Q ss_pred cCCCCCCEEEEecChhhhhhchh-hhHhHhcCcEeEEec-CCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCC
Q 045072 224 WSIPKQPVYLWTLPMFHANGWSY-PWGMAAVGGTNVCLR-KFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPL 299 (556)
Q Consensus 224 ~~~~~~~~~~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l 299 (556)
+++..+|++++.+|++|.+|+.. .+.++..|+++++.. .+++..+++.++++++|+++++|+++..+..... ...+
T Consensus 237 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~ 316 (558)
T PRK12583 237 LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDL 316 (558)
T ss_pred hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCc
Confidence 88899999999999999999765 566667777776543 5789999999999999999999999988876554 3457
Q ss_pred CCCeEEEEeCCCCcHHHHHHhH-hcC-CeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEe
Q 045072 300 RNPVHILTAGAPPPAAVLFRTE-SLG-FLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVI 377 (556)
Q Consensus 300 ~~l~~v~~~g~~~~~~~~~~~~-~~~-~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~ 377 (556)
+++|.+++||+++++.+.+++. .++ ..+++.||+||++.++..+..... ......++|.|.++. .++|+
T Consensus 317 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~--------~~~~~~~vG~p~~~~-~~~i~ 387 (558)
T PRK12583 317 SSLRTGIMAGAPCPIEVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADD--------LERRVETVGRTQPHL-EVKVV 387 (558)
T ss_pred hhheEEEecCCCCCHHHHHHHHHHcCCcceeccccccccccceeccCcccc--------cccccCCCCccCCCC-eEEEE
Confidence 8999999999999999998887 554 479999999999987655432111 112346889999998 99999
Q ss_pred cCCCCceecCCCCeeeEEEEecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChH
Q 045072 378 DSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSV 457 (556)
Q Consensus 378 d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~ 457 (556)
|++ +.+++.+ +.|||+++|+.++.||++++..+...+..++||+|||+|++++||++++.||.+|+|+.+|.+|+|.
T Consensus 388 d~~-~~~~~~g--~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~ 464 (558)
T PRK12583 388 DPD-GATVPRG--EIGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPR 464 (558)
T ss_pred CCC-CCCCCCC--CeeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccceEEECCCccEEEEecccceeEECCEEeCHH
Confidence 985 8888887 6899999999999999999998887776689999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCcc
Q 045072 458 EVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIK 537 (556)
Q Consensus 458 ~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~ 537 (556)
+||+.+.++++|.+++|++.+++..++.++++++..++.. ...+++.++++++++++++|..++++++||+|++||++
T Consensus 465 ~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~--~~~~~i~~~~~~~L~~~~~P~~i~~v~~lP~t~sGK~~ 542 (558)
T PRK12583 465 EIEEFLFTHPAVADVQVFGVPDEKYGEEIVAWVRLHPGHA--ASEEELREFCKARIAHFKVPRYFRFVDEFPMTVTGKVQ 542 (558)
T ss_pred HHHHHHHhCCCeeEEEEEeeecCCCCcEEEEEEEECCCCC--CCHHHHHHHHHhhcccCcCCcEEEEeccCCCCCCCCcc
Confidence 9999999999999999999998887888999988776543 56889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhc
Q 045072 538 KFELREMAKAMG 549 (556)
Q Consensus 538 r~~l~~~~~~~~ 549 (556)
|++|+++..++.
T Consensus 543 r~~L~~~~~~~~ 554 (558)
T PRK12583 543 KFRMREISIEEL 554 (558)
T ss_pred HHHHHHHHHhhc
Confidence 999999877654
No 61
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=4.3e-67 Score=558.28 Aligned_cols=520 Identities=25% Similarity=0.302 Sum_probs=399.1
Q ss_pred CCHHHHHHHHHHhcCCCCEEEEC------------C-----------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Q 045072 14 LTPLGFLERAATVYGDCPSIIYN------------N-----------LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVV 70 (556)
Q Consensus 14 ~t~~~~l~~~~~~~p~~~a~~~~------------~-----------~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~ 70 (556)
.|+.++|+++++.+||++|+.+. + +.+||+||.++++++|.+|.+.|+++||+|+|+
T Consensus 58 ~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~ 137 (696)
T PLN02387 58 TTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERVAIF 137 (696)
T ss_pred CCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 68999999999999999999532 1 238999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCC
Q 045072 71 APNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDH 150 (556)
Q Consensus 71 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (556)
++|+++|++++|||+++|++++|+++.++.+++.++|++++++++|++.+....+.......+. ...++.+++....
T Consensus 138 ~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~~---l~~ii~~~~~~~~ 214 (696)
T PLN02387 138 ADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLET---VKRVIYMDDEGVD 214 (696)
T ss_pred cCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccCC---ceEEEEECCCCch
Confidence 9999999999999999999999999999999999999999999999998777666655444332 4455655442211
Q ss_pred CCCCCCccccCCCcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhc-CCCCC
Q 045072 151 DNDNKSSQTVDSNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDW-SIPKQ 229 (556)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~-~~~~~ 229 (556)
... ............++++...+........+..++|+++|+|||||||.||||++||++++.+.......+ .+.++
T Consensus 215 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~ 292 (696)
T PLN02387 215 SDS--SLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVPKLGKN 292 (696)
T ss_pred hhh--hhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhcCCCCCC
Confidence 000 000000111233444444332221112234678999999999999999999999999988776655443 57889
Q ss_pred CEEEEecChhhhhhchhhhHhHhcCcEeEEecCCC--------HHHHHHHHHHhCCcEEechhHHHHHHHcCCC------
Q 045072 230 PVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRKFD--------AAVIYKMIRQHGVTHMCGAPVVLNMISNLPR------ 295 (556)
Q Consensus 230 ~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~------ 295 (556)
|++++.+|++|.+++...+.++..|+++.+-.+.. +..++..+++++||+++++|.+++.+.+...
T Consensus 293 d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~~~ 372 (696)
T PLN02387 293 DVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVDAK 372 (696)
T ss_pred CEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHHhcc
Confidence 99999999999999887666677777766543211 2345678999999999999999988864210
Q ss_pred --------------------C----------------------C-CCCCCeEEEEeCCCCcHHHHHHhH-hcCCeEEecc
Q 045072 296 --------------------S----------------------E-PLRNPVHILTAGAPPPAAVLFRTE-SLGFLVSHGY 331 (556)
Q Consensus 296 --------------------~----------------------~-~l~~l~~v~~~g~~~~~~~~~~~~-~~~~~l~~~y 331 (556)
. . ..+++|.+++||+++++++.+.++ .+++.+++.|
T Consensus 373 ~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~g~~v~~~Y 452 (696)
T PLN02387 373 GGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICLGAPIGQGY 452 (696)
T ss_pred cHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHcCCCeeEee
Confidence 0 0 015899999999999999988887 4799999999
Q ss_pred cccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCC-ceecCCCCeeeEEEEecCCccccccCCC
Q 045072 332 GLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESG-LSVSHDGASLGEIVFRGGSMMLGYLKDP 410 (556)
Q Consensus 332 G~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~-~~~~~~~~~~Gel~i~~~~~~~gy~~~~ 410 (556)
|+||+++.++..... ....+++|.|.+++ +++|+|.+++ ..........|||+++||+++.|||++|
T Consensus 453 G~TEt~~~~~~~~~~-----------~~~~gsvG~p~p~~-evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY~~~p 520 (696)
T PLN02387 453 GLTETCAGATFSEWD-----------DTSVGRVGPPLPCC-YVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGYFKNQ 520 (696)
T ss_pred chhhcccceeecCcc-----------cCCCCccCCCCCce-EEEEeeccccCcccCCCCCCCceEEeccCcccchhcCCH
Confidence 999998765543210 12246899999999 9999994333 3221111135999999999999999999
Q ss_pred CccccCcC--CCC--ceecCceEEEecCCcEEEEccCCCeEee-CcEeeChHHHHHHHhcCCCccccEEEeecCCCCCee
Q 045072 411 NGTRKCMK--DDG--WFYTGDVGVIHADGYLEIKDRSKDVIIS-GGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGET 485 (556)
Q Consensus 411 ~~~~~~~~--~~~--~~~TGD~~~~~~dg~l~~~GR~~d~i~~-~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~ 485 (556)
+.+...|. ++| ||+|||+|++|+||++++.||.+|+||. +|++|+|.+||++|.+||.|.+++|++.+.. ..
T Consensus 521 e~T~~~f~~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~~~p~V~~~~V~g~~~~---~~ 597 (696)
T PLN02387 521 EKTDEVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYVDNIMVHADPFH---SY 597 (696)
T ss_pred HHHhhhhccccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHhcCCCeeEEEEEecCCc---ce
Confidence 99998883 345 9999999999999999999999999996 7999999999999999999999999987632 35
Q ss_pred eEEEEEecccccC-------------------CCCHHHHHHHH-----HhcCCCCcccceeEEecCCC------CCCCCC
Q 045072 486 PCAFLSLKAELEK-------------------KPTEKEIIEYC-----RARLPRYMVPKTVVFKEELP------KTSTGK 535 (556)
Q Consensus 486 ~~~~v~~~~~~~~-------------------~~~~~~i~~~l-----~~~l~~~~~p~~~~~v~~lP------~t~~GK 535 (556)
++|+|++.++.-. ....+++.+.+ +++|+.+.+|+.+.++++.. +|+++|
T Consensus 598 ~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~~~~i~l~~~~~t~~~g~lT~t~K 677 (696)
T PLN02387 598 CVALVVPSQQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIKLLPEPWTPESGLVTAALK 677 (696)
T ss_pred EEEEEEeCHHHHHHHHHHcCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEECCCCCCCCCcCChhhh
Confidence 7888887654210 00122333333 23589999999999987643 788889
Q ss_pred ccHHHHHHHHHHhccccc
Q 045072 536 IKKFELREMAKAMGKSKV 553 (556)
Q Consensus 536 v~r~~l~~~~~~~~~~~~ 553 (556)
++|+.+++.|++.++.-|
T Consensus 678 ~~R~~i~~~y~~~i~~ly 695 (696)
T PLN02387 678 LKREQIRKKFKDDLKKLY 695 (696)
T ss_pred hhhHHHHHHHHHHHHHHh
Confidence 999999999999887654
No 62
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=9.3e-66 Score=536.73 Aligned_cols=499 Identities=23% Similarity=0.349 Sum_probs=415.9
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 045072 11 SSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAI 90 (556)
Q Consensus 11 ~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (556)
|...++.++|.++++ |+++|+++.++.+||+||.++++++|.+|.+.|+++|++|+++++|+++++++++||+++|++
T Consensus 22 ~~~~~~~~~~~~~a~--p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~G~v 99 (536)
T PRK10946 22 WQDLPLTDILTRHAA--SDAIAVICGERQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKLGVA 99 (536)
T ss_pred ecCccHHHHHHHhhC--CCCeEEEeCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHcCeE
Confidence 456789999999887 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHHhccCCeEEEEeccch-----hhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcc
Q 045072 91 LNNINTRLDARTISVLLQHSESKLVLVDYQSR-----NLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFC 165 (556)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (556)
++++.+.....++.+++++++++.++++.+.. ..........+ ....+.+.+... .
T Consensus 100 ~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~---------------~ 160 (536)
T PRK10946 100 PVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHS----SLRVVLLLNDDG---------------E 160 (536)
T ss_pred EecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCC----CceEEEEecCCC---------------C
Confidence 88877777788899999999999999986531 11111211111 122333322110 0
Q ss_pred cccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhch
Q 045072 166 CTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWS 245 (556)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~ 245 (556)
..+.+.+....... ...+..++++++++|||||||.||+|+++|+++..+.......+++..++++++.+|++|.+++.
T Consensus 161 ~~~~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~ 239 (536)
T PRK10946 161 HSLDDAINHPAEDF-TATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYPMS 239 (536)
T ss_pred ccHHHHhhCccccc-ccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCceEEEecCccccccch
Confidence 12222222221111 11234578999999999999999999999999998888777778889999999999999998876
Q ss_pred h--hhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC----CCCCCCCeEEEEeCCCCcHHHHHH
Q 045072 246 Y--PWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR----SEPLRNPVHILTAGAPPPAAVLFR 319 (556)
Q Consensus 246 ~--~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----~~~l~~l~~v~~~g~~~~~~~~~~ 319 (556)
. .+.++..|+++++.+.+++..++++++++++|++.++|.++..+.+... ...+++++.+++||+++++++.++
T Consensus 240 ~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~ 319 (536)
T PRK10946 240 SPGALGVFLAGGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLARR 319 (536)
T ss_pred hhhHHHHhhcCcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHHHH
Confidence 3 6778889999988888899999999999999999999999999976521 345678999999999999999998
Q ss_pred hH-hcCCeEEecccccccccceeeccccccccCCChhhhccccccCcccc-ceeeeeEEecCCCCceecCCCCeeeEEEE
Q 045072 320 TE-SLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRT-VCFTEIDVIDSESGLSVSHDGASLGEIVF 397 (556)
Q Consensus 320 ~~-~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~~i~d~~~~~~~~~~~~~~Gel~i 397 (556)
+. .+++++++.||+||++. .+..... .......++|.|+ ++. .++|+|+ ++.+++.| +.|||++
T Consensus 320 ~~~~~g~~~~~~YG~tE~~~-~~~~~~~---------~~~~~~~~~G~p~~~~~-~v~i~d~-~~~~~~~g--~~Gel~v 385 (536)
T PRK10946 320 IPAELGCQLQQVFGMAEGLV-NYTRLDD---------SDERIFTTQGRPMSPDD-EVWVADA-DGNPLPQG--EVGRLMT 385 (536)
T ss_pred HHHhcCCeEEEeecccccce-eeecCCC---------ccccccccCCcccCCCc-eEEEECC-CCCCCCCC--CccEEEE
Confidence 87 56999999999999643 2221111 1112346789998 566 9999997 78888888 7899999
Q ss_pred ecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEee
Q 045072 398 RGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVAR 477 (556)
Q Consensus 398 ~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~ 477 (556)
+|+.++.||+++++.+...|..++||+|||+|++|+||++++.||.+|+++.+|++++|.+||+.|.++|+|.+++|++.
T Consensus 386 ~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~ 465 (536)
T PRK10946 386 RGPYTFRGYYKSPQHNASAFDANGFYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAEEIENLLLRHPAVIHAALVSM 465 (536)
T ss_pred ecCccchhhcCCcccchhhcccCCceecCceEEECCCCcEEEeccccceeecCCEEEcHHHHHHHHHhCCCcceEEEEcC
Confidence 99999999999999999889889999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhc-CCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHhc
Q 045072 478 PDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRAR-LPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMG 549 (556)
Q Consensus 478 ~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~-l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~~ 549 (556)
+++..|+.++++++..+. .+..++.+++++. +++|++|..+.+++++|+|++||++|++|++++.++.
T Consensus 466 ~~~~~g~~~~a~vv~~~~----~~~~~l~~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKv~r~~L~~~~~~~~ 534 (536)
T PRK10946 466 EDELMGEKSCAFLVVKEP----LKAVQLRRFLREQGIAEFKLPDRVECVDSLPLTAVGKVDKKQLRQWLASRA 534 (536)
T ss_pred CCcccCceEEEEEEeCCC----CCHHHHHHHHHhCCccccccCcEEEEeccCCCCCCCcccHHHHHHHHHhhc
Confidence 998888889999887654 5678899999876 9999999999999999999999999999999987654
No 63
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=1.2e-65 Score=535.04 Aligned_cols=501 Identities=24% Similarity=0.370 Sum_probs=412.2
Q ss_pred CCCCHHHHHHHHHHhcCCCCEEEECC-----ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhh
Q 045072 12 SPLTPLGFLERAATVYGDCPSIIYNN-----LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPF 86 (556)
Q Consensus 12 ~~~t~~~~l~~~~~~~p~~~a~~~~~-----~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 86 (556)
...++.+++++.++++|+++|+.+.+ +.+||.||.+.++++|.+|.+.|+++||+|+++++|+++++++++||++
T Consensus 5 ~~~~l~~~~~~~a~~~p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~ 84 (517)
T PRK08008 5 GGQHLRQMWDDLADVYGHKTALIFESSGGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAK 84 (517)
T ss_pred ccccHHHHHHHHHHHCCCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 34689999999999999999999864 6899999999999999999999999999999999999999999999999
Q ss_pred ccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCccc
Q 045072 87 TGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCC 166 (556)
Q Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (556)
+|+++++++|..+.+++.++++.++++.++++.+....+.+........ ...++........ .....
T Consensus 85 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-----------~~~~~ 151 (517)
T PRK08008 85 IGAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATP--LRHICLTRVALPA-----------DDGVS 151 (517)
T ss_pred cCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcccc--CcEEEEecCCCcc-----------ccccc
Confidence 9999999999999999999999999999999998777666554332211 2233333222100 00112
Q ss_pred ccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchh
Q 045072 167 TYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSY 246 (556)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~ 246 (556)
.+.+.............+..++++++++|||||||.||+|.++|.++............+..++++++.+|++|..+...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 231 (517)
T PRK08008 152 SFTQLKAQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCT 231 (517)
T ss_pred CHHHHhccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHHHH
Confidence 23332222211111122345689999999999999999999999999765443333345778999999999999876554
Q ss_pred -hhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHHHHhH-h
Q 045072 247 -PWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVLFRTE-S 322 (556)
Q Consensus 247 -~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~~~~~-~ 322 (556)
++.++..|+++++...+++..+++.++++++|++.++|.+++.+..... ......++.+.++ ++++......+. .
T Consensus 232 ~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~ 310 (517)
T PRK08008 232 AAMAAFSAGATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHCLREVMFY-LNLSDQEKDAFEER 310 (517)
T ss_pred HHHHHHhcCcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccccccceeeEEe-cCCCHHHHHHHHHH
Confidence 6677788999988888999999999999999999999999999876543 2234567777665 478888887776 5
Q ss_pred cCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEec---
Q 045072 323 LGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRG--- 399 (556)
Q Consensus 323 ~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~--- 399 (556)
+++++++.||+||+++.+...... ......++|.|.+++ +++|+|+ ++.+++.+ +.|||+++|
T Consensus 311 ~~~~~~~~YG~tE~~~~~~~~~~~----------~~~~~~~~G~~~~g~-~~~i~d~-~~~~~~~g--~~Gel~v~g~~~ 376 (517)
T PRK08008 311 FGVRLLTSYGMTETIVGIIGDRPG----------DKRRWPSIGRPGFCY-EAEIRDD-HNRPLPAG--EIGEICIKGVPG 376 (517)
T ss_pred hCCeEEeeccccccccccccCCcc----------ccccCCccccCCCCc-EEEEECC-CCCCCCCC--CcceEEEeCCCC
Confidence 699999999999998655432211 112235799999998 9999997 78888887 689999998
Q ss_pred CCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecC
Q 045072 400 GSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPD 479 (556)
Q Consensus 400 ~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~ 479 (556)
++++.||+++++.+...|..+|||+|||+|++++||.+++.||.+|+|+.+|++|+|.+||+++.+++.|.+++|++.++
T Consensus 377 ~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~iE~~l~~~~~v~~~~v~g~~~ 456 (517)
T PRK08008 377 KTIFKEYYLDPKATAKVLEADGWLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKD 456 (517)
T ss_pred cchhhhHhCChHHHhhcccCCCCeeccceEEECCCCcEEEeecccceEEeCCEEECHHHHHHHHHhCCceeeEEEEccCC
Confidence 58999999999999988988999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHH
Q 045072 480 EFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELR 542 (556)
Q Consensus 480 ~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~ 542 (556)
+..++.+.++|+..++.. .+.+++.++++++++++++|..++++++||+|++||++|+.|+
T Consensus 457 ~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~gK~~r~~l~ 517 (517)
T PRK08008 457 SIRDEAIKAFVVLNEGET--LSEEEFFAFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIKKNLK 517 (517)
T ss_pred CCCCceEEEEEEECCCCC--CCHHHHHHHHHhhcccccCCcEEEEeccCCCCCccceehhhcC
Confidence 887888999999887644 5678999999999999999999999999999999999999874
No 64
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.5e-66 Score=533.05 Aligned_cols=478 Identities=27% Similarity=0.380 Sum_probs=400.4
Q ss_pred HHHHHhcCCCCEEEE--CCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCC
Q 045072 21 ERAATVYGDCPSIIY--NNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRL 98 (556)
Q Consensus 21 ~~~~~~~p~~~a~~~--~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~ 98 (556)
+.+++.+||++|+.+ .++.+||.||.+.++++|.+|.+.|+++||+|+++++|++++++++|||+++|++++|+++.+
T Consensus 2 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~ 81 (488)
T PRK09088 2 AFHARLQPQRLAAVDLALGRRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLNWRL 81 (488)
T ss_pred chhhhhCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCccC
Confidence 456788999999987 578999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccccccccCCCC
Q 045072 99 DARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESLVTKGDPN 178 (556)
Q Consensus 99 ~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (556)
+.+++.+++++++++++|+++...... ...+.+. .+.+.......
T Consensus 82 ~~~~~~~~~~~~~~~~ii~~~~~~~~~-------------~~~~~~~---------------------~~~~~~~~~~~- 126 (488)
T PRK09088 82 SASELDALLQDAEPRLLLGDDAVAAGR-------------TDVEDLA---------------------AFIASADALEP- 126 (488)
T ss_pred CHHHHHHHHHhCCCCEEEEcchhhccc-------------ccccchh---------------------hhhhhcccccc-
Confidence 999999999999999999976532210 0000000 00000000000
Q ss_pred CCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchh-hhHhHhcCcEe
Q 045072 179 FKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSY-PWGMAAVGGTN 257 (556)
Q Consensus 179 ~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~-~~~~~~~g~~~ 257 (556)
........+++++++|||||||.||+|.++|+++............+..++++++.+|++|.+++.. +..++..|+++
T Consensus 127 -~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~ 205 (488)
T PRK09088 127 -ADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSI 205 (488)
T ss_pred -ccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEE
Confidence 0011234578999999999999999999999999877766666667889999999999999999876 44566778888
Q ss_pred EEecCCCHHHHHHHHH--HhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHHHHhHhcCCeEEecccc
Q 045072 258 VCLRKFDAAVIYKMIR--QHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVLFRTESLGFLVSHGYGL 333 (556)
Q Consensus 258 ~~~~~~~~~~~~~~i~--~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~~~~~~~~~~l~~~yG~ 333 (556)
++...+++..++..+. ++++|+++++|.++..+.+... ...+++++.+++||++++......+.+.++++++.||+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~g~~v~~~YG~ 285 (488)
T PRK09088 206 LVSNGFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPGFDAAALRHLTALFTGGAPHAAEDILGWLDDGIPMVDGFGM 285 (488)
T ss_pred EEcCCCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcCcCccccccceEEEecCCCCCHHHHHHHHHhCCceeeeecc
Confidence 7777788999998886 4899999999999999987643 34567999999999999998888777668999999999
Q ss_pred cccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccCCCCcc
Q 045072 334 TETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGT 413 (556)
Q Consensus 334 tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~ 413 (556)
||++++...... ........+++|.+.+++ +++|+|+ ++.+++.+ +.|||+++|++++.||+++++.+
T Consensus 286 TE~~~~~~~~~~--------~~~~~~~~~~vG~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gY~~~~~~~ 353 (488)
T PRK09088 286 SEAGTVFGMSVD--------CDVIRAKAGAAGIPTPTV-QTRVVDD-QGNDCPAG--VPGELLLRGPNLSPGYWRRPQAT 353 (488)
T ss_pred cccccccccCCC--------cccccccCCccccCCCCc-EEEEECC-CCCCCcCC--CceEEEEECCccchhhcCChhhh
Confidence 999865432110 000111336789999999 9999996 68888877 67999999999999999999988
Q ss_pred ccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEec
Q 045072 414 RKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLK 493 (556)
Q Consensus 414 ~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~ 493 (556)
...+..+|||+|||+|+++++|.+++.||.+|+|+.+|++|+|.+||++|.++|.|.+++|++.+++..|+..+++|+..
T Consensus 354 ~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~ 433 (488)
T PRK09088 354 ARAFTGDGWFRTGDIARRDADGFFWVVDRKKDMFISGGENVYPAEIEAVLADHPGIRECAVVGMADAQWGEVGYLAIVPA 433 (488)
T ss_pred hhhhcCCCCeeecceEEEcCCCcEEEeccccceEEeCCEEECHHHHHHHHHhCCCcceEEEEeCCCccCCceeEEEEEEC
Confidence 88888799999999999999999999999999999999999999999999999999999999999887788888888877
Q ss_pred ccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHh
Q 045072 494 AELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAM 548 (556)
Q Consensus 494 ~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 548 (556)
++.. .+.+++.++++++++++++|..+.++++||+|++||++|++|++++.+.
T Consensus 434 ~~~~--~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~~~~~~ 486 (488)
T PRK09088 434 DGAP--LDLERIRSHLSTRLAKYKVPKHLRLVDALPRTASGKLQKARLRDALAAG 486 (488)
T ss_pred CCCC--CCHHHHHHHHHhhCcCCCCCCEEEEcccCCCCCCCceeHHHHHHHHHhc
Confidence 6543 4678999999999999999999999999999999999999999998765
No 65
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.1e-65 Score=533.86 Aligned_cols=508 Identities=26% Similarity=0.367 Sum_probs=423.1
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 045072 11 SSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAI 90 (556)
Q Consensus 11 ~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (556)
.++.|+.++|.++++++|+++|+++.++.+||.||.+.++++|..|.+.|+++|++|+++++|+++++++++||+++|++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~G~~ 88 (524)
T PRK06188 9 HSGATYGHLLVSALKRYPDRPALVLGDTRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLAGLR 88 (524)
T ss_pred cCCccHHHHHHHHHHHCCCCeEEEECCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCE
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHHhccCCeEEEEecc-chhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccc
Q 045072 91 LNNINTRLDARTISVLLQHSESKLVLVDYQ-SRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYE 169 (556)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (556)
+++++|..+.+++.++++.++++.+++++. .............. ...++.+..... ...+.
T Consensus 89 ~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---------------~~~~~ 150 (524)
T PRK06188 89 RTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVPS---LKHVLTLGPVPD---------------GVDLL 150 (524)
T ss_pred EEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcCC---ceEEEEeCCccc---------------hhhHH
Confidence 999999999999999999999999999876 33333332222110 122332222110 00000
Q ss_pred cccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchhhhH
Q 045072 170 SLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSYPWG 249 (556)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~ 249 (556)
+..... ..........++++++++|||||||.||+|.++|.++..........+++..++++++.+|++|..++. .+.
T Consensus 151 ~~~~~~-~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~-~~~ 228 (524)
T PRK06188 151 AAAAKF-GPAPLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGAF-FLP 228 (524)
T ss_pred Hhhhcc-CcccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhHH-HHH
Confidence 000000 000111112345799999999999999999999999998888877788899999999999999988864 567
Q ss_pred hHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHHHHhH-hcCCe
Q 045072 250 MAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVLFRTE-SLGFL 326 (556)
Q Consensus 250 ~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~~~~~-~~~~~ 326 (556)
.++.|+++++.+..++..+++.++++++|+++++|+++..+.+... ...++++|.+++||++++++....+. .++..
T Consensus 229 ~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gg~~~~~~~~~~~~~~~~~~ 308 (524)
T PRK06188 229 TLLRGGTVIVLAKFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRDLSSLETVYYGASPMSPVRLAEAIERFGPI 308 (524)
T ss_pred HHHcCCEEEEcCCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCCCcceeEEEEcCCCCCHHHHHHHHHHhCch
Confidence 7888999999999999999999999999999999999999987764 45678999999999999998777665 66888
Q ss_pred EEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccc
Q 045072 327 VSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGY 406 (556)
Q Consensus 327 l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy 406 (556)
+++.||+||++..+......... ........++|.|.+++ .++|+|+ ++.+++.+ +.|||+++|+.++.||
T Consensus 309 ~~~~YG~tE~~~~~~~~~~~~~~-----~~~~~~~~~~G~p~~g~-~v~i~~~-~~~~~~~g--~~Gel~v~~~~~~~gy 379 (524)
T PRK06188 309 FAQYYGQTEAPMVITYLRKRDHD-----PDDPKRLTSCGRPTPGL-RVALLDE-DGREVAQG--EVGEICVRGPLVMDGY 379 (524)
T ss_pred hhheeCccccCCceeecCchhcc-----ccccccCCccccccCCc-EEEEEcC-CCCCCCCC--CeeEEEEECcchhhhh
Confidence 99999999997665543221110 01122345789999999 9999997 68888887 6899999999999999
Q ss_pred cCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeee
Q 045072 407 LKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETP 486 (556)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~ 486 (556)
++++..+...+. +|||+|||++++++||.+++.||.+|+++.+|++|+|.+||.+|.++++|.+++|++.+++..++.+
T Consensus 380 ~~~~~~~~~~~~-~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~ 458 (524)
T PRK06188 380 WNRPEETAEAFR-DGWLHTGDVAREDEDGFYYIVDRKKDMIVTGGFNVFPREVEDVLAEHPAVAQVAVIGVPDEKWGEAV 458 (524)
T ss_pred cCChHHhhhhhc-CCceeecceEEEcCCccEEEEeccccceecCCEEECHHHHHHHHHhCCCeeEEEEEeccCCCcCceE
Confidence 999998888776 8999999999999999999999999999999999999999999999999999999999888778889
Q ss_pred EEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHhcc
Q 045072 487 CAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMGK 550 (556)
Q Consensus 487 ~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~~~ 550 (556)
.++++..+... ...+++.+++++.++.+++|..++++++||+|++||++|++|+++|.+...
T Consensus 459 ~~~v~~~~~~~--~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~gKi~r~~L~~~~~~~~~ 520 (524)
T PRK06188 459 TAVVVLRPGAA--VDAAELQAHVKERKGSVHAPKQVDFVDSLPLTALGKPDKKALRARYWEGRG 520 (524)
T ss_pred EEEEEECCCCC--CCHHHHHHHHHHhcccCCCCcEEEEecCCCCCccccccHHHHHHHHHhhcc
Confidence 99888876544 567899999999999999999999999999999999999999999865443
No 66
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=5e-66 Score=554.86 Aligned_cols=496 Identities=19% Similarity=0.282 Sum_probs=396.2
Q ss_pred CCCCHHHHHHHHHHhcCC-CCEEEECC-ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccc
Q 045072 12 SPLTPLGFLERAATVYGD-CPSIIYNN-LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGA 89 (556)
Q Consensus 12 ~~~t~~~~l~~~~~~~p~-~~a~~~~~-~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (556)
+..|+.+.|.++++++|+ ++|+.+.+ +++||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|+
T Consensus 202 ~~~t~~~~l~~~~~~~p~~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~lA~~~~G~ 280 (718)
T PRK08043 202 PRETLYEALLSAQYRYGAGKPCIEDVNFTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVIFGASLRRR 280 (718)
T ss_pred CCCCHHHHHHHHHHHhCCCCcceEcCCCCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHHHHHHHcCC
Confidence 357899999999999998 58887643 7899999999999999999987 59999999999999999999999999999
Q ss_pred eEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHH--HHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccc
Q 045072 90 ILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVV--EAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCT 167 (556)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (556)
+++|+++.++.+++.+++++++++++|++.+..+... ....... ....+.+.+.... .... .....
T Consensus 281 v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~-------~~~~-~~~~~ 348 (718)
T PRK08043 281 IPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLT----QVRWVYLEDLKDD-------VTTA-DKLWI 348 (718)
T ss_pred cccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhc----cccEEEhhhhhhh-------cchh-HHHHH
Confidence 9999999999999999999999999999876543211 0000000 0122222211000 0000 00000
Q ss_pred cccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchh-
Q 045072 168 YESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSY- 246 (556)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~- 246 (556)
..+... .. ....+..++++++++|||||||.||||.++|.++..........+++.++|++++.+|++|.+++..
T Consensus 349 ~~~~~~---~~-~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~g~~~~ 424 (718)
T PRK08043 349 FAHLLM---PR-LAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHSFGLTVG 424 (718)
T ss_pred HHHHhC---Cc-cccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhhhhhHHH
Confidence 000000 00 0011245689999999999999999999999999888777777778899999999999999999865
Q ss_pred hhHhHhcCcEeEEecC-CCHHHHHHHHHHhCCcEEechhHHHHHHHcCCCCCCCCCCeEEEEeCCCCcHHHHHHhH-hcC
Q 045072 247 PWGMAAVGGTNVCLRK-FDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPRSEPLRNPVHILTAGAPPPAAVLFRTE-SLG 324 (556)
Q Consensus 247 ~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~l~~v~~~g~~~~~~~~~~~~-~~~ 324 (556)
++.++..|+++++.+. +++..+++.+.++++|+++++|+++..+.+......++++|.+++||+++++++.+.++ .++
T Consensus 425 ~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~g 504 (718)
T PRK08043 425 LFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFANPYDFARLRYVVAGAEKLQESTKQLWQDKFG 504 (718)
T ss_pred HHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhcCcccccceEEEEEeCccCCHHHHHHHHHHcC
Confidence 6778889999988764 67788999999999999999999998887654445678999999999999999999888 579
Q ss_pred CeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccc
Q 045072 325 FLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMML 404 (556)
Q Consensus 325 ~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~ 404 (556)
+.+++.||+||+++++..... .....+++|.|.++. +++|+|+ ++. + +.|||+++|++++.
T Consensus 505 ~~l~~~YG~TE~~~~~~~~~~-----------~~~~~~svG~p~pg~-~~~i~d~-~~~----~--~~Gel~v~g~~v~~ 565 (718)
T PRK08043 505 LRILEGYGVTECAPVVSINVP-----------MAAKPGTVGRILPGM-DARLLSV-PGI----E--QGGRLQLKGPNIMN 565 (718)
T ss_pred CCeecccCcccccceEEecCC-----------cccCCCCCCCcCCCC-eeEEecC-CCC----C--CceEEEEecCCccc
Confidence 999999999999876543211 012346899999999 9999986 332 2 45999999999999
Q ss_pred cccC--CCCc-------cccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEE
Q 045072 405 GYLK--DPNG-------TRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVV 475 (556)
Q Consensus 405 gy~~--~~~~-------~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~ 475 (556)
|||+ +++. +...+..+|||+|||+|++|+||++++.||.+|+|+.+|++|+|.+||+.+.+++.+.+++|+
T Consensus 566 GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~~~~~~~avv 645 (718)
T PRK08043 566 GYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKQHATA 645 (718)
T ss_pred cccCCCCcccccccccccccccccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHHHHHHHHHhCCccceEEEE
Confidence 9998 3442 111223379999999999999999999999999999999999999999999999989899999
Q ss_pred eecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhc-CCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHh
Q 045072 476 ARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRAR-LPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAM 548 (556)
Q Consensus 476 ~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~-l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 548 (556)
+.+++..|+.+++++. +. ..+.+++.++++++ ++.|++|..++++++||+|++||++|++|++++.+.
T Consensus 646 ~~~~~~~ge~~v~~~~---~~--~~~~~~l~~~~~~~~l~~~~vP~~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 714 (718)
T PRK08043 646 IKSDASKGEALVLFTT---DS--ELTREKLQQYAREHGVPELAVPRDIRYLKQLPLLGSGKPDFVTLKSMVDEP 714 (718)
T ss_pred EccCCCCCceEEEEEc---Cc--ccCHHHHHHHHHhcCCCcccCCceEEEecccCcCCCCCcCHHHHHHHHhcc
Confidence 9988888888877653 11 15678899999987 999999999999999999999999999999988663
No 67
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=3.2e-65 Score=535.83 Aligned_cols=510 Identities=25% Similarity=0.356 Sum_probs=408.0
Q ss_pred CCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCChHHHHHHHHHhhhccceEe
Q 045072 14 LTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSI-GITRGHVVSVVAPNIPAMYEAHFAIPFTGAILN 92 (556)
Q Consensus 14 ~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~-g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (556)
+++.+.|.++++++|+++|+.+.++++||.||.++++++|.+|.+. |+++||+|+++++|+++++++++||+++|++++
T Consensus 24 ~~~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~G~v~v 103 (562)
T PRK12492 24 KSVVEVFERSCKKFADRPAFSNLGVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLIVV 103 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEecCCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEe
Confidence 5899999999999999999999889999999999999999999985 999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCC-CCCCC----C-------CCcccc
Q 045072 93 NINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHT-DHDND----N-------KSSQTV 160 (556)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~-------~~~~~~ 160 (556)
+++|..+.+++.+++++++++++++++...+.......... ...++...... ..... + ...+..
T Consensus 104 ~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (562)
T PRK12492 104 NTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDTG----IEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMVPAY 179 (562)
T ss_pred ccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhccC----ceEEEeechhhccccccchhccccccccccccccc
Confidence 99999999999999999999999998766554433322110 11111110000 00000 0 000000
Q ss_pred CCCcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcC---------CCC-CC
Q 045072 161 DSNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWS---------IPK-QP 230 (556)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~---------~~~-~~ 230 (556)
.......+++.............+...+++++++|||||||.||+|.++|+++..+.......+. +.. .+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (562)
T PRK12492 180 HLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMKEGQE 259 (562)
T ss_pred CCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccccCCCe
Confidence 01111233333322221111112345679999999999999999999999998766554433221 223 35
Q ss_pred EEEEecChhhhhhchh-hhHhHhcCcEeEEec-CCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEE
Q 045072 231 VYLWTLPMFHANGWSY-PWGMAAVGGTNVCLR-KFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHIL 306 (556)
Q Consensus 231 ~~~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~ 306 (556)
+++..+|++|.+++.. .+..+..|+..++.. +.++..+++.++++++|+++++|+++..+..... ...++++|.++
T Consensus 260 ~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~ 339 (562)
T PRK12492 260 VMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSALKLTN 339 (562)
T ss_pred EEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcccccccceeEEE
Confidence 6788999999999865 444556777666554 5689999999999999999999999999987654 34567999999
Q ss_pred EeCCCCcHHHHHHhH-hcCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCcee
Q 045072 307 TAGAPPPAAVLFRTE-SLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSV 385 (556)
Q Consensus 307 ~~g~~~~~~~~~~~~-~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~ 385 (556)
+||+++++++.+.+. .+++++++.||+||++.+++.+... .....+++|.|++++ +++|+|+ ++.++
T Consensus 340 ~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~----------~~~~~~~~G~p~~~~-~v~ivd~-~~~~~ 407 (562)
T PRK12492 340 SGGTALVKATAERWEQLTGCTIVEGYGLTETSPVASTNPYG----------ELARLGTVGIPVPGT-ALKVIDD-DGNEL 407 (562)
T ss_pred eccccCCHHHHHHHHHHhCCceeeccCccccCceeeecCCc----------ccccCCccceecCCC-EEEEECC-CCCCC
Confidence 999999999998887 5699999999999998766543211 111235789999998 9999998 78888
Q ss_pred cCCCCeeeEEEEecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhc
Q 045072 386 SHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYT 465 (556)
Q Consensus 386 ~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~ 465 (556)
+.+ +.|||+++|+.++.||+++++.+...|..++||+|||+|+++++|.+++.||.+|+|+.+|++|+|.+||..|.+
T Consensus 408 ~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~ 485 (562)
T PRK12492 408 PLG--ERGELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEIEDVVMA 485 (562)
T ss_pred CCC--CceEEEEeCCccccccccCchhhhhcccCCCceecCcEEEECCCCeEEEecccCCeEEECCEEECHHHHHHHHHh
Confidence 887 689999999999999999999998888778999999999999999999999999999999999999999999999
Q ss_pred CCCccccEEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHH
Q 045072 466 NPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREM 544 (556)
Q Consensus 466 ~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~ 544 (556)
+|.|.+++|++.+++..|+.++++++..+.. ...+++.++++++++.+++|..+.++++||+|++||++|++|+++
T Consensus 486 ~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~---~~~~~i~~~~~~~l~~~~~P~~i~~~~~~P~t~~GK~~r~~L~~~ 561 (562)
T PRK12492 486 HPKVANCAAIGVPDERSGEAVKLFVVARDPG---LSVEELKAYCKENFTGYKVPKHIVLRDSLPMTPVGKILRRELRDI 561 (562)
T ss_pred CCCeeEEEEEeccCCCCCceEEEEEEeCCCC---CCHHHHHHHHHHhcccccCCcEEEEeccCCCCCCCceeHHHHHhh
Confidence 9999999999999888888888888765432 467899999999999999999999999999999999999999875
No 68
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=2.9e-65 Score=543.62 Aligned_cols=506 Identities=17% Similarity=0.170 Sum_probs=391.0
Q ss_pred HHHHHHHHhcCCCCEEEECC--------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccc
Q 045072 18 GFLERAATVYGDCPSIIYNN--------LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGA 89 (556)
Q Consensus 18 ~~l~~~~~~~p~~~a~~~~~--------~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (556)
++|++++..+|+++|+++.+ +++||+||.+++.++|++|++.|+++||+|+++++|++++++++|||+++|+
T Consensus 179 ~~l~~~~~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via~LA~~~~Ga 258 (728)
T PLN03052 179 CCLTPKPSKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVIIYLAIILAGC 258 (728)
T ss_pred HHHHHHhccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCC
Confidence 45666556789999999865 3799999999999999999999999999999999999999999999999999
Q ss_pred eEeccCCCCCHHHHHHHHhccCCeEEEEeccch------hhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCC
Q 045072 90 ILNNINTRLDARTISVLLQHSESKLVLVDYQSR------NLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSN 163 (556)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (556)
+++|++|.++.+++.+++++++++++|+++... +......... ...++++....... .... ..
T Consensus 259 v~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~-----~~~~iv~~~~~~~~----~~~~--~~ 327 (728)
T PLN03052 259 VVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAK-----APKAIVLPADGKSV----RVKL--RE 327 (728)
T ss_pred EEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhc-----CCcEEEEeCCCCcc----cccc--cc
Confidence 999999999999999999999999999976532 1111211111 12333333211000 0000 00
Q ss_pred cccccccccccCCC----CCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChh
Q 045072 164 FCCTYESLVTKGDP----NFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMF 239 (556)
Q Consensus 164 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~ 239 (556)
....|++++..... ..........+++++|+|||||||.||||+++|.+++.........+++.++|++++..++.
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~d~~~~~~~l~ 407 (728)
T PLN03052 328 GDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDIVCWPTNLG 407 (728)
T ss_pred CCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCCcEEEECCCcH
Confidence 12345554433211 00011123468999999999999999999999998876655555556788999999999999
Q ss_pred hhhhchhhhHhHhcCcEeEEecC-CCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHH
Q 045072 240 HANGWSYPWGMAAVGGTNVCLRK-FDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAV 316 (556)
Q Consensus 240 ~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~ 316 (556)
|+.+...++.++..|+++++... .++..++++++++++|++.++|++++.+.+... ..+++++|.++++|++++++.
T Consensus 408 w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~Ge~l~~~~ 487 (728)
T PLN03052 408 WMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGSTGEASSVDD 487 (728)
T ss_pred HHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEecCCCCCHHH
Confidence 99987667789999999998863 456789999999999999999999999976542 456789999999999999988
Q ss_pred HHHhH-hcC-CeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeE
Q 045072 317 LFRTE-SLG-FLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGE 394 (556)
Q Consensus 317 ~~~~~-~~~-~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Ge 394 (556)
..++. .++ .++.+.||.||+++.+..... ......+++|.|.+++ +++|+|+ +|.+++.|..+.||
T Consensus 488 ~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~----------~~~~~~g~~g~p~~g~-~v~v~d~-~g~~v~~g~~~~GE 555 (728)
T PLN03052 488 YLWLMSRAGYKPIIEYCGGTELGGGFVTGSL----------LQPQAFAAFSTPAMGC-KLFILDD-SGNPYPDDAPCTGE 555 (728)
T ss_pred HHHHHHhcCCCCeEeeccChhhCcccccCCC----------CCCCCCCccccCCCCc-eEEEECC-CCCCCCCCCCceEE
Confidence 77766 334 579999999999764432210 0012246789999999 9999997 78898876423699
Q ss_pred EEEecCC--ccccccCCCCccccCcC------CCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHh-c
Q 045072 395 IVFRGGS--MMLGYLKDPNGTRKCMK------DDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLY-T 465 (556)
Q Consensus 395 l~i~~~~--~~~gy~~~~~~~~~~~~------~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~-~ 465 (556)
|++.++. ...+|+++.. ....|. +.+||+|||++++|+||++++.||+||+|+.+|.+|++.|||++|. .
T Consensus 556 L~v~~~~~~~~~~~~~~~~-~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~~ 634 (728)
T PLN03052 556 LALFPLMFGASSTLLNADH-YKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERVCNAA 634 (728)
T ss_pred EEEeCCCCCCCccccCchh-hhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHHHHHHHhc
Confidence 9998653 2345666532 222221 2349999999999999999999999999999999999999999995 7
Q ss_pred CCCccccEEEeecCCCCC-eeeEEEEEec--ccccCCCCHHH----HHHHHHhcCCCCcccceeEEecCCCCCCCCCccH
Q 045072 466 NPAVNEAAVVARPDEFWG-ETPCAFLSLK--AELEKKPTEKE----IIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKK 538 (556)
Q Consensus 466 ~~~i~~~~v~~~~~~~~g-~~~~~~v~~~--~~~~~~~~~~~----i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r 538 (556)
+|.|.+++|++.+++..| +.++++|+++ ++.. .+.++ +.+.+++++++++.|..++++++||+|++||++|
T Consensus 635 ~p~V~eaaVvg~~d~~~g~e~~~afVvl~~~~g~~--~~~~~L~~~i~~~i~~~l~~~~~p~~i~~v~~lP~T~sGKi~R 712 (728)
T PLN03052 635 DESVLETAAIGVPPPGGGPEQLVIAAVLKDPPGSN--PDLNELKKIFNSAIQKKLNPLFKVSAVVIVPSFPRTASNKVMR 712 (728)
T ss_pred CCCcceEEEEeeecCCCCcEEEEEEEEEecCCCCC--CCHHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCchHHHH
Confidence 999999999999988766 7899999987 3322 23344 4455677889999999999999999999999999
Q ss_pred HHHHHHHHHhc
Q 045072 539 FELREMAKAMG 549 (556)
Q Consensus 539 ~~l~~~~~~~~ 549 (556)
+.|++++.+..
T Consensus 713 r~Lr~~~~~~~ 723 (728)
T PLN03052 713 RVLRQQLAQEL 723 (728)
T ss_pred HHHHHHHHhhh
Confidence 99999987654
No 69
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.5e-65 Score=534.12 Aligned_cols=514 Identities=27% Similarity=0.351 Sum_probs=414.1
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccc
Q 045072 10 NSSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGA 89 (556)
Q Consensus 10 ~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (556)
+..+.++.+.|.++++++|+++|+++.++.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 19 ~~~~~~i~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~ 98 (557)
T PRK07059 19 ASQYPSLADLLEESFRQYADRPAFICMGKAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLRAGY 98 (557)
T ss_pred CCCCCCHHHHHHHHHHHcCCCceEEEcCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCe
Confidence 44457899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCC-----------CCCcc
Q 045072 90 ILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDND-----------NKSSQ 158 (556)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ 158 (556)
+++|++|..+.+++.++++.++++++|+++.....+........ ...++........... .....
T Consensus 99 ~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (557)
T PRK07059 99 VVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKTA----VKHVVVASMGDLLGFKGHIVNFVVRRVKKMVP 174 (557)
T ss_pred EEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcccC----CceeEEeccccccccccccccccccccccccc
Confidence 99999999999999999999999999998876655544433211 2233322211100000 00000
Q ss_pred ccCCCcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhc----CC---CCCCE
Q 045072 159 TVDSNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDW----SI---PKQPV 231 (556)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~----~~---~~~~~ 231 (556)
.........+.+.+..............++++++++|||||||.||+|.++|.+++.++......+ .. .....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (557)
T PRK07059 175 AWSLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPDQLN 254 (557)
T ss_pred ccCCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCCCcE
Confidence 111112223333333322222122235678999999999999999999999999876554332211 11 12346
Q ss_pred EEEecChhhhhhchh-hhHhHhcCcEeEEec-CCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEE
Q 045072 232 YLWTLPMFHANGWSY-PWGMAAVGGTNVCLR-KFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILT 307 (556)
Q Consensus 232 ~~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~ 307 (556)
+++.+|++|.+++.. .+.++..|++.++.+ +.++..+++.++++++|.+.++|.++..+..... ...+++++.++.
T Consensus 255 ~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~ 334 (557)
T PRK07059 255 FVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDFSKLIVANG 334 (557)
T ss_pred EEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCchhheEEEe
Confidence 788899999988654 566777888877766 4688999999999999999999999999987654 345678999999
Q ss_pred eCCCCcHHHHHHhH-hcCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceec
Q 045072 308 AGAPPPAAVLFRTE-SLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVS 386 (556)
Q Consensus 308 ~g~~~~~~~~~~~~-~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~ 386 (556)
||+++++.+.+++. .+++++++.||+||++.++..+... ......++|.|+++. +++|+|+ ++.+++
T Consensus 335 gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~----------~~~~~~~vG~p~~g~-~v~i~d~-~~~~~~ 402 (557)
T PRK07059 335 GGMAVQRPVAERWLEMTGCPITEGYGLSETSPVATCNPVD----------ATEFSGTIGLPLPST-EVSIRDD-DGNDLP 402 (557)
T ss_pred ccccCCHHHHHHHHHHhCCCeeeccccccccchhhcCCCC----------CCCcCCcccCccCCc-EEEEECC-CCCCCC
Confidence 99999999988877 5689999999999998765543211 112235889999998 9999997 688888
Q ss_pred CCCCeeeEEEEecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcC
Q 045072 387 HDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTN 466 (556)
Q Consensus 387 ~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~ 466 (556)
.+ +.|||+++|++++.||+++++.+...+..+|||+|||++++++||.+++.||.+|+++.+|++|+|.+||+.+.++
T Consensus 403 ~g--~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~~iE~~l~~~ 480 (557)
T PRK07059 403 LG--EPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNEIEEVVASH 480 (557)
T ss_pred CC--CceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcCCCcEEEecccccceEECCEEEcHHHHHHHHHhC
Confidence 87 6899999999999999999998888887799999999999999999999999999999999999999999999999
Q ss_pred CCccccEEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHH
Q 045072 467 PAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREM 544 (556)
Q Consensus 467 ~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~ 544 (556)
++|.+++|++.+++..|+.++++++..... ...+++.++++++++.++.|..+.+++++|+|++||++|+.|+++
T Consensus 481 ~~V~~~~v~~~~~~~~ge~~~~~v~~~~~~---~~~~~l~~~~~~~l~~~~~P~~i~~v~~~P~t~~GK~~r~~L~~~ 555 (557)
T PRK07059 481 PGVLEVAAVGVPDEHSGEAVKLFVVKKDPA---LTEEDVKAFCKERLTNYKRPKFVEFRTELPKTNVGKILRRELRDG 555 (557)
T ss_pred CceeEEEEEecccCCCCeeEEEEEEeCCCC---CCHHHHHHHHHHhcccccCCcEEEEeccCCCCcccceeHHHHHhh
Confidence 999999999999888888888888765422 567889999999999999999999999999999999999999865
No 70
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=1.2e-65 Score=591.34 Aligned_cols=518 Identities=19% Similarity=0.211 Sum_probs=407.4
Q ss_pred CCCHHHHHHHHHHhcCCCCEEEE---------CCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHH
Q 045072 13 PLTPLGFLERAATVYGDCPSIIY---------NNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFA 83 (556)
Q Consensus 13 ~~t~~~~l~~~~~~~p~~~a~~~---------~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA 83 (556)
..++.++|+++++.+|+++|+++ .++++||+||.++++++|.+|.+.|+++|++|+|+++|++++++++||
T Consensus 235 ~~~l~~~~~~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~lA 314 (1389)
T TIGR03443 235 RGAIHDIFADNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVAVMG 314 (1389)
T ss_pred cCcHHHHHHHHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHHHHH
Confidence 46899999999999999999986 347899999999999999999999999999999999999999999999
Q ss_pred hhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccch---hhHHHHHhc-CCCCCCCCCeEEEcCCCCCCCCCCCccc
Q 045072 84 IPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSR---NLVVEAISL-FPSDIKCPPLVLIADHTDHDNDNKSSQT 159 (556)
Q Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (556)
|+++|++++|++|.++.+++.++++.+++++++++.+.. ..+...... .......+.+. +.+...... ..
T Consensus 315 ~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~ 388 (1389)
T TIGR03443 315 VLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALA-LQDDGSLVG-----GS 388 (1389)
T ss_pred HHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEE-ecccccccc-----cc
Confidence 999999999999999999999999999999999876431 111111110 00000011111 111100000 00
Q ss_pred cCCCcccccccccccCC--CCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecC
Q 045072 160 VDSNFCCTYESLVTKGD--PNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLP 237 (556)
Q Consensus 160 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p 237 (556)
.. ....+.+.... ..........++++++++|||||||.||||+++|+++.+.+......+++.++|+++...|
T Consensus 389 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~ 464 (1389)
T TIGR03443 389 LE----GGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLSENDKFTMLSG 464 (1389)
T ss_pred cc----cccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEecC
Confidence 00 00000000000 0001111245689999999999999999999999999988877777888999999999999
Q ss_pred hhhhhhchhhhHhHhcCcEeEEecC---CCHHHHHHHHHHhCCcEEechhHHHHHHHcCCCCCCCCCCeEEEEeCCCCcH
Q 045072 238 MFHANGWSYPWGMAAVGGTNVCLRK---FDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPRSEPLRNPVHILTAGAPPPA 314 (556)
Q Consensus 238 l~~~~g~~~~~~~~~~g~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~l~~v~~~g~~~~~ 314 (556)
++|..++..++.++..|+++++.+. .++..+++.++++++|+++++|++++.+.... ...++++|.+++||+++++
T Consensus 465 ~~~d~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~-~~~~~~lr~~~~gGe~l~~ 543 (1389)
T TIGR03443 465 IAHDPIQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA-TTPIPSLHHAFFVGDILTK 543 (1389)
T ss_pred ceecchHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc-cccCCCccEEEEecccCCH
Confidence 9999888889999999999988764 46889999999999999999999999987543 3457899999999999999
Q ss_pred HHHHHhHhc--CCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCC-CceecCCCCe
Q 045072 315 AVLFRTESL--GFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSES-GLSVSHDGAS 391 (556)
Q Consensus 315 ~~~~~~~~~--~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~-~~~~~~~~~~ 391 (556)
....++.+. ++.+++.||+||++..+......................++|.+++++ ++.|+|+++ +.+++.| +
T Consensus 544 ~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~ivd~~~~~~~~~~G--~ 620 (1389)
T TIGR03443 544 RDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNV-QLLVVNRNDRTQTCGVG--E 620 (1389)
T ss_pred HHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCC-EEEEECCccCCCcCCCC--C
Confidence 998887754 789999999999987655432211100000000011235789999998 999999743 5677777 7
Q ss_pred eeEEEEecCCccccccCCCCccccCcC----------------------------CCCceecCceEEEecCCcEEEEccC
Q 045072 392 LGEIVFRGGSMMLGYLKDPNGTRKCMK----------------------------DDGWFYTGDVGVIHADGYLEIKDRS 443 (556)
Q Consensus 392 ~Gel~i~~~~~~~gy~~~~~~~~~~~~----------------------------~~~~~~TGD~~~~~~dg~l~~~GR~ 443 (556)
.|||+|+|+++++||+++|+.+..+|. .++||+|||+|++++||.+++.||.
T Consensus 621 ~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~l~~~GR~ 700 (1389)
T TIGR03443 621 VGEIYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGNVECCGRA 700 (1389)
T ss_pred ceEEEecccccchhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCceeEcCCCCEEEeccc
Confidence 899999999999999999998887773 2589999999999999999999999
Q ss_pred CCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEecccccC------------------------C
Q 045072 444 KDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEK------------------------K 499 (556)
Q Consensus 444 ~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~------------------------~ 499 (556)
||+||++|++|+|.+||..|.++|.|.+++|++.+++..+..++++++...+... .
T Consensus 701 dd~Iki~G~rI~p~eIE~~l~~~p~V~~a~v~~~~~~~~~~~lva~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 780 (1389)
T TIGR03443 701 DDQVKIRGFRIELGEIDTHLSQHPLVRENVTLVRRDKDEEPTLVSYIVPQDKSDELEEFKSEVDDEESSDPVVKGLIKYR 780 (1389)
T ss_pred CCEEEeCcEEecHHHHHHHHHhCcchheeEEEEeeCCCCCeEEEEEEeccCccccccccccccccccccccchhhhhhhh
Confidence 9999999999999999999999999999999998887777889999887622110 0
Q ss_pred CCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHH
Q 045072 500 PTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREM 544 (556)
Q Consensus 500 ~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~ 544 (556)
...+++.++++++++.|++|..++++++||+|++||++|++|++.
T Consensus 781 ~~~~~l~~~l~~~Lp~y~~P~~~~~~~~lP~t~~GKidr~~L~~~ 825 (1389)
T TIGR03443 781 KLIKDIREYLKKKLPSYAIPTVIVPLKKLPLNPNGKVDKPALPFP 825 (1389)
T ss_pred hhHHHHHHHHHhhCCcccCCceEEEcccCCCCCCccccHhhcCCC
Confidence 124678999999999999999999999999999999999999643
No 71
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=2.2e-66 Score=634.11 Aligned_cols=500 Identities=19% Similarity=0.222 Sum_probs=424.6
Q ss_pred CCccCCCCCCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHH
Q 045072 3 ELKPCTANSSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHF 82 (556)
Q Consensus 3 ~~~~~~~~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~l 82 (556)
|++.........++.++|.++++++|+++|+++.++++||+||.++++++|..|.+.|+++|++|+|+++|++++++++|
T Consensus 3084 ~~~~~~~~~~~~~~~~l~~~~a~~~p~~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~l 3163 (3956)
T PRK12467 3084 WNATAAAYPSERLVHQLIEAQVARTPEAPALVFGDQQLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALL 3163 (3956)
T ss_pred hccCCCCCCccccHHHHHHHHHHhCCCcceEeeCCcccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHH
Confidence 33333444455799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCC
Q 045072 83 AIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDS 162 (556)
Q Consensus 83 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (556)
||+++|++++|++|.++.+++.++++++++++++++....+.+... . ....+.++...
T Consensus 3164 avl~aGa~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~-------~-~~~~~~~~~~~-------------- 3221 (3956)
T PRK12467 3164 AVLKAGGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAP-------A-GDTALTLDRLD-------------- 3221 (3956)
T ss_pred HHHhhCcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccc-------c-CCceeeecchh--------------
Confidence 9999999999999999999999999999999999987653322110 0 11122221110
Q ss_pred CcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhh
Q 045072 163 NFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHAN 242 (556)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~ 242 (556)
. .......+.....++++++++|||||||.||||+++|+++.+.+......+++.++|+++...|++|..
T Consensus 3222 -----~-----~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~ 3291 (3956)
T PRK12467 3222 -----L-----NGYSENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYELDANDRVLLFMSFSFDG 3291 (3956)
T ss_pred -----h-----cccCCCCCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcCCCcCCEEEEecCccHhH
Confidence 0 000001111234678999999999999999999999999999888888888999999999999999999
Q ss_pred hchhhhHhHhcCcEeEEecC--CCHHHHHHHHHHhCCcEEechhHHHHHHHcCCCCCCCCCCeEEEEeCCCCcHHHHHHh
Q 045072 243 GWSYPWGMAAVGGTNVCLRK--FDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPRSEPLRNPVHILTAGAPPPAAVLFRT 320 (556)
Q Consensus 243 g~~~~~~~~~~g~~~~~~~~--~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~l~~v~~~g~~~~~~~~~~~ 320 (556)
+...++.++..|+++++.+. +++..+++.++++++|+++++|+++..+.+......++++|.+++|||++++++.+++
T Consensus 3292 ~~~~~~~~L~~G~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~lr~~~~gGe~~~~~~~~~~ 3371 (3956)
T PRK12467 3292 AQERFLWTLICGGCLVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAGGADCASLDIYVFGGEAVPPAAFEQV 3371 (3956)
T ss_pred HHHHHHHHHhCCCEEEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhcccccCCCCceEEEEecCCCCHHHHHHH
Confidence 98889999999999988875 7899999999999999999999999999876556678899999999999999999988
Q ss_pred Hh-c-CCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEe
Q 045072 321 ES-L-GFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFR 398 (556)
Q Consensus 321 ~~-~-~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~ 398 (556)
.+ + ++.+++.||+||++..++......+ ........++|+|+++. ++.|+|+ ++.+++.| +.|||+|+
T Consensus 3372 ~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~------~~~~~~~~~iG~p~~~~-~~~v~d~-~~~~vp~G--~~GEL~i~ 3441 (3956)
T PRK12467 3372 KRKLKPRGLTNGYGPTEAVVTVTLWKCGGD------AVCEAPYAPIGRPVAGR-SIYVLDG-QLNPVPVG--VAGELYIG 3441 (3956)
T ss_pred HHhCCCCEEEeCcccchhEeeeEEEecccc------cccCCCCCCCccccCCC-EEEEECC-CCCCCCCC--CCceEEEc
Confidence 74 3 6789999999999876654332111 11112235799999999 9999997 78999988 78999999
Q ss_pred cCCccccccCCCCccccCcCCC-------CceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccc
Q 045072 399 GGSMMLGYLKDPNGTRKCMKDD-------GWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNE 471 (556)
Q Consensus 399 ~~~~~~gy~~~~~~~~~~~~~~-------~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~ 471 (556)
|+++++||+++|+.+..+|..+ +||+|||+|++++||.+++.||.||+||++|++|++.|||+.|.++|+|.+
T Consensus 3442 G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rIe~~EIE~~l~~~p~V~~ 3521 (3956)
T PRK12467 3442 GVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLLQHPSVRE 3521 (3956)
T ss_pred chhhhhhccCCcccchhhccCCCCCCCCceeeccchhheecCCCcEEEeccccceEeeceEeecHHHHHHHHhhCcccce
Confidence 9999999999999999998654 469999999999999999999999999999999999999999999999999
Q ss_pred cEEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHH
Q 045072 472 AAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKA 547 (556)
Q Consensus 472 ~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 547 (556)
++|+.... ..|..++++|+...+.. ...+++.++++++++.|++|..++++++||+|++||++|++|++...+
T Consensus 3522 a~v~~~~~-~~~~~lva~v~~~~~~~--~~~~~l~~~l~~~Lp~y~vP~~~~~l~~lP~t~~GKidR~~L~~~~~~ 3594 (3956)
T PRK12467 3522 AVVLARDG-AGGKQLVAYVVPADPQG--DWRETLRDHLAASLPDYMVPAQLLVLAAMPLGPNGKVDRKALPDPDAK 3594 (3956)
T ss_pred EEEEEecC-CCCcEEEEEEeCCCCCc--ccHHHHHHHHhccCChhhCCCeeeeeccCCCCCCCccchhhcCCCCcc
Confidence 99998854 35778999998876533 567899999999999999999999999999999999999999876443
No 72
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.1e-65 Score=531.62 Aligned_cols=487 Identities=25% Similarity=0.349 Sum_probs=394.4
Q ss_pred CCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCChHHHHHHHHHhhhccceEe
Q 045072 14 LTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGI-TRGHVVSVVAPNIPAMYEAHFAIPFTGAILN 92 (556)
Q Consensus 14 ~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (556)
.|+.++|.+++ .|+++|+++.+.++||.||.++++++|.+|.+.|+ ++||+|+++++|+++++++++||+++|++++
T Consensus 3 ~~~~~~l~~~~--~p~~~Al~~~~~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~~v 80 (540)
T PRK13388 3 DTIAQLLRDRA--GDDTIAVRYGDRTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALGGYVLV 80 (540)
T ss_pred hhHHHHHHhhc--cCCceEEEECCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhCCCEEE
Confidence 57888887765 69999999999999999999999999999999999 8999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCccccccccc
Q 045072 93 NINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESLV 172 (556)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (556)
|++|.++.+++.+++++++++++|++++....+.+.. .+ ...++...+. .+.+++
T Consensus 81 ~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~--~~----~~~~i~~~~~-------------------~~~~~~ 135 (540)
T PRK13388 81 GLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLD--LP----GVRVLDVDTP-------------------AYAELV 135 (540)
T ss_pred EecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhc--cc----CceEEEccch-------------------hhhhhh
Confidence 9999999999999999999999999887655443321 11 1122222211 111222
Q ss_pred ccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchhhh-HhH
Q 045072 173 TKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSYPW-GMA 251 (556)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~-~~~ 251 (556)
...... .+.....++++++++|||||||.||+|.++|+++..........+++..+|+++..+|++|..++...+ .++
T Consensus 136 ~~~~~~-~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l 214 (540)
T PRK13388 136 AAAGAL-TPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWAPAV 214 (540)
T ss_pred ccccCc-CCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHHHHH
Confidence 111111 111124568999999999999999999999999988777777778899999999999999999887654 467
Q ss_pred hcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCCC--CCCCCCeEEEEeCCCCcHHHHHHhH-hcCCeEE
Q 045072 252 AVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPRS--EPLRNPVHILTAGAPPPAAVLFRTE-SLGFLVS 328 (556)
Q Consensus 252 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~--~~l~~l~~v~~~g~~~~~~~~~~~~-~~~~~l~ 328 (556)
..|+++++.+.+++..+++.++++++|++..+|..+..+...... .....++ +++ |++++++....+. .++++++
T Consensus 215 ~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~~~l~-~~~-G~~~~~~~~~~~~~~~~~~l~ 292 (540)
T PRK13388 215 ASGAAVALPAKFSASGFLDDVRRYGATYFNYVGKPLAYILATPERPDDADNPLR-VAF-GNEASPRDIAEFSRRFGCQVE 292 (540)
T ss_pred HcCcEEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCccccccceE-EEE-CCCCCHHHHHHHHHHhCCcee
Confidence 788888877778999999999999999999999999998866541 1223444 333 6666777777766 6689999
Q ss_pred ecccccccccceeeccccccccCCChhhhccccccCccccceeeeeE-----------EecCCCCceecCCCCeeeEEEE
Q 045072 329 HGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEID-----------VIDSESGLSVSHDGASLGEIVF 397 (556)
Q Consensus 329 ~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~-----------i~d~~~~~~~~~~~~~~Gel~i 397 (556)
+.||+||++.++.... ....+++|.|.+++ ++. ++|+ +|..+..++ ..|||++
T Consensus 293 ~~YG~tE~~~~~~~~~-------------~~~~~~vG~p~~g~-~i~~~~~~~~~~~~~~d~-~g~~~~~~~-~~GEl~v 356 (540)
T PRK13388 293 DGYGSSEGAVIVVREP-------------GTPPGSIGRGAPGV-AIYNPETLTECAVARFDA-HGALLNADE-AIGELVN 356 (540)
T ss_pred cccccccccceeecCC-------------CCCCCCCCCCCCCc-EEEcCCCCccccceeccC-ccccccCCC-cceEEEE
Confidence 9999999986654321 01235788888875 432 3332 344443222 5799999
Q ss_pred e-cCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEe
Q 045072 398 R-GGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVA 476 (556)
Q Consensus 398 ~-~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~ 476 (556)
+ |++++.||+++++.+...|. +|||+|||+|++++||++++.||.+|+|+.+|++|+|.+||+++.++|+|.+|+|++
T Consensus 357 ~~g~~~~~gY~~~~~~t~~~~~-~g~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~g 435 (540)
T PRK13388 357 TAGAGFFEGYYNNPEATAERMR-HGMYWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAAPIERILLRHPAINRVAVYA 435 (540)
T ss_pred ecCCcccccccCChHHHHHHhh-cCceeccceEEEcCCCcEEEeccCCceEEECCEEeCHHHHHHHHHhCCCceEEEEEE
Confidence 8 99999999999998888886 899999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhc--CCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHhc
Q 045072 477 RPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRAR--LPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMG 549 (556)
Q Consensus 477 ~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~--l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~~ 549 (556)
.+++..|+.+++++++.++.. .+.+++.++++.+ ++++++|..++++++||+|++||++|++|+++..+..
T Consensus 436 ~~~~~~g~~~~~~v~~~~~~~--~~~~~l~~~l~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~R~~L~~~~~~~~ 508 (540)
T PRK13388 436 VPDERVGDQVMAALVLRDGAT--FDPDAFAAFLAAQPDLGTKAWPRYVRIAADLPSTATNKVLKRELIAQGWATG 508 (540)
T ss_pred ccCCCCCceeEEEEEECCCCc--CCHHHHHHHHHhhccCCcccCCcEEEEeccCCCCCcceeeHHhHHHhccCCC
Confidence 998888888888888876544 5677888888764 9999999999999999999999999999999876553
No 73
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=3.6e-66 Score=519.34 Aligned_cols=509 Identities=27% Similarity=0.334 Sum_probs=392.3
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCEEEECC----ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhh
Q 045072 10 NSSPLTPLGFLERAATVYGDCPSIIYNN----LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIP 85 (556)
Q Consensus 10 ~~~~~t~~~~l~~~~~~~p~~~a~~~~~----~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~ 85 (556)
-....++..++.+.++.+|+.+++.... +.+||+|+.+++.++|.+|++.|+.+||+|+|++.|+++|+++.+||+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~~ 91 (613)
T COG1022 12 VAEIHTLPKRLAERVKDRPDGVALMYKELGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAIL 91 (613)
T ss_pred hhhcccHHHHHHHHhhcCCcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHH
Confidence 3445788999999999999998998653 789999999999999999999999779999999999999999999999
Q ss_pred hccceEeccCCCCCHHHHHHHHhccCCeEEEEeccc-hhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCC--CCCccccCC
Q 045072 86 FTGAILNNINTRLDARTISVLLQHSESKLVLVDYQS-RNLVVEAISLFPSDIKCPPLVLIADHTDHDND--NKSSQTVDS 162 (556)
Q Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 162 (556)
.+|++.||+.+..+++++.++|++++++++|++... .+.+.......+. ........+....... .........
T Consensus 92 ~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (613)
T COG1022 92 ALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPK---VVDLIVIIDLVREAVEAKALVLEVFPD 168 (613)
T ss_pred HcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccc---hhhhhhhhhhhhhccchhhcccccccc
Confidence 999999999999999999999999999999998844 4444444333221 0111111110000000 000000000
Q ss_pred CcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcC-CCCCCEEEEecChhhh
Q 045072 163 NFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWS-IPKQPVYLWTLPMFHA 241 (556)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~pl~~~ 241 (556)
.+...+ .+... .......+..++|+|.|+|||||||.||||++||+|+++++........ .+++|+.++.+|+.|.
T Consensus 169 ~~~~~~--~~~~~-~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~LsfLPlaHi 245 (613)
T COG1022 169 EGISLF--LIDSA-GLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSFLPLAHI 245 (613)
T ss_pred ccchhh--hhccc-ccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEeCcHHHH
Confidence 000101 01111 1111223567899999999999999999999999999999999999886 9999999999999999
Q ss_pred hhchhhhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--------------------------
Q 045072 242 NGWSYPWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR-------------------------- 295 (556)
Q Consensus 242 ~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~-------------------------- 295 (556)
+..++. ..+..++..+.....++..++..+++++||.++++|.+++.+.+...
T Consensus 246 ~Er~~~-~~~~~~~g~~~~~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~ 324 (613)
T COG1022 246 FERAFE-GGLALYGGVTVLFKEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKIS 324 (613)
T ss_pred HHHHHH-HHHHhhcceEEEecCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHH
Confidence 998875 33333444445556799999999999999999999999866543210
Q ss_pred -----------------------C-CCCCCCeEEEEeCCCCcHHHHHHhHhcCCeEEecccccccccceeeccccccccC
Q 045072 296 -----------------------S-EPLRNPVHILTAGAPPPAAVLFRTESLGFLVSHGYGLTETAGLVVSCAWKNKWNR 351 (556)
Q Consensus 296 -----------------------~-~~l~~l~~v~~~g~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~ 351 (556)
+ ....++|.+++||+++++++...++..|+++..+||+||++++++.+..
T Consensus 325 ~~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~lGi~i~eGYGlTEts~~~~v~~~------ 398 (613)
T COG1022 325 RALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSLGIPILEGYGLTETSAVVSVNPP------ 398 (613)
T ss_pred hhhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHcCCCeEEEecccccccceEEccc------
Confidence 0 1113789999999999999999999999999999999999998887532
Q ss_pred CChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccCCCCccccCcCCCCceecCceEEE
Q 045072 352 LPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVI 431 (556)
Q Consensus 352 ~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~ 431 (556)
.....+++|.|+|+. +++|.|. |||+|+||.+|+|||++|+.|.+.|.+||||+|||+|.+
T Consensus 399 -----~~~~~gtvG~p~p~~-evKI~d~-------------GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~ 459 (613)
T COG1022 399 -----DRFVLGTVGKPLPGI-EVKIADD-------------GEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGEL 459 (613)
T ss_pred -----cCcccCCcCCcCCCc-eEEEccC-------------ceEEEecchhcchhcCChHHHhhhccccCCcccCceeEE
Confidence 233457899999999 9999995 999999999999999999999999999999999999999
Q ss_pred ecCCcEEEEccCCCeEe-eCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEecccccC----------CC
Q 045072 432 HADGYLEIKDRSKDVII-SGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEK----------KP 500 (556)
Q Consensus 432 ~~dg~l~~~GR~~d~i~-~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~----------~~ 500 (556)
|++|+|++.||.+|.|+ .+|+.|.|+.||+.+.++|.|.+.+|++...+ .+.|+|+++.+.-. ..
T Consensus 460 d~~g~L~i~gRkK~~i~l~~GknIaP~~IE~~l~~~~~I~qi~vvg~~k~----~~~AlIvp~~~~l~~~a~~~~~~~~~ 535 (613)
T COG1022 460 DEDGYLVITGRKKELIKLSNGKNIAPEPIESKLAKSPLIEQICVVGDDKK----FLVALIVPDFDALEKWAESLNKVISA 535 (613)
T ss_pred cCCCcEEEeecccceEECCCCcccChHHHHHHHhcCCCeeEEEEEecCCc----ceEEEEeCCHHHHHHHHHhccccccC
Confidence 99999999999999999 89999999999999999999999999994333 47888888764311 00
Q ss_pred CHH------HHH----HHHHh---cCCCCcccceeEEec-CC-----CCCCCCCccHHHHHHHHHHhcccccc
Q 045072 501 TEK------EII----EYCRA---RLPRYMVPKTVVFKE-EL-----PKTSTGKIKKFELREMAKAMGKSKVS 554 (556)
Q Consensus 501 ~~~------~i~----~~l~~---~l~~~~~p~~~~~v~-~l-----P~t~~GKv~r~~l~~~~~~~~~~~~~ 554 (556)
+.+ ++. +.+.+ ....+.....+.+.+ ++ -.|++-|++|..+.+.+.+.++..|+
T Consensus 536 ~~~~l~~~~~l~~~~~~~i~~~~~~~~~~E~i~~~~~~~~~~t~~~~~~t~t~klkR~~i~~~~~~~i~~~y~ 608 (613)
T COG1022 536 SREELARDPKLLKLILPRVNKGNKRLFGFEQIKKFVLLPKEFTPENGELTPTLKLKRHVILDRYKDEIEAVYS 608 (613)
T ss_pred CHHHHhhCHHHHHHHHHHHHHHhhcccchhhhheeeecccccccccCccccchhhhHHHHHHhhhhHHHHHhh
Confidence 111 111 22211 223344444455543 33 37899999999999999988776654
No 74
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3e-64 Score=529.70 Aligned_cols=522 Identities=24% Similarity=0.297 Sum_probs=418.4
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 045072 11 SSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAI 90 (556)
Q Consensus 11 ~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (556)
.+..++.+.|+++++.+|+++|+.+.++.+||.||.+++.++|.+|.+.|+++|++|+++++|+++++++++||+++|++
T Consensus 30 ~~~~~l~~~l~~~a~~~p~~~al~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 109 (567)
T PRK06178 30 HGERPLTEYLRAWARERPQRPAIIFYGHVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFHIVFFGILKLGAV 109 (567)
T ss_pred cCcccHHHHHHHHHHHCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHHHHHHHHHHhCeE
Confidence 44578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCC-----Ccc
Q 045072 91 LNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDS-----NFC 165 (556)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 165 (556)
++|++|..+..++.++++.++++++++++...+.+.+...... ...++......... .......... ...
T Consensus 110 ~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~~----~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 184 (567)
T PRK06178 110 HVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAETS----LRHVIVTSLADVLP-AEPTLPLPDSLRAPRLAA 184 (567)
T ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccCC----cceEEEeccccccc-cccccccccccccccccc
Confidence 9999999999999999999999999999888777665543321 23333332111100 0000000000 000
Q ss_pred cccccccccCC--CCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhh-hcCCCCCCEEEEecChhhhh
Q 045072 166 CTYESLVTKGD--PNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLI-DWSIPKQPVYLWTLPMFHAN 242 (556)
Q Consensus 166 ~~~~~~~~~~~--~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~pl~~~~ 242 (556)
..+.+++.... .......+..++++++++|||||||.||+|.++|.++......... .......++++..+|++|.+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~ 264 (567)
T PRK06178 185 AGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVVGGEDSVFLSFLPEFWIA 264 (567)
T ss_pred cccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhccCCCCcEEEEecchHHHH
Confidence 01111111110 1111112345789999999999999999999999998776544333 35678899999999999999
Q ss_pred hch-hhhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEE--eCCCCcHHHH
Q 045072 243 GWS-YPWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILT--AGAPPPAAVL 317 (556)
Q Consensus 243 g~~-~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~--~g~~~~~~~~ 317 (556)
|+. .++.++..|+++++.+++++..++..++++++|.++++|..+..+..... ...+++++.+.. .++.++++..
T Consensus 265 g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 344 (567)
T PRK06178 265 GENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLSSLRQVRVVSFVKKLNPDYR 344 (567)
T ss_pred HHHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcchheeeeeccccccCCHHHH
Confidence 975 46778899999999988999999999999999999999999988876543 334567777654 3589999999
Q ss_pred HHhH-hcCCeEEe-cccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEE
Q 045072 318 FRTE-SLGFLVSH-GYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEI 395 (556)
Q Consensus 318 ~~~~-~~~~~l~~-~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel 395 (556)
+.++ .++..++. .||+||++..+........ . .........++|.|++++ +++|+|++++.+++.+ +.|||
T Consensus 345 ~~~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~-~---~~~~~~~~~~vG~p~~g~-~v~v~d~~~~~~~~~g--~~Gel 417 (567)
T PRK06178 345 QRWRALTGSVLAEAAWGMTETHTCDTFTAGFQD-D---DFDLLSQPVFVGLPVPGT-EFKICDFETGELLPLG--AEGEI 417 (567)
T ss_pred HHHHHHhCCcccccccccccccccceecccccc-C---ccccccCCcccccccCCc-EEEEEcCCCCCcCCCC--CceEE
Confidence 9887 45766664 7999998765433211000 0 000112345789999999 9999997789999888 68999
Q ss_pred EEecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEE
Q 045072 396 VFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVV 475 (556)
Q Consensus 396 ~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~ 475 (556)
+++|++++.||+++++.+...+. +|||+|||++++++||++++.||.+|+|+.+|++|+|.+||+.+.++++|.+++|+
T Consensus 418 ~v~g~~v~~gY~~~~~~~~~~~~-dg~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~eiE~~l~~~~~v~~~~v~ 496 (567)
T PRK06178 418 VVRTPSLLKGYWNKPEATAEALR-DGWLHTGDIGKIDEQGFLHYLGRRKEMLKVNGMSVFPSEVEALLGQHPAVLGSAVV 496 (567)
T ss_pred EEECCcccccccCChhhhhhccc-CCceeecceEEEecCCeEEEEecccccEEECCEEECHHHHHHHHHhCCCeeEEEEE
Confidence 99999999999999998888887 89999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHh
Q 045072 476 ARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAM 548 (556)
Q Consensus 476 ~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 548 (556)
+.+++..|+.++++|+..+... .+.+++.+.++++++++++|. +.+++++|+|++||++|++|++++++.
T Consensus 497 ~~~~~~~g~~~~~~v~~~~~~~--~~~~~l~~~~~~~l~~~~~p~-i~~v~~iP~t~~GKv~r~~l~~~~~~~ 566 (567)
T PRK06178 497 GRPDPDKGQVPVAFVQLKPGAD--LTAAALQAWCRENMAVYKVPE-IRIVDALPMTATGKVRKQDLQALAEEL 566 (567)
T ss_pred cCcCcccCcceEEEEEeCCCCc--CCHHHHHHHHHhcCcccCCce-EEEeccCCCCCccceeHHHHHHHHHhh
Confidence 9998878888999888876543 578899999999999999996 888999999999999999999998765
No 75
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.1e-64 Score=532.50 Aligned_cols=518 Identities=29% Similarity=0.409 Sum_probs=415.4
Q ss_pred CCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEec
Q 045072 14 LTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNN 93 (556)
Q Consensus 14 ~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 93 (556)
+++.+.+.+.++.+|+++|+++.++.+||+||.+++.++|.+|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 24 ~~~~~~~~~~a~~~p~~~a~~~~~~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vp 103 (563)
T PRK06710 24 QPLHKYVEQMASRYPEKKALHFLGKDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLAGGIVVQ 103 (563)
T ss_pred ccHHHHHHHHHHHCCCceEEEecCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHcCeEEec
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCC-CCCCCC------------CCcccc
Q 045072 94 INTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHT-DHDNDN------------KSSQTV 160 (556)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------------~~~~~~ 160 (556)
++|..+.+++.++++.++++++++++............. ....++...... ...... ......
T Consensus 104 i~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (563)
T PRK06710 104 TNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSAT----KIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVVKVS 179 (563)
T ss_pred cCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhh----ccceeEEeccccccccccccccchhhccccccccccc
Confidence 999999999999999999999999886544333221110 012222211000 000000 000000
Q ss_pred CCCcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhh-hcCCC-CCCEEEEecCh
Q 045072 161 DSNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLI-DWSIP-KQPVYLWTLPM 238 (556)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~-~~~~~-~~~~~~~~~pl 238 (556)
.......++........... ......+++++++|||||||.||+|.++|+++..+...... .+... ..+++++.+|+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~ 258 (563)
T PRK06710 180 ESETIHLWNSVEKEVNTGVE-VPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLGVLPF 258 (563)
T ss_pred ccchhhhhhhhhhccccccc-cccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceEEEeCch
Confidence 00000011111111111000 11123568999999999999999999999998755433322 22333 45678999999
Q ss_pred hhhhhchh-hhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHH
Q 045072 239 FHANGWSY-PWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAA 315 (556)
Q Consensus 239 ~~~~g~~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~ 315 (556)
+|.+++.. ++.++..|+++++.+++++..+++.++++++|++.++|+++..+.+... ...++++|.+++||++++++
T Consensus 259 ~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~v~~gg~~~~~~ 338 (563)
T PRK06710 259 FHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRACISGSAPLPVE 338 (563)
T ss_pred HHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhheeeCCCcCCHH
Confidence 99988765 4567788999998888999999999999999999999999999987543 34567899999999999999
Q ss_pred HHHHhH-hcCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeE
Q 045072 316 VLFRTE-SLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGE 394 (556)
Q Consensus 316 ~~~~~~-~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Ge 394 (556)
+..++. .++..+++.||+||++.++..... ......+++|.+.++. .++|+|++++.+++.+ +.||
T Consensus 339 ~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~----------~~~~~~~~~G~~~~~~-~~~i~~~~~~~~~~~g--~~Ge 405 (563)
T PRK06710 339 VQEKFETVTGGKLVEGYGLTESSPVTHSNFL----------WEKRVPGSIGVPWPDT-EAMIMSLETGEALPPG--EIGE 405 (563)
T ss_pred HHHHHHHhhCCCEecccccccCccccccCcc----------cccccCCccCCCCCCC-eEEEEECCCCccCCCC--CceE
Confidence 999887 468999999999999876543211 0112235789999998 8999997788899888 6799
Q ss_pred EEEecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEE
Q 045072 395 IVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAV 474 (556)
Q Consensus 395 l~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v 474 (556)
|+++|+.++.||+++++.+...+. +|||+|||+++++++|.+++.||.+|+|+.+|.+|+|.+||+.|.++|.|.+++|
T Consensus 406 l~v~g~~~~~gY~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~eiE~~l~~~~~v~~~~v 484 (563)
T PRK06710 406 IVVKGPQIMKGYWNKPEETAAVLQ-DGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVT 484 (563)
T ss_pred EEEecCccchhhhCChHHHhhhcc-cCcccccceEEEcCCCcEEEeeccccEEEECCEEECHHHHHHHHHhCcceeeEEE
Confidence 999999999999999998887777 8999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHhcccc
Q 045072 475 VARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMGKSK 552 (556)
Q Consensus 475 ~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~~~~~ 552 (556)
++.+++..|+.++++++..++.. .+.+++.++++++++.+++|..+.++++||+|++||++|++|++++..+.+.+
T Consensus 485 ~~~~~~~~g~~~~~~v~~~~~~~--~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKi~r~~L~~~~~~~~~~~ 560 (563)
T PRK06710 485 IGVPDPYRGETVKAFVVLKEGTE--CSEEELNQFARKYLAAYKVPKVYEFRDELPKTTVGKILRRVLIEEEKRKNEDE 560 (563)
T ss_pred EccccCCcCceeEEEEEECCCCC--CCHHHHHHHHHHhcccccCCcEEEEcccCCCCccchhhHHHHHHHHhhcCccc
Confidence 99999888888889888777644 57889999999999999999999999999999999999999999998877654
No 76
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.2e-64 Score=526.63 Aligned_cols=476 Identities=26% Similarity=0.336 Sum_probs=400.7
Q ss_pred CCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceE
Q 045072 12 SPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAIL 91 (556)
Q Consensus 12 ~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 91 (556)
++.++.+.|.++++.+|+++|+.+.++.+||.||.++++++|.+|++.|+++||+|+++++|++++++++|||+++|+++
T Consensus 33 ~~~~~~~~~~~~a~~~p~~~a~~~~~~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~v~ 112 (516)
T PRK13383 33 GGTNPYTLLAVTAARWPGRTAIIDDDGALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLGADV 112 (516)
T ss_pred cCCcHHHHHHHHHHHCCCCcEEEeCCCcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEE
Confidence 57889999999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccccc
Q 045072 92 NNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESL 171 (556)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (556)
+|+++.++.+++.++++.++++.++++++..+.+.... ..++.+.... ....+
T Consensus 113 vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~---------~~~~~~~~~~-----------------~~~~~- 165 (516)
T PRK13383 113 VPISTEFRSDALAAALRAHHISTVVADNEFAERIAGAD---------DAVAVIDPAT-----------------AGAEE- 165 (516)
T ss_pred EEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhh---------cceEEeccch-----------------hhhhc-
Confidence 99999999999999999999999999887655433221 1122221110 00000
Q ss_pred cccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHH--HHHhhhhhhcCCCCCCEEEEecChhhhhhchhhhH
Q 045072 172 VTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIF--VMTVDSLIDWSIPKQPVYLWTLPMFHANGWSYPWG 249 (556)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~ 249 (556)
. ...+...++.++++|||||||.||+|.++|.... .........+++..+++++..+|++|.+|+...+.
T Consensus 166 ----~----~~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~ 237 (516)
T PRK13383 166 ----S----GGRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLGMLML 237 (516)
T ss_pred ----C----CCCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHHHHHH
Confidence 0 0011223467799999999999999999997432 11222233456788999999999999999988888
Q ss_pred hHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC----CCCCCCCeEEEEeCCCCcHHHHHHhH-hcC
Q 045072 250 MAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR----SEPLRNPVHILTAGAPPPAAVLFRTE-SLG 324 (556)
Q Consensus 250 ~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----~~~l~~l~~v~~~g~~~~~~~~~~~~-~~~ 324 (556)
++..|+++++...+++..+++.++++++|.+.++|+++..+.+... ...++++|.+++||+++++++.+++. .++
T Consensus 238 ~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~g 317 (516)
T PRK13383 238 TIALGGTVLTHRHFDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTYG 317 (516)
T ss_pred HHhcCCEEEECCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHcC
Confidence 8899999988888999999999999999999999999999986543 23567899999999999999999888 578
Q ss_pred CeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccc
Q 045072 325 FLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMML 404 (556)
Q Consensus 325 ~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~ 404 (556)
..+++.||+||++..+..+.. .......++|.+.++. .++|+|+ ++.+++.+ +.|||+++|+.++.
T Consensus 318 ~~v~~~YG~tE~~~~~~~~~~----------~~~~~~~~~G~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~g~~~~~ 383 (516)
T PRK13383 318 DILYNGYGSTEVGIGALATPA----------DLRDAPETVGKPVAGC-PVRILDR-NNRPVGPR--VTGRIFVGGELAGT 383 (516)
T ss_pred chhhhcccccccccceecccc----------ccccCCCcccCCCCCc-EEEEECC-CCCCCCCC--CceEEEEecCcccc
Confidence 899999999999865443211 0112346789999999 9999997 68888887 68999999999999
Q ss_pred cccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCe
Q 045072 405 GYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGE 484 (556)
Q Consensus 405 gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~ 484 (556)
||++++.. .+. +|||+|||+|++|++|++++.||.+|+|+.+|++|+|.+||..|.++|.|.++++++.+++..|+
T Consensus 384 ~Y~~~~~~---~~~-~g~~~TGDl~~~d~~G~l~i~GR~~~~i~~~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~g~ 459 (516)
T PRK13383 384 RYTDGGGK---AVV-DGMTSTGDMGYLDNAGRLFIVGREDDMIISGGENVYPRAVENALAAHPAVADNAVIGVPDERFGH 459 (516)
T ss_pred cccCCchh---hee-cCceecceeEEEcCCccEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCc
Confidence 99987642 233 89999999999999999999999999999999999999999999999999999999999888888
Q ss_pred eeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHH
Q 045072 485 TPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELR 542 (556)
Q Consensus 485 ~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~ 542 (556)
.+.++|+..+... ...+++.+++++++++++.|..++++++||+|++||++|++|+
T Consensus 460 ~~~~~v~~~~~~~--~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gKi~r~~L~ 515 (516)
T PRK13383 460 RLAAFVVLHPGSG--VDAAQLRDYLKDRVSRFEQPRDINIVSSIPRNPTGKVLRKELP 515 (516)
T ss_pred eEEEEEEECCCCC--CCHHHHHHHHHHhcccCCCCcEEEEeCCCCCCCCCcCcHHHhC
Confidence 9999998876543 5678999999999999999999999999999999999999874
No 77
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=1.8e-64 Score=530.81 Aligned_cols=511 Identities=24% Similarity=0.317 Sum_probs=411.3
Q ss_pred CCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCChHHHHHHHHHhhhccceE
Q 045072 13 PLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLS-SIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAIL 91 (556)
Q Consensus 13 ~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~-~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 91 (556)
..++.+.|.++++.+|+++|+++.++.+||.||.++++++|..|. +.|+++||+|+++++|++++++++|||+++|+++
T Consensus 24 ~~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 103 (560)
T PRK08751 24 FRTVAEVFATSVAKFADRPAYHSFGKTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLTV 103 (560)
T ss_pred CCcHHHHHHHHHHhCCCCceEEECCceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEE
Confidence 367899999999999999999999999999999999999999997 5899999999999999999999999999999999
Q ss_pred eccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCC-CC-----------CCCccc
Q 045072 92 NNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHD-ND-----------NKSSQT 159 (556)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----------~~~~~~ 159 (556)
++++|.++.+++.++++.++++++++++.....+.......+ ...++.+....... .. ....+.
T Consensus 104 v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (560)
T PRK08751 104 VNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTP----VKQVITTGLGDMLGFPKAALVNFVVKYVKKLVPE 179 (560)
T ss_pred eccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCC----ccEEEEechhhhcccccchhhhhhhhhhhccccc
Confidence 999999999999999999999999999887666555443322 22232221100000 00 000000
Q ss_pred cCCCcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcC----CCC-CCEEEE
Q 045072 160 VDSNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWS----IPK-QPVYLW 234 (556)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~----~~~-~~~~~~ 234 (556)
...+....+.+.+...............+++++++|||||||.||+|.++|.++..........+. +.. .++++.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (560)
T PRK08751 180 YRINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEVVIT 259 (560)
T ss_pred cCCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCceEEE
Confidence 001111222332222211111122345689999999999999999999999999876665444332 333 356788
Q ss_pred ecChhhhhhchh-hhHhHhcCcEeEEec-CCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCC
Q 045072 235 TLPMFHANGWSY-PWGMAAVGGTNVCLR-KFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGA 310 (556)
Q Consensus 235 ~~pl~~~~g~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~ 310 (556)
.+|++|.+++.. .+..+..|++.+++. +.++..+++.++++++|++.++|.++..+.+... ...++++|.+++||+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~v~~gG~ 339 (560)
T PRK08751 260 ALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKMTLGGGM 339 (560)
T ss_pred ecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcchhhheeeeeCCC
Confidence 899999998764 455666777776655 5789999999999999999999999999987654 345679999999999
Q ss_pred CCcHHHHHHhH-hcCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCC
Q 045072 311 PPPAAVLFRTE-SLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDG 389 (556)
Q Consensus 311 ~~~~~~~~~~~-~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~ 389 (556)
+++..+.+.+. .+++.+++.||+||+++.++.+... .....+++|.+.++. .++|+|+ ++.+++.+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~----------~~~~~~~vG~~~~~~-~v~i~d~-~~~~~~~g- 406 (560)
T PRK08751 340 AVQRSVAERWKQVTGLTLVEAYGLTETSPAACINPLT----------LKEYNGSIGLPIPST-DACIKDD-AGTVLAIG- 406 (560)
T ss_pred CCCHHHHHHHHHHhCCeEEEeeccccCCCceeccccc----------ccccCCCcCccCCCc-eEEEECC-CCCCCCCC-
Confidence 99999998888 4588999999999998765543211 111235789999998 9999996 78888887
Q ss_pred CeeeEEEEecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCc
Q 045072 390 ASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAV 469 (556)
Q Consensus 390 ~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i 469 (556)
+.|||+++|+.++.||+++++.+...|..+|||+|||+|+++++|.+++.||.+|+|+.+|++|+|.+||+.|..+++|
T Consensus 407 -~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~eiE~~l~~~~~v 485 (560)
T PRK08751 407 -EIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEIEDVIAMMPGV 485 (560)
T ss_pred -CceEEEEecCccchhhcCChhhhhhccccCCCccccceEEEcCCceEEEEeechhheeECCEEEcHHHHHHHHHhCcCe
Confidence 6899999999999999999999988888789999999999999999999999999999999999999999999999999
Q ss_pred cccEEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHH
Q 045072 470 NEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREM 544 (556)
Q Consensus 470 ~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~ 544 (556)
.+++|++.+++..|+.+.++++.... . ...+++.++++++++++++|..++++++||+|++||++|++|++.
T Consensus 486 ~~~~v~~~~~~~~ge~~~~~v~~~~~-~--~~~~~l~~~~~~~l~~~~~P~~v~~v~~lP~t~~gKv~r~~L~~~ 557 (560)
T PRK08751 486 LEVAAVGVPDEKSGEIVKVVIVKKDP-A--LTAEDVKAHARANLTGYKQPRIIEFRKELPKTNVGKILRRELRDA 557 (560)
T ss_pred eeeEEEecCCCCCCceEEEEEEcCCC-C--CCHHHHHHHHHHhhhhccCCeEEEEhhhCCCCccccccHHHHHHh
Confidence 99999999988778877777765432 2 467899999999999999999999999999999999999999876
No 78
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=3.2e-65 Score=540.10 Aligned_cols=503 Identities=22% Similarity=0.299 Sum_probs=394.8
Q ss_pred CCCHHHHHHHHHHhcCCCCEEEECC---------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHH
Q 045072 13 PLTPLGFLERAATVYGDCPSIIYNN---------LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFA 83 (556)
Q Consensus 13 ~~t~~~~l~~~~~~~p~~~a~~~~~---------~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA 83 (556)
..|+.++++++++++|+++|+++.+ +.+||+||.++++++|++|.+. +++||+|+++++|++++++++||
T Consensus 33 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~~lA 111 (612)
T PRK12476 33 GTTLISLIERNIANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAGFFA 111 (612)
T ss_pred cCcHHHHHHHHHHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHHHHH
Confidence 4689999999999999999998732 4799999999999999999986 99999999999999999999999
Q ss_pred hhhccceEecc-CCCCC--HHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCcccc
Q 045072 84 IPFTGAILNNI-NTRLD--ARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTV 160 (556)
Q Consensus 84 ~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (556)
|+++|++++|+ ++.++ .+++.+++++++++++|++++..+.+.......... ....++.+++...
T Consensus 112 ~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~----------- 179 (612)
T PRK12476 112 AIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRL-RRPRVIAIDAIPD----------- 179 (612)
T ss_pred HHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccc-cCceEEEeccccc-----------
Confidence 99999999999 57766 789999999999999999887766554443322210 0123333321100
Q ss_pred CCCcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcC-CCCCCEEEEecChh
Q 045072 161 DSNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWS-IPKQPVYLWTLPMF 239 (556)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~pl~ 239 (556)
....... ..+..++++++++|||||||.||||.++|+++..++......++ +.++++.++.+|++
T Consensus 180 -------------~~~~~~~-~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~Pl~ 245 (612)
T PRK12476 180 -------------SAGESFV-PVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWLPLY 245 (612)
T ss_pred -------------ccccccc-CCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeCCcc
Confidence 0000000 11235679999999999999999999999999877666555566 68889999999999
Q ss_pred hhhhchhhhHhHhcCcEeEEecC--C--CHHHHHHHHH--HhCCcEEechhHHHHHHHcCC------CCCCCCCCeEEEE
Q 045072 240 HANGWSYPWGMAAVGGTNVCLRK--F--DAAVIYKMIR--QHGVTHMCGAPVVLNMISNLP------RSEPLRNPVHILT 307 (556)
Q Consensus 240 ~~~g~~~~~~~~~~g~~~~~~~~--~--~~~~~~~~i~--~~~~t~~~~~p~~~~~l~~~~------~~~~l~~l~~v~~ 307 (556)
|..|+...+.+++.|++.+++.+ + ++..+++.++ +++++.++.+|.++..+.... ....++++| +++
T Consensus 246 h~~g~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr-~~~ 324 (612)
T PRK12476 246 HDMGLSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV-LII 324 (612)
T ss_pred cccchHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe-EEe
Confidence 99999877777777887777653 3 8899999995 589999999999887776531 133578899 999
Q ss_pred eCCCCcHHHHHHhHh-c---CC---eEEecccccccccceeeccccccc-----cC----------CC-hhhhccccccC
Q 045072 308 AGAPPPAAVLFRTES-L---GF---LVSHGYGLTETAGLVVSCAWKNKW-----NR----------LP-ATERARMKSRQ 364 (556)
Q Consensus 308 ~g~~~~~~~~~~~~~-~---~~---~l~~~yG~tE~~~~~~~~~~~~~~-----~~----------~~-~~~~~~~~~~~ 364 (556)
||+++++++.+++.+ + |+ .+++.||+||++..+......... .. .. ........+++
T Consensus 325 gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 404 (612)
T PRK12476 325 GSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSC 404 (612)
T ss_pred cccCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeC
Confidence 999999999988874 3 43 489999999987654332111000 00 00 00000122478
Q ss_pred ccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccCCCCccccCcC------------------CCCceecC
Q 045072 365 GVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMK------------------DDGWFYTG 426 (556)
Q Consensus 365 G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~------------------~~~~~~TG 426 (556)
|.|+++. +++|+|++++.+++.+ +.|||+++|++++.|||++|+.+...|. +++||+||
T Consensus 405 G~~~~g~-~v~ivd~~~g~~~~~g--~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TG 481 (612)
T PRK12476 405 GQVARSQ-WAVIVDPDTGAELPDG--EVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTG 481 (612)
T ss_pred CCcCCCC-EEEEEeCCCCcCCCCC--CEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeecc
Confidence 9999999 9999998669999888 7899999999999999999998877764 13599999
Q ss_pred ceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhc-CCCccc--cEEEeecCCCCCeeeEEEEEecccccCCCCHH
Q 045072 427 DVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYT-NPAVNE--AAVVARPDEFWGETPCAFLSLKAELEKKPTEK 503 (556)
Q Consensus 427 D~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~-~~~i~~--~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~ 503 (556)
|+|+++ ||++++.||++|+||.+|++|+|.+||+.|.+ ||.|.+ ++|++.+++. ++.++++|+..++.. ..+.+
T Consensus 482 Dlg~~~-dG~l~i~GR~~d~I~~~G~~I~p~eIE~~l~~~~p~V~~~~v~v~~~~~~~-~~~~~~~v~~~~~~~-~~~~~ 558 (612)
T PRK12476 482 DLGVYL-DGELYITGRIADLIVIDGRNHYPQDIEATVAEASPMVRRGYVTAFTVPAED-NERLVIVAERAAGTS-RADPA 558 (612)
T ss_pred ccceeE-CCEEEEEeccCcEEEECCcccCHHHHHHHHHHhcccccCCcEEEEEecCCC-cceEEEEEEecCCcc-cccHH
Confidence 999985 99999999999999999999999999999985 899999 6777877776 788888888776532 13567
Q ss_pred HHHHHHHhcCC-CCcc-cceeEEec--CCCCCCCCCccHHHHHHHHHHhc
Q 045072 504 EIIEYCRARLP-RYMV-PKTVVFKE--ELPKTSTGKIKKFELREMAKAMG 549 (556)
Q Consensus 504 ~i~~~l~~~l~-~~~~-p~~~~~v~--~lP~t~~GKv~r~~l~~~~~~~~ 549 (556)
++.+++++++. .+++ |..+.+++ +||+|++||++|++|+++|.+..
T Consensus 559 ~l~~~~~~~l~~~~~~~p~~v~~v~~~~lP~t~~GKi~r~~L~~~~~~~~ 608 (612)
T PRK12476 559 PAIDAIRAAVSRRHGLAVADVRLVPAGAIPRTTSGKLARRACRAQYLDGR 608 (612)
T ss_pred HHHHHHHHHHHHhhCCcceEEEEECCCCcCcCCchHHHHHHHHHHHHcCC
Confidence 88888888876 4776 57788886 69999999999999999986653
No 79
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=2.3e-65 Score=532.10 Aligned_cols=484 Identities=22% Similarity=0.267 Sum_probs=377.8
Q ss_pred HHHHHHHHHHhcCCCCEEEECC----ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceE
Q 045072 16 PLGFLERAATVYGDCPSIIYNN----LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAIL 91 (556)
Q Consensus 16 ~~~~l~~~~~~~p~~~a~~~~~----~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 91 (556)
+.+.|+++++++|+++|+++.+ +++||+||.++++++|.+|.++ ++||+|+|+++|++++++++|||+++|+++
T Consensus 4 ~~~~l~~~~~~~~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~~~G~~~ 81 (525)
T PRK05851 4 LAAALSDAMTASGRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAWLAGAAV 81 (525)
T ss_pred HHHHHHHHhcCCCCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHHHcCCCC
Confidence 7789999999999999999886 7899999999999999999998 899999999999999999999999999986
Q ss_pred eccCCC--------CCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCC
Q 045072 92 NNINTR--------LDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSN 163 (556)
Q Consensus 92 v~l~~~--------~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (556)
+++ |. ...+++.++++++++++++++.+....+...... +...+..
T Consensus 82 ~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~----------~~~~~~~--------------- 135 (525)
T PRK05851 82 SIL-PGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSS----------VTVHDLA--------------- 135 (525)
T ss_pred cCC-CCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhcc----------ccccccc---------------
Confidence 543 32 2235556778999999999987665443332110 0000000
Q ss_pred cccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCC-CCCEEEEecChhhhh
Q 045072 164 FCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIP-KQPVYLWTLPMFHAN 242 (556)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~pl~~~~ 242 (556)
........ ....+..++++++++|||||||.||||.++|+++...+......+++. .+|++++.+|++|.+
T Consensus 136 ------~~~~~~~~--~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~ 207 (525)
T PRK05851 136 ------TAAHTNRS--ASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPLYHDM 207 (525)
T ss_pred ------cccccccc--ccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCCccCc
Confidence 00000000 000123567999999999999999999999999988887777777888 899999999999999
Q ss_pred hchhhhHhHhcCcEeEEecC--C--CHHHHHHHHHHhCCcEEechhHHHHHHHcCC---CCCCCCCCeEEEEeCCCCcHH
Q 045072 243 GWSYPWGMAAVGGTNVCLRK--F--DAAVIYKMIRQHGVTHMCGAPVVLNMISNLP---RSEPLRNPVHILTAGAPPPAA 315 (556)
Q Consensus 243 g~~~~~~~~~~g~~~~~~~~--~--~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~---~~~~l~~l~~v~~~g~~~~~~ 315 (556)
++..++.++..|+++++.+. + ++..+++.++++++|++...|.++..+.... ....++++|.+++||++++++
T Consensus 208 g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~~~ 287 (525)
T PRK05851 208 GLAFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEPVDCD 287 (525)
T ss_pred cHHHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhheeEeccccCCHH
Confidence 99888889999999988763 3 6788999999999998866555555553322 134577899999999999999
Q ss_pred HHHHhHh----cCC---eEEecccccccccceeeccccccc--cCC--ChhhhccccccCccccceeeeeEEecCCCCce
Q 045072 316 VLFRTES----LGF---LVSHGYGLTETAGLVVSCAWKNKW--NRL--PATERARMKSRQGVRTVCFTEIDVIDSESGLS 384 (556)
Q Consensus 316 ~~~~~~~----~~~---~l~~~yG~tE~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~ 384 (556)
+.+++.+ +++ .+++.||+||++..+......... ... +.........++|.|++++ +++|+|++.+.+
T Consensus 288 ~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~-~v~i~d~~~~~~ 366 (525)
T PRK05851 288 GFERFATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGM-EVRISPGDGAAG 366 (525)
T ss_pred HHHHHHHHHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCc-EEEEECCCCCcc
Confidence 9887763 344 499999999997655432111000 000 0000112345789999999 999999865566
Q ss_pred ecCCCCeeeEEEEecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHh
Q 045072 385 VSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLY 464 (556)
Q Consensus 385 ~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~ 464 (556)
++.+ +.|||+++|++++.||+++++.+ .++||+|||+|+++ +|.++++||.+|+||.+|++|+|.+||++|.
T Consensus 367 ~~~g--~~GEl~v~g~~~~~GY~~~~~~~-----~~~~~~TGDl~~~~-~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~ 438 (525)
T PRK05851 367 VAGR--EIGEIEIRGASMMSGYLGQAPID-----PDDWFPTGDLGYLV-DGGLVVCGRAKELITVAGRNIFPTEIERVAA 438 (525)
T ss_pred CCCC--CeEEEEEecCchhhccccCCccC-----CCCceeccceEEEE-CCEEEEEeecCCEEEECCEEeCHHHHHHHHH
Confidence 7777 68999999999999999998643 37899999999997 8999999999999999999999999999999
Q ss_pred cCCCccccEEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCC--cccceeEEec--CCCCCCCCCccHHH
Q 045072 465 TNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRY--MVPKTVVFKE--ELPKTSTGKIKKFE 540 (556)
Q Consensus 465 ~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~--~~p~~~~~v~--~lP~t~~GKv~r~~ 540 (556)
+||+|.+++|++.+++..++.+.++|+.... . .+.+++.++++++++.+ ++|..+++++ +||+|++||++|++
T Consensus 439 ~~p~V~~~~vv~~~~~~~~~~~~~~v~~~~~-~--~~~~~~~~~~~~~l~~~l~~~P~~~~~v~~~~lP~t~~GKi~r~~ 515 (525)
T PRK05851 439 QVRGVREGAVVAVGTGEGSARPGLVIAAEFR-G--PDEAGARSEVVQRVASECGVVPSDVVFVAPGSLPRTSSGKLRRLA 515 (525)
T ss_pred hCCCcccceEEEEEecCCCCceeEEEEEEec-C--cchHHHHHHHHHHHHHHhCCCccEEEEECCCCcCcCcchHHHHHH
Confidence 9999999999999988777777666654321 1 34456667777777666 8999999998 89999999999999
Q ss_pred HHHHHHH
Q 045072 541 LREMAKA 547 (556)
Q Consensus 541 l~~~~~~ 547 (556)
|++.+++
T Consensus 516 L~~~~~~ 522 (525)
T PRK05851 516 VKRSLEA 522 (525)
T ss_pred HHHHHHh
Confidence 9998865
No 80
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=2.7e-65 Score=541.25 Aligned_cols=520 Identities=23% Similarity=0.275 Sum_probs=396.7
Q ss_pred CCCCHHHHHHHHHHhcCCCCEEEEC----C-----ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHH
Q 045072 12 SPLTPLGFLERAATVYGDCPSIIYN----N-----LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHF 82 (556)
Q Consensus 12 ~~~t~~~~l~~~~~~~p~~~a~~~~----~-----~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~l 82 (556)
...|+.++|.+.++.+|+++|+.+. + ..+||+||.++++++|.+|.+.|+++||+|+|+++|+++|++++|
T Consensus 40 ~~~t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~l 119 (660)
T PLN02430 40 DITTAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAME 119 (660)
T ss_pred CCCCHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 5569999999999999999999753 1 247999999999999999999999999999999999999999999
Q ss_pred HhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchh-hHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccC
Q 045072 83 AIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRN-LVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVD 161 (556)
Q Consensus 83 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (556)
||+++|++++|+++.++.+++.+++++++++++|++..... .+.......+ ....++.+++...... ......
T Consensus 120 A~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~---~l~~ii~~~~~~~~~~---~~~~~~ 193 (660)
T PLN02430 120 ACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAK---RLKAIVSFTSVTEEES---DKASQI 193 (660)
T ss_pred HHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCC---CceEEEEECCCChHHh---hhhhcC
Confidence 99999999999999999999999999999999999765332 2211111111 1334444432111000 000000
Q ss_pred CCcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhh-----cCCCCCCEEEEec
Q 045072 162 SNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLID-----WSIPKQPVYLWTL 236 (556)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 236 (556)
......+++++..+........+..++++++++|||||||.||||++||+++..+....... ..+..+|++++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~l 273 (660)
T PLN02430 194 GVKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSFL 273 (660)
T ss_pred CcEEEEHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEeC
Confidence 01123455554433222111223457899999999999999999999999998766543221 2467899999999
Q ss_pred ChhhhhhchhhhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC---------------------
Q 045072 237 PMFHANGWSYPWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--------------------- 295 (556)
Q Consensus 237 pl~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--------------------- 295 (556)
|++|.++....+.++..|+++++.. .++..+++.+.+++||++.++|.+++.+.+...
T Consensus 274 Pl~H~~~~~~~~~~l~~G~~i~~~~-~~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~ 352 (660)
T PLN02430 274 PLAHILDRMIEEYFFRKGASVGYYH-GDLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKYK 352 (660)
T ss_pred cHHHHHHHHHHHHHHHcCCEEEEeC-CChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 9999999877666778888877664 378899999999999999999999987754100
Q ss_pred ------------CC--------------CCCCCeEEEEeCCCCcHHHHHHhHhcC-CeEEecccccccccceeecccccc
Q 045072 296 ------------SE--------------PLRNPVHILTAGAPPPAAVLFRTESLG-FLVSHGYGLTETAGLVVSCAWKNK 348 (556)
Q Consensus 296 ------------~~--------------~l~~l~~v~~~g~~~~~~~~~~~~~~~-~~l~~~yG~tE~~~~~~~~~~~~~ 348 (556)
.. ...++|.+++||+++++++.+.++.++ +.+++.||+||+++.++....
T Consensus 353 ~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~--- 429 (660)
T PLN02430 353 LAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLRVTSCAFVVQGYGLTETLGPTTLGFP--- 429 (660)
T ss_pred HHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHHHhcCCCeeeecchhhhhhceEeecc---
Confidence 00 015799999999999999887777665 679999999999876654321
Q ss_pred ccCCChhhhccccccCccccceeeeeEEecC-CCC-ceecCCCCeeeEEEEecCCccccccCCCCccccCcCCCCceecC
Q 045072 349 WNRLPATERARMKSRQGVRTVCFTEIDVIDS-ESG-LSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTG 426 (556)
Q Consensus 349 ~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~-~~~-~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TG 426 (556)
......+++|.|.+++ +++|.|. +.+ .+.+.+ ..|||+|+||+++.|||++|+.+...|. +|||+||
T Consensus 430 -------~~~~~~gsvG~p~~~~-evki~d~~~~g~~~~~~~--~~GEi~vrg~~v~~GY~~~~e~t~~~~~-dGw~~TG 498 (660)
T PLN02430 430 -------DEMCMLGTVGAPAVYN-ELRLEEVPEMGYDPLGEP--PRGEICVRGKCLFSGYYKNPELTEEVMK-DGWFHTG 498 (660)
T ss_pred -------ccCCCCCCccCCCCce-EEEEEEcCCcCcccCCCC--CcceEEecCCCccccccCChHHhhhhhh-ccceecc
Confidence 0112347899999999 9999873 233 333333 4699999999999999999999998886 9999999
Q ss_pred ceEEEecCCcEEEEccCCCeEe-eCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEecccccC-------
Q 045072 427 DVGVIHADGYLEIKDRSKDVII-SGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEK------- 498 (556)
Q Consensus 427 D~~~~~~dg~l~~~GR~~d~i~-~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~------- 498 (556)
|+|++|+||++++.||.+|+|+ .+|++|+|.+||+.+.++|.|.+++|++.. .+..++|+|+++++.-.
T Consensus 499 Dig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~~~p~V~~~~V~G~~---~~~~~~A~vv~~~~~~~~~~~~~~ 575 (660)
T PLN02430 499 DIGEILPNGVLKIIDRKKNLIKLSQGEYVALEYLENVYGQNPIVEDIWVYGDS---FKSMLVAVVVPNEENTNKWAKDNG 575 (660)
T ss_pred ceEEECCCCcEEEEEcccccEEcCCCcEEchHHHHHHHhcCCCeeEEEEEecC---CcceEEEEEEcCHHHHHHHHHhCC
Confidence 9999999999999999999999 579999999999999999999999999853 24678899988754210
Q ss_pred -CC----------CHHHHHHHH-----HhcCCCCcccceeEEecC-C-----CCCCCCCccHHHHHHHHHHhccccccC
Q 045072 499 -KP----------TEKEIIEYC-----RARLPRYMVPKTVVFKEE-L-----PKTSTGKIKKFELREMAKAMGKSKVSR 555 (556)
Q Consensus 499 -~~----------~~~~i~~~l-----~~~l~~~~~p~~~~~v~~-l-----P~t~~GKv~r~~l~~~~~~~~~~~~~~ 555 (556)
.. ..+.+.+.+ ++.++.|..+..+.+.++ + .+|+++|++|+.+.+.|.+.++.-|+.
T Consensus 576 ~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~l~~~e~i~~~~l~~~~~~~~~g~lT~t~K~~R~~i~~~y~~~i~~ly~~ 654 (660)
T PLN02430 576 FTGSFEELCSLPELKEHILSELKSTAEKNKLRGFEYIKGVILETKPFDVERDLVTATLKKRRNNLLKYYQVEIDEMYRK 654 (660)
T ss_pred CCCCHHHHhcCHHHHHHHHHHHHHHHHHhCCCCceeeeEEEEECCCCCCcCCcCChhhhhhhHHHHHHHHHHHHHHHHh
Confidence 00 011222222 235899999998888763 2 499999999999999999988776643
No 81
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.2e-64 Score=533.73 Aligned_cols=506 Identities=22% Similarity=0.263 Sum_probs=396.0
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhc
Q 045072 8 TANSSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFT 87 (556)
Q Consensus 8 ~~~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~ 87 (556)
..+.++.|+.+.|.+.++.+|+++|+++.++.+||+||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++
T Consensus 31 ~~~~~~~tl~~~l~~~a~~~p~~~Ai~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~ 110 (600)
T PRK08279 31 ITPDSKRSLGDVFEEAAARHPDRPALLFEDQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKL 110 (600)
T ss_pred cCCCCcccHHHHHHHHHHhCCCCcEEEeCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 34577889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccc
Q 045072 88 GAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCT 167 (556)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (556)
|++++++++..+.+++.++++.++++++|++.+..+.+.+....... ...+...+..... . ......
T Consensus 111 G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~----~-----~~~~~~ 177 (600)
T PRK08279 111 GAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLAR----PPRLWVAGGDTLD----D-----PEGYED 177 (600)
T ss_pred CcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcc----cceEEEecCcccc----c-----cccHHH
Confidence 99999999999999999999999999999998877766655443321 2222332221100 0 000111
Q ss_pred cccccccCCCC-CCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchh
Q 045072 168 YESLVTKGDPN-FKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSY 246 (556)
Q Consensus 168 ~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~ 246 (556)
+.+........ .........+++++++|||||||.||+|.++|.++..++......+++.++|+++..+|++|.+++..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~~g~~~ 257 (600)
T PRK08279 178 LAAAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHNTGGTV 257 (600)
T ss_pred HhhhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCCCcEEEEecCchhhhhHHH
Confidence 11111111110 11112345689999999999999999999999999988888777788999999999999999999876
Q ss_pred hhH-hHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCCC--CCCCCCeEEEEeCCCCcHHHHHHhH-h
Q 045072 247 PWG-MAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPRS--EPLRNPVHILTAGAPPPAAVLFRTE-S 322 (556)
Q Consensus 247 ~~~-~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~--~~l~~l~~v~~~g~~~~~~~~~~~~-~ 322 (556)
.+. ++..|+++++.+.+++..+++.++++++|++.++|++++.+.+.... ....+++. ++|+.+++++.+.+. .
T Consensus 258 ~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~~l~~--~~g~~l~~~~~~~~~~~ 335 (600)
T PRK08279 258 AWSSVLAAGATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDRDHRLRL--MIGNGLRPDIWDEFQQR 335 (600)
T ss_pred HHHHHHhcCcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccccCcceeE--EecCCCCHHHHHHHHHH
Confidence 554 45667777777789999999999999999999999999998876542 22344554 457889999998887 5
Q ss_pred cCC-eEEecccccccccceeeccccccccCCChhhhccccccCccccc----eeeeeEEecCCCC----------ceecC
Q 045072 323 LGF-LVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTV----CFTEIDVIDSESG----------LSVSH 387 (556)
Q Consensus 323 ~~~-~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~----~~~~~~i~d~~~~----------~~~~~ 387 (556)
++. .+++.||+||++..... .. ...+++|.+.. +. .+..++.+++ .+++.
T Consensus 336 ~~~~~l~~~YG~tE~~~~~~~-~~-------------~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~ 400 (600)
T PRK08279 336 FGIPRILEFYAASEGNVGFIN-VF-------------NFDGTVGRVPLWLAHPY-AIVKYDVDTGEPVRDADGRCIKVKP 400 (600)
T ss_pred hCcceeeeeecccccceeecc-cC-------------CCCcccccccccccccc-eeeeeccCcCceeeCCCCccccCCC
Confidence 565 59999999998753221 10 01234454433 22 2222222122 23455
Q ss_pred CCCeeeEEE--EecCCccccccCCCCccccCc------CCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHH
Q 045072 388 DGASLGEIV--FRGGSMMLGYLKDPNGTRKCM------KDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEV 459 (556)
Q Consensus 388 ~~~~~Gel~--i~~~~~~~gy~~~~~~~~~~~------~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~i 459 (556)
+ +.|||+ +.++.++.|| +++..+...| .+++||+|||+|++++||++++.||.+|+||++|++|+|.+|
T Consensus 401 g--~~Gel~~~i~~~~~~~GY-~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~i~p~eI 477 (600)
T PRK08279 401 G--EVGLLIGRITDRGPFDGY-TDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWKGENVATTEV 477 (600)
T ss_pred C--CceeEEEEecCccccccc-CCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeEEECCcccCHHHH
Confidence 5 679998 7799999999 8887766554 236899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCccccEEEeecCCCC-CeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccH
Q 045072 460 ESVLYTNPAVNEAAVVARPDEFW-GETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKK 538 (556)
Q Consensus 460 e~~l~~~~~i~~~~v~~~~~~~~-g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r 538 (556)
|+.+.++|+|.+|+|++++.+.. |...+++++..++.. .+.+++.+++++++++|++|..++++++||+|.+||++|
T Consensus 478 E~~l~~~p~V~~a~v~gv~~~~~~~~~~~~~vv~~~~~~--~~~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKi~r 555 (600)
T PRK08279 478 ENALSGFPGVEEAVVYGVEVPGTDGRAGMAAIVLADGAE--FDLAALAAHLYERLPAYAVPLFVRLVPELETTGTFKYRK 555 (600)
T ss_pred HHHHhcCCCcceEEEEEeecCCCCCccceeEEEecCCcc--CCHHHHHHHHHhhCccccCCeEEEeecCCCCCcchhhhH
Confidence 99999999999999999886543 444566666654332 578899999999999999999999999999999999999
Q ss_pred HHHHHHHHHh
Q 045072 539 FELREMAKAM 548 (556)
Q Consensus 539 ~~l~~~~~~~ 548 (556)
++|++++.+.
T Consensus 556 ~~L~~~~~~~ 565 (600)
T PRK08279 556 VDLRKEGFDP 565 (600)
T ss_pred HHHhhcCCCc
Confidence 9999887665
No 82
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=9.9e-64 Score=522.72 Aligned_cols=515 Identities=24% Similarity=0.356 Sum_probs=409.1
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhc
Q 045072 8 TANSSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFT 87 (556)
Q Consensus 8 ~~~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~ 87 (556)
+.+.++.|+.+.|+++++.+|+++|+.+.++++||.||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~ 94 (541)
T TIGR03205 15 DATIARGTLPDLLSKAAADYGPRPALEFRDRPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALKA 94 (541)
T ss_pred ccCCCCCCHHHHHHHHHHHcCCCceEEECCcEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhc
Confidence 34555779999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEeccCCCCCHHHHHHHHhccCCeEEEEeccc--hhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcc
Q 045072 88 GAILNNINTRLDARTISVLLQHSESKLVLVDYQS--RNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFC 165 (556)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (556)
|++++|++|..+.+++.++++.++++.+|+++.. .....+.... .....++++.....................
T Consensus 95 G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (541)
T TIGR03205 95 GARVVHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEK----GLLDRLIVCEDDNWGKVGTPQAPIPADPRI 170 (541)
T ss_pred CeEEEecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhc----ccceEEEEecccccccccccccccCCCccc
Confidence 9999999999999999999999999999997642 1111111111 002233333322110000000000011112
Q ss_pred cccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhh-----hcCCCCCCEEEEecChhh
Q 045072 166 CTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLI-----DWSIPKQPVYLWTLPMFH 240 (556)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~-----~~~~~~~~~~~~~~pl~~ 240 (556)
..+++++......... ....++++++++|||||||.||+|.++|+++......... .......+++++..|++|
T Consensus 171 ~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~ 249 (541)
T TIGR03205 171 VTYADFVKGAAAPAEW-PAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRATRGDVERVICVLPLFH 249 (541)
T ss_pred ccHHHHHhcCCCCCCC-CCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHhhcccccccCCCCceEEEeccHHH
Confidence 3344443322211111 1245679999999999999999999999998654332111 112234578999999999
Q ss_pred hhhchh-hhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHH
Q 045072 241 ANGWSY-PWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVL 317 (556)
Q Consensus 241 ~~g~~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~ 317 (556)
.+++.. ++.++..|++++....+++..+++.|+++++|++.++|+++..+.+... ...+++++.+++||+++++++.
T Consensus 250 ~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~i~~gg~~~~~~~~ 329 (541)
T TIGR03205 250 IYALTVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLATIGSGGAPLPVEVA 329 (541)
T ss_pred HHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccceEEEccccCCHHHH
Confidence 988765 5667788888887777899999999999999999999999999886543 3456789999999999999999
Q ss_pred HHhH-hcCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEec-CCCCceecCCCCeeeEE
Q 045072 318 FRTE-SLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVID-SESGLSVSHDGASLGEI 395 (556)
Q Consensus 318 ~~~~-~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d-~~~~~~~~~~~~~~Gel 395 (556)
+++. .++..+++.||+||++..+..+... .....+++|.+.++. .++|.+ ++++.+++.+ +.|||
T Consensus 330 ~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~----------~~~~~~~~G~~~~~~-~~~v~~~d~~~~~~~~g--~~Gel 396 (541)
T TIGR03205 330 NFFERKTGLKLKSGWGMTETCSPGTGHPPE----------GPDKPGSIGLMLPGI-ELDVVSLDDPTKVLPPG--EVGEL 396 (541)
T ss_pred HHHHHHhCCCeecccccccCCcccccCCCC----------CCCCCCCcceeccCc-eeEEEecCCCCccCCCC--CeeEE
Confidence 8887 4689999999999998766543211 111235789999888 887764 3467788777 68999
Q ss_pred EEecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEE
Q 045072 396 VFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVV 475 (556)
Q Consensus 396 ~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~ 475 (556)
+++|++++.||+++++.+...|. ++||+|||++++++||++++.||.+|+|+.+|++|+|.+||..+.+++.|.+++|+
T Consensus 397 ~v~~~~~~~gy~~~~~~~~~~~~-~~~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~ 475 (541)
T TIGR03205 397 RIRGPNVTRGYWNRPEESAEAFV-GDRFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIYEHPGVQEVIVI 475 (541)
T ss_pred EEecCCccccccCChhhhHhhhc-cCCcccCceEEEcCCceEEEEccccCeEEECCEEECHHHHHHHHHhCCCeeeEEEE
Confidence 99999999999999998888887 78999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHH
Q 045072 476 ARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELR 542 (556)
Q Consensus 476 ~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~ 542 (556)
+.+++..++.+++++++.++.. ..+.+++.++++++++++++|..++++++||+|++||++|++|+
T Consensus 476 ~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~~~l~~~~~P~~i~~~~~iP~t~~gK~~r~~l~ 541 (541)
T TIGR03205 476 GIPDQYRGEAAKAFVKLRPGAK-PFSLDELRAFLAGKLGKHELPVAVEFVDELPRTPVGKLSRHELR 541 (541)
T ss_pred ecCCcccCceEEEEEEECCCCC-cCCHHHHHHHHHhhcccccCCcEEEEeccCCCCcccceeHhhcC
Confidence 9998877888999888775432 14678899999999999999999999999999999999999874
No 83
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=5.4e-65 Score=538.18 Aligned_cols=506 Identities=16% Similarity=0.139 Sum_probs=395.6
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCCEEEECC-----ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHH
Q 045072 8 TANSSPLTPLGFLERAATVYGDCPSIIYNN-----LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHF 82 (556)
Q Consensus 8 ~~~~~~~t~~~~l~~~~~~~p~~~a~~~~~-----~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~l 82 (556)
+....+.|+.+.|+++++++|+++|+++.+ +++||+||.++++++|.+|.+.|+++||+|+++++|++++++++|
T Consensus 33 ~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~l 112 (614)
T PRK08180 33 PLGDYPRRLTDRLVHWAQEAPDRVFLAERGADGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLAL 112 (614)
T ss_pred CCCCcCccHHHHHHHHHHHCCCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHH
Confidence 334557799999999999999999998752 689999999999999999999999999999999999999999999
Q ss_pred HhhhccceEeccCCCCC-----HHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCc
Q 045072 83 AIPFTGAILNNINTRLD-----ARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSS 157 (556)
Q Consensus 83 A~~~~G~~~v~l~~~~~-----~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (556)
||+++|++++|++|.++ .+++.+++++++++++|+++... +.......... ...++.......
T Consensus 113 A~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~--~~~~~~~~~~~--~~~~i~~~~~~~-------- 180 (614)
T PRK08180 113 AAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAA--FARALAAVVPA--DVEVVAVRGAVP-------- 180 (614)
T ss_pred HHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHH--HHHHHhhhccC--CceEEEecCCCC--------
Confidence 99999999999999998 79999999999999999975421 11111111100 112232221110
Q ss_pred cccCCCcccccccccccCCCC--CCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCC--CCCEEE
Q 045072 158 QTVDSNFCCTYESLVTKGDPN--FKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIP--KQPVYL 233 (556)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~--~~~~~~ 233 (556)
......+.+++...... ........++++++|+|||||||.||||++||+++..+.......+... ..++++
T Consensus 181 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l 256 (614)
T PRK08180 181 ----GRAATPFAALLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLV 256 (614)
T ss_pred ----CcccccHHHHhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEE
Confidence 00112344443321111 0111124568999999999999999999999999988776665555543 568999
Q ss_pred EecChhhhhhchh-hhHhHhcCcEeEEec-CCC---HHHHHHHHHHhCCcEEechhHHHHHHHcCCC------CCCCCCC
Q 045072 234 WTLPMFHANGWSY-PWGMAAVGGTNVCLR-KFD---AAVIYKMIRQHGVTHMCGAPVVLNMISNLPR------SEPLRNP 302 (556)
Q Consensus 234 ~~~pl~~~~g~~~-~~~~~~~g~~~~~~~-~~~---~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~------~~~l~~l 302 (556)
+.+|++|.+|+.. ++.++..|+++++.+ .++ ..++++.++++++|+++++|.++..|.+... ...++++
T Consensus 257 ~~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l 336 (614)
T PRK08180 257 DWLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSRL 336 (614)
T ss_pred EecchHHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccce
Confidence 9999999998754 567788899988865 233 3578889999999999999999988876422 2346899
Q ss_pred eEEEEeCCCCcHHHHHHhHh-----c--CCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeE
Q 045072 303 VHILTAGAPPPAAVLFRTES-----L--GFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEID 375 (556)
Q Consensus 303 ~~v~~~g~~~~~~~~~~~~~-----~--~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 375 (556)
|.+++||+++++++.+++.+ + ++.+++.||+||+++++...... ....+++|.|.+++ +++
T Consensus 337 r~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~-----------~~~~~svG~p~pg~-~v~ 404 (614)
T PRK08180 337 KLLFYAGAALSQDVWDRLDRVAEATCGERIRMMTGLGMTETAPSATFTTGP-----------LSRAGNIGLPAPGC-EVK 404 (614)
T ss_pred eEEEEccCCCCHHHHHHHHHHHHhhcCCCceeeeeecccccCCceEecccc-----------cCCCCcccCccCCc-EEE
Confidence 99999999999999988874 2 37899999999998766543211 12346899999999 999
Q ss_pred EecCCCCceecCCCCeeeEEEEecCCccccccCCCCccccCcCCCCceecCceEEE----ecCCcEEEEccCCCeEe-eC
Q 045072 376 VIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVI----HADGYLEIKDRSKDVII-SG 450 (556)
Q Consensus 376 i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~----~~dg~l~~~GR~~d~i~-~~ 450 (556)
|+|++ ..|||+++|++++.|||++|+.+...|..+|||+|||+|++ |+||++++.||.+|+|+ .+
T Consensus 405 i~d~~----------~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~ 474 (614)
T PRK08180 405 LVPVG----------GKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSS 474 (614)
T ss_pred EecCC----------CCcEEEEecCccchhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceEEecchhhhEEcCC
Confidence 99852 35999999999999999999999888877999999999999 46899999999999888 68
Q ss_pred cEeeC--hHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEeccccc-------------CCCCHHHHHHHHHhcCCC
Q 045072 451 GENLS--SVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELE-------------KKPTEKEIIEYCRARLPR 515 (556)
Q Consensus 451 G~~v~--~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~-------------~~~~~~~i~~~l~~~l~~ 515 (556)
|++|+ +.|+|..+.+||.|.+++|++.+++. +.++|+++++.. +..+.+++.+++++++..
T Consensus 475 G~~i~~~p~Eie~~l~~~p~V~~a~V~g~~~~~----~~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 550 (614)
T PRK08180 475 GTWVSVGPLRARAVSAGAPLVQDVVITGHDRDE----IGLLVFPNLDACRRLAGLLADASLAEVLAHPAVRAAFRERLAR 550 (614)
T ss_pred CcEecchhhhHHHHhhcCchhheEEEEcCCCCc----eEEEEEcCHHHHHHHHhhcccCCHHHHhcCHHHHHHHHHHHHH
Confidence 99877 77888999999999999999998764 668888776521 012445677777776665
Q ss_pred Cc--------ccceeEEecCCCCCC------CCCccHHHHHHHHHHhccccccC
Q 045072 516 YM--------VPKTVVFKEELPKTS------TGKIKKFELREMAKAMGKSKVSR 555 (556)
Q Consensus 516 ~~--------~p~~~~~v~~lP~t~------~GKv~r~~l~~~~~~~~~~~~~~ 555 (556)
++ +|..+.+++++|+++ +||++|+++.+.|++.++.-|..
T Consensus 551 ~~~~~~~~~~~p~~~~~~~~~p~~~~gk~t~~~~~~R~~~~~~y~~~i~~lY~~ 604 (614)
T PRK08180 551 LNAQATGSSTRVARALLLDEPPSLDAGEITDKGYINQRAVLARRAALVEALYAD 604 (614)
T ss_pred HHhhccccHhheeEEEEecCCCCCccCccCccccccHHHHHHHhHHHHHHHhCC
Confidence 55 899999999998664 66899999999999998877753
No 84
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=3.4e-64 Score=522.53 Aligned_cols=488 Identities=22% Similarity=0.273 Sum_probs=404.9
Q ss_pred CHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEecc
Q 045072 15 TPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNI 94 (556)
Q Consensus 15 t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 94 (556)
++.+.|.+.++.+|+++|+.+.++++||.||.+++.++|..|.+.|+++|++|+++++|+.++++++|||+++|++++++
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~~ 80 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQGQELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYIPV 80 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcCCcEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEeCC
Confidence 47789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCccccccccccc
Q 045072 95 NTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESLVTK 174 (556)
Q Consensus 95 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (556)
++.++.+++.++++.++++.++++.+...... ...++..... ......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~-----------~~~~~~~~~~---------------------~~~~~~ 128 (502)
T TIGR01734 81 DTSIPSERIEMIIEAAGPELVIHTAELSIDAV-----------GTQIITLSAL---------------------EQAETS 128 (502)
T ss_pred CCcChHHHHHHHHHhcCCCEEEeccccccccc-----------CCceEEchHh---------------------hhhhhh
Confidence 99999999999999999999999876432211 0111111110 000000
Q ss_pred CCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchhhhHhHhcC
Q 045072 175 GDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVG 254 (556)
Q Consensus 175 ~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g 254 (556)
... .....+..+++.++++|||||||.||+|.++|.++..........+++..+++++...|++|..++..++.++..|
T Consensus 129 ~~~-~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G 207 (502)
T TIGR01734 129 GGP-VSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSVMDLYPCLASG 207 (502)
T ss_pred cCC-ccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCCCCCceEEeecCceechhHHHHHHHHHCC
Confidence 000 1111124567999999999999999999999999988887777778888999999999999999988888999999
Q ss_pred cEeEEecC---CCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHHHHhH-hc-CCeE
Q 045072 255 GTNVCLRK---FDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVLFRTE-SL-GFLV 327 (556)
Q Consensus 255 ~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~~~~~-~~-~~~l 327 (556)
+++++.++ .++..+++.+++++++.+.++|.++..++.... ...+++++.++++|++++.+..+++. .+ ++.+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~ 287 (502)
T TIGR01734 208 GTLHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQENYPHLTHFLFCGEELPVKTAKALLERFPKATI 287 (502)
T ss_pred CEEEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhccccccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEE
Confidence 99998874 588999999999999999999999887765432 45678999999999999999999887 44 7899
Q ss_pred EecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCcccccc
Q 045072 328 SHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYL 407 (556)
Q Consensus 328 ~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~ 407 (556)
++.||+||+++.+.......+ ........++|.+.+++ +++|+|+ ++.+++.+ +.|||+++|+.++.||+
T Consensus 288 ~~~yG~tE~~~~~~~~~~~~~------~~~~~~~~~vg~~~~~~-~~~i~~~-~~~~~~~g--~~Gel~v~g~~~~~gy~ 357 (502)
T TIGR01734 288 YNTYGPTEATVAVTSVKITQE------ILDQYPRLPIGFAKPDM-NLFIMDE-EGEPLPEG--EKGEIVIVGPSVSKGYL 357 (502)
T ss_pred EeCccCCcceEEEEEEEcccc------ccccCCccccccccCCC-EEEEECC-CCCCCCCC--CeeEEEEcccccccccc
Confidence 999999999754433221111 11112235789999999 9999998 58888887 68999999999999999
Q ss_pred CCCCccccCcC---CCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeec-CCCCC
Q 045072 408 KDPNGTRKCMK---DDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARP-DEFWG 483 (556)
Q Consensus 408 ~~~~~~~~~~~---~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~-~~~~g 483 (556)
++++.+...|. +.+||+|||+|+++++ ++++.||.+|+|+.+|++|+|.+||+.+.++|.|.++++++.. ....+
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~TGDlg~~~~~-~l~i~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~ 436 (502)
T TIGR01734 358 NNPEKTAEAFFSHEGQPAYRTGDAGTITDG-QLFYQGRLDFQIKLHGYRIELEDIEFNLRQSSYIESAVVVPKYNKDHKV 436 (502)
T ss_pred CCcccchHhheeCCCcEEEECCCEEEEECC-EEEEeccccCeEEECcEEeCHHHHHHHHHcCCCccEEEEEEEEcCCCCc
Confidence 99998876652 3469999999999976 9999999999999999999999999999999999999999975 44456
Q ss_pred eeeEEEEEecccccC--CCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHH
Q 045072 484 ETPCAFLSLKAELEK--KPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAK 546 (556)
Q Consensus 484 ~~~~~~v~~~~~~~~--~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~ 546 (556)
+.++++|+..+.... ....+++.+.+++++++++.|..++++++||+|++||++|++|++++.
T Consensus 437 ~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~~~~v~~lP~t~~gKv~r~~l~~~~~ 501 (502)
T TIGR01734 437 EYLIAAIVPETEDFEKEFQLTKAIKKELKKSLPAYMIPRKFIYRDQLPLTANGKIDRKALAEEVN 501 (502)
T ss_pred eEEEEEEEecccccccchhhHHHHHHHHhhhChhhcCCcEEEEccccCCCCCCcccHHHHHHhhc
Confidence 778888887654321 122378899999999999999999999999999999999999999864
No 85
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=2.2e-64 Score=573.75 Aligned_cols=516 Identities=21% Similarity=0.237 Sum_probs=418.7
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEEC-CccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccc
Q 045072 11 SSPLTPLGFLERAATVYGDCPSIIYN-NLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGA 89 (556)
Q Consensus 11 ~~~~t~~~~l~~~~~~~p~~~a~~~~-~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (556)
....++.+.+.++++++|+++|+++. ++++||+||.++++++|++|.+ ++++||+|+++++|+++++++++||+++|+
T Consensus 612 ~~~~~l~~~~~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~la~~~~G~ 690 (1146)
T PRK08633 612 EALPPLAEAWIDTAKRNWSRLAVADSTGGELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALANLALLLAGK 690 (1146)
T ss_pred CCCCCHHHHHHHHHHhcCCCcEEEcCCCCcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHHHHHHHcCC
Confidence 44568999999999999999999874 5799999999999999999987 589999999999999999999999999999
Q ss_pred eEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccc
Q 045072 90 ILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYE 169 (556)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (556)
+++|++|..+.+++.++++++++++++++++..+.+........ ......++..++.... . .....+.
T Consensus 691 v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------~-----~~~~~~~ 758 (1146)
T PRK08633 691 VPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLE-LPENVKVIYLEDLKAK------I-----SKVDKLT 758 (1146)
T ss_pred EEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchh-cccCceEEEeehhccc------c-----chhHHHH
Confidence 99999999999999999999999999998776554432100000 0001233333221100 0 0001111
Q ss_pred cccccCC-CC----CCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhc
Q 045072 170 SLVTKGD-PN----FKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGW 244 (556)
Q Consensus 170 ~~~~~~~-~~----~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~ 244 (556)
+...... +. .....+..++++++++|||||||.||+|.++|+++..+.......+++.++|++++.+|++|..|+
T Consensus 759 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~ 838 (1146)
T PRK08633 759 ALLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRNDDVILSSLPFFHSFGL 838 (1146)
T ss_pred HHHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCCCCEEEEcCcHHHHHhH
Confidence 1111000 00 000123457899999999999999999999999998888777777888999999999999999998
Q ss_pred hh-hhHhHhcCcEeEEec-CCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHHHHh
Q 045072 245 SY-PWGMAAVGGTNVCLR-KFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVLFRT 320 (556)
Q Consensus 245 ~~-~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~~~~ 320 (556)
.. .+.++..|+++++.+ ++++..+++.++++++|++.++|++++.+.+... ...++++|.+++||+++++++.+++
T Consensus 839 ~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~ 918 (1146)
T PRK08633 839 TVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGAEKLKPEVADAF 918 (1146)
T ss_pred HHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcCCcCCHHHHHHH
Confidence 76 677888899888876 4789999999999999999999999999987543 4567899999999999999999998
Q ss_pred H-hcCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEec
Q 045072 321 E-SLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRG 399 (556)
Q Consensus 321 ~-~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~ 399 (556)
+ .+++++++.||+||++++++....+....... .......+++|.|.++. +++|+|++++.+++.| +.|||+++|
T Consensus 919 ~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~-~~~~~~~~~vG~p~~~~-~v~i~d~~~~~~~~~g--~~Gel~v~g 994 (1146)
T PRK08633 919 EEKFGIRILEGYGATETSPVASVNLPDVLAADFK-RQTGSKEGSVGMPLPGV-AVRIVDPETFEELPPG--EDGLILIGG 994 (1146)
T ss_pred HHHhCCCeecccccccCcceEEEecCcccccccc-cccCCCCCCccccCCCC-EEEEEcCCCCccCCCC--CceEEEEcC
Confidence 7 56999999999999987765432211100000 11122356899999999 9999998889999988 689999999
Q ss_pred CCccccccCCCCccccCcCC---CCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCC--CccccEE
Q 045072 400 GSMMLGYLKDPNGTRKCMKD---DGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNP--AVNEAAV 474 (556)
Q Consensus 400 ~~~~~gy~~~~~~~~~~~~~---~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~--~i~~~~v 474 (556)
+.++.||+++++.+...+.+ ++||+|||+|++|+||++++.||.+|+||.+|++|+|.+||+.+.++| .+.+++|
T Consensus 995 ~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~~~~~~~~v 1074 (1146)
T PRK08633 995 PQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLGAVEEELAKALGGEEVVFAV 1074 (1146)
T ss_pred CCccccccCCccchHHHhhcCCCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECHHHHHHHHHhccCCCCceEEE
Confidence 99999999999988877762 399999999999999999999999999999999999999999999998 4667999
Q ss_pred EeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHh-cCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHh
Q 045072 475 VARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRA-RLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAM 548 (556)
Q Consensus 475 ~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~-~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 548 (556)
++.+++..|+.++++++.. . .+.+++.+++.+ ++++|++|..+++++++|+|++||++|++|+++..+.
T Consensus 1075 ~~~~~~~~g~~~~~~v~~~-~----~~~~~l~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~L~~~~~~~ 1144 (1146)
T PRK08633 1075 TAVPDEKKGEKLVVLHTCG-A----EDVEELKRAIKESGLPNLWKPSRYFKVEALPLLGSGKLDLKGLKELALAL 1144 (1146)
T ss_pred EeccCCCCCcEEEEEEecC-c----cCHHHHHHHHHhcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHHh
Confidence 9999998899888888752 1 467788888875 6999999999999999999999999999999987664
No 86
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=1.8e-64 Score=579.88 Aligned_cols=491 Identities=19% Similarity=0.205 Sum_probs=411.1
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccc
Q 045072 10 NSSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGA 89 (556)
Q Consensus 10 ~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (556)
+.+..++.++|.++++.+|+++|+++.++.+||+||.++++++|..|.+.|+++||+|+++++++++++++++||+++|+
T Consensus 454 ~~~~~~l~~~~~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la~~~~G~ 533 (1296)
T PRK10252 454 EIPETTLSALVAQQAAKTPDAPALADARYQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAGA 533 (1296)
T ss_pred CCCcCCHHHHHHHHHHhCCCCeEEEcCCCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCC
Confidence 44567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccc
Q 045072 90 ILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYE 169 (556)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (556)
+++|++|+++.+++.++++.+++++++++.+....+... . ........
T Consensus 534 ~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~----~----~~~~~~~~------------------------ 581 (1296)
T PRK10252 534 AWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADV----P----DLTSLCYN------------------------ 581 (1296)
T ss_pred EEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccC----C----Cceeeecc------------------------
Confidence 999999999999999999999999999987654332110 0 00000000
Q ss_pred cccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchhhhH
Q 045072 170 SLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSYPWG 249 (556)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~ 249 (556)
........ .......++++++++|||||||.||||+++|+++.+...+....+++.++|+++...|++|..++..++.
T Consensus 582 ~~~~~~~~--~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~ 659 (1296)
T PRK10252 582 APLAPQGA--APLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTADDVVLQKTPCSFDVSVWEFFW 659 (1296)
T ss_pred cccccccC--CCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEeCCcchhhhHHHHHH
Confidence 00000000 0111235679999999999999999999999999998888888889999999999999999998888899
Q ss_pred hHhcCcEeEEecC---CCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC----CCCCCCCeEEEEeCCCCcHHHHHHhHh
Q 045072 250 MAAVGGTNVCLRK---FDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR----SEPLRNPVHILTAGAPPPAAVLFRTES 322 (556)
Q Consensus 250 ~~~~g~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----~~~l~~l~~v~~~g~~~~~~~~~~~~~ 322 (556)
++..|+++++.++ .++..+++.++++++|++.++|+++..+.+... ...+.++|.+++||+++++++.+.+.+
T Consensus 660 ~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~ 739 (1296)
T PRK10252 660 PFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEALPADLCREWQQ 739 (1296)
T ss_pred HHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCCCCHHHHHHHHh
Confidence 9999999998763 689999999999999999999999998876543 234578999999999999999998884
Q ss_pred -cCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCC
Q 045072 323 -LGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGS 401 (556)
Q Consensus 323 -~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~ 401 (556)
+++++++.||+||++..++......... ........++|.|+++. .+.|+|+ ++.+++.| ..|||+|+|++
T Consensus 740 ~~~~~l~n~YG~TE~~~~~~~~~~~~~~~----~~~~~~~~~iG~p~~~~-~~~i~d~-~~~~~~~g--~~Gel~i~g~~ 811 (1296)
T PRK10252 740 LTGAPLHNLYGPTEAAVDVSWYPAFGEEL----AAVRGSSVPIGYPVWNT-GLRILDA-RMRPVPPG--VAGDLYLTGIQ 811 (1296)
T ss_pred cCCCEEEeCCCcchhhheeeeeecccccc----cccCCCCCCcccccCCC-EEEEECC-CCCCCCCC--CceEEEecccc
Confidence 5899999999999987655433211100 00011235789999999 9999997 78899988 68999999999
Q ss_pred ccccccCCCCccccCcCC------CCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEE
Q 045072 402 MMLGYLKDPNGTRKCMKD------DGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVV 475 (556)
Q Consensus 402 ~~~gy~~~~~~~~~~~~~------~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~ 475 (556)
+++||+++++.+..+|.. ++||+|||+|++++||.+++.||.||+||++|.+|++.+||..|.++|+|.+++|+
T Consensus 812 ~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ri~~~eIE~~l~~~~~v~~a~v~ 891 (1296)
T PRK10252 812 LAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDDQLKIRGQRIELGEIDRAMQALPDVEQAVTH 891 (1296)
T ss_pred cchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccCCeEEEeeEEecHHHHHHHHHhCccccceEEE
Confidence 999999999999888853 34999999999999999999999999999999999999999999999999999877
Q ss_pred eec----CCCCC--eeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHH
Q 045072 476 ARP----DEFWG--ETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREM 544 (556)
Q Consensus 476 ~~~----~~~~g--~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~ 544 (556)
... ++..| ..++++|+...+.. .+.+++.++++++++.|++|..++.+++||+|++||++|++|++.
T Consensus 892 ~~~~~~~~~~~~~~~~lva~v~~~~~~~--~~~~~l~~~l~~~Lp~~~~P~~~~~~~~lP~t~~GKidr~~L~~~ 964 (1296)
T PRK10252 892 ACVINQAAATGGDARQLVGYLVSQSGLP--LDTSALQAQLRERLPPHMVPVVLLQLDQLPLSANGKLDRKALPLP 964 (1296)
T ss_pred EEeccccccCCCCccEEEEEEEcCCCCC--CCHHHHHHHHHhhCchhcCCcEEEEecCCCCCCCcChhHHhcCCC
Confidence 552 11122 36888888766543 578899999999999999999999999999999999999999753
No 87
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.2e-64 Score=515.14 Aligned_cols=454 Identities=26% Similarity=0.370 Sum_probs=387.1
Q ss_pred hcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHH
Q 045072 26 VYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISV 105 (556)
Q Consensus 26 ~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 105 (556)
..++++|+.+.++++||.||.++++++|..|+ ++|+|+++++|++++++++|||+++|++++|++|..+.+++.+
T Consensus 12 ~~~~~~a~~~~~~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~ 86 (471)
T PRK07787 12 AADIADAVRIGGRVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGVAERRH 86 (471)
T ss_pred ccCCceEEEeCCcEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCChHHHHH
Confidence 35789999999999999999999999999997 4799999999999999999999999999999999999999999
Q ss_pred HHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccccccccCCCCCCCCCCC
Q 045072 106 LLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESLVTKGDPNFKWIRPQ 185 (556)
Q Consensus 106 ~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (556)
+++++++++++++.+... .. .+........ ..+.. ....
T Consensus 87 ~l~~~~~~~il~~~~~~~------~~------~~~~~~~~~~------------------~~~~~-----------~~~~ 125 (471)
T PRK07787 87 ILADSGAQAWLGPAPDDP------AG------LPHVPVRLHA------------------RSWHR-----------YPEP 125 (471)
T ss_pred HHHhcCCCEEEecCCccc------cc------ccceeeeccc------------------ccccc-----------CCCC
Confidence 999999999999763110 00 1111000000 00000 0113
Q ss_pred CCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchh-hhHhHhcCcEeEEecCCC
Q 045072 186 NEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSY-PWGMAAVGGTNVCLRKFD 264 (556)
Q Consensus 186 ~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~~~~ 264 (556)
.++++++++|||||||.||+|.++|+++...+......+++..+++++..+|++|..|+.. ++.++..|+++++...++
T Consensus 126 ~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~ 205 (471)
T PRK07787 126 DPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGRPT 205 (471)
T ss_pred CCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCCCC
Confidence 4679999999999999999999999999888777777778889999999999999998765 677888999999888899
Q ss_pred HHHHHHHHHHhCCcEEechhHHHHHHHcCCC-CCCCCCCeEEEEeCCCCcHHHHHHhH-hcCCeEEecccccccccceee
Q 045072 265 AAVIYKMIRQHGVTHMCGAPVVLNMISNLPR-SEPLRNPVHILTAGAPPPAAVLFRTE-SLGFLVSHGYGLTETAGLVVS 342 (556)
Q Consensus 265 ~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~-~~~l~~l~~v~~~g~~~~~~~~~~~~-~~~~~l~~~yG~tE~~~~~~~ 342 (556)
+..+++.++ +++|.+.++|+++..+.+... ...+.++|.+++||+++++++.+++. .++..+++.||+||++..+..
T Consensus 206 ~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~~~~~l~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~ 284 (471)
T PRK07787 206 PEAYAQALS-EGGTLYFGVPTVWSRIAADPEAARALRGARLLVSGSAALPVPVFDRLAALTGHRPVERYGMTETLITLST 284 (471)
T ss_pred HHHHHHHHh-hCceEEEcchHHHHHHHhCccccccccceeEEEECCCCCCHHHHHHHHHHcCCCeecccCccccCcceec
Confidence 999999999 999999999999999986543 34577899999999999999999888 468899999999999764433
Q ss_pred ccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccCCCCccccCcCCCCc
Q 045072 343 CAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGW 422 (556)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~ 422 (556)
... ......++|.|.++. .++|+|+ ++.+++.++.+.|||+++|++++.||+++++.+...|.+++|
T Consensus 285 ~~~-----------~~~~~~~vG~~~~g~-~~~i~d~-~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~ 351 (471)
T PRK07787 285 RAD-----------GERRPGWVGLPLAGV-ETRLVDE-DGGPVPHDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGW 351 (471)
T ss_pred CCC-----------CcccCCcccccCCCc-EEEEECC-CCCCCCCCCCCceEEEEECcccchhhcCChhhchhcccCCCc
Confidence 210 111235789999998 9999998 577776433247999999999999999999999998988999
Q ss_pred eecCceEEEecCCcEEEEccC-CCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEecccccCCCC
Q 045072 423 FYTGDVGVIHADGYLEIKDRS-KDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPT 501 (556)
Q Consensus 423 ~~TGD~~~~~~dg~l~~~GR~-~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~ 501 (556)
|+|||+|++++||++++.||. +|+++.+|++|++.+||+.|.+++.|.+++|++.+++..++.++++++..+. .+
T Consensus 352 ~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~----~~ 427 (471)
T PRK07787 352 FRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRIGAGEIETALLGHPGVREAAVVGVPDDDLGQRIVAYVVGADD----VA 427 (471)
T ss_pred eecCceEEEcCCCCEEEeCCCCceeEeeCCEEECHHHHHHHHHhCCCcceEEEEcccccccCeEEEEEEEeCCC----CC
Confidence 999999999999999999996 8999999999999999999999999999999999988888899999887333 57
Q ss_pred HHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHH
Q 045072 502 EKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELRE 543 (556)
Q Consensus 502 ~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~ 543 (556)
.+++.+++++++++++.|..++++++||+|++||++|++|++
T Consensus 428 ~~~l~~~l~~~l~~~~~P~~i~~~~~iP~~~~GKi~r~~L~~ 469 (471)
T PRK07787 428 ADELIDFVAQQLSVHKRPREVRFVDALPRNAMGKVLKKQLLS 469 (471)
T ss_pred HHHHHHHHHhhcccccCCcEEEEeccCCCCCCccccHHHhcc
Confidence 889999999999999999999999999999999999999975
No 88
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.6e-64 Score=540.13 Aligned_cols=513 Identities=21% Similarity=0.258 Sum_probs=389.0
Q ss_pred CCCCHHHHHHHHHHhcCCCCEEEEC---------------------------CccccHHHHHHHHHHHHHHHHHcCCCCC
Q 045072 12 SPLTPLGFLERAATVYGDCPSIIYN---------------------------NLIYTWSQTHRRCLQLASSLSSIGITRG 64 (556)
Q Consensus 12 ~~~t~~~~l~~~~~~~p~~~a~~~~---------------------------~~~~Ty~~l~~~~~~la~~L~~~g~~~g 64 (556)
...|+.+.|.++++.+|+++|+.+. .+++||+||.++++++|.+|.+.|+++|
T Consensus 67 ~~~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~g 146 (700)
T PTZ00216 67 YGPNFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKG 146 (700)
T ss_pred CCCCHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCC
Confidence 3568999999999999999999873 3689999999999999999999999999
Q ss_pred CEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEE
Q 045072 65 HVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLI 144 (556)
Q Consensus 65 d~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (556)
|+|+|+++|+++|++++|||+++|++++|+++.++.+++.+++++++++++|++.+....+.......... ...++.+
T Consensus 147 d~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~--~~~ii~~ 224 (700)
T PTZ00216 147 SNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGGMP--NTTIIYL 224 (700)
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhccCC--ceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999876655444333221110 1234433
Q ss_pred cCCCCCCCCCCCccccCCCcccccccccccCC---CCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhh
Q 045072 145 ADHTDHDNDNKSSQTVDSNFCCTYESLVTKGD---PNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSL 221 (556)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~ 221 (556)
++.... .........++++++..+. .......+..++++++++|||||||.||||++||+++.+++....
T Consensus 225 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~ 297 (700)
T PTZ00216 225 DSLPAS-------VDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALE 297 (700)
T ss_pred CCCccc-------cccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHH
Confidence 321100 0001112244555554431 111112234678999999999999999999999999988766554
Q ss_pred hhc----C-CCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecCCCHHHHHH-------HHHHhCCcEEechhHHHHH
Q 045072 222 IDW----S-IPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRKFDAAVIYK-------MIRQHGVTHMCGAPVVLNM 289 (556)
Q Consensus 222 ~~~----~-~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~i~~~~~t~~~~~p~~~~~ 289 (556)
..+ . +.+++++++.+|++|.+++......+..|+++++. ++..+.+ .+++++||++.++|.+++.
T Consensus 298 ~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~---~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~ 374 (700)
T PTZ00216 298 DRLNDLIGPPEEDETYCSYLPLAHIMEFGVTNIFLARGALIGFG---SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDT 374 (700)
T ss_pred hhcccccCCCCCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEEC---CHHHhhhhhccccchHHHcCCcEEEechHHHHH
Confidence 332 2 36789999999999999876655556667665552 4555554 6889999999999999988
Q ss_pred HHcCCC---------------------------C---------------C-CCCCCeEEEEeCCCCcHHHHHHhHh-cCC
Q 045072 290 ISNLPR---------------------------S---------------E-PLRNPVHILTAGAPPPAAVLFRTES-LGF 325 (556)
Q Consensus 290 l~~~~~---------------------------~---------------~-~l~~l~~v~~~g~~~~~~~~~~~~~-~~~ 325 (556)
+.+... . . ..+++|.+++||+++++++.++++. ++
T Consensus 375 l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~~- 453 (700)
T PTZ00216 375 IKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVFG- 453 (700)
T ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHhh-
Confidence 753210 0 0 0157999999999999999887774 46
Q ss_pred eEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCc-eecCCCCeeeEEEEecCCccc
Q 045072 326 LVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGL-SVSHDGASLGEIVFRGGSMML 404 (556)
Q Consensus 326 ~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~-~~~~~~~~~Gel~i~~~~~~~ 404 (556)
.+++.||+||+++.++.... .....+++|.|++++ +++|+|++... ...++ ..|||+|+|++++.
T Consensus 454 ~l~~~YG~TEt~~~~~~~~~-----------~~~~~~svG~p~~g~-evkI~d~~~~~~~~~~~--~~GEL~vrG~~v~~ 519 (700)
T PTZ00216 454 MVIQGWGLTETVCCGGIQRT-----------GDLEPNAVGQLLKGV-EMKLLDTEEYKHTDTPE--PRGEILLRGPFLFK 519 (700)
T ss_pred hHhhccCcccccccccccCC-----------CCCCCCCcCCcCCCe-EEEEeechhhccCCCCC--CCceEEEcCCcccc
Confidence 99999999999765543211 112347899999999 99999974321 22233 46999999999999
Q ss_pred cccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEe-eCcEeeChHHHHHHHhcCCCcccc--EEEeecCCC
Q 045072 405 GYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVII-SGGENLSSVEVESVLYTNPAVNEA--AVVARPDEF 481 (556)
Q Consensus 405 gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~-~~G~~v~~~~ie~~l~~~~~i~~~--~v~~~~~~~ 481 (556)
|||++|+.+...|..+|||+|||+|++|+||++++.||.+|+|| .+|++|+|.+||+.+.++|.|.++ +|++.++
T Consensus 520 GY~~~pe~T~~~f~~dGw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V~~~~~~v~~~~~-- 597 (700)
T PTZ00216 520 GYYKQEELTREVLDEDGWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVVPNGVCVLVHPA-- 597 (700)
T ss_pred hhcCChhHhhhhccccCCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCcccceEEEEEecC--
Confidence 99999999999998899999999999999999999999999999 999999999999999999999973 3444332
Q ss_pred CCeeeEEEEEeccccc-------C-CC----------CHHHHHHHHH-----hcCCCCcccceeEEecC------CCCCC
Q 045072 482 WGETPCAFLSLKAELE-------K-KP----------TEKEIIEYCR-----ARLPRYMVPKTVVFKEE------LPKTS 532 (556)
Q Consensus 482 ~g~~~~~~v~~~~~~~-------~-~~----------~~~~i~~~l~-----~~l~~~~~p~~~~~v~~------lP~t~ 532 (556)
...++++|+++.+.- . .. ..+.+.+.+. +.+..|..+..+.++.+ =-+|+
T Consensus 598 -~~~l~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~~~~~~f~~~~g~lT~ 676 (700)
T PTZ00216 598 -RSYICALVLTDEAKAMAFAKEHGIEGEYPAILKDPEFQKKATESLQETARAAGRKSFEIVRHVRVLSDEWTPENGVLTA 676 (700)
T ss_pred -CceEEEEEecCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHhcCCCCceeEeEEEEECCCCCCCCCCCCh
Confidence 246888888764310 0 00 0122233322 35778888888888753 33799
Q ss_pred CCCccHHHHHHHHHHhcccccc
Q 045072 533 TGKIKKFELREMAKAMGKSKVS 554 (556)
Q Consensus 533 ~GKv~r~~l~~~~~~~~~~~~~ 554 (556)
++|++|+++++.|.+.++.-|.
T Consensus 677 t~K~~R~~i~~~y~~~i~~ly~ 698 (700)
T PTZ00216 677 AMKLKRRVIDERYADLIKELFA 698 (700)
T ss_pred hhccchHHHHHHHHHHHHHHhc
Confidence 9999999999999999887664
No 89
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=1.9e-64 Score=626.30 Aligned_cols=486 Identities=21% Similarity=0.211 Sum_probs=417.1
Q ss_pred CCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEe
Q 045072 13 PLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILN 92 (556)
Q Consensus 13 ~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (556)
+.++.++|+++++++|+++|+++.++++||+||.++++++|+.|.+.|+++|++|+++++|++++++++|||+++|++++
T Consensus 510 ~~~~~~~~~~~a~~~p~~~A~~~~~~~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~l~~~~s~~~i~~~la~~~aG~~~v 589 (5163)
T PRK12316 510 QRGVHRLFEEQVERTPEAPALAFGEETLDYAELNRRANRLAHALIERGVGPDVLVGVAMERSIEMVVALLAILKAGGAYV 589 (5163)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEEe
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCccccccccc
Q 045072 93 NINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESLV 172 (556)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (556)
|++|.++.+++.++++++++++++++......+. ... ...++....... .+
T Consensus 590 pld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~-------~~~-~~~~~~~~~~~~---------------------~~ 640 (5163)
T PRK12316 590 PLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLP-------LAA-GVQVLDLDRPAA---------------------WL 640 (5163)
T ss_pred ccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCC-------ccc-CceEEEecCcch---------------------hh
Confidence 9999999999999999999999999875433211 000 112222221100 00
Q ss_pred ccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchhhhHhHh
Q 045072 173 TKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSYPWGMAA 252 (556)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~ 252 (556)
.... .........++++++++|||||||.||||+++|+++...+.+....+++.++++++...|++|..++..++.++.
T Consensus 641 ~~~~-~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~p~~fd~~~~~~~~~L~ 719 (5163)
T PRK12316 641 EGYS-EENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYGLGVGDTVLQKTPFSFDVSVWEFFWPLM 719 (5163)
T ss_pred ccCC-CCCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcCCCCCCEEEeeCCeehHHHHHHHHHHHh
Confidence 0000 011112245779999999999999999999999999998888888889999999999999999999988999999
Q ss_pred cCcEeEEec---CCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCCCCCCCCCeEEEEeCCCCcHHHHHHhH-hc-CCeE
Q 045072 253 VGGTNVCLR---KFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPRSEPLRNPVHILTAGAPPPAAVLFRTE-SL-GFLV 327 (556)
Q Consensus 253 ~g~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~l~~v~~~g~~~~~~~~~~~~-~~-~~~l 327 (556)
.|+++++.+ .+++..+++.++++++|+++++|++++.+.+......++++|.+++|||++++++.+.+. .+ ++++
T Consensus 720 ~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l 799 (5163)
T PRK12316 720 SGARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDEDVASCTSLRRIVCSGEALPADAQEQVFAKLPQAGL 799 (5163)
T ss_pred CCCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhccccccCCCccEEEEeeccCCHHHHHHHHHhCCCCeE
Confidence 999999985 378999999999999999999999999998765556788999999999999999999886 33 7899
Q ss_pred EecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCcccccc
Q 045072 328 SHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYL 407 (556)
Q Consensus 328 ~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~ 407 (556)
++.||+||++..++..... .......++|.|++++ +++|+|+ ++.+++.| +.|||+|+|+++++||+
T Consensus 800 ~n~YG~TE~~~~~~~~~~~---------~~~~~~~~iG~p~~~~-~~~i~d~-~~~~~p~G--~~GEl~i~G~~v~~GYl 866 (5163)
T PRK12316 800 YNLYGPTEAAIDVTHWTCV---------EEGGDSVPIGRPIANL-ACYILDA-NLEPVPVG--VLGELYLAGRGLARGYH 866 (5163)
T ss_pred EeCcCcChheeeeeEEecc---------cccCCCCCCccccCCC-EEEEECC-CCCCCCCC--CceEEEecccccChhhC
Confidence 9999999998654432211 1112235799999999 9999997 68889888 68999999999999999
Q ss_pred CCCCccccCcC------CCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCC
Q 045072 408 KDPNGTRKCMK------DDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEF 481 (556)
Q Consensus 408 ~~~~~~~~~~~------~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~ 481 (556)
++|+.+...|. +++||+|||+|++++||.+++.||.||+||++|++|+|.|||+.|.++|+|.+++|++.+
T Consensus 867 ~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~ik~~G~rI~~~EIE~~l~~~p~V~~a~V~~~~--- 943 (5163)
T PRK12316 867 GRPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQVKLRGLRIELGEIEARLLEHPWVREAAVLAVD--- 943 (5163)
T ss_pred CChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCCEEEEceEEcChHHHHHHHHhCCCcceEEEEEcC---
Confidence 99999988874 346999999999999999999999999999999999999999999999999999999986
Q ss_pred CCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHH
Q 045072 482 WGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKA 547 (556)
Q Consensus 482 ~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 547 (556)
|+.++++|+..++.. ...+++.+++++++++|++|..++++++||+|++||++|++|.+....
T Consensus 944 -~~~lva~vv~~~~~~--~~~~~l~~~l~~~Lp~y~vP~~i~~v~~lP~t~~GKidr~~L~~~~~~ 1006 (5163)
T PRK12316 944 -GKQLVGYVVLESEGG--DWREALKAHLAASLPEYMVPAQWLALERLPLTPNGKLDRKALPAPEAS 1006 (5163)
T ss_pred -CCeEEEEEEccCCCC--CCHHHHHHHHHhhCCCccCCCeEEEHhhCCCCCCCChhHHhhcCcccc
Confidence 567999999876543 568899999999999999999999999999999999999999875443
No 90
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.3e-63 Score=517.30 Aligned_cols=481 Identities=25% Similarity=0.378 Sum_probs=387.3
Q ss_pred HHHHhcCCCCEEEEC--CccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCC
Q 045072 22 RAATVYGDCPSIIYN--NLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLD 99 (556)
Q Consensus 22 ~~~~~~p~~~a~~~~--~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~ 99 (556)
.+++++|+++|+.+. ++++||+||.++++++|..|.++|+++||+|+++++|++++++++|||+++|++++++++.++
T Consensus 5 ~~a~~~p~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~~~~~ 84 (501)
T PRK13390 5 THAQIAPDRPAVIVAETGEQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAINHHLT 84 (501)
T ss_pred hhhhhCCCCcEEEecCCCeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccccCCC
Confidence 467789999999874 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccccccccCCCCC
Q 045072 100 ARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESLVTKGDPNF 179 (556)
Q Consensus 100 ~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (556)
.+++.+++++++++++++++............ ....+.+.... .....+++.......
T Consensus 85 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~------~~~~~~~~~~~--------------~~~~~~~~~~~~~~~-- 142 (501)
T PRK13390 85 APEADYIVGDSGARVLVASAALDGLAAKVGAD------LPLRLSFGGEI--------------DGFGSFEAALAGAGP-- 142 (501)
T ss_pred HHHHHHHHHhcCCcEEEEcchhhhHHHHhhhc------cceEEEecCcc--------------cccccHHHHhcccCC--
Confidence 99999999999999999977543332221111 11111111110 000112221111110
Q ss_pred CCCCCCCCCCcEEEEeccCCCCCCceEEEc--hHHHHHHH----hhhhhhcCCCCCCEEEEecChhhhhhchhhhHhHhc
Q 045072 180 KWIRPQNEWDPMILNYTSGTTSSPKGVVHC--HRGIFVMT----VDSLIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAV 253 (556)
Q Consensus 180 ~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t--~~~~~~~~----~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~ 253 (556)
.....++.++++|||||||.||+|.++ |.++.... ......+.+..++++++.+|++|.+++...+..+..
T Consensus 143 ---~~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~~~~~~~ 219 (501)
T PRK13390 143 ---RLTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRWCSMVHAL 219 (501)
T ss_pred ---CCCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHHHHHHHhc
Confidence 011223579999999999999999964 44443321 111234567889999999999999987665556678
Q ss_pred CcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC----CCCCCCCeEEEEeCCCCcHHHHHHhH-hcCCeEE
Q 045072 254 GGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR----SEPLRNPVHILTAGAPPPAAVLFRTE-SLGFLVS 328 (556)
Q Consensus 254 g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----~~~l~~l~~v~~~g~~~~~~~~~~~~-~~~~~l~ 328 (556)
|+++++.+.+++..+++.++++++|+++++|+++..+.+... ...++++|.++.+|++++.+..+.+. .++..++
T Consensus 220 g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~ 299 (501)
T PRK13390 220 GGTVVLAKRFDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWLGPIVY 299 (501)
T ss_pred CceEEEcCCcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhcCCcee
Confidence 999888888899999999999999999999999999886542 23567899999999999999998887 4688999
Q ss_pred ecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccC
Q 045072 329 HGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLK 408 (556)
Q Consensus 329 ~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~ 408 (556)
+.||+||+++++.... .......+++|.|.++ .++|+|+ ++.+++.| +.|||+++|++++.||++
T Consensus 300 ~~YG~tE~~~~~~~~~----------~~~~~~~~~~G~~~~g--~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gy~~ 364 (501)
T PRK13390 300 EYYSSTEAHGMTFIDS----------PDWLAHPGSVGRSVLG--DLHICDD-DGNELPAG--RIGTVYFERDRLPFRYLN 364 (501)
T ss_pred eeecccccCceEEecc----------hhhccCCCCcCCcccc--eEEEECC-CCCCCCCC--CceEEEEecCCccccccC
Confidence 9999999987554321 1111234578999887 4888996 78888888 789999999999999999
Q ss_pred CCCccccCcCC--CCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeee
Q 045072 409 DPNGTRKCMKD--DGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETP 486 (556)
Q Consensus 409 ~~~~~~~~~~~--~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~ 486 (556)
+++.+...+.. ++|++|||+|++++||.+++.||.+|+|+.+|.+|+|.+||+.|.++|.|.+++|++.+++..|+.+
T Consensus 365 ~~~~t~~~~~~~~~~w~~tGDl~~~~~dg~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~~e~~ 444 (501)
T PRK13390 365 DPEKTAAAQHPAHPFWTTVGDLGSVDEDGYLYLADRKSFMIISGGVNIYPQETENALTMHPAVHDVAVIGVPDPEMGEQV 444 (501)
T ss_pred ChhhhHHhhccCCCceEEcCceEEECCCCeEEEeeccccceeECCeeeCHHHHHHHHHhCCCeeEEEEEeccCcccCcee
Confidence 99988777653 6899999999999999999999999999999999999999999999999999999999998888999
Q ss_pred EEEEEecccccC-CCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHH
Q 045072 487 CAFLSLKAELEK-KPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELR 542 (556)
Q Consensus 487 ~~~v~~~~~~~~-~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~ 542 (556)
++++++.++... ....+++.++++++++.+++|..++++++||+|++||++|++|+
T Consensus 445 ~~~v~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~L~ 501 (501)
T PRK13390 445 KAVIQLVEGIRGSDELARELIDYTRSRIAHYKAPRSVEFVDELPRTPTGKLVKGLLR 501 (501)
T ss_pred EEEEEecCCCCcchhhHHHHHHHHHHhcccCCCCcEEEEeccCCCCCccceehhhcC
Confidence 999887765321 12356899999999999999999999999999999999999874
No 91
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=4.9e-64 Score=613.49 Aligned_cols=497 Identities=22% Similarity=0.276 Sum_probs=419.1
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhcc
Q 045072 9 ANSSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTG 88 (556)
Q Consensus 9 ~~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (556)
.+..+.++.++|.++++++|+++|+++.++++||+||.++++++|++|.+.|+++|++|+|++++++++++++|||+++|
T Consensus 507 ~~~~~~~~~~~~~~~a~~~pd~~Al~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vv~~lail~aG 586 (3956)
T PRK12467 507 TEYAPDCVHQLIEAQARQHPERPALVFGEQVLSYAELNRQANRLAHVLIAAGVGPDVLVGIAVERSIEMVVGLLAVLKAG 586 (3956)
T ss_pred CCCCCCCHHHHHHHHHHHCCCCeEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhC
Confidence 33467899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCccccc
Q 045072 89 AILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTY 168 (556)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (556)
++++|++|.++.+++.++++++++++++++.+....+ .... ...++.+....
T Consensus 587 ~~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~-------~~~~-~~~~~~~~~~~-------------------- 638 (3956)
T PRK12467 587 GAYVPLDPEYPQDRLAYMLDDSGVRLLLTQSHLLAQL-------PVPA-GLRSLCLDEPA-------------------- 638 (3956)
T ss_pred cEEeccCCCChHHHHHHHHHhcCCCEEEechhhhhhc-------cccc-CccEEEecccc--------------------
Confidence 9999999999999999999999999999987543221 1000 11122221110
Q ss_pred ccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchhhh
Q 045072 169 ESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSYPW 248 (556)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~ 248 (556)
+...... ......+..++++++++|||||||.||||+++|+++.+........+++.++++++...|++|..++..++
T Consensus 639 -~~~~~~~-~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~ 716 (3956)
T PRK12467 639 -DLLCGYS-GHNPEVALDPDNLAYVIYTSGSTGQPKGVAISHGALANYVCVIAERLQLAADDSMLMVSTFAFDLGVTELF 716 (3956)
T ss_pred -ccccccC-CCCCCCCCCCCCeEEEEECCCCCCCcCEEEEecHHHHHHHHHHHHhcCCCCCCEEEEecCccHhHHHHHHH
Confidence 0000000 01111234678999999999999999999999999999888888888999999999999999999998899
Q ss_pred HhHhcCcEeEEecC---CCHHHHHHHHHHhCCcEEechhHHHHHHHcCCCCCCCCCCeEEEEeCCCCcHHHHHHhHhc--
Q 045072 249 GMAAVGGTNVCLRK---FDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPRSEPLRNPVHILTAGAPPPAAVLFRTESL-- 323 (556)
Q Consensus 249 ~~~~~g~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~l~~v~~~g~~~~~~~~~~~~~~-- 323 (556)
.++..|+++++.+. .++..+++.|+++++|+++++|++++.+.+........++|.+++|||++++++.+.+.+.
T Consensus 717 ~~L~~G~~lv~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~~ 796 (3956)
T PRK12467 717 GALASGATLHLLPPDCARDAEAFAALMADQGVTVLKIVPSHLQALLQASRVALPRPQRALVCGGEALQVDLLARVRALGP 796 (3956)
T ss_pred HHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEcCHHHHHHHHhhhccccCCcccEEEEEeecCCHHHHHHHHHhCC
Confidence 99999999999874 6899999999999999999999999999876655556778999999999999999998854
Q ss_pred CCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCcc
Q 045072 324 GFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMM 403 (556)
Q Consensus 324 ~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~ 403 (556)
++.++|.||+||++..++....... .......++|.|++++ +++|+|+ ++.+++.| +.|||+|+|++++
T Consensus 797 ~~~l~n~YG~TE~~~~~~~~~~~~~-------~~~~~~~~iG~p~~~~-~~~i~d~-~~~~vp~G--~~GEL~i~G~~v~ 865 (3956)
T PRK12467 797 GARLINHYGPTETTVGVSTYELSDE-------ERDFGNVPIGQPLANL-GLYILDH-YLNPVPVG--VVGELYIGGAGLA 865 (3956)
T ss_pred CCEEEeCcCCChhhhheeeEecccc-------cccCCCCcccCCcCCC-EEEEECC-CCCCCCCC--CceEEEecccccc
Confidence 6899999999999877655432111 0011135799999999 9999997 78889888 7899999999999
Q ss_pred ccccCCCCccccCcCC-------CCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEe
Q 045072 404 LGYLKDPNGTRKCMKD-------DGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVA 476 (556)
Q Consensus 404 ~gy~~~~~~~~~~~~~-------~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~ 476 (556)
+||+++|+.+..+|.. .+||+|||+|++++||.++++||.||+||++|++|+|.+||..|.++|+|.+++|++
T Consensus 866 ~GYl~~p~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~vki~G~rI~~~eIE~~L~~~p~V~~a~v~~ 945 (3956)
T PRK12467 866 RGYHRRPALTAERFVPDPFGADGGRLYRTGDLARYRADGVIEYLGRMDHQVKIRGFRIELGEIEARLLAQPGVREAVVLA 945 (3956)
T ss_pred hhhcCCccccHhhCcCCCCCCCCceeEecCceeEEcCCCcEEEeccccCeEEECCEecCHHHHHHHHHhCCCcceEEEEE
Confidence 9999999999888842 359999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCeeeEEEEEecccc---cCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHH
Q 045072 477 RPDEFWGETPCAFLSLKAEL---EKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKA 547 (556)
Q Consensus 477 ~~~~~~g~~~~~~v~~~~~~---~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 547 (556)
.+.. .+..++++++..... ......+++.++++++++.|++|..++++++||+|++||++|++|++....
T Consensus 946 ~~~~-~~~~lva~vv~~~~~~~~~~~~~~~~l~~~l~~~Lp~y~vP~~~~~l~~lP~t~~GKidR~~L~~~~~~ 1018 (3956)
T PRK12467 946 QPGD-AGLQLVAYLVPAAVADGAEHQATRDELKAQLRQVLPDYMVPAHLLLLDSLPLTPNGKLDRKALPKPDAS 1018 (3956)
T ss_pred EcCC-CCcEEEEEEEecccccccccccCHHHHHHHHHhhCchhcCCceEeeecccCCCCCCCcCHhhcCCcccc
Confidence 6544 466788988855332 123567899999999999999999999999999999999999999876543
No 92
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=4.9e-63 Score=513.98 Aligned_cols=494 Identities=25% Similarity=0.324 Sum_probs=409.4
Q ss_pred HHHHHHH-HHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccC
Q 045072 17 LGFLERA-ATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNIN 95 (556)
Q Consensus 17 ~~~l~~~-~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~ 95 (556)
.++++++ ++.+||++|++..+..+||.||.++++++|.+|.+.|+++|++|+++++|+++++++++||+++|++++|++
T Consensus 7 ~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a~~~~G~~~v~l~ 86 (508)
T TIGR02262 7 EDLLDRNVVEGRGGKTAFIDDISSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLGAIRAGIVPVALN 86 (508)
T ss_pred HHHHHHHHhcccCCceEEEeCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeecc
Confidence 4566665 677999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccccccccC
Q 045072 96 TRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESLVTKG 175 (556)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (556)
+.++.+++.++++.+++++++++.+..+.+.+.....+. ...++...... .....+.+.....
T Consensus 87 ~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--------------~~~~~~~~~~~~~ 149 (508)
T TIGR02262 87 TLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSPH---LEHRVVVGRPE--------------AGEVQLAELLATE 149 (508)
T ss_pred CCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCC---ccEEEEeCCCC--------------cccccHHHHhhcC
Confidence 999999999999999999999998877766655443332 22333332211 0012222222221
Q ss_pred CCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhh-hhhhcCCCCCCEEEEecChhhhhhchh-hhHhHhc
Q 045072 176 DPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVD-SLIDWSIPKQPVYLWTLPMFHANGWSY-PWGMAAV 253 (556)
Q Consensus 176 ~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~pl~~~~g~~~-~~~~~~~ 253 (556)
.... ......++++++++|||||||.||+|.++|+++...+.. ....+++..+|+++..+|++|..++.. ++.++..
T Consensus 150 ~~~~-~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~ 228 (508)
T TIGR02262 150 SEQF-KPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSV 228 (508)
T ss_pred CCcc-CCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHc
Confidence 1111 112244679999999999999999999999999776654 334567889999999999999988855 5566778
Q ss_pred CcEeEEecC-CCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHHHHhH-hcCCeEEe
Q 045072 254 GGTNVCLRK-FDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVLFRTE-SLGFLVSH 329 (556)
Q Consensus 254 g~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~~~~~-~~~~~l~~ 329 (556)
|++.++.++ +++..+++.++++++|.++++|.++..+..... .....++|.++++|+++++++.+.+. .+++++++
T Consensus 229 G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~v~~ 308 (508)
T TIGR02262 229 GATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQVRLRLCTSAGEALPAEVGQRWQARFGVDIVD 308 (508)
T ss_pred CceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCccccccccccceeEEEcCCCCCHHHHHHHHHHhCCchhh
Confidence 888877764 689999999999999999999999988876543 23456899999999999999998888 56899999
Q ss_pred cccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccCC
Q 045072 330 GYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKD 409 (556)
Q Consensus 330 ~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~ 409 (556)
.||+||++.++..+... ....+++|.|.++. .++|+|+ ++.+++.+ +.|||+++|++++.||+++
T Consensus 309 ~YG~tE~~~~~~~~~~~-----------~~~~~~~G~~~~g~-~v~i~d~-~~~~~~~g--~~Gel~i~~~~~~~gY~~~ 373 (508)
T TIGR02262 309 GIGSTEMLHIFLSNLPG-----------DVRYGTSGKPVPGY-RLRLVGD-GGQDVAAG--EPGELLISGPSSATMYWNN 373 (508)
T ss_pred CccccccCceeecCCcc-----------CCCCCCcCCCCCCc-EEEEECC-CCCCCCCC--CeeEEEEecCccccccCCC
Confidence 99999998765543211 11235789999998 9999995 78888887 6899999999999999999
Q ss_pred CCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEE
Q 045072 410 PNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAF 489 (556)
Q Consensus 410 ~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~ 489 (556)
++.+...|. ++||+|||+++++++|.+++.||.+|+++.+|.++++.+||+.+.++++|.++++++..+...++.++++
T Consensus 374 ~~~~~~~~~-~~~~~TGD~~~~~~~g~~~~~gR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~ 452 (508)
T TIGR02262 374 RAKTRDTFQ-GEWTRSGDKYVRNDDGSYTYAGRTDDMLKVSGIYVSPFEIESALIQHPAVLEAAVVGVEDEDGLIKPKAF 452 (508)
T ss_pred HHHhHhhhh-cCceeccceEEEcCCccEEEeccccceeeeCCEEECHHHHHHHHHhCCCeeEEEEEeccccCCCceeEEE
Confidence 998888776 8999999999999999999999999999999999999999999999999999999998877777788888
Q ss_pred EEeccccc-CCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHH
Q 045072 490 LSLKAELE-KKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREM 544 (556)
Q Consensus 490 v~~~~~~~-~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~ 544 (556)
++..+... .+...+++.+.++++++++++|..++++++||+|++||++|+.|++|
T Consensus 453 v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~~ 508 (508)
T TIGR02262 453 IVLRPGQDIDTALETELKEHVKDRLAPYKYPRWIVFVDDLPKTATGKIQRFKLREG 508 (508)
T ss_pred EEeCCCCccccccHHHHHHHHHHhcccCCCCceEEEecCCCCCCCCcEehhhccCC
Confidence 88766532 12457889999999999999999999999999999999999998753
No 93
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=9.1e-64 Score=507.78 Aligned_cols=431 Identities=20% Similarity=0.225 Sum_probs=360.5
Q ss_pred cccHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEE
Q 045072 39 IYTWSQTHRRCLQLASSLSSIGI-TRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLV 117 (556)
Q Consensus 39 ~~Ty~~l~~~~~~la~~L~~~g~-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 117 (556)
-+.|+||.+++.++|.+|++.|+ ++|++|+++++|++++++++|||+++|++++|++|.++.+++.+++++++++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~ 98 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWG 98 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEe
Confidence 47799999999999999999988 57999999999999999999999999999999999999999999999999999998
Q ss_pred eccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccccccccCCCCCCCCCCCCCCCcEEEEecc
Q 045072 118 DYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTS 197 (556)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~Ts 197 (556)
+.+.... . . .. .. . . .....++++++++|||
T Consensus 99 ~~~~~~~-------------~-----~-~~------------------~~------~--~----~~~~~~~~~~~i~~TS 129 (452)
T PRK07445 99 LDQLKLS-------------H-----P-PP------------------LP------S--Q----GILPNLETGWIMIPTG 129 (452)
T ss_pred cCccccc-------------c-----C-CC------------------CC------c--c----ccCCCCCCcEEEEeCC
Confidence 7653210 0 0 00 00 0 0 0012457999999999
Q ss_pred CCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecCCCHHHHHHHHHHhCC
Q 045072 198 GTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRKFDAAVIYKMIRQHGV 277 (556)
Q Consensus 198 GTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~ 277 (556)
||||.||+|.+||+++..........+++.+ ++.++.+|++|.+|+...+.++..|+++++.+............++++
T Consensus 130 GTTG~PKgV~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~ 208 (452)
T PRK07445 130 GSSGQIRFAIHTWETLTASVQGFQRYFQLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYKRLKSGQELPPNPSD 208 (452)
T ss_pred CCCCCCcEEEechHHHHHHHHHHHHHhcCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChHhccchhhhhhhcCc
Confidence 9999999999999999877766665556654 457889999999999888889999999988763222222344457899
Q ss_pred cEEechhHHHHHHHcCCCCCCCCCCeEEEEeCCCCcHHHHHHhHhcCCeEEecccccccccceeeccccccccCCChhhh
Q 045072 278 THMCGAPVVLNMISNLPRSEPLRNPVHILTAGAPPPAAVLFRTESLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATER 357 (556)
Q Consensus 278 t~~~~~p~~~~~l~~~~~~~~l~~l~~v~~~g~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~ 357 (556)
++++++|++++.+.+.. ...++++|.+++||++++++..+.+.+.++++++.||+||++..++.... ...
T Consensus 209 t~~~~vP~~l~~l~~~~-~~~l~~l~~i~~gG~~l~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~---------~~~ 278 (452)
T PRK07445 209 FFLSLVPTQLQRLLQLR-PQWLAQFRTILLGGAPAWPSLLEQARQLQLRLAPTYGMTETASQIATLKP---------DDF 278 (452)
T ss_pred eEEEehHHHHHHHHhhC-hhhhhcceEEEECCccCCHHHHHHHHhcCCeEecCcchhhhcccccccCc---------hhh
Confidence 99999999999998632 34578999999999999999998888778999999999999765433211 111
Q ss_pred ccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccCCCCccccCcCCCCceecCceEEEecCCcE
Q 045072 358 ARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYL 437 (556)
Q Consensus 358 ~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l 437 (556)
.....++|.|.++. +++|++ + +.|||+++|++++.||++++. ..++||+|||+|++|+||++
T Consensus 279 ~~~~~~~G~~~p~~-~v~i~~---------g--~~Gel~v~g~~~~~gY~~~~~------~~~g~~~TGDl~~~d~dG~l 340 (452)
T PRK07445 279 LAGNNSSGQVLPHA-QITIPA---------N--QTGNITIQAQSLALGYYPQIL------DSQGIFETDDLGYLDAQGYL 340 (452)
T ss_pred ccCCCcCCccCCCC-eEEEcC---------C--CcceEEEeCCccchhhcCCcc------CCCCEEECCCEEEEcCCCCE
Confidence 12235789999998 888872 2 579999999999999998643 23799999999999999999
Q ss_pred EEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCc
Q 045072 438 EIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYM 517 (556)
Q Consensus 438 ~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~ 517 (556)
++.||.+|+|+.+|++|+|.+||+.|.++|+|.+++|++.+++..|+.++++++..++. .+.+++.+++++++++|+
T Consensus 341 ~~~GR~dd~I~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~~~~~~g~~~~a~vv~~~~~---~~~~~l~~~~~~~L~~~~ 417 (452)
T PRK07445 341 HILGRNSQKIITGGENVYPAEVEAAILATGLVQDVCVLGLPDPHWGEVVTAIYVPKDPS---ISLEELKTAIKDQLSPFK 417 (452)
T ss_pred EEEeecCCEEEECCEEECHHHHHHHHHhCCCcceEEEEeccCcCCCcEEEEEEEeCCCC---CCHHHHHHHHHHhCCccc
Confidence 99999999999999999999999999999999999999999998899999998876542 467899999999999999
Q ss_pred ccceeEEecCCCCCCCCCccHHHHHHHHHHhcc
Q 045072 518 VPKTVVFKEELPKTSTGKIKKFELREMAKAMGK 550 (556)
Q Consensus 518 ~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~~~ 550 (556)
+|..++++++||+|++||++|++|++++.+++.
T Consensus 418 ~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~~ 450 (452)
T PRK07445 418 QPKHWIPVPQLPRNPQGKINRQQLQQIAVQRLG 450 (452)
T ss_pred CCeEEEEecCCCCCCCcccCHHHHHHHHHHhhC
Confidence 999999999999999999999999999988764
No 94
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=3.1e-64 Score=624.42 Aligned_cols=491 Identities=20% Similarity=0.224 Sum_probs=415.9
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 045072 11 SSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAI 90 (556)
Q Consensus 11 ~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (556)
....++.+.|.++++.+|+++|+++.++++||+||.++++++|.+|.+.|+++|++|+|+++|++++++++|||+++|++
T Consensus 2000 ~~~~~~~~~~~~~a~~~p~~~A~~~~~~~lTy~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~~~~~lAil~aGa~ 2079 (5163)
T PRK12316 2000 PRGPGVHQRIAEQAARAPEAIAVVFGDQHLSYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFELVVALLAVLKAGGA 2079 (5163)
T ss_pred CCCCCHHHHHHHHHHhCCCCeEEEcCCCeEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhceE
Confidence 34458999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCccccccc
Q 045072 91 LNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYES 170 (556)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (556)
++|++|.++.+++.++++++++++++++.+....+.. .. ....+.+.... .+..
T Consensus 2080 ~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~-------~~-~~~~~~~~~~~------------------~~~~ 2133 (5163)
T PRK12316 2080 YVPLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPL-------PA-GVARLPLDRDA------------------EWAD 2133 (5163)
T ss_pred EeecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhccc-------cc-ccceEeccchh------------------hhhc
Confidence 9999999999999999999999999998765432210 00 01111111100 0000
Q ss_pred ccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchhhhHh
Q 045072 171 LVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSYPWGM 250 (556)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~ 250 (556)
. ..........++++++++|||||||.||||+++|+++.+.+......+++.++++++...|++|+.++..++.+
T Consensus 2134 ----~-~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~ 2208 (5163)
T PRK12316 2134 ----Y-PDTAPAVQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERYELSPADCELQFMSFSFDGAHEQWFHP 2208 (5163)
T ss_pred ----c-CccCCCCCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhcCCCCcceEEEecCchHHHHHHHHHHH
Confidence 0 00011123467899999999999999999999999999988888888899999999999999999888889999
Q ss_pred HhcCcEeEEecC--CCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC-CCCCCCCeEEEEeCCCCcHHHHHHhHh-c-CC
Q 045072 251 AAVGGTNVCLRK--FDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR-SEPLRNPVHILTAGAPPPAAVLFRTES-L-GF 325 (556)
Q Consensus 251 ~~~g~~~~~~~~--~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~-~~~l~~l~~v~~~g~~~~~~~~~~~~~-~-~~ 325 (556)
+..|+++++.+. +++..+++.++++++|+++++|++++.+.+... .....++|.+++|||+++++..+++.+ + +.
T Consensus 2209 L~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~ 2288 (5163)
T PRK12316 2209 LLNGARVLIRDDELWDPEQLYDEMERHGVTILDFPPVYLQQLAEHAERDGRPPAVRVYCFGGEAVPAASLRLAWEALRPV 2288 (5163)
T ss_pred HhCCCEEEeCCcccCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhcccCCcceeEEEEecccCCHHHHHHHHHhCCCc
Confidence 999999966653 689999999999999999999999999987543 223458999999999999999998874 3 67
Q ss_pred eEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCcccc
Q 045072 326 LVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLG 405 (556)
Q Consensus 326 ~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~g 405 (556)
.+++.||+||++..++....... ........++|.|+++. +++|+|+ ++.+++.| ..|||+|+|+++++|
T Consensus 2289 ~l~n~YG~TE~~~~~~~~~~~~~------~~~~~~~~~iG~p~~~~-~~~i~d~-~~~~vp~g--~~GEl~i~G~~v~~G 2358 (5163)
T PRK12316 2289 YLFNGYGPTEAVVTPLLWKCRPQ------DPCGAAYVPIGRALGNR-RAYILDA-DLNLLAPG--MAGELYLGGEGLARG 2358 (5163)
T ss_pred EEEECccchhheeeeeeeecccc------cccCCCcCCcccccCCC-EEEEECC-CCCCCCCC--CeeEEEecchhhccc
Confidence 89999999999876554322111 01111125799999999 9999997 68899888 789999999999999
Q ss_pred ccCCCCccccCcCC-------CCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeec
Q 045072 406 YLKDPNGTRKCMKD-------DGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARP 478 (556)
Q Consensus 406 y~~~~~~~~~~~~~-------~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~ 478 (556)
|+++|+.+...|.. ++||+|||+|++++||.++++||.||+||++|++|++.|||..|.++|+|.+++|++.+
T Consensus 2359 Y~~~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rie~~eIE~~l~~~~~v~~a~v~~~~ 2438 (5163)
T PRK12316 2359 YLNRPGLTAERFVPDPFSASGERLYRTGDLARYRADGVVEYLGRIDHQVKIRGFRIELGEIEARLQAHPAVREAVVVAQD 2438 (5163)
T ss_pred ccCChhhhhhhccCCCCCCCCCeeEecccEEEEcCCCcEEEecCCCCeEEEcCccCChHHHHHHHhhCcccceEEEEEEe
Confidence 99999999888842 46999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHH
Q 045072 479 DEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMA 545 (556)
Q Consensus 479 ~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~ 545 (556)
++ .++.++++|+..++.. ...+++.++++++|+.|++|..++++++||+|++||++|++|++..
T Consensus 2439 ~~-~~~~l~a~v~~~~~~~--~~~~~l~~~l~~~Lp~~~vP~~~~~l~~lP~t~~GKidR~~L~~~~ 2502 (5163)
T PRK12316 2439 GA-SGKQLVAYVVPDDAAE--DLLAELRAWLAARLPAYMVPAHWVVLERLPLNPNGKLDRKALPKPD 2502 (5163)
T ss_pred cC-CCeEEEEEEEecCCCc--cCHHHHHHHHHhhCchhcCcceEeeecccCCCCCCccCHhhcCCCc
Confidence 66 6788999998876544 6788999999999999999999999999999999999999997654
No 95
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.9e-62 Score=513.86 Aligned_cols=514 Identities=27% Similarity=0.399 Sum_probs=409.8
Q ss_pred CCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCChHHHHHHHHHhhhccceE
Q 045072 13 PLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSS-IGITRGHVVSVVAPNIPAMYEAHFAIPFTGAIL 91 (556)
Q Consensus 13 ~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~-~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 91 (556)
..++.++|..+++.+|+++|+++.++++||.||.++++++|.+|++ .|+++|++|+++++|+++++++++||+++|+++
T Consensus 22 ~~~l~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 101 (560)
T PRK08974 22 YQSLVDMFEQAVARYADQPAFINMGEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRAGMIV 101 (560)
T ss_pred cccHHHHHHHHHHhCCCCceEEECCccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEE
Confidence 3579999999999999999999999999999999999999999985 899999999999999999999999999999999
Q ss_pred eccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCC--CCCC----------CCCccc
Q 045072 92 NNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTD--HDND----------NKSSQT 159 (556)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----------~~~~~~ 159 (556)
+|++|.++.+++.++++.++++.++++.+..+.+........ ...++....... .... ....+.
T Consensus 102 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (560)
T PRK08974 102 VNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKTP----VKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPK 177 (560)
T ss_pred eccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhcC----cceEEEecccccccccccccccchhhhccccccc
Confidence 999999999999999999999999998876655554432211 111221111000 0000 000000
Q ss_pred cCCCcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhc---CCCCCCEEEEec
Q 045072 160 VDSNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDW---SIPKQPVYLWTL 236 (556)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 236 (556)
...+....+.+.+...............+++++++|||||||.||+|.++|.++..+.......+ .....+.++..+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (560)
T PRK08974 178 YHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVVTAL 257 (560)
T ss_pred ccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEEEeC
Confidence 00011111122222111111111124568999999999999999999999999977654332222 234466788899
Q ss_pred Chhhhhhchh-hhHhHhcCcEeEEec-CCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCC
Q 045072 237 PMFHANGWSY-PWGMAAVGGTNVCLR-KFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPP 312 (556)
Q Consensus 237 pl~~~~g~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~ 312 (556)
|++|.+++.. .+..+..|++.++.. +.++..+++.++++++|.++++|++++.+..... ...++++|.+++||+++
T Consensus 258 p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~ 337 (560)
T PRK08974 258 PLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSLKLSVGGGMAV 337 (560)
T ss_pred cHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccceeEEEecCccC
Confidence 9999988654 556677888877664 5688999999999999999999999999987654 34567899999999999
Q ss_pred cHHHHHHhHh-cCCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCe
Q 045072 313 PAAVLFRTES-LGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGAS 391 (556)
Q Consensus 313 ~~~~~~~~~~-~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~ 391 (556)
++.+..++.+ +++.+++.||+||++..+..+.... .....++|.|.+++ .++|+|+ ++.+++.+ +
T Consensus 338 ~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~~G~~~~~~-~~~i~~~-~~~~~~~g--~ 403 (560)
T PRK08974 338 QQAVAERWVKLTGQYLLEGYGLTECSPLVSVNPYDL----------DYYSGSIGLPVPST-EIKLVDD-DGNEVPPG--E 403 (560)
T ss_pred CHHHHHHHHHHhCCcEEeeecccccCceeeccCCCC----------cccCCccccCcCCC-EEEEECC-CCCCCCCC--C
Confidence 9999988874 6899999999999987665543211 11235789999999 9999997 68888887 6
Q ss_pred eeEEEEecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccc
Q 045072 392 LGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNE 471 (556)
Q Consensus 392 ~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~ 471 (556)
.|||+++|+.++.||+++++.+...|. +|||+|||+++++++|.+++.||.+|+|+.+|.++++.+||+.|.++|+|.+
T Consensus 404 ~Gel~v~g~~~~~gy~~~~~~~~~~~~-~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~IE~~l~~~~~v~~ 482 (560)
T PRK08974 404 PGELWVKGPQVMLGYWQRPEATDEVIK-DGWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMLHPKVLE 482 (560)
T ss_pred ceEEEEecCCcchhhcCChhhhhhhhh-cCCcccCCEEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCeeE
Confidence 899999999999999999998887775 8999999999999999999999999999999999999999999999999999
Q ss_pred cEEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHh
Q 045072 472 AAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAM 548 (556)
Q Consensus 472 ~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 548 (556)
++|++.+++..|+.++++++..+. . ...+++.+++.++++.++.|..+.++++||+|++||++|+.|++...++
T Consensus 483 ~~v~~~~~~~~g~~~~~~v~~~~~-~--~~~~~l~~~l~~~l~~~~~P~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 556 (560)
T PRK08974 483 VAAVGVPSEVSGEAVKIFVVKKDP-S--LTEEELITHCRRHLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARAK 556 (560)
T ss_pred EEEEeeecCCcceEEEEEEECCCC-C--CCHHHHHHHHHhhcccccCCcEEEEhhhCCCCCCCcEeHHHHHHHHHhh
Confidence 999999988888877777765432 2 4677899999999999999999999999999999999999999887664
No 96
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=3.5e-64 Score=496.37 Aligned_cols=524 Identities=23% Similarity=0.249 Sum_probs=417.1
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCEEEECC--------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHH
Q 045072 10 NSSPLTPLGFLERAATVYGDCPSIIYNN--------LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAH 81 (556)
Q Consensus 10 ~~~~~t~~~~l~~~~~~~p~~~a~~~~~--------~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~ 81 (556)
+..+.|+++.+.+.++.+++.+++.... +.+||.|..+++.++|.+|++.|+++++.|+|++-|+++|+++.
T Consensus 71 ~~~~~T~~~~f~~~~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis~ 150 (691)
T KOG1256|consen 71 FDGPLTLYEGFRRSVEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIISE 150 (691)
T ss_pred CCCcccHHHHhhcchhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChhhHHhH
Confidence 4678999999999999999999997743 67999999999999999999999999999999999999999999
Q ss_pred HHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEe-ccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCcccc
Q 045072 82 FAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVD-YQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTV 160 (556)
Q Consensus 82 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (556)
+||...|++.|||...++++.+.++++++.+.++|++ ++....+.+..... .....+.++.+....+... .....
T Consensus 151 ~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~-~~~~LK~iI~~~~~~~~~~---~~~~~ 226 (691)
T KOG1256|consen 151 MACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKEND-SLPSLKAIIQLDEPSDELK---EKAEN 226 (691)
T ss_pred HHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccc-cCccceeEEEecCCchhhh---hhhhc
Confidence 9999999999999999999999999999999999999 44455444443321 1112455666665543211 01111
Q ss_pred CCCcccccccccccCCCCCCCC-CCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhh---hhhhc---CCCCCCEEE
Q 045072 161 DSNFCCTYESLVTKGDPNFKWI-RPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVD---SLIDW---SIPKQPVYL 233 (556)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~---~~~~~---~~~~~~~~~ 233 (556)
......+|++++..+......+ .+..++|.|.|.|||||||.||||++||+|+.+..+. ..... .....|+.+
T Consensus 227 ~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~l 306 (691)
T KOG1256|consen 227 NGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVYL 306 (691)
T ss_pred CCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceEE
Confidence 2233688999999886555444 4778999999999999999999999999999875432 11111 223469999
Q ss_pred EecChhhhhhchhhhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC------------------
Q 045072 234 WTLPMFHANGWSYPWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR------------------ 295 (556)
Q Consensus 234 ~~~pl~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~------------------ 295 (556)
+++||.|++........+..|+++.+.. .|+..+.+.+++.+||.+.++|..++++.+...
T Consensus 307 SyLPLAHi~er~~~~~~~~~G~~IgF~~-gD~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~ 385 (691)
T KOG1256|consen 307 SYLPLAHIFERVVELYTFYIGAKIGFAR-GDILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAM 385 (691)
T ss_pred EeCcHHHHHHHHHHHhHhhcccEEEEec-CChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 9999999999998888888899988876 688999999999999999999999866643320
Q ss_pred -------------C----------------CCCCCCeEEEEeCCCCcHHHHHHhH-hcCCeEEecccccccccceeeccc
Q 045072 296 -------------S----------------EPLRNPVHILTAGAPPPAAVLFRTE-SLGFLVSHGYGLTETAGLVVSCAW 345 (556)
Q Consensus 296 -------------~----------------~~l~~l~~v~~~g~~~~~~~~~~~~-~~~~~l~~~yG~tE~~~~~~~~~~ 345 (556)
+ .-..++|.+++|++|++++....++ .+++.|+++||+||+++.++....
T Consensus 386 ~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g~~v~eGYGlTEts~g~~~~~~ 465 (691)
T KOG1256|consen 386 AYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALGCRVLEGYGLTETSAGTTLTLP 465 (691)
T ss_pred HHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcCceeeecccccccCCceEeccC
Confidence 0 0113689999999999999999999 557999999999999855544321
Q ss_pred cccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccCCCCccccCcCCCCceec
Q 045072 346 KNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYT 425 (556)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~T 425 (556)
.....+++|.|++++ +++++|...-.....+ ..|||+|+|+.+|.|||++|+.|.+.+++|||++|
T Consensus 466 -----------~d~~lgsvG~p~p~~-~vKL~dvpe~ny~a~~--~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhT 531 (691)
T KOG1256|consen 466 -----------GDNVLGSVGPPVPGN-EVKLVDVPEMNYDADG--SKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHT 531 (691)
T ss_pred -----------CCCCCCCcCCcccCc-eEEEechHHhCcCcCC--CcceEEEecchhceeccCChHHHhhhhcccccccc
Confidence 112468999999999 9999997555555555 36999999999999999999999999999999999
Q ss_pred CceEEEecCCcEEEEccCCCeEe-eCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEecccccC------
Q 045072 426 GDVGVIHADGYLEIKDRSKDVII-SGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEK------ 498 (556)
Q Consensus 426 GD~~~~~~dg~l~~~GR~~d~i~-~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~------ 498 (556)
||+|+++++|.+.+.||.++.|| ..|+.|.|+.||++..+.+.|.+.+|.+.... ..++++|+++++...
T Consensus 532 GDiG~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~~~~~V~qi~V~g~s~~---~~LvaiVvpd~e~~~~~a~~~ 608 (691)
T KOG1256|consen 532 GDIGEWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQIFVLGDSLR---SFLVAIVVPDPEVLKSWAAKD 608 (691)
T ss_pred ccceeECCCccEEEEecccceEEcCCCCccChHHHHHHHhcCCceEEEEEECCcch---hcEEEEEecChhhchhhHHHc
Confidence 99999999999999999999999 88999999999999999999999999988754 358999999765431
Q ss_pred ------------CCCHHHHHHHHHh-----cCCCCcccceeEEec------CCCCCCCCCccHHHHHHHHHHhccccccC
Q 045072 499 ------------KPTEKEIIEYCRA-----RLPRYMVPKTVVFKE------ELPKTSTGKIKKFELREMAKAMGKSKVSR 555 (556)
Q Consensus 499 ------------~~~~~~i~~~l~~-----~l~~~~~p~~~~~v~------~lP~t~~GKv~r~~l~~~~~~~~~~~~~~ 555 (556)
....+.+++.+.+ .+..+.....+.+.+ .=-+||+-|.+|..+.+.|..+++.-|..
T Consensus 609 ~~~~~~eelc~n~~~k~~vl~el~~~~~~~~l~~fe~vk~v~l~~~~FsienglltPTlK~KR~~l~~~yk~~Id~mY~~ 688 (691)
T KOG1256|consen 609 GVKGTFEELCRNLDVKEAVLSELVKVGKENGLKGFEQVKKVHLLPDPFSIENGLLTPTLKIKRPQLLKYYKKQIDELYKE 688 (691)
T ss_pred cCchhHHHHhcChhhHHHHHHHHHHHHhhhhccChhhEeeEEEecccccccCCccchhhhhhhHHHHHHHHHHHHHHHhh
Confidence 0011122222222 244555555565533 33378999999999999999999887754
No 97
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=7.8e-63 Score=505.38 Aligned_cols=453 Identities=25% Similarity=0.321 Sum_probs=386.0
Q ss_pred CHHHHH-HHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEec
Q 045072 15 TPLGFL-ERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNN 93 (556)
Q Consensus 15 t~~~~l-~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 93 (556)
++.+++ ..+++.+|+++|+.+.++++||.||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|+++++
T Consensus 3 ~~~~~~~~~~a~~~~~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v~ 82 (458)
T PRK09029 3 IFSDWPWRHWAQVRPQAIALRLNDEVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARVLP 82 (458)
T ss_pred hhhcChHHHHHHhCCCceeeecCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEee
Confidence 344444 5568899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccccccc
Q 045072 94 INTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESLVT 173 (556)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (556)
+++..+.+++..+++++++++++++.+.... .. +. ... ...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~----~~------~~~-------------------------~~~--- 123 (458)
T PRK09029 83 LNPQLPQPLLEELLPSLTLDFALVLEGENTF-SA----LT------SLH-------------------------LQL--- 123 (458)
T ss_pred cCCCCCHHHHHHHHHhcCCCEEEEcCcccch-hh----cc------ccc-------------------------ccc---
Confidence 9999999999999999999999987764321 00 00 000 000
Q ss_pred cCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchhhhHhHhc
Q 045072 174 KGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAV 253 (556)
Q Consensus 174 ~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~ 253 (556)
... .......++++++++|||||||.||+|.++|++++.........++...+++++..+|++|.+|+...+.++..
T Consensus 124 ~~~---~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~l~~ 200 (458)
T PRK09029 124 VEG---AHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTAQDSWLLSLPLFHVSGQGIVWRWLYA 200 (458)
T ss_pred ccc---cCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCccceEEEecCcHhhhhhHHHHHHHhC
Confidence 000 00112456789999999999999999999999999888877777888999999999999999998777778889
Q ss_pred CcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCCCCCCCCCeEEEEeCCCCcHHHHHHhHhcCCeEEecccc
Q 045072 254 GGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPRSEPLRNPVHILTAGAPPPAAVLFRTESLGFLVSHGYGL 333 (556)
Q Consensus 254 g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~l~~v~~~g~~~~~~~~~~~~~~~~~l~~~yG~ 333 (556)
|+++++.+. ..+++.+. ++|.+..+|+++..+...... ..++|.+++||+++++.+.+.+.+.++++++.||+
T Consensus 201 G~~v~~~~~---~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~--~~~l~~i~~gG~~~~~~~~~~~~~~g~~~~~~YG~ 273 (458)
T PRK09029 201 GATLVVRDK---QPLEQALA--GCTHASLVPTQLWRLLDNRSE--PLSLKAVLLGGAAIPVELTEQAEQQGIRCWCGYGL 273 (458)
T ss_pred CceEEeCCh---HHHHHHHh--hceeeecChHHHHHHHhcccc--CCcceEEEECCCCCCHHHHHHHHHcCCcEeccccc
Confidence 999887654 55677774 789999999999999876533 45799999999999999999988889999999999
Q ss_pred cccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccCCCCcc
Q 045072 334 TETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGT 413 (556)
Q Consensus 334 tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~ 413 (556)
||++...+.... ....++|.|.+++ .++|++ |||+++|+.++.||+++++.+
T Consensus 274 tE~~~~~~~~~~-------------~~~~~~G~~~~~~-~~~i~~--------------gel~v~g~~~~~gY~~~~~~~ 325 (458)
T PRK09029 274 TEMASTVCAKRA-------------DGLAGVGSPLPGR-EVKLVD--------------GEIWLRGASLALGYWRQGQLV 325 (458)
T ss_pred cccCcceeccCC-------------CCCCCCCCCCCCC-EEEEeC--------------CEEEEecCceeeeeecCcccc
Confidence 999865443210 0124689999998 888865 899999999999999998877
Q ss_pred ccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEec
Q 045072 414 RKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLK 493 (556)
Q Consensus 414 ~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~ 493 (556)
.... .+|||+|||+|+++ ||++++.||++|+|+.+|.+|+|.+||+.|.++|+|.+++|++.+++..|+.++++|+..
T Consensus 326 ~~~~-~~~~~~TGD~~~~~-~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~ 403 (458)
T PRK09029 326 PLVN-DEGWFATRDRGEWQ-NGELTILGRLDNLFFSGGEGIQPEEIERVINQHPLVQQVFVVPVADAEFGQRPVAVVESD 403 (458)
T ss_pred cccc-CCCccCCCCcEEEe-CCEEEEecccccceeeCCEEeCHHHHHHHHhcCCCcceEEEEccCCcccCceEEEEEEcC
Confidence 5444 48999999999999 999999999999999999999999999999999999999999999998899999988876
Q ss_pred ccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHhcc
Q 045072 494 AELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMGK 550 (556)
Q Consensus 494 ~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~~~ 550 (556)
.. .+.+++.+++++++++|++|..+++++++|+|.+||++|+.|++++.+...
T Consensus 404 ~~----~~~~~l~~~~~~~l~~~~~P~~~~~~~~~p~t~~gKi~r~~L~~~~~~~~~ 456 (458)
T PRK09029 404 SE----AAVVNLAEWLQDKLARFQQPVAYYLLPPELKNGGIKISRQALKEWVAQQLG 456 (458)
T ss_pred cc----cCHHHHHHHHHhhchhccCCeEEEEecccccCcCCCcCHHHHHHHHHhccC
Confidence 32 578899999999999999999999999999999999999999999987654
No 98
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=2.1e-63 Score=613.30 Aligned_cols=499 Identities=17% Similarity=0.186 Sum_probs=418.4
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhc
Q 045072 8 TANSSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFT 87 (556)
Q Consensus 8 ~~~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~ 87 (556)
.......++.++|.++++++|+++|+++.+.++||+||.++++++|..|.+.|+++|++|+|++++++++++++|||+++
T Consensus 3714 ~~~~~~~~~~~~~~~~~~~~p~~~Av~~~~~~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~lavlka 3793 (4334)
T PRK05691 3714 RDYPLEQSYVRLFEAQVAAHPQRIAASCLDQQWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVGSFKA 3793 (4334)
T ss_pred CCCccccCHHHHHHHHHHhCCCceEEEcCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhh
Confidence 33344569999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccc
Q 045072 88 GAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCT 167 (556)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (556)
|++++||+|.++.+++.++++++++++++++..+..........+.... .+.++...+..
T Consensus 3794 G~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~------------------- 3853 (4334)
T PRK05691 3794 GAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCAN-RPRLLVWEEVQ------------------- 3853 (4334)
T ss_pred CcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhccccccc-ccceeeecccc-------------------
Confidence 9999999999999999999999999999999876654443332221100 11121111100
Q ss_pred cccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchhh
Q 045072 168 YESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSYP 247 (556)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~ 247 (556)
..............+++.+|++|||||||.||||+++|+++.+.+......+++.++++++...+++++.++..+
T Consensus 3854 -----~~~~~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~s~~fd~s~~~~ 3928 (4334)
T PRK05691 3854 -----AGEVASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLALSEADVIAQTASQSFDISVWQF 3928 (4334)
T ss_pred -----cccccccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhcCCCccceEEEecCCchhHHHHHH
Confidence 000000111122457899999999999999999999999999998888888899999999999999999999999
Q ss_pred hHhHhcCcEeEEecC---CCHHHHHHHHHHhCCcEEechhHHHHHHHcCCCCCCCCCCeEEEEeCCCCcHHHHHHhHhc-
Q 045072 248 WGMAAVGGTNVCLRK---FDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPRSEPLRNPVHILTAGAPPPAAVLFRTESL- 323 (556)
Q Consensus 248 ~~~~~~g~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~l~~v~~~g~~~~~~~~~~~~~~- 323 (556)
+.++..|+++++++. .++..+++.++++++|++.++|+++..++... ...++++|.+++|||++++++.++|.+.
T Consensus 3929 ~~~l~~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~-~~~~~~lr~~~~gGe~l~~~~~~~~~~~~ 4007 (4334)
T PRK05691 3929 LAAPLFGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAED-RQALDGLRWMLPTGEAMPPELARQWLQRY 4007 (4334)
T ss_pred HHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhc-cccCCCceEEEecCCcCCHHHHHHHHHhC
Confidence 999999999998874 57899999999999999999999999887543 3457899999999999999999988743
Q ss_pred -CCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCc
Q 045072 324 -GFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSM 402 (556)
Q Consensus 324 -~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~ 402 (556)
++.++|.||+||++..+........ .......++|.|+++. .+.|+|+ .+.+++.| ..|||+|+|+.+
T Consensus 4008 ~~~~l~n~YG~TE~t~~~~~~~~~~~-------~~~~~~~~iG~p~~~~-~~~v~d~-~~~~~p~g--~~GEL~i~G~~v 4076 (4334)
T PRK05691 4008 PQIGLVNAYGPAECSDDVAFFRVDLA-------STRGSYLPIGSPTDNN-RLYLLDE-ALELVPLG--AVGELCVAGTGV 4076 (4334)
T ss_pred CCCeEEeCccCccceeEEEEEEcccc-------cccCCcCCCCCccCCC-EEEEECC-CCCCCCCC--CceEEEEecccc
Confidence 7899999999999876654322111 0111224699999999 9999996 78889988 689999999999
Q ss_pred cccccCCCCccccCcC-------CCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEE
Q 045072 403 MLGYLKDPNGTRKCMK-------DDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVV 475 (556)
Q Consensus 403 ~~gy~~~~~~~~~~~~-------~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~ 475 (556)
++||+++|+.+..+|. +++||+|||+|++++||.++++||.|++||++|.+|.+.|||+.|.++|+|.+++|+
T Consensus 4077 ~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~riel~eIE~~l~~~~~v~~a~v~ 4156 (4334)
T PRK05691 4077 GRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRIDHQVKIRGYRIELGEIEARLHEQAEVREAAVA 4156 (4334)
T ss_pred cccccCCcccchhhcccCCCCCCCceeeccCcceeecCCCcEEEecccCCcEEeceEEecHHHHHHHHHhCCCccEEEEE
Confidence 9999999999999884 357999999999999999999999999999999999999999999999999999887
Q ss_pred eecCCCCCeeeEEEEEecccccC-CCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHH
Q 045072 476 ARPDEFWGETPCAFLSLKAELEK-KPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREM 544 (556)
Q Consensus 476 ~~~~~~~g~~~~~~v~~~~~~~~-~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~ 544 (556)
.... ..+..++++++....... ....++++++++++||.|++|..++.+++||+|+|||++|++|++.
T Consensus 4157 ~~~~-~~~~~l~a~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~~~~lP~t~~GKidr~~L~~~ 4225 (4334)
T PRK05691 4157 VQEG-VNGKHLVGYLVPHQTVLAQGALLERIKQRLRAELPDYMVPLHWLWLDRLPLNANGKLDRKALPAL 4225 (4334)
T ss_pred EecC-CCCcEEEEEEeCCcccccchHHHHHHHHHHHhhCChhhcCcceeecccCCCCCCCcccHhhcCCC
Confidence 6543 446788899887655321 1245789999999999999999999999999999999999999765
No 99
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=1.8e-62 Score=510.03 Aligned_cols=489 Identities=23% Similarity=0.286 Sum_probs=407.3
Q ss_pred CCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEec
Q 045072 14 LTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNN 93 (556)
Q Consensus 14 ~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 93 (556)
+++.+.|+++++.+|+++++...++++||.||.+.++++|.+|.+.|+++|++|+++++|+.+++++++||+++|+++++
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~~~~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~~~ 81 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDYLGEKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGHAYIP 81 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEeCCcEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEec
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccccccc
Q 045072 94 INTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESLVT 173 (556)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (556)
+++..+.+++.++++.+++++++++.+.... .. ....+...+ +.+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-------~~~~~~~~~---------------------~~~~~~ 129 (503)
T PRK04813 82 VDVSSPAERIEMIIEVAKPSLIIATEELPLE----IL-------GIPVITLDE---------------------LKDIFA 129 (503)
T ss_pred CCCCChHHHHHHHHHhcCCCEEEeccccccc----cc-------CCcEEehHH---------------------hhhhhh
Confidence 9999999999999999999999998764100 00 011111110 000000
Q ss_pred cCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchhhhHhHhc
Q 045072 174 KGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAV 253 (556)
Q Consensus 174 ~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~ 253 (556)
. ........+..++++++++|||||||.||+|.++|+++..........+.+...++++...|++|..++...+.++..
T Consensus 130 ~-~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~ 208 (503)
T PRK04813 130 T-GNPYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSVMDLYPTLAS 208 (503)
T ss_pred c-cccccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhHHHHHHHHhc
Confidence 0 001111123456789999999999999999999999998887777777888999999999999999988888889999
Q ss_pred CcEeEEecC---CCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHHHHhH-hc-CCe
Q 045072 254 GGTNVCLRK---FDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVLFRTE-SL-GFL 326 (556)
Q Consensus 254 g~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~~~~~-~~-~~~ 326 (556)
|+++++.+. .++..+++.+++++++++.++|++++.+..... ...+++++.++++|+++++.+.+++. .+ ++.
T Consensus 209 g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~ 288 (503)
T PRK04813 209 GGTLVALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNLTHFLFCGEELPHKTAKKLLERFPSAT 288 (503)
T ss_pred CCEEEEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCcccCCCceEEEEecCcCCHHHHHHHHHHCCCce
Confidence 999988874 588999999999999999999999988754432 45678999999999999999999887 45 789
Q ss_pred EEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccc
Q 045072 327 VSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGY 406 (556)
Q Consensus 327 l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy 406 (556)
+++.||+||++..+.......+ ........++|.+.++. +++|+|+ ++.+++.+ +.|||+++|+.++.||
T Consensus 289 ~~~~yG~tE~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gy 358 (503)
T PRK04813 289 IYNTYGPTEATVAVTSIEITDE------MLDQYKRLPIGYAKPDS-PLLIIDE-EGTKLPDG--EQGEIVISGPSVSKGY 358 (503)
T ss_pred EEeCcccchheeEEEEEEeccc------ccccCCCCcccccCCCC-EEEEECC-CCCCCCCC--CceEEEEecccccccc
Confidence 9999999999765543322111 01112234789999999 9999997 78888877 6899999999999999
Q ss_pred cCCCCccccCcC---CCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCC
Q 045072 407 LKDPNGTRKCMK---DDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWG 483 (556)
Q Consensus 407 ~~~~~~~~~~~~---~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g 483 (556)
+++++.+...|. +.+||+|||+|++ ++|++++.||.+|+|+.+|+++++.+||+.+.++|+|.+++|++.+++..+
T Consensus 359 ~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~ 437 (503)
T PRK04813 359 LNNPEKTAEAFFTFDGQPAYHTGDAGYL-EDGLLFYQGRIDFQIKLNGYRIELEEIEQNLRQSSYVESAVVVPYNKDHKV 437 (503)
T ss_pred CCChhHhHHhhccCCCceeEECCceEEe-eCCeEEEeccccceEEECcEEeCHHHHHHHHHhCCCcceEEEEEeeCCCCc
Confidence 999988877663 2359999999999 899999999999999999999999999999999999999999998777667
Q ss_pred eeeEEEEEeccccc--CCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHH
Q 045072 484 ETPCAFLSLKAELE--KKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAK 546 (556)
Q Consensus 484 ~~~~~~v~~~~~~~--~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~ 546 (556)
+.++++++..++.. .....+++.++++++++++++|..++++++||+|++||++|++|++++.
T Consensus 438 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~ 502 (503)
T PRK04813 438 QYLIAYVVPKEEDFEREFELTKAIKKELKERLMEYMIPRKFIYRDSLPLTPNGKIDRKALIEEVN 502 (503)
T ss_pred cEEEEEEEeccccccccchhHHHHHHHHHhhCccccCCeEEEEeccCCCCCCCCCcHHHHHHHhc
Confidence 78888888766422 1123467899999999999999999999999999999999999998875
No 100
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.2e-62 Score=509.95 Aligned_cols=502 Identities=25% Similarity=0.319 Sum_probs=404.7
Q ss_pred CCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEec
Q 045072 14 LTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNN 93 (556)
Q Consensus 14 ~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 93 (556)
.|+.++|.++++++|+++|+.+.++.+||.||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|+++++
T Consensus 3 ~~l~~~~~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~v~ 82 (533)
T PRK07798 3 WNIADLFEAVADAVPDRVALVCGDRRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARAVPVN 82 (533)
T ss_pred ccHHHHHHHHHHhCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCeEEEe
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccccccc
Q 045072 94 INTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESLVT 173 (556)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (556)
+++.++.+++.++++++++++++++.+....+.+.....+ ....++.+++..... ...+..++++++.
T Consensus 83 l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~ 150 (533)
T PRK07798 83 VNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLP---KLRTLVVVEDGSGND---------LLPGAVDYEDALA 150 (533)
T ss_pred cCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCC---CccEEEEecCCcccc---------cCCccccHHHHHh
Confidence 9999999999999999999999999877666655533322 123344444322110 0011234555544
Q ss_pred cCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhh---------cCC------CCCCEEEEecCh
Q 045072 174 KGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLID---------WSI------PKQPVYLWTLPM 238 (556)
Q Consensus 174 ~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~---------~~~------~~~~~~~~~~pl 238 (556)
........ ....++.++++|||||||.||+|+++|+++.......... ..+ ..+++++..+|+
T Consensus 151 ~~~~~~~~--~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl 228 (533)
T PRK07798 151 AGSPERDF--GERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPL 228 (533)
T ss_pred ccCCcCCC--CCCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecch
Confidence 33222111 1123355799999999999999999999987544332111 111 567889999999
Q ss_pred hhhhhchhhhHhHhcCcEeEEec--CCCHHHHHHHHHHhCCcEEechhHHHH-HHHcCC---CCCCCCCCeEEEEeCCCC
Q 045072 239 FHANGWSYPWGMAAVGGTNVCLR--KFDAAVIYKMIRQHGVTHMCGAPVVLN-MISNLP---RSEPLRNPVHILTAGAPP 312 (556)
Q Consensus 239 ~~~~g~~~~~~~~~~g~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~p~~~~-~l~~~~---~~~~l~~l~~v~~~g~~~ 312 (556)
+|..++..++.++..|+++++.+ .+++..+++.++++++|.+.++|..+. .+.... ....+++++.+++||+++
T Consensus 229 ~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~gG~~~ 308 (533)
T PRK07798 229 MHGAGQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIASGGALF 308 (533)
T ss_pred hhhhhHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEECCCCC
Confidence 99999988899999999999998 789999999999999999999986543 232221 234677999999999999
Q ss_pred cHHHHHHhHh-c-CCeEEecccccccccceeeccccccccCCChhhhccccccCc--cccceeeeeEEecCCCCceecCC
Q 045072 313 PAAVLFRTES-L-GFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQG--VRTVCFTEIDVIDSESGLSVSHD 388 (556)
Q Consensus 313 ~~~~~~~~~~-~-~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G--~~~~~~~~~~i~d~~~~~~~~~~ 388 (556)
++++..++.+ + +..+++.||+||++.+....... .....| .+.++. .++|+|+ ++.+++.+
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~-------------~~~~~g~~~~~~~~-~~~i~~~-~~~~~~~g 373 (533)
T PRK07798 309 SPSVKEALLELLPNVVLTDSIGSSETGFGGSGTVAK-------------GAVHTGGPRFTIGP-RTVVLDE-DGNPVEPG 373 (533)
T ss_pred CHHHHHHHHHHcCCCeEEeeecccccccccccCCCC-------------CCccCCCCccCCCc-eEEEECC-CCCCCCCC
Confidence 9999998884 4 78999999999996554432110 001223 566666 8999997 67788877
Q ss_pred CCeeeEEEEecCCccccccCCCCccccCcC---CCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhc
Q 045072 389 GASLGEIVFRGGSMMLGYLKDPNGTRKCMK---DDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYT 465 (556)
Q Consensus 389 ~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~---~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~ 465 (556)
....|+++ .++.++.||++++..+...|. +++||+|||++++++||++++.||.+|+++.+|++|++.+||+.+.+
T Consensus 374 ~~~~g~l~-~~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~ 452 (533)
T PRK07798 374 SGEIGWIA-RRGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPEEVEEALKA 452 (533)
T ss_pred CCCeeEEE-eecCccccccCChhhhHHhhccCCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHHHHHHHHHh
Confidence 42226665 556899999999998877764 24699999999999999999999999999999999999999999999
Q ss_pred CCCccccEEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHH
Q 045072 466 NPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMA 545 (556)
Q Consensus 466 ~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~ 545 (556)
+|.|.+++|++.+++..|+.+++++++.++.. .+.+++.++++++++.|++|..++++++||+|++||++|+.|+++.
T Consensus 453 ~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~~~~~~~~~ 530 (533)
T PRK07798 453 HPDVADALVVGVPDERWGQEVVAVVQLREGAR--PDLAELRAHCRSSLAGYKVPRAIWFVDEVQRSPAGKADYRWAKEQA 530 (533)
T ss_pred CccceeEEEEeccCcccCceEEEEEEECCCCC--CCHHHHHHHHhhhcccCCCCeEEEEcccCCCCCcchhhHHHHhhhh
Confidence 99999999999998888888888888776543 5789999999999999999999999999999999999999999987
Q ss_pred HH
Q 045072 546 KA 547 (556)
Q Consensus 546 ~~ 547 (556)
.+
T Consensus 531 ~~ 532 (533)
T PRK07798 531 AE 532 (533)
T ss_pred cc
Confidence 64
No 101
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.8e-63 Score=526.03 Aligned_cols=507 Identities=18% Similarity=0.175 Sum_probs=385.1
Q ss_pred cCCCCCCCCCHHHHHHHHHHhcCCCCEEEECC------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHH
Q 045072 6 PCTANSSPLTPLGFLERAATVYGDCPSIIYNN------LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYE 79 (556)
Q Consensus 6 ~~~~~~~~~t~~~~l~~~~~~~p~~~a~~~~~------~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~ 79 (556)
+.++...+.++.+.|+++++.+|+++|+++.+ +++||+||.++++++|.+|.+.|+++||+|+++++|++++++
T Consensus 41 ~~~~~~~~~~l~~~l~~~a~~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~ 120 (624)
T PRK12582 41 RHPLGPYPRSIPHLLAKWAAEAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHAL 120 (624)
T ss_pred CCCCCCcccCHHHHHHHHHHHCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHH
Confidence 34455567899999999999999999998753 589999999999999999999999999999999999999999
Q ss_pred HHHHhhhccceEeccCCCCCH-----HHHHHHHhccCCeEEEEeccc-hhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCC
Q 045072 80 AHFAIPFTGAILNNINTRLDA-----RTISVLLQHSESKLVLVDYQS-RNLVVEAISLFPSDIKCPPLVLIADHTDHDND 153 (556)
Q Consensus 80 ~~lA~~~~G~~~v~l~~~~~~-----~~l~~~l~~~~~~~vi~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (556)
++|||+++|++++|++|.++. +++.+++++++++++|+++.. ........... ...++.+......
T Consensus 121 ~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~--- 192 (624)
T PRK12582 121 MTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDLL-----DVTVVHVTGPGEG--- 192 (624)
T ss_pred HHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhhc-----CceEEEEcCCCcc---
Confidence 999999999999999999885 899999999999999997642 11111111110 1123333221100
Q ss_pred CCCccccCCCcccccccccccCCCC-CC-CCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCC---
Q 045072 154 NKSSQTVDSNFCCTYESLVTKGDPN-FK-WIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPK--- 228 (556)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~--- 228 (556)
.....+.++....... .. ......++++++++|||||||.||||+++|+++..+............
T Consensus 193 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~ 263 (624)
T PRK12582 193 ---------IASIAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPP 263 (624)
T ss_pred ---------cccccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCC
Confidence 0112233333222111 00 011245689999999999999999999999999876655444333333
Q ss_pred CCEEEEecChhhhhhchh-hhHhHhcCcEeEEecC-CCH---HHHHHHHHHhCCcEEechhHHHHHHHcCCC------CC
Q 045072 229 QPVYLWTLPMFHANGWSY-PWGMAAVGGTNVCLRK-FDA---AVIYKMIRQHGVTHMCGAPVVLNMISNLPR------SE 297 (556)
Q Consensus 229 ~~~~~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~~-~~~---~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~------~~ 297 (556)
.++++..+|++|.+|+.. ++.++..|+++++.+. +++ ..+++.++++++|+++++|.++..|.+... ..
T Consensus 264 ~~~~l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~ 343 (624)
T PRK12582 264 PPVSLDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRS 343 (624)
T ss_pred CceEEEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHH
Confidence 578999999999999765 4566778888877652 333 456777889999999999999988865432 12
Q ss_pred CCCCCeEEEEeCCCCcHHHHHHhHhc-------CCeEEecccccccccceeeccccccccCCChhhhccccccCccccce
Q 045072 298 PLRNPVHILTAGAPPPAAVLFRTESL-------GFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVC 370 (556)
Q Consensus 298 ~l~~l~~v~~~g~~~~~~~~~~~~~~-------~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 370 (556)
.++++|.+++||+++++++.+++.+. ++.+++.||+||++.++...... ....+++|.|.++
T Consensus 344 ~~~slr~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~-----------~~~~~svG~p~pg 412 (624)
T PRK12582 344 FFKNLRLMAYGGATLSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGTHWD-----------TERVGLIGLPLPG 412 (624)
T ss_pred HhhheeEEEecCCCCCHHHHHHHHHHHHhhcCCCceEEeccccccccceeecccCC-----------CCCCCCCCcCCCC
Confidence 46789999999999999999988753 36899999999998765432110 1234689999999
Q ss_pred eeeeEEecCCCCceecCCCCeeeEEEEecCCccccccCCCCccccCcCCCCceecCceEEE-e---cCCcEEEEccCCCe
Q 045072 371 FTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVI-H---ADGYLEIKDRSKDV 446 (556)
Q Consensus 371 ~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~-~---~dg~l~~~GR~~d~ 446 (556)
+ +++|++. | +.|||+++|++++.|||++|+.+...|..+|||+|||+|++ | +||++++.||.+|+
T Consensus 413 ~-~v~i~~~--------G--~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~ 481 (624)
T PRK12582 413 V-ELKLAPV--------G--DKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAED 481 (624)
T ss_pred c-EEEEccC--------C--CceEEEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhh
Confidence 9 9998753 2 57999999999999999999999988977999999999998 4 46999999999999
Q ss_pred Ee-eCcEeeChHHHH--HHHhcCCCccccEEEeecCCCCCeeeEEEEEecccc----c-C-------CCCHHHHHHHHHh
Q 045072 447 II-SGGENLSSVEVE--SVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAEL----E-K-------KPTEKEIIEYCRA 511 (556)
Q Consensus 447 i~-~~G~~v~~~~ie--~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~----~-~-------~~~~~~i~~~l~~ 511 (556)
|+ .+|++|+|.+|| .++.+||.|.+++|++.+++..| ++|++.... . . ....+++.+++++
T Consensus 482 i~~~~G~~i~p~~iE~e~~l~~~p~V~~a~VvG~~~~~~g----~lv~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 557 (624)
T PRK12582 482 FKLSTGTWVSVGTLRPDAVAACSPVIHDAVVAGQDRAFIG----LLAWPNPAACRQLAGDPDAAPEDVVKHPAVLAILRE 557 (624)
T ss_pred EecCCCcEechHHHHHHHHHhcCcchheEEEEcCCCCcEE----EEEecCHHHHHHHHhcCCCCHHHHhcCHHHHHHHHH
Confidence 99 689999998885 68889999999999999877644 444433211 0 0 0123445555544
Q ss_pred c-------CCCCc-ccceeEEecCCC------CCCCCCccHHHHHHHHHHhccccccC
Q 045072 512 R-------LPRYM-VPKTVVFKEELP------KTSTGKIKKFELREMAKAMGKSKVSR 555 (556)
Q Consensus 512 ~-------l~~~~-~p~~~~~v~~lP------~t~~GKv~r~~l~~~~~~~~~~~~~~ 555 (556)
+ ++.+. .|..+.+++++| +|++||++|+.+.+.|.+.++.-|..
T Consensus 558 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~~R~~~~~~y~~~i~~ly~~ 615 (624)
T PRK12582 558 GLSAHNAEAGGSSSRIARALLMTEPPSIDAGEITDKGYINQRAVLERRAALVERLYAE 615 (624)
T ss_pred HHHHHHhhcCCChhheEEEEEeCCCCCccCCcCCccccccHHHHHHHHHHHHHHHhcC
Confidence 3 45555 999999999876 56788999999999999999887653
No 102
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5e-62 Score=506.50 Aligned_cols=494 Identities=26% Similarity=0.370 Sum_probs=402.6
Q ss_pred HHHHHHhcCCCCEEEE--CCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCC
Q 045072 20 LERAATVYGDCPSIIY--NNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTR 97 (556)
Q Consensus 20 l~~~~~~~p~~~a~~~--~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~ 97 (556)
....++++|+++|+++ .++.+||.||.++++++|.+|.+.|+++|++|+++++|+++++++++||+++|++++++++.
T Consensus 3 ~~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~~~ 82 (511)
T PRK13391 3 PGIHAQTTPDKPAVIMASTGEVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVNSH 82 (511)
T ss_pred hhhhHhhCCCceEEEecCCCCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEeccccc
Confidence 3567889999999987 46789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccccccccCCC
Q 045072 98 LDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESLVTKGDP 177 (556)
Q Consensus 98 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (556)
++.+++.++++.++++.++++........+....... ....+........ .....+.+......
T Consensus 83 ~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~------------~~~~~~~~~~~~~~- 146 (511)
T PRK13391 83 LTPAEAAYIVDDSGARALITSAAKLDVARALLKQCPG---VRHRLVLDGDGEL------------EGFVGYAEAVAGLP- 146 (511)
T ss_pred cCHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCCC---ceEEEEecCCCCC------------cccccHHHHhcCCC-
Confidence 9999999999999999999998776665554433321 1122222211100 00111222221111
Q ss_pred CCCCCCCCCCCCcEEEEeccCCCCCCceEEEc--hHHHHHH---HhhhhhhcCCCCCCEEEEecChhhhhhchhhhHhHh
Q 045072 178 NFKWIRPQNEWDPMILNYTSGTTSSPKGVVHC--HRGIFVM---TVDSLIDWSIPKQPVYLWTLPMFHANGWSYPWGMAA 252 (556)
Q Consensus 178 ~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t--~~~~~~~---~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~ 252 (556)
.....+.++.++++|||||||.||+|.++ |.+.... .......+.+...++++..+|++|..++...+.++.
T Consensus 147 ---~~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~ 223 (511)
T PRK13391 147 ---ATPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQRAVMLVIR 223 (511)
T ss_pred ---CCCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHHHHHHHHH
Confidence 01112344678999999999999999964 5544221 222334456788899999999999999888888899
Q ss_pred cCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC----CCCCCCCeEEEEeCCCCcHHHHHHhH-hcCCeE
Q 045072 253 VGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR----SEPLRNPVHILTAGAPPPAAVLFRTE-SLGFLV 327 (556)
Q Consensus 253 ~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----~~~l~~l~~v~~~g~~~~~~~~~~~~-~~~~~l 327 (556)
.|+++++.+.+++..+++.++++++|++.++|+++..+.+... ...+++++.+++||+++++++.+++. .++..+
T Consensus 224 ~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~g~~v 303 (511)
T PRK13391 224 LGGTVIVMEHFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWWGPII 303 (511)
T ss_pred cCceEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHHcCCce
Confidence 9999999888999999999999999999999999998876543 23477999999999999999999888 468899
Q ss_pred EecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCcccccc
Q 045072 328 SHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYL 407 (556)
Q Consensus 328 ~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~ 407 (556)
++.||+||++.++.... .......+++|.+.++ .++|+|+ ++.+++.| +.|||+++|+ ++.||+
T Consensus 304 ~~~YG~tE~~~~~~~~~----------~~~~~~~~~vG~~~~g--~~~i~d~-~~~~~~~g--~~Gel~~~g~-~~~gy~ 367 (511)
T PRK13391 304 HEYYAATEGLGFTACDS----------EEWLAHPGTVGRAMFG--DLHILDD-DGAELPPG--EPGTIWFEGG-RPFEYL 367 (511)
T ss_pred eeeeccccccceEEecC----------ccccccCCCcCCcccc--eEEEECC-CCCCCCCC--CceEEEEecC-cceEEc
Confidence 99999999987654321 1111223578998887 4788996 78888777 6799999999 889999
Q ss_pred CCCCccccCcCCC-CceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeee
Q 045072 408 KDPNGTRKCMKDD-GWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETP 486 (556)
Q Consensus 408 ~~~~~~~~~~~~~-~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~ 486 (556)
++++.+...+..+ +||+|||+|+++++|.+++.||.+|+++.+|.++++.+||+++.++|.|.+++|++.+++..|+.+
T Consensus 368 ~~~~~~~~~~~~~~~w~~TGD~g~~~~~g~l~~~gR~~~~i~~~G~~v~~~eie~~l~~~~~v~~~~v~~~~~~~~g~~~ 447 (511)
T PRK13391 368 NDPAKTAEARHPDGTWSTVGDIGYVDEDGYLYLTDRAAFMIISGGVNIYPQEAENLLITHPKVADAAVFGVPNEDLGEEV 447 (511)
T ss_pred CChhHhHHhhccCCCEEecCCEEEECCCccEEEeccCCCEEEeCCEEECHHHHHHHHHhCCCcceEEEEecCCcccCcee
Confidence 9999888777644 999999999999999999999999999999999999999999999999999999999988888888
Q ss_pred EEEEEecccccC-CCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHh
Q 045072 487 CAFLSLKAELEK-KPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAM 548 (556)
Q Consensus 487 ~~~v~~~~~~~~-~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 548 (556)
+++++..++... ....+++.+++++++++++.|..+.+++++|+|++||++|+.|++.|...
T Consensus 448 ~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~~~ 510 (511)
T PRK13391 448 KAVVQPVDGVDPGPALAAELIAFCRQRLSRQKCPRSIDFEDELPRLPTGKLYKRLLRDRYWGN 510 (511)
T ss_pred EEEEEECCCCCcccchHHHHHHHHHhhcccCcCCcEEEEeecCCCCCccceeHHHHHHHhhcc
Confidence 888887664431 23468899999999999999999999999999999999999999988653
No 103
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.1e-61 Score=504.01 Aligned_cols=494 Identities=25% Similarity=0.356 Sum_probs=399.6
Q ss_pred CEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhcc
Q 045072 31 PSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHS 110 (556)
Q Consensus 31 ~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~ 110 (556)
.|+...++.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|+++++++|.++.+++.++++.+
T Consensus 3 ~~~~~~~~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~ 82 (509)
T PRK12406 3 ATIISGDRRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDS 82 (509)
T ss_pred eEEEECCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhcc
Confidence 46777889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCC-CC-CCCCccccCCCcccccccccccCCCCCCCCCCCCCC
Q 045072 111 ESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDH-DN-DNKSSQTVDSNFCCTYESLVTKGDPNFKWIRPQNEW 188 (556)
Q Consensus 111 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (556)
++++++++....+.+.+..... ..++........ .. ...............+++.+..... ......+
T Consensus 83 ~~~~i~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 152 (509)
T PRK12406 83 GARVLIAHADLLHGLASALPAG------VTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQEP----YDGPPVP 152 (509)
T ss_pred CCcEEEEccchhhhhhhhhhcc------cceeecccccccccccccccccccCCCCccCHHHHhcccCc----cCCCCCC
Confidence 9999999887665544332110 111111110000 00 0000000001122334443322111 1123567
Q ss_pred CcEEEEeccCCCCCCceEEEchHHH---HHHHhhhhhhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecCCCH
Q 045072 189 DPMILNYTSGTTSSPKGVVHCHRGI---FVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRKFDA 265 (556)
Q Consensus 189 ~~a~i~~TsGTTG~pK~v~~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~~~~ 265 (556)
++++++|||||||.||+|.++|... ..........+++..+++++...|++|..+....+.++..|+++++.+..++
T Consensus 153 ~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 232 (509)
T PRK12406 153 QPQSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQPRFDP 232 (509)
T ss_pred CceEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEccCCCH
Confidence 9999999999999999999876543 3333334456678899999999999999887777777888999988888899
Q ss_pred HHHHHHHHHhCCcEEechhHHHHHHHcCCC----CCCCCCCeEEEEeCCCCcHHHHHHhHh-cCCeEEecccccccccce
Q 045072 266 AVIYKMIRQHGVTHMCGAPVVLNMISNLPR----SEPLRNPVHILTAGAPPPAAVLFRTES-LGFLVSHGYGLTETAGLV 340 (556)
Q Consensus 266 ~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----~~~l~~l~~v~~~g~~~~~~~~~~~~~-~~~~l~~~yG~tE~~~~~ 340 (556)
..+++.++++++|.+.++|+++..+..... ...+++++.+++||+++++++.+++.+ +++.+++.||+||++.++
T Consensus 233 ~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~ 312 (509)
T PRK12406 233 EELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWWGPVIYEYYGSTESGAVT 312 (509)
T ss_pred HHHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHcCCcEEeeccccccCceE
Confidence 999999999999999999999999986543 345689999999999999999999884 588999999999998765
Q ss_pred eeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccc-cccCCCCccccCcCC
Q 045072 341 VSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMML-GYLKDPNGTRKCMKD 419 (556)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~-gy~~~~~~~~~~~~~ 419 (556)
+.+.. ......+++|.+.++. .++|+|+ ++.+++.+ +.|||+++|+.++. +|+++++.+...+.
T Consensus 313 ~~~~~----------~~~~~~~~~G~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~~~y~~~~~~~~~~~~- 377 (509)
T PRK12406 313 FATSE----------DALSHPGTVGKAAPGA-ELRFVDE-DGRPLPQG--EIGEIYSRIAGNPDFTYHNKPEKRAEIDR- 377 (509)
T ss_pred ecCcc----------cccccCCCcCccCCCc-EEEEECC-CCCCCCCC--CceEEEEECCccccccccCCchhcccccC-
Confidence 54321 1112235789999998 9999997 68888887 68999999998875 89999988776665
Q ss_pred CCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEecccccCC
Q 045072 420 DGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKK 499 (556)
Q Consensus 420 ~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~ 499 (556)
++||+|||++++++||.+++.||.+|+++.+|.+|++.+||..|.++++|.+++|++.+++..++.++++++..+...
T Consensus 378 ~~~~~TGD~~~~~~~g~~~~~GR~~d~ik~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~-- 455 (509)
T PRK12406 378 GGFITSGDVGYLDADGYLFLCDRKRDMVISGGVNIYPAEIEAVLHAVPGVHDCAVFGIPDAEFGEALMAVVEPQPGAT-- 455 (509)
T ss_pred CCCeEEccEEEEcCCceEEEeecccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeeeccccCceeEEEEEECCCCC--
Confidence 899999999999999999999999999999999999999999999999999999999998877888889888776543
Q ss_pred CCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHhccc
Q 045072 500 PTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMGKS 551 (556)
Q Consensus 500 ~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~~~~ 551 (556)
...+++.+.++++++++++|..++++++||+|++||++|++|++.+.+...+
T Consensus 456 ~~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~r~~L~~~~~~~~~~ 507 (509)
T PRK12406 456 LDEADIRAQLKARLAGYKVPKHIEIMAELPREDSGKIFKRRLRDPYWANAGR 507 (509)
T ss_pred CCHHHHHHHHHHhcccCCCCcEEEEeccCCCCCccchhHHHHHHHHHhhccc
Confidence 5789999999999999999999999999999999999999999988765543
No 104
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.1e-62 Score=607.02 Aligned_cols=488 Identities=21% Similarity=0.235 Sum_probs=415.1
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhcc
Q 045072 9 ANSSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTG 88 (556)
Q Consensus 9 ~~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (556)
....+.++.++|.++++.+|+++|+++.++++||+||.++++++|++|+++|+++|++|++++++++++++++|||+++|
T Consensus 1126 ~~~~~~~l~~~~~~~a~~~p~~~Al~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~lailkaG 1205 (4334)
T PRK05691 1126 CAPAQAWLPELLNEQARQTPERIALVWDGGSLDYAELHAQANRLAHYLRDKGVGPDVCVAIAAERSPQLLVGLLAILKAG 1205 (4334)
T ss_pred CCCccCCHHHHHHHHHHhCCCCeEEEECCceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhC
Confidence 34456789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCccccc
Q 045072 89 AILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTY 168 (556)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (556)
++++|++|.++.+++.+++++++++++|++......+... . ....+...... .
T Consensus 1206 ~~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~----~----~~~~~~~~~~~-------------------~ 1258 (4334)
T PRK05691 1206 GAYVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQA----E----GVSAIALDSLH-------------------L 1258 (4334)
T ss_pred CEEEecCcCChHHHHHHHHHhcCCCEEEecchhhhhcccc----c----CceEEeecccc-------------------c
Confidence 9999999999999999999999999999987654322110 0 00111111000 0
Q ss_pred ccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchhhh
Q 045072 169 ESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSYPW 248 (556)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~ 248 (556)
.. .....+.....++++++++|||||||.||||.++|+++..........+++.++++++...|++|..++..++
T Consensus 1259 ~~-----~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~s~~~~~ 1333 (4334)
T PRK05691 1259 DS-----WPSQAPGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATYALDDSDVLMQKAPISFDVSVWECF 1333 (4334)
T ss_pred cc-----cCCCCCCCCCCCCCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhcCCCCCCEEEEeCCccHHHHHHHHH
Confidence 00 0000011124567999999999999999999999999998888877788899999999999999998888899
Q ss_pred HhHhcCcEeEEecC---CCHHHHHHHHHHhCCcEEechhHHHHHHHcCCCCCCCCCCeEEEEeCCCCcHHHHHHhHh-c-
Q 045072 249 GMAAVGGTNVCLRK---FDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPRSEPLRNPVHILTAGAPPPAAVLFRTES-L- 323 (556)
Q Consensus 249 ~~~~~g~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~l~~v~~~g~~~~~~~~~~~~~-~- 323 (556)
.++..|+++++.++ .++..+++.++++++|+++++|++++.+........++++|.+++|||++++++.+++.+ +
T Consensus 1334 ~~L~~G~~l~i~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~ 1413 (4334)
T PRK05691 1334 WPLITGCRLVLAGPGEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPLAAACTSLRRLFSGGEALPAELRNRVLQRLP 1413 (4334)
T ss_pred HHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCcccccCCcccEEEEeecCCCHHHHHHHHHhCC
Confidence 99999999998863 689999999999999999999999999987655567889999999999999999998874 3
Q ss_pred CCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCcc
Q 045072 324 GFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMM 403 (556)
Q Consensus 324 ~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~ 403 (556)
++.++|.||+||++..++...... ......++|.|+++. .++|+|+ ++.+++.| ..|||+|+|++++
T Consensus 1414 ~~~l~n~YG~TE~~~~~~~~~~~~---------~~~~~~~iG~p~~~~-~~~i~d~-~~~~vp~G--~~GEL~i~G~~v~ 1480 (4334)
T PRK05691 1414 QVQLHNRYGPTETAINVTHWQCQA---------EDGERSPIGRPLGNV-LCRVLDA-ELNLLPPG--VAGELCIGGAGLA 1480 (4334)
T ss_pred CcEEEeCCCcChheeeeeeeeccc---------ccCCCCcccceeCCC-EEEEECC-CCCCCCCC--CceEEEecCcccc
Confidence 689999999999976554322110 111235799999999 9999997 68889888 7899999999999
Q ss_pred ccccCCCCccccCcCC-------CCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEe
Q 045072 404 LGYLKDPNGTRKCMKD-------DGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVA 476 (556)
Q Consensus 404 ~gy~~~~~~~~~~~~~-------~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~ 476 (556)
+||+++|+.+...|.. .+||+|||+|++++||.++++||.||+||++|++|++.+||..|.++|+|.+++|+.
T Consensus 1481 ~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~d~qiki~G~rie~~eIE~~l~~~~~V~~a~v~~ 1560 (4334)
T PRK05691 1481 RGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNADGALEYLGRLDQQVKLRGFRVEPEEIQARLLAQPGVAQAAVLV 1560 (4334)
T ss_pred hhhcCCccccHhhCCCCCCCCCCceEEEccceEEECCCCCEEEecccCcEEEECCEEcCHHHHHHHHHhCCCcceEEEEE
Confidence 9999999999888743 359999999999999999999999999999999999999999999999999999997
Q ss_pred ecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHH
Q 045072 477 RPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREM 544 (556)
Q Consensus 477 ~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~ 544 (556)
..+. .|..++++++...+.. ...+++.++++++++.|++|..++++++||+|++||++|++|++.
T Consensus 1561 ~~~~-~~~~lva~~~~~~~~~--~~~~~l~~~l~~~Lp~y~vP~~~~~~~~lP~t~~GKidr~~L~~~ 1625 (4334)
T PRK05691 1561 REGA-AGAQLVGYYTGEAGQE--AEAERLKAALAAELPEYMVPAQLIRLDQMPLGPSGKLDRRALPEP 1625 (4334)
T ss_pred eeCC-CCCEEEEEEEeCCCCC--CCHHHHHHHHHHhCccccCCcEEEEccccCCCCCCCcChhhcCcc
Confidence 6654 3577888888765543 567799999999999999999999999999999999999999754
No 105
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2.4e-62 Score=485.34 Aligned_cols=503 Identities=26% Similarity=0.398 Sum_probs=416.4
Q ss_pred HHHHHHHHhc-CCCCEEEECC------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 045072 18 GFLERAATVY-GDCPSIIYNN------LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAI 90 (556)
Q Consensus 18 ~~l~~~~~~~-p~~~a~~~~~------~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (556)
+++.+..+.. ++.+++++.+ ..+||.|+.+++.++|..|.+.|+++||+|++.+|+.++++++++||.++|++
T Consensus 68 n~~~~~~~~~~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai 147 (626)
T KOG1175|consen 68 NCLDRHIKEKGGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACARIGAI 147 (626)
T ss_pred hhhhhhhhhcCCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHhhcCeE
Confidence 3344443333 7888998863 34999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHHhccCCeEEEEeccc---------hhhHHHHHhcCCCCC-CCCCeEEEcCCCCCCCCCCCcccc
Q 045072 91 LNNINTRLDARTISVLLQHSESKLVLVDYQS---------RNLVVEAISLFPSDI-KCPPLVLIADHTDHDNDNKSSQTV 160 (556)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 160 (556)
.+++....++.++...+++++++++++.+.. .....++........ .....+.+.+..
T Consensus 148 ~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~------------ 215 (626)
T KOG1175|consen 148 HSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRN------------ 215 (626)
T ss_pred EEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEeccc------------
Confidence 9999999999999999999999999997643 223333333222110 011222222221
Q ss_pred CCCcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHH-HHhhhhhhcCCCCCCEEEEecChh
Q 045072 161 DSNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFV-MTVDSLIDWSIPKQPVYLWTLPMF 239 (556)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~pl~ 239 (556)
....++..+....+... ..+.+.+|+.+|+|||||||.||++.+++....- .+......+.++++|++.++....
T Consensus 216 ---~d~~~~~~~~~a~~~~~-~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~G 291 (626)
T KOG1175|consen 216 ---RDLFWSLELKKASPEHP-CVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLG 291 (626)
T ss_pred ---ccccHHHHhhhcCCCCC-ceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccC
Confidence 12445555555555544 3457788999999999999999999999987644 444455567899999999999999
Q ss_pred hhhhchh-hhHhHhcCcEeEEec--CCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC----CCCCCCCeEEEEeCCCC
Q 045072 240 HANGWSY-PWGMAAVGGTNVCLR--KFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR----SEPLRNPVHILTAGAPP 312 (556)
Q Consensus 240 ~~~g~~~-~~~~~~~g~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----~~~l~~l~~v~~~g~~~ 312 (556)
++.|..+ .+++++.|+++++.. ++++..+++.+.++++|++++.|+.++.+.+... ...+++||.+.++||++
T Consensus 292 Wi~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gepi 371 (626)
T KOG1175|consen 292 WITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEPI 371 (626)
T ss_pred eeeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeecCccC
Confidence 9998777 566889999988886 4699999999999999999999999997766655 33447899999999999
Q ss_pred cHHHHHHhH-hcCC-eEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCC
Q 045072 313 PAAVLFRTE-SLGF-LVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGA 390 (556)
Q Consensus 313 ~~~~~~~~~-~~~~-~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~ 390 (556)
.++...++. .++. +|++.||.||+|+.+..+..... ....++.+.|.+++ .+.|+|+ +|.+++.++
T Consensus 372 ~~~~~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~---------p~~pg~~~~p~~g~-~v~i~de-~g~~~~~~~- 439 (626)
T KOG1175|consen 372 NPEAWEWWKRVTGLDPIYETYGQTETGGICITPKPGKL---------PIKPGSAGKPFPGY-DVQILDE-NGNELPPST- 439 (626)
T ss_pred CcchHHHHHHhcCccchhhceeeeccCceeeeccCCCC---------CcCccccCCCCCCc-ceEEECC-CCCCcCCCC-
Confidence 999999988 5666 69999999999999877542211 34567899999999 9999999 899888876
Q ss_pred eeeEEEEecC---CccccccCCCCccccCcC--CCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhc
Q 045072 391 SLGEIVFRGG---SMMLGYLKDPNGTRKCMK--DDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYT 465 (556)
Q Consensus 391 ~~Gel~i~~~---~~~~gy~~~~~~~~~~~~--~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~ 465 (556)
+.|+|+++.+ +.+++||+|++....... ..|+|.|||.+++|+||++++.||.||.|+++|.++++.|||+++.+
T Consensus 440 ~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigtaEIE~al~~ 519 (626)
T KOG1175|consen 440 GNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTAEIESALVE 519 (626)
T ss_pred ceeEEEEeCCCCccccccccCCHHHhhhhhcccCCceEEecCceEEcCCceEEEEecccccccccceeecHHHHHHHHhh
Confidence 6799999985 678999999984444332 37999999999999999999999999999999999999999999999
Q ss_pred CCCccccEEEeecCCCCCeeeEEEEEecccccC-CCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHH
Q 045072 466 NPAVNEAAVVARPDEFWGETPCAFLSLKAELEK-KPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREM 544 (556)
Q Consensus 466 ~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~-~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~ 544 (556)
||.|.|++|++.+++..|+.++++|+++++... +...++|.+++++.+.++..|+.+.++++||+|.+||+.|+.||+.
T Consensus 520 hp~VaEsAvVg~p~~~~ge~v~aFvvl~~g~~~~~~L~kel~~~VR~~igp~a~P~~I~~v~~LPkTrSGKimRr~lrki 599 (626)
T KOG1175|consen 520 HPAVAESAVVGSPDPIKGEVVLAFVVLKSGSHDPEQLTKELVKHVRSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALRKI 599 (626)
T ss_pred CcchhheeeecCCCCCCCeEEEEEEEEcCCCCChHHHHHHHHHHHHhhcCcccccceeEecCCCCccccchhHHHHHHHH
Confidence 999999999999999999999999999998652 3456789999999999999999999999999999999999999999
Q ss_pred HHHh
Q 045072 545 AKAM 548 (556)
Q Consensus 545 ~~~~ 548 (556)
...+
T Consensus 600 ~~g~ 603 (626)
T KOG1175|consen 600 ASGK 603 (626)
T ss_pred hccC
Confidence 8876
No 106
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.5e-61 Score=502.39 Aligned_cols=486 Identities=27% Similarity=0.391 Sum_probs=398.7
Q ss_pred CEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhcc
Q 045072 31 PSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHS 110 (556)
Q Consensus 31 ~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~ 110 (556)
.++.+.++.+||.||.+.++++|.+|.+.|+++||+|+++++|+++++++++||+++|++++++++.++.+++.++++++
T Consensus 3 ~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~ 82 (502)
T PRK08276 3 VIMAPSGEVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDS 82 (502)
T ss_pred eEecCCCcEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcC
Confidence 45556779999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccccccccCCCCCCCCCCCCCCCc
Q 045072 111 ESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESLVTKGDPNFKWIRPQNEWDP 190 (556)
Q Consensus 111 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (556)
++++++++....+.+.+....... ....++...... .....+++....... ......++.
T Consensus 83 ~~~~ii~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~----~~~~~~~~~ 142 (502)
T PRK08276 83 GAKVLIVSAALADTAAELAAELPA--GVPLLLVVAGPV--------------PGFRSYEEALAAQPD----TPIADETAG 142 (502)
T ss_pred CCCEEEEccchhhHHHHHhhhccc--cccEEEEeCCCC--------------CccccHHHHHhcCCC----CCCCCCCcc
Confidence 999999998877666554433221 022232221110 011223333222111 112345678
Q ss_pred EEEEeccCCCCCCceEEEchHHHHHHH------hhhhhhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecCCC
Q 045072 191 MILNYTSGTTSSPKGVVHCHRGIFVMT------VDSLIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRKFD 264 (556)
Q Consensus 191 a~i~~TsGTTG~pK~v~~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~~~ 264 (556)
++++|||||||.||+|.+++.++.... ...........++++++..|++|..++...+.++..|+++++.+.++
T Consensus 143 a~i~~TSGtTG~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~ 222 (502)
T PRK08276 143 ADMLYSSGTTGRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVMEKFD 222 (502)
T ss_pred eEEEECCCCCCCCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcCCCC
Confidence 999999999999999999887654321 11111222356788999999999999888788889999998888899
Q ss_pred HHHHHHHHHHhCCcEEechhHHHHHHHcCCC----CCCCCCCeEEEEeCCCCcHHHHHHhH-hcCCeEEecccccccccc
Q 045072 265 AAVIYKMIRQHGVTHMCGAPVVLNMISNLPR----SEPLRNPVHILTAGAPPPAAVLFRTE-SLGFLVSHGYGLTETAGL 339 (556)
Q Consensus 265 ~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----~~~l~~l~~v~~~g~~~~~~~~~~~~-~~~~~l~~~yG~tE~~~~ 339 (556)
+..+++.++++++|+++++|+++..+.+... ..+++++|.++++|++++.++.+++. .++..+++.||+||++.+
T Consensus 223 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~ 302 (502)
T PRK08276 223 AEEALALIERYRVTHSQLVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWWGPIIHEYYASSEGGGV 302 (502)
T ss_pred HHHHHHHHHHhCCeEEEehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHhCcHhhhhcccccccce
Confidence 9999999999999999999999999987653 23478999999999999999999888 458889999999999886
Q ss_pred eeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccCCCCccccCcCC
Q 045072 340 VVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKD 419 (556)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~ 419 (556)
++..... .....+++|.|+ +. .++|+|+ ++.+++.+ +.|||+++|+.++.||+++++.+...+.+
T Consensus 303 ~~~~~~~----------~~~~~~~~G~~~-~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~ 367 (502)
T PRK08276 303 TVITSED----------WLAHPGSVGKAV-LG-EVRILDE-DGNELPPG--EIGTVYFEMDGYPFEYHNDPEKTAAARNP 367 (502)
T ss_pred eEecCcc----------ccccCCCcceec-cc-EEEEECC-CCCCCcCC--CceEEEEECCCccchhcCCHHHHHHHhcC
Confidence 6543211 112235789999 76 9999996 67888877 68999999999999999999999888887
Q ss_pred CCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEecccccC-
Q 045072 420 DGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEK- 498 (556)
Q Consensus 420 ~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~- 498 (556)
++||+|||+++++++|.+++.||.+|+++.+|.+|++.+||..+.++|+|.+++|++..++..|+.++++|+...+...
T Consensus 368 ~~~~~TGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~iE~~i~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~ 447 (502)
T PRK08276 368 HGWVTVGDVGYLDEDGYLYLTDRKSDMIISGGVNIYPQEIENLLVTHPKVADVAVFGVPDEEMGERVKAVVQPADGADAG 447 (502)
T ss_pred CCceeecceEEEcCCcCEEEeccCcceEEeCCEEeCHHHHHHHHHhCCCcceEEEEeCCCcccCceEEEEEEECCCCCCC
Confidence 7999999999999999999999999999999999999999999999999999999999998888999999998765431
Q ss_pred CCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHhccc
Q 045072 499 KPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMGKS 551 (556)
Q Consensus 499 ~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~~~~ 551 (556)
....+++.+.++++++++++|..++++++||+|++||++|++|++.|...-++
T Consensus 448 ~~~~~~i~~~~~~~l~~~~~p~~i~~~~~lP~t~~GKi~r~~L~~~~~~~~~~ 500 (502)
T PRK08276 448 DALAAELIAWLRGRLAHYKCPRSIDFEDELPRTPTGKLYKRRLRDRYWEGRQR 500 (502)
T ss_pred hhhHHHHHHHHHhhccCCCCCcEEEEecCCCCCcccchhHHHHHHHHHhhhhh
Confidence 12345899999999999999999999999999999999999999998765544
No 107
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=2e-61 Score=547.06 Aligned_cols=500 Identities=22% Similarity=0.252 Sum_probs=401.2
Q ss_pred CCCCCHHHHHHHHHHhcC-CCCEEEE-CCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhcc
Q 045072 11 SSPLTPLGFLERAATVYG-DCPSIIY-NNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTG 88 (556)
Q Consensus 11 ~~~~t~~~~l~~~~~~~p-~~~a~~~-~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (556)
..+.++.+.+.+.++++| ++.++.+ .++++||+||.++++++|++|++ |+++||+|+++++|+++++++++||+++|
T Consensus 628 ~~~~~~~~~l~~~~~~~~~~~~ai~~~~~~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~la~~~~G 706 (1140)
T PRK06814 628 DYDRTLFEALIEAAKIHGFKKLAVEDPVNGPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTFFALQSAG 706 (1140)
T ss_pred cccCCHHHHHHHHHHHcCCCCeEeECCCCCccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHHHHHHHCC
Confidence 345778888988888886 5677765 35899999999999999999976 99999999999999999999999999999
Q ss_pred ceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhH--HHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCccc
Q 045072 89 AILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLV--VEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCC 166 (556)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (556)
+++++++|..+.+++.++++++++++++++++..+.. ......... ...++..++.... .. ...
T Consensus 707 ~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~------~~-----~~~ 772 (1140)
T PRK06814 707 RVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEF---GIRIIYLEDVRAQ------IG-----LAD 772 (1140)
T ss_pred CEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhcc---CceEEEehHhhcc------CC-----hHH
Confidence 9999999999999999999999999999987654321 111111111 1233333321100 00 000
Q ss_pred ccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhc-h
Q 045072 167 TYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGW-S 245 (556)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~ 245 (556)
.+.+......+... ....+++|+++++|||||||.||+|.++|+++..+.......+++.++|++++.+|++|.+++ .
T Consensus 773 ~~~~~~~~~~~~~~-~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~ 851 (1140)
T PRK06814 773 KIKGLLAGRFPLVY-FCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGLTG 851 (1140)
T ss_pred HHHHHhhccCCccc-cCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHHHH
Confidence 11111111111111 112467899999999999999999999999998888877777889999999999999999998 4
Q ss_pred hhhHhHhcCcEeEEecC-CCHHHHHHHHHHhCCcEEechhHHHHHHHcCCCCCCCCCCeEEEEeCCCCcHHHHHHhH-hc
Q 045072 246 YPWGMAAVGGTNVCLRK-FDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPRSEPLRNPVHILTAGAPPPAAVLFRTE-SL 323 (556)
Q Consensus 246 ~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~l~~v~~~g~~~~~~~~~~~~-~~ 323 (556)
..+.++..|+++++.+. .+...+.+.++++++|+++.+|++++.+.+.....+++++|.+++||+++++++.+.+. .+
T Consensus 852 ~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~lr~v~~gg~~l~~~~~~~~~~~~ 931 (1140)
T PRK06814 852 GLVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYAHPYDFRSLRYVFAGAEKVKEETRQTWMEKF 931 (1140)
T ss_pred HHHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhcccccccceeEEEEcCCcCCHHHHHHHHHHh
Confidence 46778889999888764 56778899999999999999999999988765556678999999999999999999887 56
Q ss_pred CCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCcc
Q 045072 324 GFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMM 403 (556)
Q Consensus 324 ~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~ 403 (556)
++++++.||+||++..+...... ....+++|.|.+++ ++++.+. ++ .+ +.|||+++|++++
T Consensus 932 ~~~~~~~YG~TE~~~~~~~~~~~-----------~~~~~~vG~p~~g~-~~~~~~~-~~----~~--~~Gel~v~g~~~~ 992 (1140)
T PRK06814 932 GIRILEGYGVTETAPVIALNTPM-----------HNKAGTVGRLLPGI-EYRLEPV-PG----ID--EGGRLFVRGPNVM 992 (1140)
T ss_pred CCcEEeccccccccceEEecCCC-----------CCCCCcCCccCCCC-eEEEeec-CC----CC--CceEEEEeCCCcc
Confidence 89999999999998765443210 12245899999999 9998875 22 12 5699999999999
Q ss_pred ccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCC
Q 045072 404 LGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWG 483 (556)
Q Consensus 404 ~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g 483 (556)
.||+++++........+|||+|||+|++|+||++++.||.||+||.+|++|+|.+||+.+.+++.+.+++|++.+++..|
T Consensus 993 ~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~g 1072 (1140)
T PRK06814 993 LGYLRAENPGVLEPPADGWYDTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAAVEELAAELWPDALHAAVSIPDARKG 1072 (1140)
T ss_pred hhhcCCCCCCccccCCCCeEecCCEEEECCCCeEEEEecccCeeeeCCEEECHHHHHHHHHhcCCcccEEEEEcccCCCC
Confidence 99998775433222348999999999999999999999999999999999999999999999999999999999998888
Q ss_pred eeeEEEEEecccccCCCCHHHHHHHHHhc-CCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHhcc
Q 045072 484 ETPCAFLSLKAELEKKPTEKEIIEYCRAR-LPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMGK 550 (556)
Q Consensus 484 ~~~~~~v~~~~~~~~~~~~~~i~~~l~~~-l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~~~ 550 (556)
+.+++++. .. +.+.+++.++++++ ++++++|..+++++++|+|++||++|++|+++..+...
T Consensus 1073 ~~~~~~~~-~~----~~~~~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~~ 1135 (1140)
T PRK06814 1073 ERIILLTT-AS----DATRAAFLAHAKAAGASELMVPAEIITIDEIPLLGTGKIDYVAVTKLAEEAAA 1135 (1140)
T ss_pred ceEEEEEc-CC----CcCHHHHHHHHHHcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHHhhc
Confidence 87776653 21 15678899999865 99999999999999999999999999999999887644
No 108
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4e-61 Score=528.34 Aligned_cols=493 Identities=15% Similarity=0.164 Sum_probs=377.6
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccc
Q 045072 10 NSSPLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGA 89 (556)
Q Consensus 10 ~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (556)
.....++.++|+++++.+|+++|+++.++++||+||.++++++|++|++.|+++||+|+|+++|++++++++|||+++|+
T Consensus 443 ~~~~~sl~~ll~~~a~~~pd~~Al~~~~~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGa 522 (994)
T PRK07868 443 DHTRISLGRIIAEQARDAPKGEFLLFDGRVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGA 522 (994)
T ss_pred CCCCccHHHHHHHHHHHCCCCeEEEeCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCC
Confidence 36778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccc
Q 045072 90 ILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYE 169 (556)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (556)
+++|++|. .++.+++++++++++|++++..+.+... ...+++++....... ..+. ......++
T Consensus 523 v~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~---------~~~iiv~~~~~~~~~---~~~~--~~~~~~~~ 585 (994)
T PRK07868 523 VAVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQL---------PGRVLVLGGGESRDL---DLPD--DADVIDME 585 (994)
T ss_pred EEEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhc---------CceEEEecCCccccc---cCCc--chhhhhhh
Confidence 99999985 6899999999999999987665543221 133444432110000 0000 00001111
Q ss_pred cccccCCCCCC--CCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchhh
Q 045072 170 SLVTKGDPNFK--WIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSYP 247 (556)
Q Consensus 170 ~~~~~~~~~~~--~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~ 247 (556)
+.......... ...+..++++++|+|| ||||.||++.++|.+...........+.+..+|++++.+|++|.+++...
T Consensus 586 ~~~~~~~~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l~~~d~~L~~~Pl~h~~gl~~~ 664 (994)
T PRK07868 586 KIDPDAVELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAALDRRDTVYCLTPLHHESGLLVS 664 (994)
T ss_pred hcCcccccCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCCCCCCeEEEecChHHHhHHHHH
Confidence 11111000000 0112235799999998 57888888888887765544444455678899999999999999998876
Q ss_pred hHhHhcCcEeE-EecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCCCCeEEEEeCCCCcHHHHHHhH-hc
Q 045072 248 WGMAAVGGTNV-CLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLRNPVHILTAGAPPPAAVLFRTE-SL 323 (556)
Q Consensus 248 ~~~~~~g~~~~-~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~l~~v~~~g~~~~~~~~~~~~-~~ 323 (556)
+.+++.|++.+ +.+.+++..+++.|+++++|+++++|++++.+.+... ...++++|.++ |+.+++++.+++. .+
T Consensus 665 l~~~l~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~slr~~~--g~gl~~~l~~~~~~~~ 742 (994)
T PRK07868 665 LGGAVVGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNHPVRLFI--GSGMPTGLWERVVEAF 742 (994)
T ss_pred HHHHhccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCCceEEEe--cCCCCHHHHHHHHHHh
Confidence 66665555554 4456899999999999999999999999999987643 23456788765 3458999988887 45
Q ss_pred C-CeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEe--cC--------CCC--ceecCCCC
Q 045072 324 G-FLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVI--DS--------ESG--LSVSHDGA 390 (556)
Q Consensus 324 ~-~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~--d~--------~~~--~~~~~~~~ 390 (556)
+ +.+++.||+||++...... . ....+++|.|+++..+++|. |+ ++| ..++.|
T Consensus 743 ~~~~l~~~YG~TE~~~~~~~~---------~----~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~g-- 807 (994)
T PRK07868 743 APAHVVEFFATTDGQAVLANV---------S----GAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVN-- 807 (994)
T ss_pred Cchheeeeeeccccccccccc---------C----CCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCC--
Confidence 4 7899999999986543211 0 11246899999986344442 21 245 445555
Q ss_pred eeeEEEEecCCccccccCCCCcccc--CcC-CCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCC
Q 045072 391 SLGEIVFRGGSMMLGYLKDPNGTRK--CMK-DDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNP 467 (556)
Q Consensus 391 ~~Gel~i~~~~~~~gy~~~~~~~~~--~~~-~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~ 467 (556)
+.|||+++++..+ +|+.+.. .|. ++|||+|||+|++|+||+|+++||.||+||.+|.+|+|.|||+.|.+||
T Consensus 808 e~Gel~~~~~~~~-----~p~~t~~~~~~~~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~EIE~~L~~hp 882 (994)
T PRK07868 808 EVGVLLARARGPI-----DPTASVKRGVFAPADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYTEPVTDALGRIG 882 (994)
T ss_pred CceEEEEecCCCC-----ChhhhhHhcccccCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcHHHHHHHHhcCC
Confidence 6899999987532 3433211 232 4899999999999999999999999999999999999999999999999
Q ss_pred CccccEEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHH
Q 045072 468 AVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAK 546 (556)
Q Consensus 468 ~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~ 546 (556)
.|.+++|++.+++. ++.++++|+++++.. .+.++|.+++++ +++|++|..++++++||+|++||++|++|++.-.
T Consensus 883 ~V~~aaVvg~~d~~-~~~~~a~Vv~~~~~~--~~~~~L~~~l~~-l~~y~vP~~i~~v~~lP~T~sGKi~r~~L~~~~l 957 (994)
T PRK07868 883 GVDLAVTYGVEVGG-RQLAVAAVTLRPGAA--ITAADLTEALAS-LPVGLGPDIVHVVPEIPLSATYRPTVSALRAAGI 957 (994)
T ss_pred CeeEEEEEeecCCC-CceEEEEEEeCCCCc--CCHHHHHHHHHh-CCCCcCCeEEEEeCCCCCCccccEehHHHHhcCC
Confidence 99999999998875 678899998877644 678899999986 8999999999999999999999999999987643
No 109
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=7.6e-61 Score=494.64 Aligned_cols=454 Identities=17% Similarity=0.138 Sum_probs=344.0
Q ss_pred cCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccc------hhhHHHHHhcCCCCCCCCCeEEE
Q 045072 71 APNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQS------RNLVVEAISLFPSDIKCPPLVLI 144 (556)
Q Consensus 71 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 144 (556)
+||++++++++|||+++|++++|+++.++.+++.+++++++++++|+++.. .+.+....... ....+++
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~ 75 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAA-----PAKAIVL 75 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcc-----cceEEEE
Confidence 589999999999999999999999999999999999999999999997642 12222221111 1122222
Q ss_pred cCCCCCCCCCCCccccCCCcccccccccccCCC------CCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHh
Q 045072 145 ADHTDHDNDNKSSQTVDSNFCCTYESLVTKGDP------NFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTV 218 (556)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~ 218 (556)
...... . .... ......+++++..... ........+++++++|+|||||||.||||.++|++++.+..
T Consensus 76 ~~~~~~-~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~ 149 (499)
T PLN03051 76 PAAGEP-V---AVPL--REQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCAS 149 (499)
T ss_pred eccCcc-c---CCcc--ccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHH
Confidence 111100 0 0000 0011233443321110 00011112457999999999999999999999999877665
Q ss_pred hhhhhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecC-CCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--
Q 045072 219 DSLIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRK-FDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR-- 295 (556)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~-- 295 (556)
.....+++..+|++++.+|++|..++..++.++..|+++++.+. +++..+++.|+++++|+++++|+++..|.+...
T Consensus 150 ~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~ 229 (499)
T PLN03051 150 DGWAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFA 229 (499)
T ss_pred HHHHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccc
Confidence 55556678899999999999999998777888899999988874 788999999999999999999999999876532
Q ss_pred --CCCCCCCeEEEEeCCCCcHHHHHHhHh-c--CCeEEecccccccccceeeccccccccCCChhhhccccccCccccce
Q 045072 296 --SEPLRNPVHILTAGAPPPAAVLFRTES-L--GFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVC 370 (556)
Q Consensus 296 --~~~l~~l~~v~~~g~~~~~~~~~~~~~-~--~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 370 (556)
...++++|.+++||++++++..+++.+ + ++.+++.||+||++..+..... . .....+++|.|.++
T Consensus 230 ~~~~~~~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~--------~--~~~~~~~~G~p~~~ 299 (499)
T PLN03051 230 MEGLDWSKLRVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTL--------L--QPQAPGAFSTASLG 299 (499)
T ss_pred cccCCchhheEEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeecccc--------c--CCCCCccccCCCCC
Confidence 346789999999999999999887765 3 4789999999998654332110 0 01123578999999
Q ss_pred eeeeEEecCCCCceecCCCCeeeEEEEecCCc--cccccCCCCccccCcCC--------CCceecCceEEEecCCcEEEE
Q 045072 371 FTEIDVIDSESGLSVSHDGASLGEIVFRGGSM--MLGYLKDPNGTRKCMKD--------DGWFYTGDVGVIHADGYLEIK 440 (556)
Q Consensus 371 ~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~--~~gy~~~~~~~~~~~~~--------~~~~~TGD~~~~~~dg~l~~~ 440 (556)
+ +++|+|+ ++.+++.|+.+.|||+++||.+ +.||++++. +...+.+ .+||+|||+|++|+||++++.
T Consensus 300 ~-~~~ivd~-~g~~~~~g~~~~Gel~v~g~~~~~~~gy~~~~~-~~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~ 376 (499)
T PLN03051 300 T-RFVLLND-NGVPYPDDQPCVGEVALAPPMLGASDRLLNADH-DKVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQ 376 (499)
T ss_pred c-eEEEECC-CCCCCCCCCCcceEEEEecCcCCCCccccCCcc-cceeeecCCccccCCcceeecCCeEEECCCCcEEEE
Confidence 9 9999997 7888887743579999999976 579997653 3222211 127999999999999999999
Q ss_pred ccCCCeEeeCcEeeChHHHHHHHhc-CCCccccEEEeecCCCCC-eeeEEEE---EecccccCCCCHHHHHHHH----Hh
Q 045072 441 DRSKDVIISGGENLSSVEVESVLYT-NPAVNEAAVVARPDEFWG-ETPCAFL---SLKAELEKKPTEKEIIEYC----RA 511 (556)
Q Consensus 441 GR~~d~i~~~G~~v~~~~ie~~l~~-~~~i~~~~v~~~~~~~~g-~~~~~~v---~~~~~~~~~~~~~~i~~~l----~~ 511 (556)
||.+|+||.+|++|+|.|||++|.+ ||+|.+++|++.+++.+| +.++++| +++++.. ..+.+++.++| ++
T Consensus 377 gR~~d~ik~~G~~v~p~EIE~~l~~~~p~V~~aavvg~~d~~~g~~~~~a~v~~~v~~~~~~-~~~~~~l~~~~~~~l~~ 455 (499)
T PLN03051 377 GRADDTMNLGGIKTSSVEIERACDRAVAGIAETAAVGVAPPDGGPELLVIFLVLGEEKKGFD-QARPEALQKKFQEAIQT 455 (499)
T ss_pred eccCCEEeeCCEECCHHHHHHHHHhcCCCcceEEEEEecCCCCCceEEEEEEEcceeccccc-ccchHHHHHHHHHHHHh
Confidence 9999999999999999999999996 999999999999999888 6788888 6665431 13456666655 45
Q ss_pred cCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHHhc
Q 045072 512 RLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMG 549 (556)
Q Consensus 512 ~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~~ 549 (556)
+++++..|..++++++||+|++||++|++|++.+.+..
T Consensus 456 ~l~~~~~~~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~ 493 (499)
T PLN03051 456 NLNPLFKVSRVKIVPELPRNASNKLLRRVLRDQLKKEL 493 (499)
T ss_pred hcCCccCCceEEEcCCCCCCCCccHHHHHHHHHHHHhh
Confidence 57776777789999999999999999999998876544
No 110
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-60 Score=502.33 Aligned_cols=502 Identities=21% Similarity=0.250 Sum_probs=391.7
Q ss_pred CCHHHHHHHHHHhcCCCCEEEECC---ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 045072 14 LTPLGFLERAATVYGDCPSIIYNN---LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAI 90 (556)
Q Consensus 14 ~t~~~~l~~~~~~~p~~~a~~~~~---~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (556)
.++.++|+..++.+|+..++...+ +.+||.||++++.++|.+|++.|+++||+|+++++|+++++++++||+++|++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 100 (579)
T PRK09192 21 PTLVEALDYAALGEAGMNFYDRRGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFFACQYAGLV 100 (579)
T ss_pred hhHHHHHHHhhccCCceEEEecCCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHHHHHHcCCe
Confidence 589999999999888776654333 67999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCC-------HHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCC
Q 045072 91 LNNINTRLD-------ARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSN 163 (556)
Q Consensus 91 ~v~l~~~~~-------~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (556)
++++++..+ .+++.++++.+++++++++++..+.+........ .....
T Consensus 101 ~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~~------~~~~~------------------- 155 (579)
T PRK09192 101 PVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGNP------LLHVL------------------- 155 (579)
T ss_pred eEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhcccc------cccee-------------------
Confidence 999987543 5899999999999999998876655554321111 00100
Q ss_pred cccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhh-hcCCCCCCEEEEecChhhhh
Q 045072 164 FCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLI-DWSIPKQPVYLWTLPMFHAN 242 (556)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~pl~~~~ 242 (556)
.+.++......... .....++++++++|||||||.||+|.++|++++.++..... .+++..+|+++..+|++|.+
T Consensus 156 ---~~~~~~~~~~~~~~-~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~ 231 (579)
T PRK09192 156 ---SHAWFKALPEADVA-LPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVRPGDRCVSWLPFYHDM 231 (579)
T ss_pred ---ehhhhcccCCCccc-cCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCCCCCeEEEeCCCCCcc
Confidence 11111111111111 11245679999999999999999999999999888777666 67889999999999999999
Q ss_pred hchh-hhHhHhcCcEeEEecC----CCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC-----CCCCCCCeEEEEeCCCC
Q 045072 243 GWSY-PWGMAAVGGTNVCLRK----FDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR-----SEPLRNPVHILTAGAPP 312 (556)
Q Consensus 243 g~~~-~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~-----~~~l~~l~~v~~~g~~~ 312 (556)
|+.. ++.++..|+++++... .++..+++.+.++++++++..|..+..+..... ...++++|.+++||+++
T Consensus 232 g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG~~l 311 (579)
T PRK09192 232 GLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGADMI 311 (579)
T ss_pred hhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecCccC
Confidence 9876 4556777888766652 368899999999999988876665555543221 24577999999999999
Q ss_pred cHHHHHHhHhc----C---CeEEecccccccccceeecccccccc------------C---CC--hhhhccccccCcccc
Q 045072 313 PAAVLFRTESL----G---FLVSHGYGLTETAGLVVSCAWKNKWN------------R---LP--ATERARMKSRQGVRT 368 (556)
Q Consensus 313 ~~~~~~~~~~~----~---~~l~~~yG~tE~~~~~~~~~~~~~~~------------~---~~--~~~~~~~~~~~G~~~ 368 (556)
++...+.+.+. + ..+++.||+||+++.+.......... . .+ .........++|.+.
T Consensus 312 ~~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~ 391 (579)
T PRK09192 312 RPDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKAL 391 (579)
T ss_pred CHHHHHHHHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcC
Confidence 99999887643 2 24899999999987655432211000 0 00 000001124789999
Q ss_pred ceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEe
Q 045072 369 VCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVII 448 (556)
Q Consensus 369 ~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~ 448 (556)
++. +++|+|+ ++..++.+ +.|||+++|+.++.||+++ ..+...+..++||+|||+|++ ++|++++.||.+|+|+
T Consensus 392 p~~-~v~i~d~-~~~~~~~g--~~Gel~i~g~~~~~gY~~~-~~~~~~~~~dgw~~TGDlg~~-~~G~l~~~GR~dd~i~ 465 (579)
T PRK09192 392 PGH-EIEIRNE-AGMPLPER--VVGHICVRGPSLMSGYFRD-EESQDVLAADGWLDTGDLGYL-LDGYLYITGRAKDLII 465 (579)
T ss_pred CCc-EEEEECC-CCCCCCCC--CEEEEEecCCchhhhhcCC-ccccccccCCceeeccceeeE-ECCEEEEEeccccEEE
Confidence 999 9999997 67888877 7899999999999999999 566666777999999999999 8999999999999999
Q ss_pred eCcEeeChHHHHHHHhcCCCcc--ccEEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCC-CCcccceeEEe
Q 045072 449 SGGENLSSVEVESVLYTNPAVN--EAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLP-RYMVPKTVVFK 525 (556)
Q Consensus 449 ~~G~~v~~~~ie~~l~~~~~i~--~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~-~~~~p~~~~~v 525 (556)
.+|++|+|.+||+.|.++|+|. +++|++.+++. ++.++++++..+... .+.+++.+++++.+. .++.|..+.++
T Consensus 466 ~~G~~v~p~eIE~~l~~~p~V~~~~~~v~~~~~~~-~~~~~~~v~~~~~~~--~~~~~l~~~~~~~l~~~~~~~~~i~~~ 542 (579)
T PRK09192 466 INGRNIWPQDIEWIAEQEPELRSGDAAAFSIAQEN-GEKIVLLVQCRISDE--ERRGQLIHALAALVRSEFGVEAAVELV 542 (579)
T ss_pred ECCCccCHHHHHHHHHhcCCccCCcEEEEEeccCC-CeeEEEEEEecCCCh--HHHHHHHHHHHHHHHHHhCCCceEEEe
Confidence 9999999999999999999998 89999998875 457777776654432 456788888888764 57788888887
Q ss_pred c--CCCCCCCCCccHHHHHHHHHHhccccc
Q 045072 526 E--ELPKTSTGKIKKFELREMAKAMGKSKV 553 (556)
Q Consensus 526 ~--~lP~t~~GKv~r~~l~~~~~~~~~~~~ 553 (556)
. +||+|++||++|++|++++.+.....|
T Consensus 543 ~~~~lP~t~~GKv~R~~l~~~~~~~~~~~~ 572 (579)
T PRK09192 543 PPHSLPRTSSGKLSRAKAKKRYLSGAFASL 572 (579)
T ss_pred CCCCcCCCCCcchhHHHHHHHHHcCCCCcc
Confidence 5 899999999999999999987655544
No 111
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.1e-60 Score=501.67 Aligned_cols=500 Identities=21% Similarity=0.294 Sum_probs=372.8
Q ss_pred CCHHHHHHHHHHhcCCCCEEEECC---------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHh
Q 045072 14 LTPLGFLERAATVYGDCPSIIYNN---------LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAI 84 (556)
Q Consensus 14 ~t~~~~l~~~~~~~p~~~a~~~~~---------~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~ 84 (556)
+++.+.|++++..+|+++|+++.+ +++||.||.++++++|++|.+.| .+||+|+++++|++++++++|||
T Consensus 1 ~s~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~ 79 (578)
T PRK05850 1 SSVPSLLRERASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGA 79 (578)
T ss_pred CcHHHHHHHHHhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHH
Confidence 368899999999999999998642 68999999999999999999999 68999999999999999999999
Q ss_pred hhccceEeccCC---CCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccC
Q 045072 85 PFTGAILNNINT---RLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVD 161 (556)
Q Consensus 85 ~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (556)
+++|++++|+++ ..+.+++.++++++++++++++++..+.+.......... ....++..+. .
T Consensus 80 ~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~------------- 144 (578)
T PRK05850 80 LQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQ-SAPPVIEVDL-L------------- 144 (578)
T ss_pred HHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccc-cccceEeecc-c-------------
Confidence 999999999997 457899999999999999999987766554432211100 0111221110 0
Q ss_pred CCcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhh-cC-----CCCCCEEEEe
Q 045072 162 SNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLID-WS-----IPKQPVYLWT 235 (556)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~-~~-----~~~~~~~~~~ 235 (556)
.+ ..... .......++++++++|||||||.||||.++|++++.++...... +. ...++++++.
T Consensus 145 -----~~---~~~~~---~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 213 (578)
T PRK05850 145 -----DL---DSPRG---SDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSW 213 (578)
T ss_pred -----cc---ccCCc---cccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEE
Confidence 00 00000 00112356799999999999999999999999998766544332 12 3557899999
Q ss_pred cChhhhhhchh-hhHhHhcCcEeEEecC----CCHHHHHHHHHHhCCcEEechhHH-HHHHHcCCC-----CCCCCCCeE
Q 045072 236 LPMFHANGWSY-PWGMAAVGGTNVCLRK----FDAAVIYKMIRQHGVTHMCGAPVV-LNMISNLPR-----SEPLRNPVH 304 (556)
Q Consensus 236 ~pl~~~~g~~~-~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~-~~~l~~~~~-----~~~l~~l~~ 304 (556)
+|++|..|+.. .+.+++.|+++++.++ .++..+++.+++++++.. .+|.+ +..+..... ...++++|.
T Consensus 214 ~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~lr~ 292 (578)
T PRK05850 214 LPFYHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDLGGVLG 292 (578)
T ss_pred CCCCCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcchhhhee
Confidence 99999999865 6778889999888864 378999999999999865 45554 333332111 235678999
Q ss_pred EEEeCCCCcHHHHHHhHh-c---C---CeEEecccccccccceeeccccccc--cCCChhhh------------cccccc
Q 045072 305 ILTAGAPPPAAVLFRTES-L---G---FLVSHGYGLTETAGLVVSCAWKNKW--NRLPATER------------ARMKSR 363 (556)
Q Consensus 305 v~~~g~~~~~~~~~~~~~-~---~---~~l~~~yG~tE~~~~~~~~~~~~~~--~~~~~~~~------------~~~~~~ 363 (556)
+++||+++++.+.+++.+ + + ..+++.||+||++..+......... ..+..... .....+
T Consensus 293 ~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 372 (578)
T PRK05850 293 IISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVS 372 (578)
T ss_pred EEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEe
Confidence 999999999999888763 3 2 3689999999987544332111000 00000000 001112
Q ss_pred CccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccCCCCccccCcC-----------CCCceecCceEEEe
Q 045072 364 QGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMK-----------DDGWFYTGDVGVIH 432 (556)
Q Consensus 364 ~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~-----------~~~~~~TGD~~~~~ 432 (556)
.|.|. +. +++|+|++++.+++.+ +.|||+++|+.++.||+++++.+...|. .++||+|||+|+++
T Consensus 373 ~g~p~-~~-~~~ivd~~~~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~ 448 (578)
T PRK05850 373 YGSPR-SP-TVRIVDPDTCIECPAG--TVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS 448 (578)
T ss_pred ccCCC-CC-EEEEEcCCCCcCCCCC--CEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE
Confidence 34332 34 8999998778888888 7899999999999999999998887773 25799999999998
Q ss_pred cCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEecccccCCC----CHHHHHHH
Q 045072 433 ADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKP----TEKEIIEY 508 (556)
Q Consensus 433 ~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~----~~~~i~~~ 508 (556)
||++++.||.+|+|+.+|++|+|.+||++|.+++.+ +++|++++++ .++.++++|++.+...... ...++.+.
T Consensus 449 -~G~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~~-~~~v~~v~~~-~~~~~~a~v~~~~~~~~~~~~~~~~~~l~~~ 525 (578)
T PRK05850 449 -EGELFIVGRIKDLLIVDGRNHYPDDIEATIQEITGG-RVAAISVPDD-GTEKLVAIIELKKRGDSDEEAMDRLRTVKRE 525 (578)
T ss_pred -CCEEEEEcccccEEEECCeecCHHHHHHHHHHhcCC-cEEEEEecCC-CceEEEEEEEeccccCcchhhhhhHHHHHHH
Confidence 999999999999999999999999999999999985 5888888876 6788999998876533111 13455555
Q ss_pred HHhcCCC--CcccceeEEec--CCCCCCCCCccHHHHHHHHHHh
Q 045072 509 CRARLPR--YMVPKTVVFKE--ELPKTSTGKIKKFELREMAKAM 548 (556)
Q Consensus 509 l~~~l~~--~~~p~~~~~v~--~lP~t~~GKv~r~~l~~~~~~~ 548 (556)
+.+.+.. ...|..+.+++ +||+|++||++|++|++.|.+.
T Consensus 526 v~~~l~~~~~~~~~~~~~~~~~~iP~t~~GKi~R~~l~~~~~~~ 569 (578)
T PRK05850 526 VTSAISKSHGLSVADLVLVAPGSIPITTSGKIRRAACVEQYRQD 569 (578)
T ss_pred HHHHHHHHhCCCceEEEEeCCCCcCCCCCchHHHHHHHHHHHcC
Confidence 5544432 23455666664 8999999999999999998764
No 112
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=1.5e-60 Score=486.24 Aligned_cols=436 Identities=30% Similarity=0.463 Sum_probs=367.2
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEecc
Q 045072 41 TWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQ 120 (556)
Q Consensus 41 Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 120 (556)
||+||.++++++|..|.+.|+++||+|+++++|+++++++++||+++|++++++++.++.+++.+++++++++++++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred chhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCC
Q 045072 121 SRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTT 200 (556)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTT 200 (556)
..... . ... .+...................+++++++||||||
T Consensus 81 ~~~~~------~-------~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtT 123 (436)
T TIGR01923 81 LEEKD------F-------QAD------------------------SLDRIEAAGRYETSLSASFNMDQIATLMFTSGTT 123 (436)
T ss_pred ccccc------e-------eec------------------------chHhhhhcccccccccccCCcCceEEEEeCCCCC
Confidence 32110 0 000 0000000000000011124567899999999999
Q ss_pred CCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEE
Q 045072 201 SSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHM 280 (556)
Q Consensus 201 G~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~ 280 (556)
|.||+|.++|+++..........+++.++|++++.+|++|.+++..++.++..|+++++.+.+ ..+++.++++++|++
T Consensus 124 G~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~--~~~~~~l~~~~~t~~ 201 (436)
T TIGR01923 124 GKPKAVPHTFRNHYASAVGSKENLGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF--NQLLEMIANERVTHI 201 (436)
T ss_pred CCCcEEEEehHHHHHHHHHHHhhcCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH--HHHHHHHHHhCCeEE
Confidence 999999999999988888877788899999999999999999998888899999999888655 399999999999999
Q ss_pred echhHHHHHHHcCCCCCCCCCCeEEEEeCCCCcHHHHHHhHhcCCeEEecccccccccceeeccccccccCCChhhhccc
Q 045072 281 CGAPVVLNMISNLPRSEPLRNPVHILTAGAPPPAAVLFRTESLGFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARM 360 (556)
Q Consensus 281 ~~~p~~~~~l~~~~~~~~l~~l~~v~~~g~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (556)
.++|+++..+....... +++|.++++|+++++++.+++.+.++.+++.||+||++..++..... . ...
T Consensus 202 ~~~P~~l~~l~~~~~~~--~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~---------~-~~~ 269 (436)
T TIGR01923 202 SLVPTQLNRLLDEGGHN--ENLRKILLGGSAIPAPLIEEAQQYGLPIYLSYGMTETCSQVTTATPE---------M-LHA 269 (436)
T ss_pred EeHHHHHHHHHhCcCCC--CceEEEEECCCCCCHHHHHHHHHhCCceeeEecCCccchhccCcCcc---------c-ccc
Confidence 99999999998775432 78999999999999999998888899999999999998765543211 0 011
Q ss_pred cccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEE
Q 045072 361 KSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIK 440 (556)
Q Consensus 361 ~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~ 440 (556)
..++|.+.+++ +++|.+++.+ +.|||+++|+.++.||++++..+...+. ++||+|||++++++||.+++.
T Consensus 270 ~~~~G~~~~~~-~~~i~~~~~~--------~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~~~~~TGD~~~~~~dg~~~~~ 339 (436)
T TIGR01923 270 RPDVGRPLAGR-EIKIKVDNKE--------GHGEIMVKGANLMKGYLYQGELTPAFEQ-QGWFNTGDIGELDGEGFLYVL 339 (436)
T ss_pred ccCCCccCCCc-EEEEEeCCCC--------CceEEEEECCccchhhCCChhhhhhhhc-CCCeeccceEEEcCCCCEEEe
Confidence 12489999988 8888443222 4699999999999999998777765554 799999999999999999999
Q ss_pred ccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccc
Q 045072 441 DRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPK 520 (556)
Q Consensus 441 GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~ 520 (556)
||.+|+|+.+|.+|++.+||+.+.+++.|.+++|++.+++..|..++++++..++ .+.+++.+++++.++++++|.
T Consensus 340 GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~----~~~~~l~~~l~~~l~~~~~p~ 415 (436)
T TIGR01923 340 GRRDDLIISGGENIYPEEIETVLYQHPGIQEAVVVPKPDAEWGQVPVAYIVSESD----ISQAKLIAYLTEKLAKYKVPI 415 (436)
T ss_pred ccccCeEEeCCEeeCHHHHHHHHHhCCCeeEEEEeCCcchhcCCeeEEEEEECCC----CCHHHHHHHHHHhhhCCCCCe
Confidence 9999999999999999999999999999999999999887777788888887653 567899999999999999999
Q ss_pred eeEEecCCCCCCCCCccHHHH
Q 045072 521 TVVFKEELPKTSTGKIKKFEL 541 (556)
Q Consensus 521 ~~~~v~~lP~t~~GKv~r~~l 541 (556)
.++++++||+|++||++|++|
T Consensus 416 ~i~~~~~iP~t~~GK~~r~~L 436 (436)
T TIGR01923 416 AFEKLDELPYNASGKILRNQL 436 (436)
T ss_pred EEEEecCCCCCCCCceecccC
Confidence 999999999999999999865
No 113
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=9e-61 Score=450.62 Aligned_cols=525 Identities=21% Similarity=0.259 Sum_probs=421.6
Q ss_pred CCCCHHHHHHHHHHhcCCCCEEEECC-----------------------ccccHHHHHHHHHHHHHHHHHcCCCCCCE-E
Q 045072 12 SPLTPLGFLERAATVYGDCPSIIYNN-----------------------LIYTWSQTHRRCLQLASSLSSIGITRGHV-V 67 (556)
Q Consensus 12 ~~~t~~~~l~~~~~~~p~~~a~~~~~-----------------------~~~Ty~~l~~~~~~la~~L~~~g~~~gd~-V 67 (556)
.-.|+.+++++.++.+.++.++-+.+ ..+||.|+.+++.++|.+|.+.|++++++ +
T Consensus 39 g~~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~~~~~~gsGL~~lG~k~~e~k~ 118 (678)
T KOG1180|consen 39 GASTLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYERVHNFGSGLVKLGLKPKETKI 118 (678)
T ss_pred CcccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence 34689999999999999999986532 56999999999999999999999997776 9
Q ss_pred EEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCC
Q 045072 68 SVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADH 147 (556)
Q Consensus 68 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (556)
+|+++.+.+|+.+++||++-+...|.+...+..+.+.|-|++++++.+|++.+.+..+......... ...+|.++..
T Consensus 119 ~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~~~~~---vk~II~~d~i 195 (678)
T KOG1180|consen 119 AIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLKQAKT---VKHIIYFDPI 195 (678)
T ss_pred EEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHhccCc---eeEEEEecCC
Confidence 9999999999999999999999999999999999999999999999999999988876666555442 4455555532
Q ss_pred CCCCCCCCCcccc--CCCcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhc-
Q 045072 148 TDHDNDNKSSQTV--DSNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDW- 224 (556)
Q Consensus 148 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~- 224 (556)
. -.......... ......+|++++..+.....++.+..++|+|+|+|||||||.||||+++|+|+++.........
T Consensus 196 d-~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~~v~ 274 (678)
T KOG1180|consen 196 D-YDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGENVP 274 (678)
T ss_pred C-CccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCCCceEEEEEcCCCCCCCceEEEecccHHhhhhhhcccCc
Confidence 2 11111111111 1233578889888887775444455789999999999999999999999999998877766655
Q ss_pred CCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecCCCHH--------HHHHHHHHhCCcEEechhHHHHHHHcCCC-
Q 045072 225 SIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRKFDAA--------VIYKMIRQHGVTHMCGAPVVLNMISNLPR- 295 (556)
Q Consensus 225 ~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~~~~~--------~~~~~i~~~~~t~~~~~p~~~~~l~~~~~- 295 (556)
.+++.|+++..+||.|++.+.+-+.+++.|+.+-..++.+.. ..-..+..++||++.++|..++++.+-.-
T Consensus 275 ~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl~ 354 (678)
T KOG1180|consen 275 ELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGVLS 354 (678)
T ss_pred ccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhhhHHHHHHHHHHHHH
Confidence 589999999999999999999999999999998877643222 22234567899999999998876643210
Q ss_pred -------------------------------------------CCCCCCCeEEEEeCCCCcHHHHHHhH-hcCCeEEecc
Q 045072 296 -------------------------------------------SEPLRNPVHILTAGAPPPAAVLFRTE-SLGFLVSHGY 331 (556)
Q Consensus 296 -------------------------------------------~~~l~~l~~v~~~g~~~~~~~~~~~~-~~~~~l~~~y 331 (556)
..-..++|.+++||+|++++..+.+. -+.+++.++|
T Consensus 355 kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~C~Pv~qGY 434 (678)
T KOG1180|consen 355 KVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICFCCPVLQGY 434 (678)
T ss_pred HHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhccccccccc
Confidence 11233899999999999999999998 6677999999
Q ss_pred cccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccCCCC
Q 045072 332 GLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPN 411 (556)
Q Consensus 332 G~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~ 411 (556)
|.||+++-++.... .....+.+|.|+++. +++++|-+++-..+.+....|||||+|+.++.||+++++
T Consensus 435 GLTEtca~~tv~e~-----------~d~~~g~vG~pl~c~-eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~gY~kn~e 502 (678)
T KOG1180|consen 435 GLTETCAAATVLEP-----------EDFSTGRVGAPLPCC-EIKLVDWEEGGYFAKNKPPRGEILIGGPNVTMGYYKNEE 502 (678)
T ss_pred cccchhcccEecCh-----------hhcccccccCCccce-EEEEEEhhhcCccCCCCCCCceEEecCCccChhhhCChh
Confidence 99999887766431 223346899999999 999999656554444432469999999999999999999
Q ss_pred ccccCcCC-CC--ceecCceEEEecCCcEEEEccCCCeEe-eCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeE
Q 045072 412 GTRKCMKD-DG--WFYTGDVGVIHADGYLEIKDRSKDVII-SGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPC 487 (556)
Q Consensus 412 ~~~~~~~~-~~--~~~TGD~~~~~~dg~l~~~GR~~d~i~-~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~ 487 (556)
.+...|.. +| ||+|||+|++.+||+|.+..|.+|.+| .+|+-|++.-+|++++..|.|...+|...... ..++
T Consensus 503 kT~e~ft~~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~s~p~V~NICvyAd~~~---s~~V 579 (678)
T KOG1180|consen 503 KTKEDFTVEDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALRSSPYVDNICVYADSNK---SKPV 579 (678)
T ss_pred hhhhhceecCCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHHhcCcchhheEEeccccc---ceeE
Confidence 99999986 88 999999999999999999999999999 99999999999999999999999999988765 4689
Q ss_pred EEEEecccccC------CC-------------CHHHHHHHH-----HhcCCCCcccceeEEecC--CC----CCCCCCcc
Q 045072 488 AFLSLKAELEK------KP-------------TEKEIIEYC-----RARLPRYMVPKTVVFKEE--LP----KTSTGKIK 537 (556)
Q Consensus 488 ~~v~~~~~~~~------~~-------------~~~~i~~~l-----~~~l~~~~~p~~~~~v~~--lP----~t~~GKv~ 537 (556)
++|+++...-. .. ..+++.+.+ ..+|..+.+|..+++.++ =| .|+.-|+.
T Consensus 580 aiVVPn~~~lt~lA~k~Gi~~~~~e~lc~d~k~~~~v~k~L~~~ak~~~L~~iEip~~I~l~~e~WTPenGlvT~A~KLK 659 (678)
T KOG1180|consen 580 AIVVPNQKHLTKLAEKAGISGSTWEELCEDKKVVKAVLKELIEAAKSQKLERIEIPAKIVLSPEPWTPENGLVTAALKLK 659 (678)
T ss_pred EEEcCCchHHHHHHHHcCCChhhHHHHhccHHHHHHHHHHHHHHHHhcccccccccceeEecCCCcCCCccccHHHHHhh
Confidence 99998864210 00 112222333 235788899999988874 12 45567999
Q ss_pred HHHHHHHHHHhccccccC
Q 045072 538 KFELREMAKAMGKSKVSR 555 (556)
Q Consensus 538 r~~l~~~~~~~~~~~~~~ 555 (556)
|+.++..|.+.+++-|.+
T Consensus 660 Rk~I~~~~k~ei~~~Y~~ 677 (678)
T KOG1180|consen 660 RKEILAAYKKEIDRLYKE 677 (678)
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 999999999998887764
No 114
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-57 Score=459.77 Aligned_cols=406 Identities=20% Similarity=0.238 Sum_probs=352.0
Q ss_pred EEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccC
Q 045072 32 SIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSE 111 (556)
Q Consensus 32 a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 111 (556)
++++.++++||.||.++++++|..|. .|+++|++|+++++|+++++++++||+++|++++|+++..+.+++..++++++
T Consensus 1 ~~~~~~~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~ 79 (414)
T PRK08308 1 MLIVNDEEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAG 79 (414)
T ss_pred CeEecCceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCC
Confidence 46778899999999999999999985 68999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccccccccCCCCCCCCCCCCCCCcE
Q 045072 112 SKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESLVTKGDPNFKWIRPQNEWDPM 191 (556)
Q Consensus 112 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 191 (556)
++.+++++.... . ... ....+++++
T Consensus 80 ~~~~i~~~~~~~--------------~---------------------------~~~--------------~~~~~~~~~ 104 (414)
T PRK08308 80 CHGLLYGESDFT--------------K---------------------------LEA--------------VNYLAEEPS 104 (414)
T ss_pred CCEEEecCcccc--------------c---------------------------ccC--------------CCCCCCCce
Confidence 999998653100 0 000 013456899
Q ss_pred EEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchh-hhHhHhcCcEeEEecCCCHHHHHH
Q 045072 192 ILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSY-PWGMAAVGGTNVCLRKFDAAVIYK 270 (556)
Q Consensus 192 ~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~~~~~~~~~~ 270 (556)
+++|||||||.||+|.++|+++..+.......+.+..+++++..+|++|.+|+.. ++.++..|+++++.+.+++..+++
T Consensus 105 ~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~ 184 (414)
T PRK08308 105 LLQYSSGTTGEPKLIRRSWTEIDREIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALN 184 (414)
T ss_pred EEEECCCCCCCCcEEEEehHhHHHHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHH
Confidence 9999999999999999999999888777777778889999999999999999754 777888999999988899999999
Q ss_pred HHHHhCCcEEechhHHHHHHHcCCCCCCCCCCeEEEEeCCCCcHHHHHHhHhcCCeEEecccccccccceeecccccccc
Q 045072 271 MIRQHGVTHMCGAPVVLNMISNLPRSEPLRNPVHILTAGAPPPAAVLFRTESLGFLVSHGYGLTETAGLVVSCAWKNKWN 350 (556)
Q Consensus 271 ~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~l~~v~~~g~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~ 350 (556)
.++++++|.++++|+.+..+.+.... ..+++.++++|+++++++.+++++.+..+++.||+||++.+.....
T Consensus 185 ~l~~~~~t~~~~~P~~~~~l~~~~~~--~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~------ 256 (414)
T PRK08308 185 ILRNTPQHILYAVPLMLHILGRLLPG--TFQFHAVMTSGTPLPEAWFYKLRERTTYMMQQYGCSEAGCVSICPD------ 256 (414)
T ss_pred HHHHhCCeEEEcCHHHHHHHHhcCCc--cccccEEEEccCCCCHHHHHHHHHhCChhhhccCccccCCeeecCC------
Confidence 99999999999999999999876432 2368899999999999999999876789999999999975432110
Q ss_pred CCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccCCCCccccCcCCCCceecCceEE
Q 045072 351 RLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGV 430 (556)
Q Consensus 351 ~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~ 430 (556)
.....++|.|++++ ++++.+. . + +.|||++++. ++||+|||+|+
T Consensus 257 -------~~~~~~~G~p~~~~-~~~~~~~-~------~--~~gel~v~~~-------------------~~~~~TGDl~~ 300 (414)
T PRK08308 257 -------MKSHLDLGNPLPHV-SVSAGSD-E------N--APEEIVVKMG-------------------DKEIFTKDLGY 300 (414)
T ss_pred -------CCCCCccCccCCCe-EEEEecC-C------C--CCceEEEEcC-------------------CceEECCceEE
Confidence 11235789999998 8888653 1 2 4699999752 68999999999
Q ss_pred EecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHH
Q 045072 431 IHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCR 510 (556)
Q Consensus 431 ~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~ 510 (556)
+++||++++.||.+|+|+.+|++|+|.+||+.+.++|+|.+++|++.+++..|+.++++++..+. .+.+++.++++
T Consensus 301 ~~~dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~v~~~~~----~~~~~l~~~l~ 376 (414)
T PRK08308 301 KSERGTLHFMGRMDDVINVSGLNVYPIEVEDVMLRLPGVQEAVVYRGKDPVAGERVKAKVISHEE----IDPVQLREWCI 376 (414)
T ss_pred ECCCccEEEecccCCeEEECCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCCC----CCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888888888876543 56789999999
Q ss_pred hcCCCCcccceeEEecCCCCCCCCCccHHHH
Q 045072 511 ARLPRYMVPKTVVFKEELPKTSTGKIKKFEL 541 (556)
Q Consensus 511 ~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l 541 (556)
++++++++|..++++++||+|++||++|+.|
T Consensus 377 ~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~~ 407 (414)
T PRK08308 377 QHLAPYQVPHEIESVTEIPKNANGKVSRKLL 407 (414)
T ss_pred HhCccccCCcEEEEeccCCCCCCcCeehhhh
Confidence 9999999999999999999999999999954
No 115
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.4e-58 Score=479.58 Aligned_cols=493 Identities=20% Similarity=0.214 Sum_probs=376.6
Q ss_pred CHHHHHHHHHHhcCCCCEEEECC--ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEe
Q 045072 15 TPLGFLERAATVYGDCPSIIYNN--LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILN 92 (556)
Q Consensus 15 t~~~~l~~~~~~~p~~~a~~~~~--~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (556)
++.+.|...++.+|+.+++...+ +.+||.||+++++++|.+|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~ 82 (545)
T PRK07768 3 RFTEKMYANARTSPRGMVTGEPDAPVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLT 82 (545)
T ss_pred hHHHHHHHHhhCCCcceEEecCCCceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCcccc
Confidence 57888889999999999996655 6899999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHH-------HHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcc
Q 045072 93 NINTRLDARTI-------SVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFC 165 (556)
Q Consensus 93 ~l~~~~~~~~l-------~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (556)
++++..+.+++ .++++.++++.+++++............ ...+
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~------~~~~------------------------ 132 (545)
T PRK07768 83 MLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEEK------GIRV------------------------ 132 (545)
T ss_pred ccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhccc------CCce------------------------
Confidence 99998876544 4567778999999987654332211100 0011
Q ss_pred cccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCC-CEEEEecChhhhhhc
Q 045072 166 CTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQ-PVYLWTLPMFHANGW 244 (556)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~pl~~~~g~ 244 (556)
..+++++..... ......++++++++|||||||.||+|.++|+++...+......+++..+ |++++.+|++|..++
T Consensus 133 ~~~~~l~~~~~~---~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~ 209 (545)
T PRK07768 133 LTVADLLAADPI---DPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDMGM 209 (545)
T ss_pred eehhhhcccCCC---CcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccchHH
Confidence 122222221111 1112456899999999999999999999999998877776666777776 899999999999998
Q ss_pred hh-hhHhHhcCcEeEEecC----CCHHHHHHHHHHhCCcEEechhHHHHHHHcCC----C--CCCCCCCeEEEEeCCCCc
Q 045072 245 SY-PWGMAAVGGTNVCLRK----FDAAVIYKMIRQHGVTHMCGAPVVLNMISNLP----R--SEPLRNPVHILTAGAPPP 313 (556)
Q Consensus 245 ~~-~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~----~--~~~l~~l~~v~~~g~~~~ 313 (556)
.. ...++..|++++++++ .++..+++.+++++++++.+.|..+..+.+.. . ...++++|.++++|++++
T Consensus 210 ~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~ 289 (545)
T PRK07768 210 VGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPID 289 (545)
T ss_pred HHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCCC
Confidence 75 4556788888887764 37788999999999999988887776654322 1 356779999999999999
Q ss_pred HHHHHHhHh----cCC---eEEecccccccccceeeccccccc-------cC-------CCh-hhhccccccCcccccee
Q 045072 314 AAVLFRTES----LGF---LVSHGYGLTETAGLVVSCAWKNKW-------NR-------LPA-TERARMKSRQGVRTVCF 371 (556)
Q Consensus 314 ~~~~~~~~~----~~~---~l~~~yG~tE~~~~~~~~~~~~~~-------~~-------~~~-~~~~~~~~~~G~~~~~~ 371 (556)
++..+.+.+ ++. .+++.||+||++..+......... .. .+. ........++|.|.++.
T Consensus 290 ~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~ 369 (545)
T PRK07768 290 PADVEDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGL 369 (545)
T ss_pred HHHHHHHHHHHHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCC
Confidence 999888764 444 499999999998765433221100 00 000 00012335789999998
Q ss_pred eeeEEecCCCCceecCCCCeeeEEEEecCCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCc
Q 045072 372 TEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGG 451 (556)
Q Consensus 372 ~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G 451 (556)
.++|+|+ ++.+++.+ +.|||+++|+.+++||++.+..... +..++||+|||++++++||.+++.||.+|+|+.+|
T Consensus 370 -~~~i~~~-~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~-~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G 444 (545)
T PRK07768 370 -EVRVVDE-DGQVLPPR--GVGVIELRGESVTPGYLTMDGFIPA-QDADGWLDTGDLGYLTEEGEVVVCGRVKDVIIMAG 444 (545)
T ss_pred -EEEEECC-CCCCCCCC--CEEEEEEccCcccccccCCCCCccc-ccCCCeeeccceEEEecCCEEEEEccccceEEECC
Confidence 9999996 68888887 6899999999999999986554433 33478999999999999999999999999999999
Q ss_pred EeeChHHHHHHHhcCCCccccEEEeecC--CCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCC--cccceeEEec-
Q 045072 452 ENLSSVEVESVLYTNPAVNEAAVVARPD--EFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRY--MVPKTVVFKE- 526 (556)
Q Consensus 452 ~~v~~~~ie~~l~~~~~i~~~~v~~~~~--~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~--~~p~~~~~v~- 526 (556)
++|++.+||..+.++|+|.+++|++... ...++..+++++...... .....++.+.+++.+..+ ..|..+.+++
T Consensus 445 ~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~~~l~~~~~~~p~~v~~v~~ 523 (545)
T PRK07768 445 RNIYPTDIERAAARVEGVRPGNAVAVRLDAGHSREGFAVAVESNAFED-PAEVRRIRHQVAHEVVAEVGVRPRNVVVLGP 523 (545)
T ss_pred EecCHHHHHHHHHhCcccccceEEEEEecCCCCceEEEEEEEeccccc-HHHHHHHHHHHHHHHHHHhCCCccEEEEeCC
Confidence 9999999999999999999988877653 333444444444332211 123345666776665443 4677788876
Q ss_pred -CCCCCCCCCccHHHHHHHHH
Q 045072 527 -ELPKTSTGKIKKFELREMAK 546 (556)
Q Consensus 527 -~lP~t~~GKv~r~~l~~~~~ 546 (556)
+||+|++||++|+.|+++|.
T Consensus 524 ~~lP~t~~GKi~r~~l~~~~~ 544 (545)
T PRK07768 524 GSIPKTPSGKLRRANAAELVT 544 (545)
T ss_pred CcCCCCCchhHHHHHHHHhcC
Confidence 89999999999999999874
No 116
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=2.4e-57 Score=429.47 Aligned_cols=508 Identities=23% Similarity=0.260 Sum_probs=398.7
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCEEEECC--ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhc
Q 045072 10 NSSPLTPLGFLERAATVYGDCPSIIYNN--LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFT 87 (556)
Q Consensus 10 ~~~~~t~~~~l~~~~~~~p~~~a~~~~~--~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~ 87 (556)
.-...|+++++.++++++|+++|+++.+ +.+||+|+.+.++++|+.|...|++.||.|+++|+|.++++.++|+++++
T Consensus 73 rr~~~ti~~~F~~~vrr~p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaKl 152 (649)
T KOG1179|consen 73 RRERRTIAELFLSQVRRQPDKPAIIYEGPFQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAKL 152 (649)
T ss_pred hccCCcHHHHHHHHHHhCCCccEEEEeCCCceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHhh
Confidence 4567899999999999999999999987 69999999999999999999999999999999999999999999999999
Q ss_pred cceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccc
Q 045072 88 GAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCT 167 (556)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (556)
|++.+.||++...+.|.|.++.+++++++++.+..+.+.+..+.+... .-.+...+... ...+..+
T Consensus 153 Gv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~--~i~~~~~~~~~------------~~~g~~~ 218 (649)
T KOG1179|consen 153 GVITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKN--GIHVFSLGPTS------------VPDGIES 218 (649)
T ss_pred CceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhc--cceEEecCCCC------------CCchHHH
Confidence 999999999999999999999999999999999988877774433221 12222222111 1122334
Q ss_pred cccccccCCCCCC---CCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhc
Q 045072 168 YESLVTKGDPNFK---WIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGW 244 (556)
Q Consensus 168 ~~~~~~~~~~~~~---~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~ 244 (556)
+...++....++. .....+-.++++.+|||||||.||+.+++|...+..+.-....++++++|+++.++|++|..|.
T Consensus 219 L~~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ 298 (649)
T KOG1179|consen 219 LLAKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAAG 298 (649)
T ss_pred HHHhhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHHHH
Confidence 4444444444331 2223456799999999999999999999999988877767778999999999999999999887
Q ss_pred hh-hhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCCC-CCCCCCeEEEEeCCCCcHHHHHHhHh
Q 045072 245 SY-PWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPRS-EPLRNPVHILTAGAPPPAAVLFRTES 322 (556)
Q Consensus 245 ~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~-~~l~~l~~v~~~g~~~~~~~~~~~~~ 322 (556)
.. +-.++..|+++++-++|+..++|+.+.+|++|++.....+.+.|++.+.. ..-.+-.++..|.+-.++-..+..++
T Consensus 299 ilGi~~~l~~GaT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~HkVRla~GNGLR~diW~~Fv~R 378 (649)
T KOG1179|consen 299 ILGIGGCLLHGATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQHKVRLAYGNGLRPDIWQQFVKR 378 (649)
T ss_pred HHHHHHHHhcCceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcCceEEEEecCCCCchHHHHHHHH
Confidence 65 67788899999999999999999999999999999999999999998872 22223334445544445444445558
Q ss_pred cCCe-EEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCcee----------cCCCCe
Q 045072 323 LGFL-VSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSV----------SHDGAS 391 (556)
Q Consensus 323 ~~~~-l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~----------~~~~~~ 391 (556)
+|.. |.+.||+||...-......+.+-.. . .+.....+.+. ++--+|++++.++ ++| |
T Consensus 379 Fg~~~IgE~YgaTEgn~~~~N~d~~vGA~G-------~-~~~~~~~l~p~-~LIk~D~~t~E~iRd~~G~Ci~~~~G--E 447 (649)
T KOG1179|consen 379 FGIIKIGEFYGATEGNSNLVNYDGRVGACG-------F-MSRLLKLLYPF-RLIKVDPETGEPIRDSQGLCIPCPPG--E 447 (649)
T ss_pred cCCCeEEEEeccccCcceeeeecCcccccc-------c-hhhhhhhccce-EEEEecCCCCceeecCCceEEECCCC--C
Confidence 8765 9999999998654443321111000 0 00112223333 4444455555443 344 5
Q ss_pred eeEEEEe--c--C-CccccccCCCCccccCc------CCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHH
Q 045072 392 LGEIVFR--G--G-SMMLGYLKDPNGTRKCM------KDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVE 460 (556)
Q Consensus 392 ~Gel~i~--~--~-~~~~gy~~~~~~~~~~~------~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie 460 (556)
.|.++-+ . | .-|.||.+..+.+.... .+|-||.|||+-.+|+.|++||..|..|.++..|++|+..|+|
T Consensus 448 pGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGENVsTtEVe 527 (649)
T KOG1179|consen 448 PGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGENVSTTEVE 527 (649)
T ss_pred CceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCcccHHHHH
Confidence 6755433 2 2 23889999777665543 3567999999999999999999999999999999999999999
Q ss_pred HHHhcCCCccccEEEeecCC-CCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHH
Q 045072 461 SVLYTNPAVNEAAVVARPDE-FWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKF 539 (556)
Q Consensus 461 ~~l~~~~~i~~~~v~~~~~~-~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~ 539 (556)
++|....++.|+.|.|+.-+ ..|..-.|.|+..+... .+...+.+++++.||+|.+|..+.+.++|++|.+-|..+.
T Consensus 528 ~~l~~~~~~~dv~VYGV~VP~~EGRaGMAaI~~~p~~~--~d~~~l~~~l~~~LP~YA~P~FlRl~~~i~~TgTFKl~K~ 605 (649)
T KOG1179|consen 528 DVLSALDFLQDVNVYGVTVPGYEGRAGMAAIVLDPTTE--KDLEKLYQHLRENLPSYARPRFLRLQDEIEKTGTFKLQKT 605 (649)
T ss_pred HHHhhhccccceeEEEEecCCccCccceEEEEecCccc--chHHHHHHHHHhhCccccchHHHHHHhhhhcccchhhHHH
Confidence 99999999999999999865 34667778888777655 7899999999999999999999999999999999999999
Q ss_pred HHHHH
Q 045072 540 ELREM 544 (556)
Q Consensus 540 ~l~~~ 544 (556)
.|.+.
T Consensus 606 ~L~~e 610 (649)
T KOG1179|consen 606 ELQKE 610 (649)
T ss_pred HHHHc
Confidence 88764
No 117
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=2.4e-56 Score=452.64 Aligned_cols=397 Identities=26% Similarity=0.395 Sum_probs=315.6
Q ss_pred HHHHHHhcCCCCEEEE-CCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCC
Q 045072 20 LERAATVYGDCPSIIY-NNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRL 98 (556)
Q Consensus 20 l~~~~~~~p~~~a~~~-~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~ 98 (556)
|+++|+++||++|+++ .++.+||+||+++++++|.+|++.|+++||+|+++++|+++++++++||+++|++++|++|.+
T Consensus 1 f~~~a~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~l~~~~ 80 (417)
T PF00501_consen 1 FERQAQRYPDRIALIDDEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVPLDPSL 80 (417)
T ss_dssp HHHHHHHSTTSEEEEETTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS
T ss_pred ChhHHhhCCCceEEEECCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeeccccccccccccccccc
Confidence 6789999999999999 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhccCCeEEEE----eccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCccccccccccc
Q 045072 99 DARTISVLLQHSESKLVLV----DYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESLVTK 174 (556)
Q Consensus 99 ~~~~l~~~l~~~~~~~vi~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (556)
+.+++.++++.++++++|+ +......+......... ...++.++..... ..+.+...
T Consensus 81 ~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~----------------~~~~~~~~ 141 (417)
T PF00501_consen 81 SEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDP---SSSIIILDRDDLP----------------KKEALKSA 141 (417)
T ss_dssp SHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTT---TEEEEEESHSSCT----------------TCHHHHHH
T ss_pred ccccccccccccceeEEEEeccccccccccchhhhccccc---ccccccccccccc----------------cccccccc
Confidence 9999999999999999997 22222222222221110 1223333322110 00000000
Q ss_pred CCCCCCCCCC-CCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhh--hhcCCCCCCEEEEecChhhhhhc-hhhhHh
Q 045072 175 GDPNFKWIRP-QNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSL--IDWSIPKQPVYLWTLPMFHANGW-SYPWGM 250 (556)
Q Consensus 175 ~~~~~~~~~~-~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~ 250 (556)
....... .+ .+++++++++|||||||.||+|.++|+++...+.... ...+++ |++++.+|++|.+|+ ..++.+
T Consensus 142 ~~~~~~~-~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~ 218 (417)
T PF00501_consen 142 SLSDEPQ-SPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLISALLAA 218 (417)
T ss_dssp HHCHCSH-STTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHHHHHHH
T ss_pred ccccccc-cCCCCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeecccccccccccccccc
Confidence 0000000 00 0457999999999999999999999999988766643 222333 699999999999999 778999
Q ss_pred HhcCcEeEEecCCC---HHHHHHHHHHhCCcEEechhHHHHHHHcCCC------CCCCCCCeEEEEeCCCCcHHHHHHhH
Q 045072 251 AAVGGTNVCLRKFD---AAVIYKMIRQHGVTHMCGAPVVLNMISNLPR------SEPLRNPVHILTAGAPPPAAVLFRTE 321 (556)
Q Consensus 251 ~~~g~~~~~~~~~~---~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~------~~~l~~l~~v~~~g~~~~~~~~~~~~ 321 (556)
+..|+++++.+... +..+++.++++++|+++++|+++..+++..+ ...++++|.++++|+++++++.++++
T Consensus 219 l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~ 298 (417)
T PF00501_consen 219 LFSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLPPDLLRRLR 298 (417)
T ss_dssp HHCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHHHHHHHH
T ss_pred ccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccccccccccCChhhccccc
Confidence 99999999998644 4778999999999999999999999987321 24788899999999999999999998
Q ss_pred h-cCC-eEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEec
Q 045072 322 S-LGF-LVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRG 399 (556)
Q Consensus 322 ~-~~~-~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~ 399 (556)
+ ++. .+++.||+||++.+++... ........+++|.|++++ +++|+|++++.+++.+ +.|||+|+|
T Consensus 299 ~~~~~~~i~~~YG~tE~~~~~~~~~---------~~~~~~~~~~~G~~~~~~-~~~ivd~~~~~~~~~g--~~Gei~i~~ 366 (417)
T PF00501_consen 299 KAFGNAPIINLYGSTETGSIATIRP---------PEDDIEKPGSVGKPLPGV-EVKIVDPNTGEPLPPG--EPGEIVIRG 366 (417)
T ss_dssp HHHTTSEEEEEEEEGGGSSEEEEEE---------TTTHHSSTTSEBEESTTE-EEEEECTTTSSBESTT--SEEEEEEES
T ss_pred cccccccceecccccccceeeeccc---------cccccccccccccccccc-cccccccccccccccc--ccccccccC
Confidence 4 465 8999999999999886542 111122345789999999 9999999889999888 689999999
Q ss_pred CCccccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeC
Q 045072 400 GSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISG 450 (556)
Q Consensus 400 ~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~ 450 (556)
++++.||+++++.+...|.++|||+|||+|++|+||+++++||.+|+||++
T Consensus 367 ~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 367 PNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp TTSBSEETTBHHHHHHHEETTSEEEEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred CccceeeeccccccccccccccceecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 999999999998888888856899999999999999999999999999864
No 118
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=9.9e-52 Score=417.83 Aligned_cols=394 Identities=23% Similarity=0.261 Sum_probs=327.1
Q ss_pred cHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEec
Q 045072 41 TWSQTHRRCLQLASSLSS-IGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDY 119 (556)
Q Consensus 41 Ty~~l~~~~~~la~~L~~-~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 119 (556)
||.||.+.++++|.+|.+ .|+++||+|+++++|+++++++++||+++|++++++++.++.+++.++++.+++++++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 899999999999999998 8999999999999999999999999999999999999999999999999999999999988
Q ss_pred cchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCcccccccccccCCCCCCCCCCCCCCCcEEEEeccCC
Q 045072 120 QSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGT 199 (556)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGT 199 (556)
+....+.... ........... ..................+++++++|||||
T Consensus 81 ~~~~~~~~~~---------~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~i~~TSGT 131 (408)
T TIGR01733 81 ALASRLAGLV---------LPIILVDPLEL--------------------AALDDAPAPPPPDAPSGPDDLAYVIYTSGS 131 (408)
T ss_pred chhhhccccC---------CceEEechhhh--------------------hhcccccccccccCCCCCCCcEEEEEcCCC
Confidence 7654332210 11111111100 000000000000001346799999999999
Q ss_pred CCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecCC---CHHHHHHHHHHhC
Q 045072 200 TSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRKF---DAAVIYKMIRQHG 276 (556)
Q Consensus 200 TG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~~---~~~~~~~~i~~~~ 276 (556)
||.||+|.++|+++..........+.+..++++++..|++|..++...+.++..|+++++.+.. .+..+.+.+++++
T Consensus 132 tG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (408)
T TIGR01733 132 TGRPKGVVVTHRSLVNLLAWLARRYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHP 211 (408)
T ss_pred CCCCCEEEeccHHHHHHHHHHHHhcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcC
Confidence 9999999999999998888887788888999999999999999988899999999999988754 3689999999999
Q ss_pred CcEEechhHHHHHHHcCCCCCCCCCCeEEEEeCCCCcHHHHHHhH-hcC-CeEEecccccccccceeeccccccccCCCh
Q 045072 277 VTHMCGAPVVLNMISNLPRSEPLRNPVHILTAGAPPPAAVLFRTE-SLG-FLVSHGYGLTETAGLVVSCAWKNKWNRLPA 354 (556)
Q Consensus 277 ~t~~~~~p~~~~~l~~~~~~~~l~~l~~v~~~g~~~~~~~~~~~~-~~~-~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~ 354 (556)
+|.+.++|.+++.+.+... ..++++|.++++|+++++++.+.+. .++ +.+++.||+||++.++..........
T Consensus 212 ~t~l~~~p~~~~~l~~~~~-~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~---- 286 (408)
T TIGR01733 212 VTVLNLTPSLLALLAAALP-PALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDA---- 286 (408)
T ss_pred ceEEEeCHHHHHHHHHhhh-hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCcccc----
Confidence 9999999999999988764 6688999999999999999999988 555 89999999999987765322211100
Q ss_pred hhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccCCCCccccCcCCC------C--ceecC
Q 045072 355 TERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDD------G--WFYTG 426 (556)
Q Consensus 355 ~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~------~--~~~TG 426 (556)
... ...++|.+.++. +++|+|++ +.+++.+ +.|||+++|++++.||+++++.+...|..+ + ||+||
T Consensus 287 -~~~-~~~~~G~~~~~~-~~~i~~~~-~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TG 360 (408)
T TIGR01733 287 -PRE-SPVPIGRPLANT-RLYVLDDD-LRPVPVG--VVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTG 360 (408)
T ss_pred -CCc-cccccCcccCCc-eEEEECCC-CCCCCCC--CceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECC
Confidence 000 256899999999 99999985 8888887 689999999999999999998887776432 2 99999
Q ss_pred ceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEE
Q 045072 427 DVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAV 474 (556)
Q Consensus 427 D~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v 474 (556)
|++++|++|++++.||.+|+++.+|++++|.+||+.+..++.|.+++|
T Consensus 361 Dl~~~d~~g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~~~~~v~~~~v 408 (408)
T TIGR01733 361 DLVRYLPDGNLEFLGRIDDQVKIRGYRIELGEIEAALLRHPGVREAVV 408 (408)
T ss_pred ceEEEcCCCCEEEeeccCCEEEeCeEEechHHHHHHHhcCcchhhhcC
Confidence 999999999999999999999999999999999999999999998875
No 119
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=4.8e-48 Score=382.71 Aligned_cols=319 Identities=27% Similarity=0.387 Sum_probs=275.6
Q ss_pred CCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEe---cC
Q 045072 186 NEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCL---RK 262 (556)
Q Consensus 186 ~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~---~~ 262 (556)
.++++++++|||||||.||+|.++|+++.......... +...++++..+|++|..++..++.++..|++.++. ..
T Consensus 33 ~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~--~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~~~~~ 110 (358)
T PRK07824 33 IDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDR--LGGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELDVSAG 110 (358)
T ss_pred CCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhc--cCCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecCcCCC
Confidence 35799999999999999999999999998776654443 34567889999999999988888888889988773 35
Q ss_pred CCHHHHHHHHHHhC--CcEEechhHHHHHHHcCCC-CCCCCCCeEEEEeCCCCcHHHHHHhHhcCCeEEecccccccccc
Q 045072 263 FDAAVIYKMIRQHG--VTHMCGAPVVLNMISNLPR-SEPLRNPVHILTAGAPPPAAVLFRTESLGFLVSHGYGLTETAGL 339 (556)
Q Consensus 263 ~~~~~~~~~i~~~~--~t~~~~~p~~~~~l~~~~~-~~~l~~l~~v~~~g~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~ 339 (556)
+++..+++.+++++ .++...+|..+..+..... ...+++++.+++||+++++++.+++.+.++.+++.||+||+++.
T Consensus 111 ~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~v~~~YG~TE~~~~ 190 (358)
T PRK07824 111 FDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPAATAALAELDAVLVGGGPAPAPVLDAAAAAGINVVRTYGMSETSGG 190 (358)
T ss_pred cCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCccccCCcccceEEEECCCCCCHHHHHHHHhcCCcEEecccCCccCCC
Confidence 78999999999998 5666778888877766543 35678999999999999999999988889999999999998754
Q ss_pred eeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccCCCCccccCcCC
Q 045072 340 VVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKD 419 (556)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~ 419 (556)
+. ..|.|.+++ +++|.+ |||+++|+.++.||++++... .+..
T Consensus 191 ~~---------------------~~G~~~~g~-~v~i~~--------------Gei~v~g~~~~~gY~~~~~~~--~~~~ 232 (358)
T PRK07824 191 CV---------------------YDGVPLDGV-RVRVED--------------GRIALGGPTLAKGYRNPVDPD--PFAE 232 (358)
T ss_pred cC---------------------cCceeCCCC-EEEecC--------------CEEEEecCccccccCCCcccc--cccC
Confidence 31 247788877 777722 999999999999999988743 3445
Q ss_pred CCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEecccccCC
Q 045072 420 DGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKK 499 (556)
Q Consensus 420 ~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~ 499 (556)
+|||+|||+|++ ++|.+++.||.+|+|+.+|++|+|.+||..|.++|+|.+++|++.+++..|+.++++++..++..
T Consensus 233 ~g~~~TGDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~vv~~~~~~~g~~~~a~v~~~~~~~-- 309 (358)
T PRK07824 233 PGWFRTDDLGAL-DDGVLTVLGRADDAISTGGLTVLPQVVEAALATHPAVADCAVFGLPDDRLGQRVVAAVVGDGGPA-- 309 (358)
T ss_pred CCceecccEEEE-eCCEEEEEeccCCeEEECCEEECHHHHHHHHHhCCCcceEEEEecCCCCCceEEEEEEEeCCCCC--
Confidence 789999999999 89999999999999999999999999999999999999999999999888999999887765443
Q ss_pred CCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHH
Q 045072 500 PTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKA 547 (556)
Q Consensus 500 ~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 547 (556)
...+++.+++++.++.+++|..++++++||+|++||++|++|+++|.+
T Consensus 310 ~~~~~i~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 357 (358)
T PRK07824 310 PTLEALRAHVARTLDRTAAPRELHVVDELPRRGIGKVDRRALVRRFAG 357 (358)
T ss_pred cCHHHHHHHHHhhCccccCCCEEEEecCCCCCCCccccHHHHHHHhhc
Confidence 678899999999999999999999999999999999999999999865
No 120
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=1.6e-46 Score=411.99 Aligned_cols=485 Identities=16% Similarity=0.109 Sum_probs=357.0
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCCEEEEC---C--ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHH
Q 045072 9 ANSSPLTPLGFLERAATVYGDCPSIIYN---N--LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFA 83 (556)
Q Consensus 9 ~~~~~~t~~~~l~~~~~~~p~~~a~~~~---~--~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA 83 (556)
......|+.++|.+.++++|+++|+... + +++||+|+.++++++|.+|.+.|+++||+|+|+++|+++|+++++|
T Consensus 422 ~~~~~~Tl~dll~~~a~~~pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~lA 501 (1452)
T PTZ00297 422 PLAGVRSLGEMWERSVTRHSTFRCLGQTSESGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILEVA 501 (1452)
T ss_pred CcccCCCHHHHHHHHHHHCCCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 3344469999999999999999999742 3 5799999999999999999999999999999999999999999999
Q ss_pred hhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCC
Q 045072 84 IPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSN 163 (556)
Q Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (556)
|+++|++.+|+++ +.+++.+++++++++++|++.+....+.+.... ..+.++++++..+.... ..+.....
T Consensus 502 ~~~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~~-----~Lr~IIv~d~~~~~~~~--~~~~~~~i 572 (1452)
T PTZ00297 502 CALYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRSR-----KLETVVYTHSFYDEDDH--AVARDLNI 572 (1452)
T ss_pred HHHcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhccc-----CCcEEEEECCCcccccc--cccccCCc
Confidence 9999999999975 467899999999999999988776655543221 25667776532110000 00000011
Q ss_pred cccccccccccCCCCC-CCCCCCCCCCcEEEEe---ccCCCCCCceEEEchHHHHHHHhhhhhhc---CCCCCCEEEEec
Q 045072 164 FCCTYESLVTKGDPNF-KWIRPQNEWDPMILNY---TSGTTSSPKGVVHCHRGIFVMTVDSLIDW---SIPKQPVYLWTL 236 (556)
Q Consensus 164 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~i~~---TsGTTG~pK~v~~t~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 236 (556)
...+|++++..+.... ....+.+++|++.|+| ||||||.||||++||++++.++....... ...++|++++.+
T Consensus 573 ~~~s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~L 652 (1452)
T PTZ00297 573 TLIPYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFT 652 (1452)
T ss_pred ceeeHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEec
Confidence 2345777776653211 1112346788998885 99999999999999999998877655422 356789999999
Q ss_pred ChhhhhhchhhhHhHhcCcEeEEecCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC---------------------
Q 045072 237 PMFHANGWSYPWGMAAVGGTNVCLRKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--------------------- 295 (556)
Q Consensus 237 pl~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--------------------- 295 (556)
|++|.++....+.++..|+++.. +++..+++.+++++||+++++|.+++.+.+...
T Consensus 653 PLaHI~er~~~~~~l~~G~~I~~---~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k 729 (1452)
T PTZ00297 653 PFAMLFNRVFVLGLFAHGSAVAT---VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLR 729 (1452)
T ss_pred hHHHHHHHHHHHHHHHcCCEEEe---CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 99999997777778888888764 478999999999999999999999876643210
Q ss_pred -----------------------CCCCCCCeEEEEeCC--CCcHHHHHHhHhcCCeEEecccccccccceeecccccccc
Q 045072 296 -----------------------SEPLRNPVHILTAGA--PPPAAVLFRTESLGFLVSHGYGLTETAGLVVSCAWKNKWN 350 (556)
Q Consensus 296 -----------------------~~~l~~l~~v~~~g~--~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~ 350 (556)
..-..++|.+++||+ +++. ....++.+..+||+||.. .+....
T Consensus 730 ~~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~-----~l~~~i~i~~g~glTE~~--~~~~~~----- 797 (1452)
T PTZ00297 730 SRLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSF-----SLLEHISVCYVPCLREVF--FLPSEG----- 797 (1452)
T ss_pred HHHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccCh-----HHhCCceEEEecceEEee--eecCCC-----
Confidence 001146888888873 4442 233367889999999943 221110
Q ss_pred CCChhhhccccccCccccceeeeeEEecC-CCCceecCCCCeeeEEEEecCCccccccCCCCccccCcCCCCceecCceE
Q 045072 351 RLPATERARMKSRQGVRTVCFTEIDVIDS-ESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVG 429 (556)
Q Consensus 351 ~~~~~~~~~~~~~~G~~~~~~~~~~i~d~-~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~ 429 (556)
.. ...|.|++++ +++|.+. +.+.. . ..|||+++ |+++|+.|.. +. +||+
T Consensus 798 -------~~--~~~G~Plpgv-EvKI~~~~E~~~~--~---~~GEIlvr-------~~kdpe~T~e-~~-~gW~------ 847 (1452)
T PTZ00297 798 -------VF--CVDGTPAPSL-QVDLEPFDEPSDG--A---GIGQLVLA-------KKGEPRRTLP-IA-AQWK------ 847 (1452)
T ss_pred -------Cc--ccCCeecCce-EEEEcccccccCC--C---CCCeEEEE-------ECCChHHHHH-hh-CcCc------
Confidence 00 1239999999 9999874 22221 1 24999996 3578877765 22 4664
Q ss_pred EEecCCcEEEEccCCCeEe-eCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEecccccC---------C
Q 045072 430 VIHADGYLEIKDRSKDVII-SGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEK---------K 499 (556)
Q Consensus 430 ~~~~dg~l~~~GR~~d~i~-~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~---------~ 499 (556)
+||+|+|.||.+|.|| .+|+.|.|+.||+.+.++|.|.+++|++...+. ++|+|+++.+.-. .
T Consensus 848 ---~dG~L~IidRkKdlikls~GEyVaP~~IE~~l~~sp~I~qi~V~Gd~~k~----lvALVvpd~e~l~~~wa~~~gi~ 920 (1452)
T PTZ00297 848 ---RDRTLRLLGPPLGILLPVAYEYVIAAELERIFSQSRYVNDIFLYADPSRP----IIAIVSPNRDTVEFEWRQSHCMG 920 (1452)
T ss_pred ---cCCeEEEEeccccceECCCCcEEcHHHHHHHHhcCCCccEEEEEecCCCc----eEEEEEeCHHHHHHHHHHHcCCC
Confidence 6999999999999999 899999999999999999999999999987653 8898888753211 0
Q ss_pred --------CCHHH--------HHHHH---H--hcCCCCcccceeEEec-CC-----CCCCCCCccHHHHHHHHHHhcccc
Q 045072 500 --------PTEKE--------IIEYC---R--ARLPRYMVPKTVVFKE-EL-----PKTSTGKIKKFELREMAKAMGKSK 552 (556)
Q Consensus 500 --------~~~~~--------i~~~l---~--~~l~~~~~p~~~~~v~-~l-----P~t~~GKv~r~~l~~~~~~~~~~~ 552 (556)
....+ +.+.+ . +.+..+.++..+.+++ ++ -+||+.|++|+.+.+.|.+.++.-
T Consensus 921 ~~~~~~~~~~~~el~~~~~~~v~~~i~~V~~~n~l~~~ei~k~~~Ll~~~Ft~enGlLTPTlKlKR~~I~~kY~~~Ie~L 1000 (1452)
T PTZ00297 921 EGGGPARQLGWTELVAYASSLLTADFACIAKENGLHPSNVPEYVHLHPHAFKDHSTFLTPYGKIRRDAVHSYFSSVIERF 1000 (1452)
T ss_pred ccccccccCCHHHHHHhHHHHHHHHHHHHHHHhCcCccceeeEEEEeCCCCCCCCCcCChhhhhhHHHHHHHHHHHHHHH
Confidence 02222 33332 1 1245567777766654 44 389999999999999999998876
Q ss_pred cc
Q 045072 553 VS 554 (556)
Q Consensus 553 ~~ 554 (556)
|.
T Consensus 1001 Y~ 1002 (1452)
T PTZ00297 1001 YS 1002 (1452)
T ss_pred hc
Confidence 65
No 121
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=9.1e-39 Score=341.25 Aligned_cols=407 Identities=22% Similarity=0.238 Sum_probs=337.1
Q ss_pred CCCHHHHHHHHHHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEe
Q 045072 13 PLTPLGFLERAATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILN 92 (556)
Q Consensus 13 ~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (556)
..++...+.+.+...|+++|+.+.+.++||+++..+++++|..|.+.|+.+++.|+++++.++++++.++|++++|+.++
T Consensus 226 ~~~i~~~f~~~a~~~p~~~a~~~~~~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ilkaG~~yv 305 (642)
T COG1020 226 RLTIHLLFEEQAATTPDAVALVRGGQQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLAVLKAGAAYV 305 (642)
T ss_pred cchHHHHHHHHHHhCCCceeEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHHHHhcCCeEe
Confidence 36799999999999999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred ccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCccccccccc
Q 045072 93 NINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESLV 172 (556)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (556)
|++|.++.+++.+++++++++.+++......... . .+. +...... ..
T Consensus 306 P~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~----~------~~~-~~~~~~~-------------------~~--- 352 (642)
T COG1020 306 PLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDV----G------LPG-LALDDAL-------------------SE--- 352 (642)
T ss_pred cCCCCChHHHHHHHHhhcCccEEEeccccccccc----c------CCc-ccccccc-------------------cc---
Confidence 9999999999999999999999998733211000 0 000 0000000 00
Q ss_pred ccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchhhhHhHh
Q 045072 173 TKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSYPWGMAA 252 (556)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~ 252 (556)
.....+. .....+++.+|++|||||||.||||..+|+++.....+....+.+...|+++...++.+......++..+.
T Consensus 353 -~~~~~~~-~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~~~~d~~l~~~s~~fD~~~~~~f~~l~ 430 (642)
T COG1020 353 -IPDTDPI-PQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGLDADDRVLALASLSFDASVFEIFGALL 430 (642)
T ss_pred -CCccCcc-cccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCCCcccEEeecCCcccchhHHHHHHHHh
Confidence 0000000 11234579999999999999999999999999887777777788999999999999988888888999999
Q ss_pred cCcEeEEecC---CCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC----CCCCCCCeEEEEeCCCCcHHHHHHhHhc--
Q 045072 253 VGGTNVCLRK---FDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR----SEPLRNPVHILTAGAPPPAAVLFRTESL-- 323 (556)
Q Consensus 253 ~g~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----~~~l~~l~~v~~~g~~~~~~~~~~~~~~-- 323 (556)
.|++++.... .++..+...+.++++|++..+|..+..+..... ......++.+++||+.++......+...
T Consensus 431 ~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~ 510 (642)
T COG1020 431 EGARLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQLLSGGEALPLALVQRLLQLAA 510 (642)
T ss_pred CCCEEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccEEEEcCCCCCHHHHHHHHHhcc
Confidence 9999998874 689999999999999999999999999987632 2223358999999999999999887743
Q ss_pred -CCeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCc
Q 045072 324 -GFLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSM 402 (556)
Q Consensus 324 -~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~ 402 (556)
...+.+.||.||+...+........ ... ...+|.|+++. .+.|+|. .+.+++.+ ..||+++.|.++
T Consensus 511 ~~~~l~~~ygpTe~~~~~~~~~~~~~-------~~~--~~piG~p~~n~-~~~ild~-~~~~~p~g--v~gel~i~g~~~ 577 (642)
T COG1020 511 LARRLLNLYGPTEATLDAPSFPISAE-------LES--RVPIGRPVANT-QLYILDQ-GLRPLPLG--VPGELYIAGLGL 577 (642)
T ss_pred ccceEeeccCccHHhhheeeEEcccc-------cCC--CCCcceeeCCC-eEEEECC-CCCcCCCC--CCeeeEECCcch
Confidence 4689999999996554433321111 001 46899999997 9999994 78899988 679999999999
Q ss_pred cccccCCCCccccCcCCCCceecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCC
Q 045072 403 MLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNP 467 (556)
Q Consensus 403 ~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~ 467 (556)
.+||+++|+.+..+|..+++|+|||++++.+||.+.++||.|+++|++|++|.+.+||..+.++|
T Consensus 578 a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~~dg~~e~lgr~D~qvki~g~Riel~eie~~l~~~~ 642 (642)
T COG1020 578 ALGYLNRPDLTAERFIALRLYRTGDLARPLADGALEYLGRKDSQVKIRGFRIELGEIEAALAEQP 642 (642)
T ss_pred hhhhcCChhhhHHHhhhccCccCCCeeeECCCCeEEEeccccceeEeceEecCcHHHHHHHhcCC
Confidence 99999999999999985469999999999999999999999999999999999999999998764
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=7.2e-39 Score=314.54 Aligned_cols=288 Identities=24% Similarity=0.240 Sum_probs=228.1
Q ss_pred CCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCC--CCCEEEEecChhhhhhchh-hhHhHhcCcEeEEecCCC
Q 045072 188 WDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIP--KQPVYLWTLPMFHANGWSY-PWGMAAVGGTNVCLRKFD 264 (556)
Q Consensus 188 ~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~~~~ 264 (556)
+..++++|||||||.||+|.++|+++...+......+++. +.+++++.+|++|.+|+.. .+.++..|++++....++
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~~ 174 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAAP 174 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCCC
Confidence 4688999999999999999999999988776666666654 3467999999999988754 566778899998888888
Q ss_pred HHHHHHHHHHhCCcEEechhHHHHHHHcCCCCCCCCCCeEEEEeCCCCcHHHHHHhHhcCC-eEEecccccccccceeec
Q 045072 265 AAVIYKMIRQHGVTHMCGAPVVLNMISNLPRSEPLRNPVHILTAGAPPPAAVLFRTESLGF-LVSHGYGLTETAGLVVSC 343 (556)
Q Consensus 265 ~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~l~~v~~~g~~~~~~~~~~~~~~~~-~l~~~yG~tE~~~~~~~~ 343 (556)
+..+++.++.+ |+++++|++++.+.+.. ..+++++. +++|+++++++.+.+++.+. .+++.||+||++++++..
T Consensus 175 ~~~~l~~i~~~--t~~~~~P~~l~~l~~~~--~~l~slr~-i~gGa~l~~~l~~~~~~~g~~~v~~~YG~TEt~~i~~~~ 249 (386)
T TIGR02372 175 ASGIMRHARPG--DLIVGTPFIWEQLADLD--YRLPGVVG-VSSGAPSTAATWRCLLAAGLARLLEVYGATETGGIGLRE 249 (386)
T ss_pred hHHHHHhhccC--CEEEECcHHHHHHHhhC--cCCCccee-EecCCCCCHHHHHHHHHhcccchhheecccccccccccc
Confidence 88888887653 89999999999998653 34566765 67899999999999987664 699999999998765432
Q ss_pred cccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccCCCCccccCcCCCCce
Q 045072 344 AWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWF 423 (556)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~ 423 (556)
. ....|.+.++. ++.+ + ++ .+ .|+ ..|+
T Consensus 250 ~----------------~~~~~~~~p~~-~~~~-~--~~----------~~---~g~-------------------~~~~ 277 (386)
T TIGR02372 250 A----------------PDDPFRLLPDL-ACFA-D--TL----------SS---AGL-------------------ARRL 277 (386)
T ss_pred C----------------CCCCcccCCCc-cccC-C--Cc----------cC---CCc-------------------ccee
Confidence 1 01234455444 3222 1 11 00 011 2368
Q ss_pred ecCceEEEecCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEecccccCCCCHH
Q 045072 424 YTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEK 503 (556)
Q Consensus 424 ~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~ 503 (556)
+|||+++++++|++++.||.+|+|+.+|++|+|.+||+.|.++|+|.+++|.. .|+.+.++|++.++.......+
T Consensus 278 ~tgD~g~~d~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~p~V~~~~v~~-----~g~~~~a~vv~~~~~~~~~~~~ 352 (386)
T TIGR02372 278 DLQDRLAWDKDGGFTILGRKDEILQVGGVNVSPGHVRDILERNPRVRAAAVRL-----DGRRLKAFIVVAEDADEAELEI 352 (386)
T ss_pred ecCceEEEcCCCcEEEecccCCEEEECCEEEcHHHHHHHHHcCCCceEEEEEc-----CCceEEEEEEECCCCChHHHHH
Confidence 99999999999999999999999999999999999999999999999998863 2567888888876433112356
Q ss_pred HHHHHHHhcCCCCcccceeEEecCCCCCCCCCcc
Q 045072 504 EIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIK 537 (556)
Q Consensus 504 ~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~ 537 (556)
++.+++++++++|+.|..+.++++||+|++||++
T Consensus 353 ~l~~~~~~~L~~~~~P~~i~~~~~lP~t~~GKi~ 386 (386)
T TIGR02372 353 ELRATAARHLPAPARPDRFRFGTELPRTGAGKLA 386 (386)
T ss_pred HHHHHHHHhCCCCCCCcEEEEcccCCCCCCCCcC
Confidence 8999999999999999999999999999999985
No 123
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=1.4e-35 Score=299.27 Aligned_cols=320 Identities=18% Similarity=0.174 Sum_probs=235.1
Q ss_pred CCCCcEEEEeccCCCCCCceEEEchHHHHHHHh---hhhhhcCCCCCCEEEEecChhhhhh-chhhhHhHhcCcEeEEec
Q 045072 186 NEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTV---DSLIDWSIPKQPVYLWTLPMFHANG-WSYPWGMAAVGGTNVCLR 261 (556)
Q Consensus 186 ~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~pl~~~~g-~~~~~~~~~~g~~~~~~~ 261 (556)
+.++++++++||||||.||++.++|.++..+.. .....+++.++|++++..+..+..+ +...+.....|++++.++
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 152 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS 152 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC
Confidence 345788999999999999999999998865432 2333467889999887766543322 233455667788888877
Q ss_pred CCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCCC----CCCCCCeEEEEeCCCCcHHHHHHhH-hcCCeEEeccccccc
Q 045072 262 KFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPRS----EPLRNPVHILTAGAPPPAAVLFRTE-SLGFLVSHGYGLTET 336 (556)
Q Consensus 262 ~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~----~~l~~l~~v~~~g~~~~~~~~~~~~-~~~~~l~~~yG~tE~ 336 (556)
..++..+++.|++++||+++++|+++..|.+.... ....++|.++++||++++++.+.++ .+++.+++.||+||+
T Consensus 153 ~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~g~~v~~~YG~tE~ 232 (422)
T TIGR02155 153 GGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARLGMKATDIYGLSEV 232 (422)
T ss_pred CCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHhCCceEecccchhh
Confidence 77889999999999999999999999988764321 1235899999999999999999887 569999999999998
Q ss_pred cc--ceeeccccccccCCChhhhccccccCccccc--eeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccCCCCc
Q 045072 337 AG--LVVSCAWKNKWNRLPATERARMKSRQGVRTV--CFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNG 412 (556)
Q Consensus 337 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~--~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~ 412 (556)
++ ++..+.. ...|..+. .. .++|+|++++.++++| +.|||++++..
T Consensus 233 ~~~~~~~~~~~----------------~~~g~~~~~~~~-~~eivd~~~g~~v~~G--e~Gelvvt~~~----------- 282 (422)
T TIGR02155 233 IGPGVAMECVE----------------TQDGLHIWEDHF-YPEIIDPHTGEVLPDG--EEGELVFTTLT----------- 282 (422)
T ss_pred cCCceeecccc----------------cCCCceEecCee-EEEEECCCCCCCCCCC--CeeEEEEecCC-----------
Confidence 53 2222110 01122222 23 7789997789999888 68999999732
Q ss_pred cccCcCCCCceecCceEEEecC-C-----cEEEEccCCCeEeeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeee
Q 045072 413 TRKCMKDDGWFYTGDVGVIHAD-G-----YLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETP 486 (556)
Q Consensus 413 ~~~~~~~~~~~~TGD~~~~~~d-g-----~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~ 486 (556)
...+. .+||+|||+++++++ | .+++.||.+|+|+.+|.+|+|.+||.+|.++|+|...+++........+.+
T Consensus 283 -~~~~p-~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~~~v~~~~q~~~~~~~~~~~~ 360 (422)
T TIGR02155 283 -KEALP-VIRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKMDELSPHYQLELTRNGHMDEL 360 (422)
T ss_pred -ccccc-eeeEEcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhCcCcCCCEEEEEEcCCCccEE
Confidence 22232 679999999999876 4 468999999999999999999999999999999985454545444334566
Q ss_pred EEEEEecccccC-------CCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHH
Q 045072 487 CAFLSLKAELEK-------KPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKF 539 (556)
Q Consensus 487 ~~~v~~~~~~~~-------~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~ 539 (556)
.+.|+..++... ....++|.+.+++++..+.. ..+..+++||+|+ ||++|.
T Consensus 361 ~~~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-v~~~~~~~lp~~~-GK~~~~ 418 (422)
T TIGR02155 361 TLKVELKPESYTLRLHEQASLLAGEIQHTIKQEVGVSMD-VHLVEPGSLPRSE-GKARRV 418 (422)
T ss_pred EEEEEEecCcccccchHHHHHHHHHHHHHHHhccCcEEE-EEEECCCCccCCC-CCceEE
Confidence 676666543210 01246777888887765532 2344457999988 999873
No 124
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=100.00 E-value=3.6e-33 Score=281.89 Aligned_cols=516 Identities=17% Similarity=0.184 Sum_probs=359.9
Q ss_pred CCHHHHHHHHHHhcCCCCEEEECC------ccccHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCChHHHHHHHHHhhh
Q 045072 14 LTPLGFLERAATVYGDCPSIIYNN------LIYTWSQTHRRCLQLASSLSSI-GITRGHVVSVVAPNIPAMYEAHFAIPF 86 (556)
Q Consensus 14 ~t~~~~l~~~~~~~p~~~a~~~~~------~~~Ty~~l~~~~~~la~~L~~~-g~~~gd~V~i~~~~~~~~~~~~lA~~~ 86 (556)
.++.++|++.+..+|+.+|+...+ ..+||++|+.++.+++..|+.. -+++||.|+++++++.|++++++||+.
T Consensus 770 ~~ile~Lq~R~a~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly 849 (1363)
T KOG3628|consen 770 LTILEILQWRAAKTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLY 849 (1363)
T ss_pred HHHHHHHHHHhhcCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHh
Confidence 689999999999999999998754 6799999999999999999985 579999999999999999999999999
Q ss_pred ccceEeccCCCCCH------HHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCcccc
Q 045072 87 TGAILNNINTRLDA------RTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTV 160 (556)
Q Consensus 87 ~G~~~v~l~~~~~~------~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (556)
+|.+++|++|.... ..+..+++.+++.+|+++......++.-......+.+..+.+...+..... .
T Consensus 850 ~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~~t-------~- 921 (1363)
T KOG3628|consen 850 LGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLPET-------I- 921 (1363)
T ss_pred cCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccccchh-------h-
Confidence 99999999885432 677889999999999999876655553322222222222332222222100 0
Q ss_pred CCCcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhh
Q 045072 161 DSNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFH 240 (556)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~ 240 (556)
-.......+.... ..+.-.+...+|++-+.--++|.--++.++|.++++.++.......+.+..-++.+.+.+.
T Consensus 922 ----~k~~~~~~k~~~~--~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~~~~s 995 (1363)
T KOG3628|consen 922 ----RKRKKNIKKLNTP--TPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCSSPYS 995 (1363)
T ss_pred ----hhhhhhhhccCCC--CCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEEecCcc
Confidence 0001111111111 1111245678999999989999999999999999999999998888888888888888888
Q ss_pred hhhch-hhhHhHhcCcEeEEecC----CCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC--CCCCC-----CCeEEEE-
Q 045072 241 ANGWS-YPWGMAAVGGTNVCLRK----FDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR--SEPLR-----NPVHILT- 307 (556)
Q Consensus 241 ~~g~~-~~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~-----~l~~v~~- 307 (556)
+.|+. +.+...+.|...+++++ .++..++..++++++.-++.+-..++.+.+... ...++ ....++.
T Consensus 996 Glgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~s~vv~ 1075 (1363)
T KOG3628|consen 996 GLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSSSIVVP 1075 (1363)
T ss_pred chhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhcccccceeee
Confidence 77764 57888899999888875 589999999999999999998888888876554 11111 1113333
Q ss_pred eCCCCcHHHHHHhH----hcCC---eEEecccccccccceeecccccc----ccCCChhhhc------------cccccC
Q 045072 308 AGAPPPAAVLFRTE----SLGF---LVSHGYGLTETAGLVVSCAWKNK----WNRLPATERA------------RMKSRQ 364 (556)
Q Consensus 308 ~g~~~~~~~~~~~~----~~~~---~l~~~yG~tE~~~~~~~~~~~~~----~~~~~~~~~~------------~~~~~~ 364 (556)
.-++....+..-+. ..+. .+...|+..=.-.++....-... +........+ ......
T Consensus 1076 ~~~RPr~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dS 1155 (1363)
T KOG3628|consen 1076 AEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDS 1155 (1363)
T ss_pred cCCccHHHHHHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccccC
Confidence 34444444444443 2233 25566666544444433211111 0000000000 000123
Q ss_pred ccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccCCCCccc-cCc---------CCCCceecCceEEEe--
Q 045072 365 GVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTR-KCM---------KDDGWFYTGDVGVIH-- 432 (556)
Q Consensus 365 G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~-~~~---------~~~~~~~TGD~~~~~-- 432 (556)
|...+++ ++.|+++++-.++..+ +.||||+.|.+-+.+|++-.+... ..| ...+|-||||+|+..
T Consensus 1156 G~~~~~~-~i~IvnPEtk~pc~dg--e~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~t 1232 (1363)
T KOG3628|consen 1156 GKLPVYT-DIAIVNPETKGPCRDG--ELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLGFLRRT 1232 (1363)
T ss_pred Ccccccc-eeEEeCCccccccccC--CcceEEeccccccccccccCchhhhhhhhhhccccccccccceeeeeeeeeeee
Confidence 6667777 9999999999999998 789999999999888875432211 111 125699999999974
Q ss_pred ----cC----CcEEEEccCCCeEeeCcEeeChHHHHHHHhc-CCCccccEEEeecCCCCCeeeEEEEEecccccCCCCHH
Q 045072 433 ----AD----GYLEIKDRSKDVIISGGENLSSVEVESVLYT-NPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEK 503 (556)
Q Consensus 433 ----~d----g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~-~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~ 503 (556)
.. .-+|++|-+++.+.++|.+++|.+||..+.+ ||.|.+|+|+.... .++.+++...+........
T Consensus 1233 ~~t~~~~e~~~~LyVlG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~~cavF~~~g-----lvVvviE~~gq~~~~~LvP 1307 (1363)
T KOG3628|consen 1233 SLTDANVERHDLLYVLGAIDETLELNGLRHFPSDIETTVERVHPSIGGCAVFQATG-----LVVVVIECHGQQELADLVP 1307 (1363)
T ss_pred ecccccceeeeeEEEeecccceeeecCcccCcchHHHHHHHhcccccceeeEeeCC-----eEEEEEEecCchhHhhhhH
Confidence 22 2489999999999999999999999988775 99999999998743 4666666655322111222
Q ss_pred HHHHHHHhcCCCCc-ccceeEEec--CCCCCCCCCccHHHHHHHHHHhcccccc
Q 045072 504 EIIEYCRARLPRYM-VPKTVVFKE--ELPKTSTGKIKKFELREMAKAMGKSKVS 554 (556)
Q Consensus 504 ~i~~~l~~~l~~~~-~p~~~~~v~--~lP~t~~GKv~r~~l~~~~~~~~~~~~~ 554 (556)
-|...+ |..|. +...+.+|+ .+|+++.|..+|..+++.+.+.+...++
T Consensus 1308 lIv~~v---L~eH~iI~dvV~fV~~G~~p~~~~gEK~R~~I~~~w~~~kL~~~~ 1358 (1363)
T KOG3628|consen 1308 LIVNVV---LEEHYIILDVVAFVDKGVFPRNSRGEKQRAHILDSWLAGKLDPIY 1358 (1363)
T ss_pred HHHHHH---HhhcceEEEEEEEecCCccccCCchhhHHHHHHHHHHhcccceee
Confidence 233333 33444 445666666 6999999999999999999887766543
No 125
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.2e-31 Score=279.87 Aligned_cols=501 Identities=19% Similarity=0.202 Sum_probs=330.0
Q ss_pred CCHHHHHHHHHHhcCCCCEEEEC---C-----ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhh
Q 045072 14 LTPLGFLERAATVYGDCPSIIYN---N-----LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIP 85 (556)
Q Consensus 14 ~t~~~~l~~~~~~~p~~~a~~~~---~-----~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~ 85 (556)
.++...+.+.+...|...+..+- . .++||++....++.+++.|...|...|+.|++++..+.++++..+|++
T Consensus 36 g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~ 115 (1032)
T KOG1178|consen 36 GTLEDSFRRELAEAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVL 115 (1032)
T ss_pred cchhhHHHHHHhhcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeeehh
Confidence 35556777778888887776652 1 679999999999999999999999999999999999999999999999
Q ss_pred hccceEeccCCCCC----HH---HHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCcc
Q 045072 86 FTGAILNNINTRLD----AR---TISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQ 158 (556)
Q Consensus 86 ~~G~~~v~l~~~~~----~~---~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (556)
++|..+++++|+++ ++ ++++.+......++.- .+......... .++.-+...
T Consensus 116 ~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~~~----l~i~~~~~~~~-----~~~~sv~~~------------ 174 (1032)
T KOG1178|consen 116 AAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIVRR----LNIIDILLNSL-----FPKLSVETI------------ 174 (1032)
T ss_pred hcceEEEEecCCCcccccchHHHhhhhhheeccceehhh----hhhHHHHhhcc-----ccccchhhc------------
Confidence 99999999999999 33 2222222222221110 00000000000 000000000
Q ss_pred ccCCCcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecCh
Q 045072 159 TVDSNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPM 238 (556)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl 238 (556)
...+..+....... ..+..-++..+++.||||+||.||+|..+|..++....+....+....++++-.....
T Consensus 175 ------~~~f~~~~~~~~~r--~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~s~~~~~~~~~ 246 (1032)
T KOG1178|consen 175 ------ADSFQMVLHNEDTR--EIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTGSDRFTFKTSV 246 (1032)
T ss_pred ------cchhhhhhccCCCc--ceeeecccccceEeecccccccccccchhHHHHHhhhhhccccCCcCccchhhhhhee
Confidence 01111111111111 1112345678999999999999999999999998888887777777777776333333
Q ss_pred hhhhhchhhhHhHhcCcE-eEEecC---CCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC---------------CCCC
Q 045072 239 FHANGWSYPWGMAAVGGT-NVCLRK---FDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR---------------SEPL 299 (556)
Q Consensus 239 ~~~~g~~~~~~~~~~g~~-~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~---------------~~~l 299 (556)
+.+......+.++++.+. ++.+.. .++.++.+.+++++++..+.+|++.+.++.... ....
T Consensus 247 ~~~d~i~~~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~ 326 (1032)
T KOG1178|consen 247 YFDDTIQKFIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKR 326 (1032)
T ss_pred ecccchHHHHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccc
Confidence 233233334455555444 444433 357999999999999999999999777765543 2234
Q ss_pred CCCeEEEEeCCCCcHHHHHHhH-hc-CCeEEecccccccccceeeccccccccCCChhh---hccccccCccccceeeee
Q 045072 300 RNPVHILTAGAPPPAAVLFRTE-SL-GFLVSHGYGLTETAGLVVSCAWKNKWNRLPATE---RARMKSRQGVRTVCFTEI 374 (556)
Q Consensus 300 ~~l~~v~~~g~~~~~~~~~~~~-~~-~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~G~~~~~~~~~ 374 (556)
+.++....+|++....+...+. .+ -.....-|+.++..+.+....+.+.-.-+..+. .......+|... ..
T Consensus 327 ~~Lkl~~~~~ep~~v~l~~s~~~~~~~~~~~~~y~s~~~~~~~s~~~~~~s~~ll~~~~v~~~p~~~~~~~~~~----~~ 402 (1032)
T KOG1178|consen 327 SCLKLVVLGGEPLLVSLYTSTFDLLAEIFFGLPYLSTDPTGLVSYDDFSPSKVLLTNENVYSVPKFDSIIGSLT----VL 402 (1032)
T ss_pred hhheeeeecCCccchhhhhhhhhcccceeeeecccCCCCccceeHHhhCcccceecceeEEeccchhhccCCCc----ce
Confidence 4789999999999988877444 22 122223388888777665543322110000000 000000111111 11
Q ss_pred EEecCCCCceecCC--CCeeeEEEEecCCccccccCCCCccccCc-----CCCCceecCceEEEecCCcEEEEccCCCeE
Q 045072 375 DVIDSESGLSVSHD--GASLGEIVFRGGSMMLGYLKDPNGTRKCM-----KDDGWFYTGDVGVIHADGYLEIKDRSKDVI 447 (556)
Q Consensus 375 ~i~d~~~~~~~~~~--~~~~Gel~i~~~~~~~gy~~~~~~~~~~~-----~~~~~~~TGD~~~~~~dg~l~~~GR~~d~i 447 (556)
.+... .+.+...+ ....|.-...+..+..| +..++.....+ ..+..|+|||+|+.-++|.+.+.||.|++|
T Consensus 403 ~~~~~-~~~~~~~~v~~~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR~d~qI 480 (1032)
T KOG1178|consen 403 ESLYR-AGGEGEGGVGKGCLGAEQNLSSWVVDG-YSTPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGRADRQI 480 (1032)
T ss_pred eeeec-cCcccCCcccceeecccccccceeecc-ccchhhcCCcccccccchhhcccccccceeecCCCEEEEEeccceE
Confidence 22221 22222222 00112222222333344 22333222222 114579999999998899999999999999
Q ss_pred eeCcEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCcccceeEEecC
Q 045072 448 ISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEE 527 (556)
Q Consensus 448 ~~~G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~ 527 (556)
|.+|.++...+|+..+..+|.|.++.+....+.+.++.+.++|+.+..... .....|..++.+++..|++|..++.+++
T Consensus 481 K~rG~Ri~L~ei~t~v~~~p~v~~~itl~~~~~~~~~~l~aFvv~~~~~~~-~~~~~i~~~l~~~La~y~vPs~~V~l~~ 559 (1032)
T KOG1178|consen 481 KDRGVRIELGELNTVVEVHPDVKEAITLARENSTVGQTLLAFVVERGGSKS-VLIRDIRNYLKKELASYMLPSLVVPLAK 559 (1032)
T ss_pred EEccEEEehhhhchhhccCcchhhhheeeeeccccCceEEEEEeccCCCCc-hhHHHHHHhhcccccceecceEEEEhhh
Confidence 999999999999999999999999999999999889999999998877553 3477899999999999999999999999
Q ss_pred CCCCCCCCccHHHHHHHHHHhcc
Q 045072 528 LPKTSTGKIKKFELREMAKAMGK 550 (556)
Q Consensus 528 lP~t~~GKv~r~~l~~~~~~~~~ 550 (556)
+|+|++||||+++|.+.......
T Consensus 560 vPl~~~GKvDkkaL~~~~s~~~~ 582 (1032)
T KOG1178|consen 560 VPLNPNGKVDKKALLEYNSKLTN 582 (1032)
T ss_pred CCcCCCCCcChhhhhhhhhhhcc
Confidence 99999999999999995554433
No 126
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.96 E-value=5.5e-28 Score=243.94 Aligned_cols=319 Identities=17% Similarity=0.124 Sum_probs=212.1
Q ss_pred CCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhh---hhcCCCCCCEEEEecChhhhhhchh-hhHhHhcCcEeEEec
Q 045072 186 NEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSL---IDWSIPKQPVYLWTLPMFHANGWSY-PWGMAAVGGTNVCLR 261 (556)
Q Consensus 186 ~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~ 261 (556)
+.++++.+.+||||||.||++.+||+.+........ ...++.++|+++.+.+..+..+... ..++...|++++...
T Consensus 84 ~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~ 163 (445)
T TIGR03335 84 DWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEG 163 (445)
T ss_pred CHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCC
Confidence 455888999999999999999999998865544333 2347889999999888876655433 344566777655333
Q ss_pred CCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC----CCCCCCCeEEEEeCCCCcHHHHHHhH-hcCCeEEeccccccc
Q 045072 262 KFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR----SEPLRNPVHILTAGAPPPAAVLFRTE-SLGFLVSHGYGLTET 336 (556)
Q Consensus 262 ~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----~~~l~~l~~v~~~g~~~~~~~~~~~~-~~~~~l~~~yG~tE~ 336 (556)
.....++.++++++|.+.++|+.+..+.+... .....++|.++++||+++++++++++ .+++.+++.||+||+
T Consensus 164 --~~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~g~~v~~~YG~TE~ 241 (445)
T TIGR03335 164 --KCTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELWGCEVYNTYGSTEG 241 (445)
T ss_pred --chhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHhCCcEEecCChhhh
Confidence 23467899999999999999998877765332 11246899999999999999998887 569999999999998
Q ss_pred ccceeeccccccccCCChhhhccccccCcccc--ceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccCCCCccc
Q 045072 337 AGLVVSCAWKNKWNRLPATERARMKSRQGVRT--VCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTR 414 (556)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~--~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~ 414 (556)
+ ++..+... .|..+ +.. .++|+|++++.++++| +.|||++++-...- ....
T Consensus 242 ~-~~~~c~~~-----------------~g~h~~~d~~-~vEIvDp~~~~~vp~G--e~GELvvT~L~~~~------~r~~ 294 (445)
T TIGR03335 242 T-MCGECQAV-----------------AGLHVPEDLV-HLDVYDPRHQRFLPDG--ECGRIVLTTLLKPG------ERCG 294 (445)
T ss_pred h-heEEecCC-----------------CCccccCCce-EEEEEcCCCCCCCcCC--CceEEEEEecCCCC------ccCC
Confidence 5 33333211 12222 223 7899999888888888 78999998632100 0000
Q ss_pred cCcCCCCceecCceEEEec-C----C----cEEEEccCCCeEeeCcEeeChHHHHHHHhcC---CCccccEEEeecCCCC
Q 045072 415 KCMKDDGWFYTGDVGVIHA-D----G----YLEIKDRSKDVIISGGENLSSVEVESVLYTN---PAVNEAAVVARPDEFW 482 (556)
Q Consensus 415 ~~~~~~~~~~TGD~~~~~~-d----g----~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~---~~i~~~~v~~~~~~~~ 482 (556)
..+ -.|+|||++++.. + | ++...||.||+++++|.+|+|.+||++|.+. +++..-+.+....+..
T Consensus 295 ~Pl---iRYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~~~~~~~~~~~~~~~~~ 371 (445)
T TIGR03335 295 SLL---INYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENMDSLTGEYEAFLYGEEE 371 (445)
T ss_pred ceE---EEeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCCCCCCccEEEEEecCCC
Confidence 111 1399999999632 2 2 2445699999999999999999999999994 5554333333322222
Q ss_pred Ce-eeEEEEEecccccCCCCHHHHHHHHHhc----CC-------CCcccceeEEe--cCCCCCC-CCCccH
Q 045072 483 GE-TPCAFLSLKAELEKKPTEKEIIEYCRAR----LP-------RYMVPKTVVFK--EELPKTS-TGKIKK 538 (556)
Q Consensus 483 g~-~~~~~v~~~~~~~~~~~~~~i~~~l~~~----l~-------~~~~p~~~~~v--~~lP~t~-~GKv~r 538 (556)
+. .+.+.|+..+... ...+++.+.+.+. ++ ...+...+.++ ..|||++ .||..|
T Consensus 372 ~~~~~~v~~e~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~r 440 (445)
T TIGR03335 372 GEITLRVSLECEDKDN--CSIHDIQENFTGTFLKYKPELIGSYDEGIFQILVNFTGPGELELHKIKGRPKR 440 (445)
T ss_pred CCceEEEEEEecCccc--chHHHHHHHHHHHHhhhhhhhhhhhhcceEEEEEEEeCCCCccccccCCCcee
Confidence 22 3444455544322 2233333333332 21 12222334444 4799984 699876
No 127
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.96 E-value=2.6e-27 Score=225.72 Aligned_cols=321 Identities=20% Similarity=0.188 Sum_probs=231.0
Q ss_pred CCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhh---hcCCCCCCEEEEecChh-hhhhchhhhHhHhcCcEeEEe
Q 045072 185 QNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLI---DWSIPKQPVYLWTLPMF-HANGWSYPWGMAAVGGTNVCL 260 (556)
Q Consensus 185 ~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~pl~-~~~g~~~~~~~~~~g~~~~~~ 260 (556)
.+.++...+..||||||+|+-+.+++..+..++....+ ..+...+|++..+.... +..|+..-.++--.|++++-.
T Consensus 87 ~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~ 166 (438)
T COG1541 87 VPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPI 166 (438)
T ss_pred ccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEcc
Confidence 34457777999999999999999999987655444433 45778889887766532 222223334555578887777
Q ss_pred cCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCCC----CCCCCCeEEEEeCCCCcHHHHHHhH-hcCCeEEecccccc
Q 045072 261 RKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPRS----EPLRNPVHILTAGAPPPAAVLFRTE-SLGFLVSHGYGLTE 335 (556)
Q Consensus 261 ~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~----~~l~~l~~v~~~g~~~~~~~~~~~~-~~~~~l~~~yG~tE 335 (556)
++.+.+..+.+++.+++|++.++|+++..+.+..+. ..-.++|.+++|+|++++++++.++ .+|+..++.||+||
T Consensus 167 ~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~g~~~~diYGltE 246 (438)
T COG1541 167 SGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRFGCKAFDIYGLTE 246 (438)
T ss_pred CCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHhCCceeecccccc
Confidence 777889999999999999999999999999877762 2334899999999999999999999 77999999999999
Q ss_pred cccce-eeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEecCCccccccCCCCccc
Q 045072 336 TAGLV-VSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTR 414 (556)
Q Consensus 336 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~ 414 (556)
..+.. +.|......+.. .+.. .++|+||++|.+++.| +.|||+++.-. + ...
T Consensus 247 ~~g~g~~eC~~~~glhi~---------------eD~~-~~Ei~dP~t~e~l~dg--e~GelV~T~L~--~-------~~~ 299 (438)
T COG1541 247 GFGPGAGECTERNGLHIW---------------EDHF-IFEIVDPETGEQLPDG--ERGELVITTLT--K-------EGM 299 (438)
T ss_pred ccCCcccccccccCCCcc---------------hhhc-eeeeecCCcCccCCCC--CeeEEEEEecc--c-------cCc
Confidence 97773 444433322211 1122 8999999999999999 67999998622 1 011
Q ss_pred cCcCCCCceecCceEEEecC----Cc-----EEEEccCCCeEeeCcEeeChHHHHHHHhcCCCcc-ccEEEeecCCCCCe
Q 045072 415 KCMKDDGWFYTGDVGVIHAD----GY-----LEIKDRSKDVIISGGENLSSVEVESVLYTNPAVN-EAAVVARPDEFWGE 484 (556)
Q Consensus 415 ~~~~~~~~~~TGD~~~~~~d----g~-----l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~i~-~~~v~~~~~~~~g~ 484 (556)
. --.|+|||++.+.++ |+ ..+.||++|++++.|.+|+|.+||..|.+.+.+. +.+++... .....
T Consensus 300 P----lIRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~~~~~yqi~~~~-~~~~d 374 (438)
T COG1541 300 P----LIRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPEVTPHYQIILTR-NGGLD 374 (438)
T ss_pred c----eEEEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccCCCceEEEEEec-CCCCc
Confidence 1 114999999999763 32 4699999999999999999999999999999999 66666665 44445
Q ss_pred eeEEEEEecccccCCCCHHHHHHHHHhcCCCC-cccc--eeEEecCCCCCCCCCccH
Q 045072 485 TPCAFLSLKAELEKKPTEKEIIEYCRARLPRY-MVPK--TVVFKEELPKTSTGKIKK 538 (556)
Q Consensus 485 ~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~-~~p~--~~~~v~~lP~t~~GKv~r 538 (556)
.+.+.|++.+++.......++.+.+.+.+... .... .++.+.++||+.. |..|
T Consensus 375 ~L~V~vE~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~v~~g~l~r~~~-K~kr 430 (438)
T COG1541 375 ELTVRVELENEAEELEDERRLAKKLIKNIKSELGVRVEVELVEPGELPRTEG-KAKR 430 (438)
T ss_pred eEEEEEEecCcccchHHHHHHHHHHHHHHHhhcCCceEEEEEeccceecccC-ceeE
Confidence 67777877765332122333333443332211 2223 4455569999984 6554
No 128
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.94 E-value=1.1e-25 Score=204.65 Aligned_cols=218 Identities=12% Similarity=0.058 Sum_probs=163.2
Q ss_pred HHHHHHhcCCCCEEEECC------ccccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCChHHHHHHHHHhhhccceEe
Q 045072 20 LERAATVYGDCPSIIYNN------LIYTWSQTHRRCLQLASSLSS-IGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILN 92 (556)
Q Consensus 20 l~~~~~~~p~~~a~~~~~------~~~Ty~~l~~~~~~la~~L~~-~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (556)
|...++.+|+++|+++.+ +++||+||.++++++|++|++ .|+++||+|+|+++|++++++++|||+++|++++
T Consensus 2 ~~~~~~~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~v 81 (227)
T TIGR03089 2 LSPLLAADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVV 81 (227)
T ss_pred hhhhhhhCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE
Confidence 567888999999998532 369999999999999999998 7999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCccccCCCccccccccc
Q 045072 93 NINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSSQTVDSNFCCTYESLV 172 (556)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (556)
|++ ++++++++++++...... . ...++.+......... .... ..+...+.+.+
T Consensus 82 p~n-------------~s~a~~~v~~~~~~~~~~-----~-----~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~ 134 (227)
T TIGR03089 82 LAG-------------DPDADVVVTGPDRLAAAA-----G-----SGEVVALSLDPLGRRV--AGEL--PPGVIDFAPEV 134 (227)
T ss_pred eCC-------------CCCCCEEEeCcchhhhcc-----c-----CCceEEEeccccccCC--CCCC--CCcccchhhhh
Confidence 994 789999999887665532 1 1223333211100000 0000 11123455444
Q ss_pred ccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhhcCCCCCCEEEEecChhhhhhchh-hhHhH
Q 045072 173 TKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLIDWSIPKQPVYLWTLPMFHANGWSY-PWGMA 251 (556)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~-~~~~~ 251 (556)
........+.....++|++.++||||+ +|.+++.+. ...++.++|+++ .+|++|.+|+.. ++.++
T Consensus 135 ~~~~~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l 200 (227)
T TIGR03089 135 RVHGDQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAAGLPPGDRVL-VLAWTDLEDFLATLLAPL 200 (227)
T ss_pred hccCCCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhcCCCCCCeEE-ecCCCchHHHHHHHHHHh
Confidence 433333222212456899999999986 566655544 456788999999 999999999865 77889
Q ss_pred hcCcEeEEecCCCHHHHHHHHHHhCCc
Q 045072 252 AVGGTNVCLRKFDAAVIYKMIRQHGVT 278 (556)
Q Consensus 252 ~~g~~~~~~~~~~~~~~~~~i~~~~~t 278 (556)
..|+++++.++|++..+++.|+++|+|
T Consensus 201 ~~G~t~v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 201 AAGGSLVLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred ccCceEEEecCCCHHHHHHHHHhhcCC
Confidence 999999999999999999999999987
No 129
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=1.4e-21 Score=187.76 Aligned_cols=117 Identities=21% Similarity=0.284 Sum_probs=109.1
Q ss_pred CCceecCceEEE-ecCCcEEEEccCCCeEeeCc---EeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEeccc
Q 045072 420 DGWFYTGDVGVI-HADGYLEIKDRSKDVIISGG---ENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAE 495 (556)
Q Consensus 420 ~~~~~TGD~~~~-~~dg~l~~~GR~~d~i~~~G---~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~ 495 (556)
+|||+|||+|++ |+||++++.||.+ +| ++|+|. ||++|.+||+|.+|+|++++++.+|+.++|+|+....
T Consensus 208 dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~hp~V~eaaVvgvpd~~~ge~v~A~Vv~~~~ 281 (365)
T PRK09188 208 RIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKSDPAVSDVAIALFSLPAKGVGLYAFVEAELP 281 (365)
T ss_pred CcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHHhCCCccEEEEEEEEcCCCCeEEEEEEEECCC
Confidence 899999999998 6999999999998 78 899999 9999999999999999999999999999999987642
Q ss_pred ccCCCCHHHHHHHHHhcCCCCcccceeEEecCCCCCCCCCccHHHHHHHHHH
Q 045072 496 LEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKA 547 (556)
Q Consensus 496 ~~~~~~~~~i~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 547 (556)
.+.+++.++++++++. ++|..+.++++||+|++||++|++|++.+.+
T Consensus 282 ----~~~~el~~~l~~~L~~-kvP~~v~~v~~lP~t~~GKi~R~~Lr~~~~~ 328 (365)
T PRK09188 282 ----ADEKSLRARLAGAKPP-KPPEHIQPVAALPRDADGTVRDDILRLIAMN 328 (365)
T ss_pred ----CCHHHHHHHHHhhchh-cCCcEEEEECCCCCCCCCCccHHHHHHHhhc
Confidence 5788999999999999 9999999999999999999999999988643
No 130
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.86 E-value=8.5e-20 Score=185.93 Aligned_cols=509 Identities=14% Similarity=0.090 Sum_probs=330.5
Q ss_pred cCCCCCCCCCHHHHHHHHHHhcCCCCEEEECC-----ccccHHHHHHHHHHHHH-HHHHcCCCCCCEEEEEcCCh--HHH
Q 045072 6 PCTANSSPLTPLGFLERAATVYGDCPSIIYNN-----LIYTWSQTHRRCLQLAS-SLSSIGITRGHVVSVVAPNI--PAM 77 (556)
Q Consensus 6 ~~~~~~~~~t~~~~l~~~~~~~p~~~a~~~~~-----~~~Ty~~l~~~~~~la~-~L~~~g~~~gd~V~i~~~~~--~~~ 77 (556)
++-.+++...+...++..-.+++...|.+.-+ ..+||..+..++++.|+ .|.+-|+.++|+|.++...+ .++
T Consensus 86 tsss~~a~~d~~avl~~~~nhs~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~ 165 (1363)
T KOG3628|consen 86 TSSSMMALTDIIAVLRYRRNHSATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEF 165 (1363)
T ss_pred CchhhhhhcchHHHHHhhccCCCCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHH
Confidence 34445556667788888878889999988754 67999999999999999 77778999999999987655 889
Q ss_pred HHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcCCCCCCCCCeEEEcCCCCCCCCCCCc
Q 045072 78 YEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLFPSDIKCPPLVLIADHTDHDNDNKSS 157 (556)
Q Consensus 78 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (556)
++..++|...|.+++|+.+..+.+++..+++..+.+++++.......+...-. + .+..+.+- +...
T Consensus 166 ~isl~gc~l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~--~--~s~~k~v~----------~w~t 231 (1363)
T KOG3628|consen 166 LISLFGCFLLGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNS--P--VSLAKAVA----------WWKT 231 (1363)
T ss_pred hhhhccccccceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccC--c--ccHHHHHH----------hhhc
Confidence 99999999999999999999999999999999999999998765443322110 0 00000000 0000
Q ss_pred cccCCCcccccccccccCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhh-----------------
Q 045072 158 QTVDSNFCCTYESLVTKGDPNFKWIRPQNEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDS----------------- 220 (556)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~----------------- 220 (556)
. +..+...++ ... .++.... ..+|-||.+++|.--|++++|+ ++.+.+..
T Consensus 232 ~--~~k~~~~~~-----k~~----~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~ 298 (1363)
T KOG3628|consen 232 N--DFKGNYTKD-----KIK----KPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYG 298 (1363)
T ss_pred c--cccceeehh-----hcc----CCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhc
Confidence 0 000000000 000 0112222 7899999999999999999998 43322221
Q ss_pred ---hhhcCCCCCCEEEEecChhhhhhchh-hhHhHhcCcEeEEecC---CCHHHHHHHHHHhCCcEEechhHHHHHHH-c
Q 045072 221 ---LIDWSIPKQPVYLWTLPMFHANGWSY-PWGMAAVGGTNVCLRK---FDAAVIYKMIRQHGVTHMCGAPVVLNMIS-N 292 (556)
Q Consensus 221 ---~~~~~~~~~~~~~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~-~ 292 (556)
...++....+.++..+......|+.. .+-+++.|.|.+.+++ ..|..+.+++.+++++++..--..+.... +
T Consensus 299 ~~~~~v~~~~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~n 378 (1363)
T KOG3628|consen 299 CLHAHVFPVPSEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYN 378 (1363)
T ss_pred chhhhccccCcccceeeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCccccc
Confidence 11234456677777777777778765 6678899999998886 78899999999999999887654443321 1
Q ss_pred C---CC---------CCCCCCCeEEEEeCCCCcHHHHHHhH----h-cCC---e--EEecccccccccceee--------
Q 045072 293 L---PR---------SEPLRNPVHILTAGAPPPAAVLFRTE----S-LGF---L--VSHGYGLTETAGLVVS-------- 342 (556)
Q Consensus 293 ~---~~---------~~~l~~l~~v~~~g~~~~~~~~~~~~----~-~~~---~--l~~~yG~tE~~~~~~~-------- 342 (556)
+ ++ ..+++++|.+++....+..+..+... + +|. + .+.....-+.|++...
T Consensus 379 y~~~p~a~~s~~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~ 458 (1363)
T KOG3628|consen 379 YQEDPKATLSFKKYKTPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIG 458 (1363)
T ss_pred ccCCcccccchhhccCCCccceeeeEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhh
Confidence 1 11 35688999999999988877654432 1 221 1 2222222333333322
Q ss_pred -----cccccc---ccC--------------CChh--hhccccccCccccceeeeeEEecCCCCceecCCCCeeeEEEEe
Q 045072 343 -----CAWKNK---WNR--------------LPAT--ERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLGEIVFR 398 (556)
Q Consensus 343 -----~~~~~~---~~~--------------~~~~--~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~i~ 398 (556)
.+.... ... ...+ ......-.+|...++...+.|+++++...|..+ ++|||||.
T Consensus 459 ~~~~r~p~~~~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~--eVGEIwVs 536 (1363)
T KOG3628|consen 459 TVSIRRPEQMADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTD--EVGEIWVS 536 (1363)
T ss_pred cccccCcccccccCccceeeeccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccC--cceeEEEe
Confidence 111000 000 0000 011111234666666668889999888899888 89999999
Q ss_pred cCCccccccCCCCccccCcC------------CCCceecCceEEEecCCcEEEEccCCCeEe-eCcEeeChHHH------
Q 045072 399 GGSMMLGYLKDPNGTRKCMK------------DDGWFYTGDVGVIHADGYLEIKDRSKDVII-SGGENLSSVEV------ 459 (556)
Q Consensus 399 ~~~~~~gy~~~~~~~~~~~~------------~~~~~~TGD~~~~~~dg~l~~~GR~~d~i~-~~G~~v~~~~i------ 459 (556)
++++..+||.-+..+...|. +..|.|||-+|++. .|.+|++|-.+|++. ..|..++..+|
T Consensus 537 S~~~~~~~~al~~~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~-~gki~vl~~k~d~llq~~~~~h~~d~iv~thya 615 (1363)
T KOG3628|consen 537 SNSLGKLFYALDKQTENTFKATPVESSGKPPSNVPFMRTGLLGFVH-NGKIYVLGLKEDGLLQVSGWRHNADDIVATHYA 615 (1363)
T ss_pred cCCcccceeeccccccceEEeeeccccCCCCccchhhhhcceeeee-CCeEEEEEechhhhhhhhhhhhhhhhhHhhHHH
Confidence 99999999988776665552 12478999999998 666888887777776 78887766544
Q ss_pred ----HHHHhcCCCccccEEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCC-Ccccc---eeEEecCCCCC
Q 045072 460 ----ESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPR-YMVPK---TVVFKEELPKT 531 (556)
Q Consensus 460 ----e~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~-~~~p~---~~~~v~~lP~t 531 (556)
+-+.+..+.|.++.++- + +....+++-.+...+ .+.-+....+.+.+.. |.+-. .++.-+.||||
T Consensus 616 ~~~iktV~R~v~~VF~~saf~--~----E~~~Vv~~esP~a~e-~~~~q~~~~v~q~l~~iHqv~vyCilivP~~tLPrt 688 (1363)
T KOG3628|consen 616 VELIKTVMRGVIAVFDVSAFE--D----EHIVVVVLESPDATE-ENSFQWMSRVFQALDSIHQVGVYCILIVPANTLPRT 688 (1363)
T ss_pred HHHHHHHHhccceEEEEeeee--c----ceEEEEEEeCcchhh-hhhhhHHHHHHHHHHHHhcccceEEEEeccccCCCc
Confidence 33455567788888875 2 234444444443321 2222222222222221 22211 34445689999
Q ss_pred CCCCccHHHHHHHHHHhccc
Q 045072 532 STGKIKKFELREMAKAMGKS 551 (556)
Q Consensus 532 ~~GKv~r~~l~~~~~~~~~~ 551 (556)
+.|-+.-.++++.|.+....
T Consensus 689 ~~~Gi~~~~~k~~F~~G~L~ 708 (1363)
T KOG3628|consen 689 PLGGIHNNECKQAFLEGSLP 708 (1363)
T ss_pred cccccccHHHHHHHHcCCCC
Confidence 98889999999999876543
No 131
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.76 E-value=2.8e-16 Score=154.89 Aligned_cols=254 Identities=14% Similarity=0.075 Sum_probs=160.5
Q ss_pred CcEEEEeccCCCCCCceEEEchHHHHHHHhhhhh---hcCCCCCCEEEEecChhhhhhchhhhHhHhcCcE-eEEec-CC
Q 045072 189 DPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLI---DWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGT-NVCLR-KF 263 (556)
Q Consensus 189 ~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~-~~~~~-~~ 263 (556)
.-..+..||||||.|-.+..+............. ..++..++++.....- .+ .+...+..... +-..+ ..
T Consensus 100 ~~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~---~~--~ly~~~~~~~~~~~~~~l~~ 174 (430)
T TIGR02304 100 GNISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRA---DN--NLYQSVNNRWISLDFFDLLA 174 (430)
T ss_pred CcEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEcc---Ch--hHHHHHHhccceeeecCCCc
Confidence 4556778999999999999999866433322221 1244455554433211 00 11111111110 11111 25
Q ss_pred CHHHHHHHHHHhCCcEEechhHHHHHHHcCCCCCCC-CCCeEEEEeCCCCcHHHHHHhH-hcCCeEEeccccccccccee
Q 045072 264 DAAVIYKMIRQHGVTHMCGAPVVLNMISNLPRSEPL-RNPVHILTAGAPPPAAVLFRTE-SLGFLVSHGYGLTETAGLVV 341 (556)
Q Consensus 264 ~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l-~~l~~v~~~g~~~~~~~~~~~~-~~~~~l~~~yG~tE~~~~~~ 341 (556)
+.+.+++.|++++|+.+.++|+.+..|.+......+ .+++.++++||.++++.++.++ .+|+++++.||+|| |.+++
T Consensus 175 ~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~~~~k~ii~~~E~l~~~~r~~Ie~~fg~~V~~~YG~tE-g~la~ 253 (430)
T TIGR02304 175 PFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELTIKPKKVISVAEVLEPQDRELIRNVFKNTVHQIYQATE-GFLAS 253 (430)
T ss_pred CHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCCCCceEEEEccCCCCHHHHHHHHHHhCCCeeEccCCch-hheEE
Confidence 678999999999999999999999999876542221 4789999999999999999988 67999999999999 66666
Q ss_pred eccccccccCCChhhhccccccCccccceeeeeE--EecCCCCceecCCCCeeeEEEEecCCccccccCCCCccccCcCC
Q 045072 342 SCAWKNKWNRLPATERARMKSRQGVRTVCFTEID--VIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKD 419 (556)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~--i~d~~~~~~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~ 419 (556)
.|... .++.. .....++ ++|++ +. +..+|++-. + .....+
T Consensus 254 eC~~g-~lHl~----------------ed~~~vE~~ivD~~-~~---------~~~ViT~L~-------n--~~~PlI-- 295 (430)
T TIGR02304 254 TCRCG-TLHLN----------------EDLVHIEKQYLDEH-KR---------FVPIITDFT-------R--TTQPIV-- 295 (430)
T ss_pred ecCCC-CEEEc----------------cccEEEEeeEECCC-Cc---------eEEEEecCC-------C--ccceEE--
Confidence 55321 12111 1111344 78863 21 344665411 1 111111
Q ss_pred CCceecCceEEEecC----Cc----E-EEEccCCCeEee---CcEe--eChHHHHHH-HhcCCCccccEEEeecCCCCCe
Q 045072 420 DGWFYTGDVGVIHAD----GY----L-EIKDRSKDVIIS---GGEN--LSSVEVESV-LYTNPAVNEAAVVARPDEFWGE 484 (556)
Q Consensus 420 ~~~~~TGD~~~~~~d----g~----l-~~~GR~~d~i~~---~G~~--v~~~~ie~~-l~~~~~i~~~~v~~~~~~~~g~ 484 (556)
.|+|||++...++ |. + .+.||.+|++++ +|.. ++|..++.. +...++|.+.+++.....
T Consensus 296 --RYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q~~~~---- 369 (430)
T TIGR02304 296 --RYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRVLQTGSA---- 369 (430)
T ss_pred --eeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEEEEccCC----
Confidence 3999999987544 32 3 388999999984 4544 589999877 445789999988865432
Q ss_pred eeEEEEEe
Q 045072 485 TPCAFLSL 492 (556)
Q Consensus 485 ~~~~~v~~ 492 (556)
.+.+.++.
T Consensus 370 ~l~v~~~~ 377 (430)
T TIGR02304 370 QLELIADC 377 (430)
T ss_pred eEEEEEEe
Confidence 34444444
No 132
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=99.28 E-value=5.2e-12 Score=92.48 Aligned_cols=70 Identities=54% Similarity=0.820 Sum_probs=61.3
Q ss_pred HHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcCCCCccc--ceeEEecC-CCCCCCC
Q 045072 458 EVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVP--KTVVFKEE-LPKTSTG 534 (556)
Q Consensus 458 ~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l~~~~~p--~~~~~v~~-lP~t~~G 534 (556)
|||+.+.++|+|.+|+|++.+++.+|+.++++++. +.++|.++++++|++|+.| ..++.+++ ||+|++|
T Consensus 1 EIE~~l~~~~~V~~~~V~~~~d~~~g~~l~a~vv~--------~~~~i~~~~~~~l~~~~~P~~~~~v~~~~~lP~t~~G 72 (73)
T PF13193_consen 1 EIESVLRQHPGVAEAAVVGVPDEDWGERLVAFVVL--------DEEEIRDHLRDKLPPYMVPRRIRFVRLDEELPRTPSG 72 (73)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEE--------HHHHHHHHHHHHS-GGGS-SEEEEEEESSSEEBETTS
T ss_pred CHHHHHhcCCCccEEEEEEEEcccccccceeEEEe--------eecccccchhhhCCCcceeeEEEEccccCcCCCCCCC
Confidence 79999999999999999999999999999999988 2389999999999999999 45555677 9999999
Q ss_pred C
Q 045072 535 K 535 (556)
Q Consensus 535 K 535 (556)
|
T Consensus 73 K 73 (73)
T PF13193_consen 73 K 73 (73)
T ss_dssp S
T ss_pred C
Confidence 8
No 133
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.79 E-value=5.1e-07 Score=87.55 Aligned_cols=230 Identities=18% Similarity=0.202 Sum_probs=132.5
Q ss_pred CCCcEEEEeccCCCCCCceEEEchHHHHHHH---hhhhhhcC-CCCC-CEEEEecChhhhh-hch----hhhHhHhcCcE
Q 045072 187 EWDPMILNYTSGTTSSPKGVVHCHRGIFVMT---VDSLIDWS-IPKQ-PVYLWTLPMFHAN-GWS----YPWGMAAVGGT 256 (556)
Q Consensus 187 ~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~---~~~~~~~~-~~~~-~~~~~~~pl~~~~-g~~----~~~~~~~~g~~ 256 (556)
.+++..++.||||||.|--+.+.+..+..+. ......+. .... ..++...|-.... .+. ..+.....+ +
T Consensus 88 ~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~-~ 166 (365)
T PF04443_consen 88 EEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFG-S 166 (365)
T ss_pred hhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccC-c
Confidence 4467788999999999877777666554433 22222222 2222 2233333432211 111 112222223 3
Q ss_pred eEEecC--CCHHHHHHHHH----HhCCcEEechhHHHHHHHcCCC----CCCCCC-CeEEEEeC------CCCcHH-HHH
Q 045072 257 NVCLRK--FDAAVIYKMIR----QHGVTHMCGAPVVLNMISNLPR----SEPLRN-PVHILTAG------APPPAA-VLF 318 (556)
Q Consensus 257 ~~~~~~--~~~~~~~~~i~----~~~~t~~~~~p~~~~~l~~~~~----~~~l~~-l~~v~~~g------~~~~~~-~~~ 318 (556)
...+.. ++.+.+...+. +.++..+++.|.++-.++...+ ...++. .+.+-.|| +.++.+ ..+
T Consensus 167 ~~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef~~ 246 (365)
T PF04443_consen 167 RFALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEFYA 246 (365)
T ss_pred eeeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHHHH
Confidence 345543 56776666664 4578889998887666554333 223332 33333443 345543 444
Q ss_pred HhH-hcCC----eEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeEEecCCCCceecCCCCeee
Q 045072 319 RTE-SLGF----LVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEIDVIDSESGLSVSHDGASLG 393 (556)
Q Consensus 319 ~~~-~~~~----~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~G 393 (556)
.+. .+|+ .+++.||+||.....+.+.... ...|.+ +.|.|+++..+++.| +.|
T Consensus 247 ~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~~------------------~~~p~w--V~iRDp~tl~~~~~G--e~G 304 (365)
T PF04443_consen 247 RLQEVFGVIPIENIYDMYGMTELNSQAYECGHGH------------------FHVPPW--VIIRDPETLEPLPPG--ETG 304 (365)
T ss_pred HHHHHHCCCCHHHeeeeeeccccchhheeCCCCc------------------ccCCCe--EEEECCCCCcCCCCC--Cee
Confidence 555 4687 6999999999877665542110 122333 667799999999998 689
Q ss_pred EEEEecCCccccccCCCCccccCcCCCCceecCceEEEecC--------CcEEEEccCCCeEeeCcEee
Q 045072 394 EIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHAD--------GYLEIKDRSKDVIISGGENL 454 (556)
Q Consensus 394 el~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~d--------g~l~~~GR~~d~i~~~G~~v 454 (556)
-|-+-++... .| .+..-|.|+|.+..+ .++.++||.+. -.++|...
T Consensus 305 li~vidl~~~-s~-------------p~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~-ae~RGCs~ 358 (365)
T PF04443_consen 305 LIQVIDLANT-SY-------------PGFILTEDLGVLHGDDDCGCRKGKYFEVLGRADG-AEIRGCSL 358 (365)
T ss_pred EEEEEccccc-CC-------------CcEEEEcceeeecCCCCCCCccCCEEEEEeCCCC-CccCCcHH
Confidence 9988765322 11 445779999988654 26899999764 22445443
No 134
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.37 E-value=1.9e-05 Score=81.40 Aligned_cols=177 Identities=18% Similarity=0.138 Sum_probs=94.3
Q ss_pred CCCCeEEEEeCCCCcHHHHHHhHhc--C-CeEEecccccccccceeeccccccccCCChhhhccccccCccccceeeeeE
Q 045072 299 LRNPVHILTAGAPPPAAVLFRTESL--G-FLVSHGYGLTETAGLVVSCAWKNKWNRLPATERARMKSRQGVRTVCFTEID 375 (556)
Q Consensus 299 l~~l~~v~~~g~~~~~~~~~~~~~~--~-~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 375 (556)
.++++.+.+.+..-...-..++++. + ..+...|++||. .+...... ....+...+...-++
T Consensus 266 WP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg-~i~i~~~~---------------~~~~~~l~~~~~ffE 329 (528)
T PF03321_consen 266 WPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEG-FIGIPLDP---------------EDPGYVLAPDSGFFE 329 (528)
T ss_dssp STT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTE-EEEEES-C---------------CC--EEE-TTSSEEE
T ss_pred CCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccce-EEEEecCC---------------CCCceEeecCCeEEE
Confidence 5688877765554444444444422 2 457788999995 33333210 011122222222444
Q ss_pred EecCCC--------Cc-----eecCCCCeeeEEEEecCCccccccCCCCccccCcCCCCceecCceEEEec--CC--cEE
Q 045072 376 VIDSES--------GL-----SVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHA--DG--YLE 438 (556)
Q Consensus 376 i~d~~~--------~~-----~~~~~~~~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~--dg--~l~ 438 (556)
.++.++ .. ++..| +..||+|+.. .|.| .|+.||++++.. ++ .+.
T Consensus 330 Fip~~~~~~~~~~~~~~l~~~ele~G--~~YelviTt~---~GLy--------------RY~iGDvVrv~gf~~~~P~i~ 390 (528)
T PF03321_consen 330 FIPVDEDEQNPSEQPKTLLLHELEVG--EEYELVITTN---SGLY--------------RYRIGDVVRVTGFYNQTPRIE 390 (528)
T ss_dssp EEE-STT-------SSSEEGGG--TT---EEEEEEEST---TS-S--------------SEEECEEEEEEEEETTEEEEE
T ss_pred EEeccCCcccccCCCceecHHHhcCC--CeEEEEEecc---ccee--------------eeecCCEEEEeeccCCCcEEE
Confidence 444432 11 23334 5689999863 1222 299999999852 34 699
Q ss_pred EEccCCCeEeeCcEeeChHHHHHHHhcC-----CCccccEEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhcC
Q 045072 439 IKDRSKDVIISGGENLSSVEVESVLYTN-----PAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARL 513 (556)
Q Consensus 439 ~~GR~~d~i~~~G~~v~~~~ie~~l~~~-----~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~l 513 (556)
|+||.+.++.+.|++++-.+++.++.+. -.+.+..+...........-+.++++.... .+.+++.+.+.+.|
T Consensus 391 F~~R~~~~l~l~gEkl~e~~v~~av~~~~~~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~~~~~---~~~~~~~~~lD~~L 467 (528)
T PF03321_consen 391 FVGRRGQVLSLFGEKLSEEQVQEAVARALQETGLELRDFTVAPDPSSGNPPHYVLFWELEGEP---DDLEELAKALDESL 467 (528)
T ss_dssp EEEETTEEE-SSS--EEHHHHHHHHHHHHHCTT-EEEEEEEEEE--SSSSBEEEEEEEECS-H---HHHHHHHHHHHHCS
T ss_pred EeccCCceeecceeecCHHHHHHHHHHHHHhcCCceeeEEEEeecccCCCCceEEEEEeCCCc---hHHHHHHHHHHHHh
Confidence 9999999999999999999999988874 334566666553222233445566665542 24445566665555
No 135
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.71 E-value=0.007 Score=62.37 Aligned_cols=44 Identities=9% Similarity=0.178 Sum_probs=37.9
Q ss_pred eecCceEEEe----cCCcEEEEccCCCeEeeCcEeeChHHHHHHHhcC
Q 045072 423 FYTGDVGVIH----ADGYLEIKDRSKDVIISGGENLSSVEVESVLYTN 466 (556)
Q Consensus 423 ~~TGD~~~~~----~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~ 466 (556)
||.||+.++. .--.+.|++|.+....+.|+|.+-.++..++.+.
T Consensus 417 YrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~a 464 (606)
T PLN02247 417 YRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQA 464 (606)
T ss_pred EecCCEEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHHHH
Confidence 8899999974 3356999999999889999999999998887763
No 136
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=97.61 E-value=0.0034 Score=65.13 Aligned_cols=43 Identities=7% Similarity=0.164 Sum_probs=38.1
Q ss_pred eecCceEEEecC----CcEEEEccCCCeEeeCcEeeChHHHHHHHhc
Q 045072 423 FYTGDVGVIHAD----GYLEIKDRSKDVIISGGENLSSVEVESVLYT 465 (556)
Q Consensus 423 ~~TGD~~~~~~d----g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~ 465 (556)
|+.||++++..- -.|.|+||.+.++.+.|++++-.+++.++.+
T Consensus 410 Y~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 410 YRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVEN 456 (597)
T ss_pred eecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHHHHH
Confidence 889999998632 4689999999999999999999999988877
No 137
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=97.55 E-value=0.00012 Score=56.48 Aligned_cols=84 Identities=24% Similarity=0.290 Sum_probs=49.8
Q ss_pred cEeeChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEecccccC-----CCCHHHHHHHHHhcCCCCcccceeEEe
Q 045072 451 GENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEK-----KPTEKEIIEYCRARLPRYMVPKTVVFK 525 (556)
Q Consensus 451 G~~v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~-----~~~~~~i~~~l~~~l~~~~~p~~~~~v 525 (556)
|.+|+|.+||++|.++|++...+.+....+...+.+.+.|+..++... ....+++.+.+++.+. +...+.++
T Consensus 1 GvnvfP~~Ie~vl~~~~~~~~~y~i~v~~~~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~~lg---v~~~V~lv 77 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPEVSPEYQIVVTREGGLDELTVRVELRPGFSDDAEDLEALAERIAERLKERLG---VRPEVELV 77 (96)
T ss_dssp TEEE-HHHHHHHHCTSTTEEEEEEEEEEEETTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHHHHHHHS---S-EEEEEE
T ss_pred CcEECHHHHHHHHHhCcCCCCcEEEEEEcCCCCcEEEEEEEECCccCcchHHHHHHHHHHHHHHHhhcC---ceEEEEEE
Confidence 789999999999999999994444444444445667777888776431 1123455555555542 22245555
Q ss_pred --cCCCCCCCCCccH
Q 045072 526 --EELPKTSTGKIKK 538 (556)
Q Consensus 526 --~~lP~t~~GKv~r 538 (556)
.+|||+ .||..|
T Consensus 78 ~~gtLpr~-~~K~~R 91 (96)
T PF14535_consen 78 PPGTLPRS-EGKAKR 91 (96)
T ss_dssp -TT-S----SSSS-S
T ss_pred CCCCccCC-CCcceE
Confidence 479998 588766
No 138
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.29 E-value=0.018 Score=59.36 Aligned_cols=43 Identities=16% Similarity=0.220 Sum_probs=37.2
Q ss_pred eecCceEEEe----cCCcEEEEccCCCeEeeCcEeeChHHHHHHHhc
Q 045072 423 FYTGDVGVIH----ADGYLEIKDRSKDVIISGGENLSSVEVESVLYT 465 (556)
Q Consensus 423 ~~TGD~~~~~----~dg~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~ 465 (556)
||.||+.++. ..-.+.|++|.+-...+.|+|.+-.++..++.+
T Consensus 423 YrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~ 469 (612)
T PLN02620 423 YRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKN 469 (612)
T ss_pred EecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHHHHHH
Confidence 8899999975 234699999999988999999999999887775
No 139
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=95.64 E-value=0.11 Score=51.16 Aligned_cols=93 Identities=18% Similarity=0.076 Sum_probs=76.6
Q ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHH--HHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEE
Q 045072 39 IYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPA--MYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVL 116 (556)
Q Consensus 39 ~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 116 (556)
.+|+.+....+..+|+.|...|..+||+|.+...-+.. -+...+|+.++|+.++|+.+.. .+.-..++++.++.++.
T Consensus 109 ~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g~-~~~~~~l~~df~~tvI~ 187 (438)
T COG1541 109 GYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGGN-TERQLELMKDFKPTVIA 187 (438)
T ss_pred ecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCcc-HHHHHHHHHhcCCcEEE
Confidence 49999999999999999999999999999887662221 1678899999999999998843 44556789999999999
Q ss_pred EeccchhhHHHHHhcC
Q 045072 117 VDYQSRNLVVEAISLF 132 (556)
Q Consensus 117 ~~~~~~~~~~~~~~~~ 132 (556)
+++.....+.+.....
T Consensus 188 ~tps~~l~lae~~~~~ 203 (438)
T COG1541 188 ATPSYLLYLAEEAEEE 203 (438)
T ss_pred EChHHHHHHHHHHHHc
Confidence 9998877776665554
No 140
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=87.48 E-value=4.3 Score=41.45 Aligned_cols=83 Identities=14% Similarity=0.086 Sum_probs=63.5
Q ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHH--HHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEE
Q 045072 39 IYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPA--MYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVL 116 (556)
Q Consensus 39 ~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 116 (556)
-+|..++...+...+..+...|+.+||++.++.+.+.. .....+|+..+|+..++... ......++++.++.+++
T Consensus 105 ~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l~ 181 (445)
T TIGR03335 105 FLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGIV 181 (445)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEEE
Confidence 38999999988888988888999999999998776543 23456788899998876543 23456788999999888
Q ss_pred Eeccchhh
Q 045072 117 VDYQSRNL 124 (556)
Q Consensus 117 ~~~~~~~~ 124 (556)
........
T Consensus 182 ~~ps~ll~ 189 (445)
T TIGR03335 182 ASVFKLLR 189 (445)
T ss_pred ECHHHHHH
Confidence 76654433
No 141
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=87.42 E-value=4 Score=41.37 Aligned_cols=89 Identities=16% Similarity=0.116 Sum_probs=68.1
Q ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChH--HHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEE
Q 045072 39 IYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIP--AMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVL 116 (556)
Q Consensus 39 ~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 116 (556)
.+|..++......++..+...|+++||++....+.+. ......+++..+|+..+++++.. .+.+...+++.++++++
T Consensus 94 ~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l~ 172 (422)
T TIGR02155 94 GYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDIIM 172 (422)
T ss_pred ccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEEE
Confidence 3788888777777788888889999999887665432 22334677889999999887654 57788999999999999
Q ss_pred EeccchhhHHHH
Q 045072 117 VDYQSRNLVVEA 128 (556)
Q Consensus 117 ~~~~~~~~~~~~ 128 (556)
..+.....+.+.
T Consensus 173 ~~Ps~l~~L~~~ 184 (422)
T TIGR02155 173 VTPSYMLNLLEE 184 (422)
T ss_pred EcHHHHHHHHHH
Confidence 988776655443
No 142
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=79.90 E-value=17 Score=37.79 Aligned_cols=86 Identities=15% Similarity=0.134 Sum_probs=64.8
Q ss_pred ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHH--HHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEE
Q 045072 38 LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPA--MYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLV 115 (556)
Q Consensus 38 ~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 115 (556)
-.+|+..+...+..+... .+++++|++...+|.... +...+++++..|+.+++. +..+.+.+...+++.++.++
T Consensus 184 v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~ 259 (513)
T PRK07656 184 AMLTHRQLLSNAADWAEY---LGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL-PVFDPDEVFRLIETERITVL 259 (513)
T ss_pred EEEecHHHHHHHHHHHHh---hCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-CcCCHHHHHHHHHHhCCeEE
Confidence 358888887666554433 478899999888876543 355678999999988775 56788999999999999999
Q ss_pred EEeccchhhHHH
Q 045072 116 LVDYQSRNLVVE 127 (556)
Q Consensus 116 i~~~~~~~~~~~ 127 (556)
+........+..
T Consensus 260 ~~~p~~~~~l~~ 271 (513)
T PRK07656 260 PGPPTMYNSLLQ 271 (513)
T ss_pred echHHHHHHHHc
Confidence 887776655443
No 143
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=78.04 E-value=13 Score=33.90 Aligned_cols=55 Identities=16% Similarity=0.166 Sum_probs=44.8
Q ss_pred HHcCCCCCCEEEEEcCChH--HHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCe
Q 045072 57 SSIGITRGHVVSVVAPNIP--AMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESK 113 (556)
Q Consensus 57 ~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 113 (556)
...|+.++|++. .+|-.. -+...+++++..|+..+.+ ++.+++++...+++.+++
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERVT 227 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcCC
Confidence 557899999999 887654 3445789999999998888 689999999988887753
No 144
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=75.15 E-value=23 Score=36.84 Aligned_cols=85 Identities=11% Similarity=0.182 Sum_probs=63.9
Q ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHH-HHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEE
Q 045072 39 IYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAM-YEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLV 117 (556)
Q Consensus 39 ~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 117 (556)
.+|+..+...+..... ..+++++|++....|..... ....++++..|+..+..+. .+.+.+...+++.++..+++
T Consensus 186 ~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~l~~ 261 (521)
T PRK06187 186 VLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRR-FDPENLLDLIETERVTFFFA 261 (521)
T ss_pred EeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCC-CCHHHHHHHHHHhCCeEEEc
Confidence 4788888866665544 45789999998888765433 3344568889999887765 48899999999999999999
Q ss_pred eccchhhHHH
Q 045072 118 DYQSRNLVVE 127 (556)
Q Consensus 118 ~~~~~~~~~~ 127 (556)
.......+..
T Consensus 262 ~p~~~~~l~~ 271 (521)
T PRK06187 262 VPTIWQMLLK 271 (521)
T ss_pred hHHHHHHHHc
Confidence 8776655443
No 145
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=70.99 E-value=61 Score=34.02 Aligned_cols=98 Identities=8% Similarity=0.019 Sum_probs=68.6
Q ss_pred cCCCCEEEECC---------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHH--HHHHHHHhhhccceEeccC
Q 045072 27 YGDCPSIIYNN---------LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPA--MYEAHFAIPFTGAILNNIN 95 (556)
Q Consensus 27 ~p~~~a~~~~~---------~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~ 95 (556)
.++.+|++... -.+|++.+...+.... ...++.++|++...+|-... +...++..+..|+..+...
T Consensus 181 ~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~ 257 (539)
T PRK06334 181 DPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACL---KFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAY 257 (539)
T ss_pred CcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHH---HhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEec
Confidence 35667766531 4589888876544433 34578889998888775432 2334567778898877665
Q ss_pred CCCCHHHHHHHHhccCCeEEEEeccchhhHHH
Q 045072 96 TRLDARTISVLLQHSESKLVLVDYQSRNLVVE 127 (556)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 127 (556)
...+.+.+...+++.++..+...+.....+..
T Consensus 258 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 289 (539)
T PRK06334 258 NPLYPKKIVEMIDEAKVTFLGSTPVFFDYILK 289 (539)
T ss_pred CCCCHHHHHHHHHHhCCcEEEecHHHHHHHHH
Confidence 55778999999999999999988877665544
No 146
>PRK08315 AMP-binding domain protein; Validated
Probab=66.91 E-value=48 Score=34.88 Aligned_cols=83 Identities=10% Similarity=0.013 Sum_probs=61.9
Q ss_pred ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCh--HHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEE
Q 045072 38 LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNI--PAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLV 115 (556)
Q Consensus 38 ~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 115 (556)
-.+|+..+...+..+... .+++++|++....|-. ..++..+++.+..|+..+......++..+...+++.+++.+
T Consensus 217 v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~ 293 (559)
T PRK08315 217 ATLTHRNILNNGYFIGEA---MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTAL 293 (559)
T ss_pred EEeeHHHHHHHHHHHHHh---cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEE
Confidence 357888876655544433 4789999998887753 34456678889999888866666788889999999999998
Q ss_pred EEeccchh
Q 045072 116 LVDYQSRN 123 (556)
Q Consensus 116 i~~~~~~~ 123 (556)
+.......
T Consensus 294 ~~~P~~~~ 301 (559)
T PRK08315 294 YGVPTMFI 301 (559)
T ss_pred ecchHHHH
Confidence 88776543
No 147
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=66.58 E-value=32 Score=28.33 Aligned_cols=102 Identities=11% Similarity=-0.005 Sum_probs=59.4
Q ss_pred CCEEEEecCh-hhhhhchhhhHh-HhcCcEeEEec-CCCHHHHHHHHHHhCCcEEechhH------HHHHHHcCCCCCCC
Q 045072 229 QPVYLWTLPM-FHANGWSYPWGM-AAVGGTNVCLR-KFDAAVIYKMIRQHGVTHMCGAPV------VLNMISNLPRSEPL 299 (556)
Q Consensus 229 ~~~~~~~~pl-~~~~g~~~~~~~-~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~------~~~~l~~~~~~~~l 299 (556)
..+++.+.+- .|..|...+... -..|-.++.+- ...++++.+.+.+++++++..+-. .+..+.+..+...+
T Consensus 4 ~~vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~ 83 (137)
T PRK02261 4 KTVVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGL 83 (137)
T ss_pred CEEEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCC
Confidence 3445555554 677776553333 35666666665 468899999999999999876532 12222222222334
Q ss_pred CCCeEEEEeCCCC-----cHHHHHHhHhcCCeEEecccc
Q 045072 300 RNPVHILTAGAPP-----PAAVLFRTESLGFLVSHGYGL 333 (556)
Q Consensus 300 ~~l~~v~~~g~~~-----~~~~~~~~~~~~~~l~~~yG~ 333 (556)
+.+ .+++||... +.+..+++++.| +-..|+.
T Consensus 84 ~~~-~i~vGG~~~~~~~~~~~~~~~l~~~G--~~~vf~~ 119 (137)
T PRK02261 84 GDI-LLYVGGNLVVGKHDFEEVEKKFKEMG--FDRVFPP 119 (137)
T ss_pred CCC-eEEEECCCCCCccChHHHHHHHHHcC--CCEEECc
Confidence 444 567777653 344556677766 3445553
No 148
>PLN02736 long-chain acyl-CoA synthetase
Probab=64.26 E-value=1.2e+02 Score=32.74 Aligned_cols=100 Identities=12% Similarity=0.012 Sum_probs=70.9
Q ss_pred EEEchHHHHHHHhhh---hhhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEec-CCCHHHHHHHHHHhCCcEEe
Q 045072 206 VVHCHRGIFVMTVDS---LIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLR-KFDAAVIYKMIRQHGVTHMC 281 (556)
Q Consensus 206 v~~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 281 (556)
..+|.+.+....... ....+++++|++...++-...+ ....+++...|+..+.+. ..+++++...+++.++++++
T Consensus 77 ~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~ 155 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEW-LIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIF 155 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEE
Confidence 457888776554443 3446899999998888765442 234567778888888775 47889999999999999999
Q ss_pred chhHHHHHHHcCCCCCCCCCCeEEEEe
Q 045072 282 GAPVVLNMISNLPRSEPLRNPVHILTA 308 (556)
Q Consensus 282 ~~p~~~~~l~~~~~~~~l~~l~~v~~~ 308 (556)
+.+..+..+.... ..++.++.++..
T Consensus 156 ~~~~~~~~~~~~~--~~~~~l~~ii~~ 180 (651)
T PLN02736 156 CVPQTLNTLLSCL--SEIPSVRLIVVV 180 (651)
T ss_pred ECHHHHHHHHHHh--hcCCCceEEEEE
Confidence 9988777665432 234456666654
No 149
>PLN02565 cysteine synthase
Probab=64.18 E-value=73 Score=30.81 Aligned_cols=73 Identities=15% Similarity=0.069 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHcCC-CCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEecc
Q 045072 48 RCLQLASSLSSIGI-TRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQ 120 (556)
Q Consensus 48 ~~~~la~~L~~~g~-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 120 (556)
-+..+-..+.+.|. .+|....+-...+-.-+...++|..+|..+..+-|...+......++..++++++++..
T Consensus 49 ~A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 122 (322)
T PLN02565 49 IGYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDPA 122 (322)
T ss_pred HHHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCCC
Confidence 34444444445564 78866556666677777777888889998888777777788889999999999998864
No 150
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=63.59 E-value=52 Score=32.94 Aligned_cols=88 Identities=11% Similarity=0.027 Sum_probs=63.7
Q ss_pred CCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhh---hhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecC
Q 045072 186 NEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSL---IDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRK 262 (556)
Q Consensus 186 ~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~ 262 (556)
.++.+|++. -..-.+|++.+...+.... ...+++.++++....+-.. ..+...++++..|+..+.+++
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~-~~~~~~~A~~~~G~~~v~l~~ 78 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSI-EFVVAFLACLRAGAIPVPLDP 78 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSH-HHHHHHHHHHHTT-EEEEEET
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccc-eeeeeeccccccccccccccc
Confidence 355666655 2345678888865544433 3457889999888887753 335567788888999888864
Q ss_pred -CCHHHHHHHHHHhCCcEEec
Q 045072 263 -FDAAVIYKMIRQHGVTHMCG 282 (556)
Q Consensus 263 -~~~~~~~~~i~~~~~t~~~~ 282 (556)
....++...+++.+++++++
T Consensus 79 ~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 79 SLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp TSSHHHHHHHHHHHTESEEEE
T ss_pred ccccccccccccccceeEEEE
Confidence 78899999999999999996
No 151
>PRK12583 acyl-CoA synthetase; Provisional
Probab=63.55 E-value=58 Score=34.22 Aligned_cols=82 Identities=16% Similarity=0.071 Sum_probs=61.0
Q ss_pred ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCh--HHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEE
Q 045072 38 LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNI--PAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLV 115 (556)
Q Consensus 38 ~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 115 (556)
..+|++.+...+..+... .+++++|++....|-. ..++..+++++..|+..+......+...+...+++.+++.+
T Consensus 219 v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l 295 (558)
T PRK12583 219 ATLSHHNILNNGYFVAES---LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTAL 295 (558)
T ss_pred EEeeHHHHHHHHHHHHHH---hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEE
Confidence 358888886665554443 4788999988777643 44566678888899888754556778888899999999998
Q ss_pred EEeccch
Q 045072 116 LVDYQSR 122 (556)
Q Consensus 116 i~~~~~~ 122 (556)
+..+...
T Consensus 296 ~~~P~~~ 302 (558)
T PRK12583 296 YGVPTMF 302 (558)
T ss_pred eccHHHH
Confidence 8777654
No 152
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=62.69 E-value=76 Score=29.53 Aligned_cols=80 Identities=11% Similarity=0.150 Sum_probs=52.2
Q ss_pred ccHHHHHH-HHHHHHHHHHHcC-CCCCCEEEEEcCChHHHHHHHHHhhhc------c--ceEeccCCCC---CHHHHHHH
Q 045072 40 YTWSQTHR-RCLQLASSLSSIG-ITRGHVVSVVAPNIPAMYEAHFAIPFT------G--AILNNINTRL---DARTISVL 106 (556)
Q Consensus 40 ~Ty~~l~~-~~~~la~~L~~~g-~~~gd~V~i~~~~~~~~~~~~lA~~~~------G--~~~v~l~~~~---~~~~l~~~ 106 (556)
+++..+.+ -.+++.+.+.+.+ +.+|++|+|..+-+.|+++++..+..+ | ..++.++... +.+.+..+
T Consensus 3 ~~~~~~~~~~~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~ 82 (258)
T PRK10696 3 YEFNKLQKRLRRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEY 82 (258)
T ss_pred cchhHHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHH
Confidence 34444554 3455666677754 588999999999999998887666442 2 4555566543 34445666
Q ss_pred HhccCCeEEEEec
Q 045072 107 LQHSESKLVLVDY 119 (556)
Q Consensus 107 l~~~~~~~vi~~~ 119 (556)
.++.+..+.+.+.
T Consensus 83 ~~~lgI~~~v~~~ 95 (258)
T PRK10696 83 LESLGVPYHIEEQ 95 (258)
T ss_pred HHHhCCCEEEEEe
Confidence 6777777666543
No 153
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=60.13 E-value=52 Score=34.12 Aligned_cols=85 Identities=11% Similarity=-0.013 Sum_probs=64.6
Q ss_pred ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHH-HHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEE
Q 045072 38 LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPA-MYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVL 116 (556)
Q Consensus 38 ~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 116 (556)
..+|...+...+..+...+ ++.+||++...+|-... .+..+++++..|+..+.. +..+.+.+...+++.++.++.
T Consensus 179 v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 254 (515)
T TIGR03098 179 VVLSHRNLVAGAQSVATYL---ENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLH-DYLLPRDVLKALEKHGITGLA 254 (515)
T ss_pred EEEecHHHHHHHHHHHHHh---CCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEc-CCCCHHHHHHHHHHcCCceEe
Confidence 4588888887766665443 67889999888876543 345678889999998865 557889999999999999999
Q ss_pred EeccchhhHH
Q 045072 117 VDYQSRNLVV 126 (556)
Q Consensus 117 ~~~~~~~~~~ 126 (556)
..+.....+.
T Consensus 255 ~~P~~~~~l~ 264 (515)
T TIGR03098 255 AVPPLWAQLA 264 (515)
T ss_pred cChHHHHHHH
Confidence 8887655443
No 154
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=58.21 E-value=1.1e+02 Score=28.81 Aligned_cols=99 Identities=20% Similarity=0.236 Sum_probs=60.9
Q ss_pred ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCC----CHHHHHHHHhccCCe
Q 045072 38 LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRL----DARTISVLLQHSESK 113 (556)
Q Consensus 38 ~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~----~~~~l~~~l~~~~~~ 113 (556)
..+-.+-+. ++..||..|++. |..|..++.......... +...|..+..++-.. ..+++..+++..+++
T Consensus 10 ~~iG~GHv~-Rcl~LA~~l~~~----g~~v~f~~~~~~~~~~~~--i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d 82 (279)
T TIGR03590 10 SEIGLGHVM-RCLTLARALHAQ----GAEVAFACKPLPGDLIDL--LLSAGFPVYELPDESSRYDDALELINLLEEEKFD 82 (279)
T ss_pred ccccccHHH-HHHHHHHHHHHC----CCEEEEEeCCCCHHHHHH--HHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCC
Confidence 344444443 467889999765 447777777665554433 357787777664432 345688899999999
Q ss_pred EEEEeccc-hhhHHHHHhcCCCCCCCCCeEEEcCCC
Q 045072 114 LVLVDYQS-RNLVVEAISLFPSDIKCPPLVLIADHT 148 (556)
Q Consensus 114 ~vi~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (556)
++++|.-. ........+.. .+++++++|..
T Consensus 83 ~vV~D~y~~~~~~~~~~k~~-----~~~l~~iDD~~ 113 (279)
T TIGR03590 83 ILIVDHYGLDADWEKLIKEF-----GRKILVIDDLA 113 (279)
T ss_pred EEEEcCCCCCHHHHHHHHHh-----CCeEEEEecCC
Confidence 99998732 22333333221 45667776653
No 155
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=57.11 E-value=89 Score=31.06 Aligned_cols=98 Identities=16% Similarity=0.083 Sum_probs=72.2
Q ss_pred CCCCEEEEC--C-------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHH-HHHHHHHhhhccceEeccCCC
Q 045072 28 GDCPSIIYN--N-------LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPA-MYEAHFAIPFTGAILNNINTR 97 (556)
Q Consensus 28 p~~~a~~~~--~-------~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~ 97 (556)
++.++++.. + ..+|++.+...+..+.. ..+++++|++....|.+.. .+..+++.+..|+..+..++.
T Consensus 119 ~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~ 195 (408)
T TIGR01733 119 PDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLAR---RYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPED 195 (408)
T ss_pred CCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChh
Confidence 466666652 1 44788888777666655 3467789998888776544 456678888899888877665
Q ss_pred CC--HHHHHHHHhccCCeEEEEeccchhhHHHH
Q 045072 98 LD--ARTISVLLQHSESKLVLVDYQSRNLVVEA 128 (556)
Q Consensus 98 ~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 128 (556)
.. ...+..+++..+++.+++.......+...
T Consensus 196 ~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~ 228 (408)
T TIGR01733 196 EERDAALLAALIAEHPVTVLNLTPSLLALLAAA 228 (408)
T ss_pred hccCHHHHHHHHHHcCceEEEeCHHHHHHHHHh
Confidence 54 68889999999999999988877766554
No 156
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=56.96 E-value=66 Score=30.69 Aligned_cols=75 Identities=12% Similarity=0.168 Sum_probs=58.6
Q ss_pred HHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHhcC
Q 045072 55 SLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAISLF 132 (556)
Q Consensus 55 ~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~ 132 (556)
-|.+.|+.+|++|+|..--+.-.+...+|.++ |..+..++... ..-+..++..++...+...+..+...+..+.+
T Consensus 173 pLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAM-G~rV~vis~~~--~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~ 247 (360)
T KOG0023|consen 173 PLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAM-GMRVTVISTSS--KKKEEAIKSLGADVFVDSTEDPDIMKAIMKTT 247 (360)
T ss_pred hhHHcCCCCCcEEEEecCcccchHHHHHHHHh-CcEEEEEeCCc--hhHHHHHHhcCcceeEEecCCHHHHHHHHHhh
Confidence 47788999999999999888999999999775 77777787654 23446788999999888776666666665544
No 157
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=55.14 E-value=40 Score=34.06 Aligned_cols=82 Identities=12% Similarity=0.087 Sum_probs=61.3
Q ss_pred ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHH-HHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEE
Q 045072 38 LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPA-MYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVL 116 (556)
Q Consensus 38 ~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 116 (556)
-.+|++.+...+..++..+ +++++|++...+|-... .+..+++++..|+..+..++. +.+...+++.++.++.
T Consensus 129 v~~s~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~~ 202 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKENL---GFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHIS 202 (436)
T ss_pred EEEehHHHHHHHHHHHhhc---CCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEEE
Confidence 3589999888777666544 78999999887775432 234568889999998877543 4888899999999998
Q ss_pred EeccchhhH
Q 045072 117 VDYQSRNLV 125 (556)
Q Consensus 117 ~~~~~~~~~ 125 (556)
........+
T Consensus 203 ~~P~~l~~l 211 (436)
T TIGR01923 203 LVPTQLNRL 211 (436)
T ss_pred eHHHHHHHH
Confidence 877655443
No 158
>PRK11761 cysM cysteine synthase B; Provisional
Probab=54.77 E-value=1.2e+02 Score=28.94 Aligned_cols=87 Identities=13% Similarity=0.054 Sum_probs=57.9
Q ss_pred CCEEEECC--ccccHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHH
Q 045072 30 CPSIIYNN--LIYTWSQTHRRCLQLASSLSSIG-ITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVL 106 (556)
Q Consensus 30 ~~a~~~~~--~~~Ty~~l~~~~~~la~~L~~~g-~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 106 (556)
++.+-..+ ..-||++ +.+..+...+.+.| +.+|+.|.. ...+-.-....++|...|..+..+-|...+......
T Consensus 28 ~i~~K~E~~nptGS~K~--R~a~~~~~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~ 104 (296)
T PRK11761 28 TILAKLEGNNPAGSVKD--RPALSMIVQAEKRGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAA 104 (296)
T ss_pred EEEEEEcccCCCCCchh--HHHHHHHHHHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 44444443 3334444 33444444455556 477776544 555666677777888899888877776666677889
Q ss_pred HhccCCeEEEEec
Q 045072 107 LQHSESKLVLVDY 119 (556)
Q Consensus 107 l~~~~~~~vi~~~ 119 (556)
++..++++++++.
T Consensus 105 ~~~~GA~v~~~~~ 117 (296)
T PRK11761 105 MRAYGAELILVPK 117 (296)
T ss_pred HHHcCCEEEEeCC
Confidence 9999999999986
No 159
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=54.23 E-value=95 Score=32.81 Aligned_cols=96 Identities=9% Similarity=-0.024 Sum_probs=67.0
Q ss_pred CCCCEEEEC--C-------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHH--HHHHHHHhhhccceEeccCC
Q 045072 28 GDCPSIIYN--N-------LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPA--MYEAHFAIPFTGAILNNINT 96 (556)
Q Consensus 28 p~~~a~~~~--~-------~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~ 96 (556)
++.++++.. | -.+|++.+...+... ....++.++|++....+.... ....+++.+..|+..+....
T Consensus 204 ~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~ 280 (570)
T PRK04319 204 REDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTG---KYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGG 280 (570)
T ss_pred CCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHH---HHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECC
Confidence 455666642 1 347888776544332 334578889987666654433 24557788899998887776
Q ss_pred CCCHHHHHHHHhccCCeEEEEeccchhhHH
Q 045072 97 RLDARTISVLLQHSESKLVLVDYQSRNLVV 126 (556)
Q Consensus 97 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 126 (556)
..+++.+...+++.++++++..+.....+.
T Consensus 281 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 310 (570)
T PRK04319 281 RFSPERWYRILEDYKVTVWYTAPTAIRMLM 310 (570)
T ss_pred CCCHHHHHHHHHHcCCeEEEeCHHHHHHHH
Confidence 778999999999999999998877665543
No 160
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=52.76 E-value=51 Score=32.51 Aligned_cols=65 Identities=18% Similarity=0.196 Sum_probs=47.8
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCC-----CCCHHHHHHHHhccCCeEEEE
Q 045072 49 CLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINT-----RLDARTISVLLQHSESKLVLV 117 (556)
Q Consensus 49 ~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~~~~~~vi~ 117 (556)
+..+.-.|+..++++||-|.+ .+.-|+.+.=+++..|+.+|.+|- +.+.+.++..+..- .++|+.
T Consensus 59 T~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIip 128 (374)
T COG0399 59 TAALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIP 128 (374)
T ss_pred HHHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEE
Confidence 455556677778999994433 356788888899999999998864 45788898888774 455443
No 161
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=52.65 E-value=1.4e+02 Score=28.38 Aligned_cols=91 Identities=14% Similarity=0.012 Sum_probs=56.9
Q ss_pred CCEEEECCccccHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHh
Q 045072 30 CPSIIYNNLIYTWSQTHRRCLQLASSLSSIG-ITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQ 108 (556)
Q Consensus 30 ~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g-~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~ 108 (556)
++.+-.++..-|-.-=.+.+..+.....+.| +.+|++| +....+-.-....+++.++|..+..+-|....+.....++
T Consensus 22 ~i~~K~E~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~ 100 (298)
T TIGR01139 22 NVFVKLEGRNPSGSVKDRIALNMIWDAEKRGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLK 100 (298)
T ss_pred eEEEEEcccCCCCcchHHHHHHHHHHHHHcCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHH
Confidence 4444444433332222223333333444556 4777776 5555566666666777889988887777665566678899
Q ss_pred ccCCeEEEEeccc
Q 045072 109 HSESKLVLVDYQS 121 (556)
Q Consensus 109 ~~~~~~vi~~~~~ 121 (556)
..++.+++++...
T Consensus 101 ~~GA~v~~~~~~~ 113 (298)
T TIGR01139 101 AYGAELVLTPGAE 113 (298)
T ss_pred HcCCEEEEECCCC
Confidence 9999999997753
No 162
>PLN03051 acyl-activating enzyme; Provisional
Probab=52.09 E-value=69 Score=33.18 Aligned_cols=85 Identities=13% Similarity=-0.033 Sum_probs=58.9
Q ss_pred ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHH-HHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEE
Q 045072 38 LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPA-MYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVL 116 (556)
Q Consensus 38 ~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 116 (556)
-.+|.+.+...+... ....++.++|++...+|-+.. .+..+++++..|+..+..+.....+.+...+++.++.++.
T Consensus 137 V~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~ 213 (499)
T PLN03051 137 IPWTHLSPLRCASDG---WAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLG 213 (499)
T ss_pred EEEccchHHHHHHHH---HHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEE
Confidence 347777665543322 234578889988776664332 2345678889999988776545678899999999999999
Q ss_pred EeccchhhH
Q 045072 117 VDYQSRNLV 125 (556)
Q Consensus 117 ~~~~~~~~~ 125 (556)
..+.....+
T Consensus 214 ~vP~~~~~l 222 (499)
T PLN03051 214 LVPSIVKAW 222 (499)
T ss_pred eCHHHHHHH
Confidence 877665544
No 163
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=51.17 E-value=94 Score=31.50 Aligned_cols=104 Identities=14% Similarity=0.112 Sum_probs=71.1
Q ss_pred eEEEchHHHHHHH---hhhhhhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecC-CCHHHHHHHHHHhCCcEE
Q 045072 205 GVVHCHRGIFVMT---VDSLIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRK-FDAAVIYKMIRQHGVTHM 280 (556)
Q Consensus 205 ~v~~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~~ 280 (556)
++..|.+.++..+ +.....++++.+|++..+-|-+... ..+.+++...|...+.+.+ ....++.=.+++.++-.+
T Consensus 75 g~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w-~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l 153 (596)
T KOG1177|consen 75 GIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEW-VLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKAL 153 (596)
T ss_pred cchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHH-HHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEEE
Confidence 4456777775543 3444457999999999998886543 2234566677777766654 445778888999999999
Q ss_pred echhHHH-----HHHHcCCC-----------CCCCCCCeEEEEeC
Q 045072 281 CGAPVVL-----NMISNLPR-----------SEPLRNPVHILTAG 309 (556)
Q Consensus 281 ~~~p~~~-----~~l~~~~~-----------~~~l~~l~~v~~~g 309 (556)
+..|.+. +.+.+... ...++.++.++..+
T Consensus 154 ~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ 198 (596)
T KOG1177|consen 154 FAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILAD 198 (596)
T ss_pred EccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecC
Confidence 9998753 33433332 34577888988877
No 164
>PLN03013 cysteine synthase
Probab=50.87 E-value=1.5e+02 Score=30.02 Aligned_cols=65 Identities=23% Similarity=0.113 Sum_probs=50.6
Q ss_pred HHHcC-CCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEecc
Q 045072 56 LSSIG-ITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQ 120 (556)
Q Consensus 56 L~~~g-~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 120 (556)
+.+.| +++|....|-...+-.-+...++|...|..+..+-|....++....++..++.+++++..
T Consensus 165 a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 165 AEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred HHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 34455 578866666777777778888888889988887777667777788999999999999764
No 165
>PLN02550 threonine dehydratase
Probab=50.35 E-value=2.1e+02 Score=30.29 Aligned_cols=109 Identities=11% Similarity=0.031 Sum_probs=64.8
Q ss_pred CCHHHHHHHHHHhcCCCCEEEECCccc--cHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceE
Q 045072 14 LTPLGFLERAATVYGDCPSIIYNNLIY--TWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAIL 91 (556)
Q Consensus 14 ~t~~~~l~~~~~~~p~~~a~~~~~~~~--Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 91 (556)
.|....+....+....++.+-..+.+- ||+. .-..+++.+ |.+....+| .|+ +..+-......++|.++|..+
T Consensus 109 ~TPL~~s~~LS~~~g~~IylK~E~lqptGSFK~-RGA~n~I~~-L~~e~~~~G-VV~--aSaGNhAqgvA~aA~~lGika 183 (591)
T PLN02550 109 ESPLQLAKKLSERLGVKVLLKREDLQPVFSFKL-RGAYNMMAK-LPKEQLDKG-VIC--SSAGNHAQGVALSAQRLGCDA 183 (591)
T ss_pred CChhhhhHHhhHhhCCEEEEEEcCCCCCCcHHH-HHHHHHHHH-HHHhcCCCC-EEE--ECCCHHHHHHHHHHHHcCCCE
Confidence 344444444444444555555555333 3443 222233333 323234555 333 566666677778899999888
Q ss_pred eccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHH
Q 045072 92 NNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVE 127 (556)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 127 (556)
..+=|...+......++..++.+++++....+....
T Consensus 184 ~IvmP~~tp~~Kv~~~r~~GAeVvl~g~~~dea~~~ 219 (591)
T PLN02550 184 VIAMPVTTPEIKWQSVERLGATVVLVGDSYDEAQAY 219 (591)
T ss_pred EEEECCCCCHHHHHHHHHcCCEEEEeCCCHHHHHHH
Confidence 877776666666778899999999998765544333
No 166
>PLN03052 acetate--CoA ligase; Provisional
Probab=49.10 E-value=1.6e+02 Score=32.39 Aligned_cols=98 Identities=12% Similarity=0.055 Sum_probs=67.9
Q ss_pred CCCcEEEEeccCCCCCCceEEEchHHHHHHHhhh---hhhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEec-C
Q 045072 187 EWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDS---LIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLR-K 262 (556)
Q Consensus 187 ~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~ 262 (556)
++.+|++....+..+.+ ...+|.+.+....... ....+++++|++...+|..-. .....+++...|+..+.+. .
T Consensus 189 pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e-~via~LA~~~~Gav~vpi~p~ 266 (728)
T PLN03052 189 DDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVH-AVIIYLAIILAGCVVVSIADS 266 (728)
T ss_pred CCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHH-HHHHHHHHHHcCCEEEeeCCC
Confidence 45666654333222222 3457888885544433 344689999999999997443 3445677788888887776 5
Q ss_pred CCHHHHHHHHHHhCCcEEechhHH
Q 045072 263 FDAAVIYKMIRQHGVTHMCGAPVV 286 (556)
Q Consensus 263 ~~~~~~~~~i~~~~~t~~~~~p~~ 286 (556)
+.++++...+++.++.++++....
T Consensus 267 ~~~~~l~~rl~~~~~k~lit~d~~ 290 (728)
T PLN03052 267 FAPSEIATRLKISKAKAIFTQDVI 290 (728)
T ss_pred CCHHHHHHHHHhcCceEEEEcCcc
Confidence 889999999999999999887643
No 167
>PRK08316 acyl-CoA synthetase; Validated
Probab=48.63 E-value=1.2e+02 Score=31.31 Aligned_cols=84 Identities=8% Similarity=-0.022 Sum_probs=60.9
Q ss_pred ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHH--HHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEE
Q 045072 38 LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPA--MYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLV 115 (556)
Q Consensus 38 ~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 115 (556)
..+|+..+...+. ......+++++|++...+|-... +...+++++..|+..++.+ ..+.+.+...+++.+++++
T Consensus 189 v~~s~~~l~~~~~---~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 264 (523)
T PRK08316 189 AMLTHRALIAEYV---SCIVAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILD-APDPELILRTIEAERITSF 264 (523)
T ss_pred EEEecHHHHHHHH---HHHHHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEec-CCCHHHHHHHHHHhCCeEE
Confidence 3488888765533 34445678999998887765433 3344667788999988864 4578999999999999998
Q ss_pred EEeccchhhH
Q 045072 116 LVDYQSRNLV 125 (556)
Q Consensus 116 i~~~~~~~~~ 125 (556)
++.+.....+
T Consensus 265 ~~~P~~~~~l 274 (523)
T PRK08316 265 FAPPTVWISL 274 (523)
T ss_pred EeCHHHHHHH
Confidence 8877655443
No 168
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=48.44 E-value=92 Score=31.93 Aligned_cols=84 Identities=15% Similarity=0.165 Sum_probs=61.3
Q ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHH-HHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEE
Q 045072 39 IYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAM-YEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLV 117 (556)
Q Consensus 39 ~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 117 (556)
.+|++.+...+... ....++.++|++...+|-.... +..+++.+..|+..+..+ ..+...+...+++.++.++..
T Consensus 160 ~~s~~~~~~~~~~~---~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 235 (483)
T PRK03640 160 IQTYGNHWWSAVGS---ALNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE-KFDAEKINKLLQTGGVTIISV 235 (483)
T ss_pred EEecHHHHHHHHHH---HHhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHhCCcEEEe
Confidence 48888776544332 2335889999999988754332 344677788899887664 578899999999999999999
Q ss_pred eccchhhHH
Q 045072 118 DYQSRNLVV 126 (556)
Q Consensus 118 ~~~~~~~~~ 126 (556)
.+.....+.
T Consensus 236 ~P~~~~~l~ 244 (483)
T PRK03640 236 VSTMLQRLL 244 (483)
T ss_pred HHHHHHHHH
Confidence 887665543
No 169
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=48.11 E-value=1.7e+02 Score=27.83 Aligned_cols=72 Identities=14% Similarity=0.093 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHcCC-CCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEecc
Q 045072 48 RCLQLASSLSSIGI-TRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQ 120 (556)
Q Consensus 48 ~~~~la~~L~~~g~-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 120 (556)
.+..+...+.+.|. .+|+.| +....+-.-....++|...|..+..+-|...+......++..++++++++.+
T Consensus 41 ~a~~~~~~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 41 IALSMIEDAEKRGLLKPGDTI-IEATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPAE 113 (299)
T ss_pred HHHHHHHHHHHcCCCCCCCEE-EEeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 33334444455554 677766 4556666666777788889988887777665566678899999999998764
No 170
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=47.88 E-value=1.7e+02 Score=32.02 Aligned_cols=103 Identities=9% Similarity=-0.030 Sum_probs=73.0
Q ss_pred eEEEchHHHHHHHhhhh---hhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEec-CCCHHHHHHHHHHhCCcEE
Q 045072 205 GVVHCHRGIFVMTVDSL---IDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLR-KFDAAVIYKMIRQHGVTHM 280 (556)
Q Consensus 205 ~v~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~ 280 (556)
-..+|.+.+...+.... ...++.+++++...++-...+ +...++++..|+..+.+. ...++++...+++.++.++
T Consensus 104 ~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~l 182 (696)
T PLN02387 104 YEWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEW-LIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTV 182 (696)
T ss_pred cEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEE
Confidence 35678888766544433 345889999998888764432 334567778888888776 4788999999999999999
Q ss_pred echhHHHHHHHcCCCCCCCCCCeEEEEeCC
Q 045072 281 CGAPVVLNMISNLPRSEPLRNPVHILTAGA 310 (556)
Q Consensus 281 ~~~p~~~~~l~~~~~~~~l~~l~~v~~~g~ 310 (556)
++....+..+.... ..++.++.++.-++
T Consensus 183 i~~~~~~~~l~~~~--~~~~~l~~ii~~~~ 210 (696)
T PLN02387 183 ICDSKQLKKLIDIS--SQLETVKRVIYMDD 210 (696)
T ss_pred EECHHHHHHHHHHh--hccCCceEEEEECC
Confidence 99888877775542 23445666665543
No 171
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=47.29 E-value=1.3e+02 Score=31.61 Aligned_cols=97 Identities=13% Similarity=0.094 Sum_probs=67.7
Q ss_pred cCCCCEEEEC--C-------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHH-HHHHHHHhhhccceEeccCC
Q 045072 27 YGDCPSIIYN--N-------LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPA-MYEAHFAIPFTGAILNNINT 96 (556)
Q Consensus 27 ~p~~~a~~~~--~-------~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~ 96 (556)
.++.++++.. | -.+|.+.+...+.... ...++.++|++....|-... .+...++.+..|+..+.. +
T Consensus 170 ~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~-~ 245 (563)
T PLN02860 170 APDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKI---AIVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL-P 245 (563)
T ss_pred CCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHH---hhcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec-C
Confidence 3566666542 1 3478887765544433 24578899988888775432 234567788889887765 5
Q ss_pred CCCHHHHHHHHhccCCeEEEEeccchhhHHH
Q 045072 97 RLDARTISVLLQHSESKLVLVDYQSRNLVVE 127 (556)
Q Consensus 97 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 127 (556)
..+...+...+++.++..+...+.....+..
T Consensus 246 ~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~ 276 (563)
T PLN02860 246 KFDAKAALQAIKQHNVTSMITVPAMMADLIS 276 (563)
T ss_pred CCCHHHHHHHHHHhCCeeEEeChHHHHHHHH
Confidence 6788999999999999999988876665543
No 172
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=47.24 E-value=86 Score=27.74 Aligned_cols=94 Identities=15% Similarity=0.141 Sum_probs=0.0
Q ss_pred CCCCEEEEecCh-hhhhhchhhhHhHhcCcEeEEe--cCCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCC------CC
Q 045072 227 PKQPVYLWTLPM-FHANGWSYPWGMAAVGGTNVCL--RKFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPR------SE 297 (556)
Q Consensus 227 ~~~~~~~~~~pl-~~~~g~~~~~~~~~~g~~~~~~--~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~------~~ 297 (556)
....+++.+.+- .|..|....-..+-..|--++. ....++++.+.+++.+|+++..+-+....+....+ ..
T Consensus 83 ~~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~ 162 (197)
T TIGR02370 83 VLGKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEE 162 (197)
T ss_pred CCCeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHc
Q ss_pred CCCCCeEEEEeCCCCcHHHHHHh
Q 045072 298 PLRNPVHILTAGAPPPAAVLFRT 320 (556)
Q Consensus 298 ~l~~l~~v~~~g~~~~~~~~~~~ 320 (556)
.+..--.+++||.+++++..+.+
T Consensus 163 ~~~~~v~i~vGG~~~~~~~~~~~ 185 (197)
T TIGR02370 163 GYRDSVKFMVGGAPVTQDWADKI 185 (197)
T ss_pred CCCCCCEEEEEChhcCHHHHHHh
No 173
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=46.87 E-value=1.2e+02 Score=30.10 Aligned_cols=62 Identities=16% Similarity=0.093 Sum_probs=48.3
Q ss_pred HcC-CCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEec
Q 045072 58 SIG-ITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDY 119 (556)
Q Consensus 58 ~~g-~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 119 (556)
+.| +++|....+....+-.-+...++|...|..+..+-|..........++..++++++++.
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 344 67885555556677777888888899999888887776667778899999999999874
No 174
>PLN02614 long-chain acyl-CoA synthetase
Probab=46.87 E-value=4e+02 Score=28.94 Aligned_cols=85 Identities=11% Similarity=-0.055 Sum_probs=62.9
Q ss_pred EEEchHHHHHHHhhh---hhhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEec-CCCHHHHHHHHHHhCCcEEe
Q 045072 206 VVHCHRGIFVMTVDS---LIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLR-KFDAAVIYKMIRQHGVTHMC 281 (556)
Q Consensus 206 v~~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 281 (556)
..+|.+.+...+... ....+++++|++...++-...+ ....+++...|+..+.+. ...+.++...+++.++.+++
T Consensus 78 ~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~-~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi 156 (666)
T PLN02614 78 VWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEW-IISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVF 156 (666)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEE
Confidence 456888775544443 3346889999998888875442 334567778888887776 47889999999999999999
Q ss_pred chhHHHHHHH
Q 045072 282 GAPVVLNMIS 291 (556)
Q Consensus 282 ~~p~~~~~l~ 291 (556)
+....+..+.
T Consensus 157 ~~~~~~~~~~ 166 (666)
T PLN02614 157 VEEKKISELF 166 (666)
T ss_pred ECHHHHHHHH
Confidence 9887666554
No 175
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=46.79 E-value=54 Score=27.04 Aligned_cols=43 Identities=12% Similarity=0.037 Sum_probs=34.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCC---hHHHHHHHHHhhhccceEe
Q 045072 50 LQLASSLSSIGITRGHVVSVVAPN---IPAMYEAHFAIPFTGAILN 92 (556)
Q Consensus 50 ~~la~~L~~~g~~~gd~V~i~~~~---~~~~~~~~lA~~~~G~~~v 92 (556)
+.++..|.+.|+.+++.|.+++.. +.....+++++-.+|..-+
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v 126 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDV 126 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCe
Confidence 478888999999999999999975 5666677777788886533
No 176
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=46.66 E-value=2.8e+02 Score=29.29 Aligned_cols=88 Identities=15% Similarity=0.189 Sum_probs=61.4
Q ss_pred ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHH-HHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEE
Q 045072 38 LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAM-YEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVL 116 (556)
Q Consensus 38 ~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 116 (556)
-.+|++.+...+..+. .....++.++|++...+|-...+ +...++.+..|+..+...+..+.+.+...+++.++.+++
T Consensus 199 v~~s~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 277 (576)
T PRK05620 199 VVYSHRSLYLQSLSLR-TTDSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAH 277 (576)
T ss_pred EEEEcHHHHHHHHHhh-hhhhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceee
Confidence 3478877754443322 12235788999998888765543 334577788888877766677889999999999999998
Q ss_pred EeccchhhHH
Q 045072 117 VDYQSRNLVV 126 (556)
Q Consensus 117 ~~~~~~~~~~ 126 (556)
........+.
T Consensus 278 ~~P~~~~~l~ 287 (576)
T PRK05620 278 GVPTLWIQLM 287 (576)
T ss_pred ecCHHHHHHH
Confidence 8776554433
No 177
>PRK07638 acyl-CoA synthetase; Validated
Probab=46.39 E-value=1.2e+02 Score=31.08 Aligned_cols=86 Identities=5% Similarity=0.022 Sum_probs=61.8
Q ss_pred ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHH-HHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEE
Q 045072 38 LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPA-MYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVL 116 (556)
Q Consensus 38 ~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 116 (556)
-.+|.+.+...+...+ ...+++++|++....+-... ++...+..+..|+..+.. +..++.++...+++.+++++.
T Consensus 161 v~~s~~~~~~~~~~~~---~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 236 (487)
T PRK07638 161 FLRAQQSWLHSFDCNV---HDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVMY 236 (487)
T ss_pred EEEecHHHHHHHHHHH---HhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEEE
Confidence 3477777765554333 34578899998887665443 345566778889888765 567889999999999999999
Q ss_pred EeccchhhHHH
Q 045072 117 VDYQSRNLVVE 127 (556)
Q Consensus 117 ~~~~~~~~~~~ 127 (556)
..+.....+..
T Consensus 237 ~~P~~~~~l~~ 247 (487)
T PRK07638 237 TVPTMLESLYK 247 (487)
T ss_pred eCcHHHHHHHh
Confidence 98876655443
No 178
>PRK06164 acyl-CoA synthetase; Validated
Probab=46.04 E-value=1.3e+02 Score=31.36 Aligned_cols=96 Identities=14% Similarity=0.161 Sum_probs=69.1
Q ss_pred CCCCEEEEC--C-------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHH-HHHHHHHhhhccceEeccCCC
Q 045072 28 GDCPSIIYN--N-------LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPA-MYEAHFAIPFTGAILNNINTR 97 (556)
Q Consensus 28 p~~~a~~~~--~-------~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~ 97 (556)
++.++++.. | -.+|...+...+..++..+ ++.+++++...+|-+.. .+..+++.+..|+..+.. +.
T Consensus 180 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~ 255 (540)
T PRK06164 180 PDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE-PV 255 (540)
T ss_pred CCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-CC
Confidence 466677662 1 3578888877666555444 67899999888876433 245578888889887765 56
Q ss_pred CCHHHHHHHHhccCCeEEEEeccchhhHHH
Q 045072 98 LDARTISVLLQHSESKLVLVDYQSRNLVVE 127 (556)
Q Consensus 98 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 127 (556)
.....+...+++.++..++........+..
T Consensus 256 ~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~ 285 (540)
T PRK06164 256 FDAARTARALRRHRVTHTFGNDEMLRRILD 285 (540)
T ss_pred CCHHHHHHHHHHhCCeeecCCHHHHHHHHH
Confidence 678889999999999999987776655443
No 179
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=45.56 E-value=1.9e+02 Score=31.31 Aligned_cols=78 Identities=10% Similarity=0.053 Sum_probs=59.8
Q ss_pred EEEchHHHHHHHhhhh---hhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEec-CCCHHHHHHHHHHhCCcEEe
Q 045072 206 VVHCHRGIFVMTVDSL---IDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLR-KFDAAVIYKMIRQHGVTHMC 281 (556)
Q Consensus 206 v~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 281 (556)
..+|.+.+........ ...+++++|++...+|..-.+ ....+++...|+..+.+. .+.+.++...+++.++++++
T Consensus 91 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~-~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li 169 (647)
T PTZ00237 91 IKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEP-LIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLII 169 (647)
T ss_pred EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEE
Confidence 5689988865544433 346899999999999885443 344567778888877775 58899999999999999998
Q ss_pred chh
Q 045072 282 GAP 284 (556)
Q Consensus 282 ~~p 284 (556)
+..
T Consensus 170 ~~~ 172 (647)
T PTZ00237 170 TTN 172 (647)
T ss_pred Ecc
Confidence 764
No 180
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=45.56 E-value=1.2e+02 Score=31.80 Aligned_cols=87 Identities=14% Similarity=0.003 Sum_probs=66.0
Q ss_pred eEEEchHHHHHHHhhhhhhc-----CCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEec-CCCHHHHHHHHHHhCCc
Q 045072 205 GVVHCHRGIFVMTVDSLIDW-----SIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLR-KFDAAVIYKMIRQHGVT 278 (556)
Q Consensus 205 ~v~~t~~~~~~~~~~~~~~~-----~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t 278 (556)
+..+|+..+...+.+....+ +++.+|++...+|-...+. ...++++..|+.+.... .++..++...++.-++.
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~-~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~k 121 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFV-ELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPK 121 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCccccccCcccCHHHHHHHHHhcCCe
Confidence 78899998877666655443 3788999999999854432 23457777787776665 47899999999999999
Q ss_pred EEechhHHHHHHHc
Q 045072 279 HMCGAPVVLNMISN 292 (556)
Q Consensus 279 ~~~~~p~~~~~l~~ 292 (556)
+++.....+..+..
T Consensus 122 iif~d~~~~~~i~~ 135 (537)
T KOG1176|consen 122 LIFVDEDFYDKISE 135 (537)
T ss_pred EEEEcCchHHHHHH
Confidence 99998877766643
No 181
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=45.52 E-value=2.4e+02 Score=25.84 Aligned_cols=68 Identities=10% Similarity=-0.070 Sum_probs=47.0
Q ss_pred HHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchh
Q 045072 55 SLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRN 123 (556)
Q Consensus 55 ~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 123 (556)
.+.+.|..+++.|.. ...+-.-..+.++|...|..+..+-|..........++..+++++.++....+
T Consensus 41 ~a~~~g~~~~~~vv~-~ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~ 108 (244)
T cd00640 41 LAEEEGKLPKGVIIE-STGGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPGDFDD 108 (244)
T ss_pred HHHHcCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHHH
Confidence 344444324555444 44466667777788889988888877767777788889999999998876433
No 182
>PRK08308 acyl-CoA synthetase; Validated
Probab=45.50 E-value=2.1e+02 Score=28.62 Aligned_cols=84 Identities=10% Similarity=0.139 Sum_probs=61.1
Q ss_pred ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHH--HHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEE
Q 045072 38 LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPA--MYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLV 115 (556)
Q Consensus 38 ~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 115 (556)
..+|++.+...+..+... .++..+|++...+|.... ++..+++++..|+..+..+ ..++..+...+++.++.++
T Consensus 119 v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~~ 194 (414)
T PRK08308 119 IRRSWTEIDREIEAYNEA---LNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT-NKNPKFALNILRNTPQHIL 194 (414)
T ss_pred EEEehHhHHHHHHHHHHh---hCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC-CCCHHHHHHHHHHhCCeEE
Confidence 358998887766555443 456788988877776543 3556788899999887764 4567888889999999988
Q ss_pred EEeccchhhH
Q 045072 116 LVDYQSRNLV 125 (556)
Q Consensus 116 i~~~~~~~~~ 125 (556)
+..+.....+
T Consensus 195 ~~~P~~~~~l 204 (414)
T PRK08308 195 YAVPLMLHIL 204 (414)
T ss_pred EcCHHHHHHH
Confidence 8776655443
No 183
>PRK06188 acyl-CoA synthetase; Validated
Probab=45.49 E-value=1.7e+02 Score=30.44 Aligned_cols=84 Identities=7% Similarity=-0.008 Sum_probs=62.9
Q ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEe
Q 045072 39 IYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVD 118 (556)
Q Consensus 39 ~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 118 (556)
.+|+..+...+.. .....++..+|++...+|-+..+...+++.+..|+..+..+ ..+++.+...+++.++.+++..
T Consensus 187 ~~s~~~l~~~~~~---~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~ 262 (524)
T PRK06188 187 MGTHRSIATMAQI---QLAEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA-KFDPAEVLRAIEEQRITATFLV 262 (524)
T ss_pred eeehHHHHHHHHH---HHhhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHhCCEEEEeh
Confidence 4777777665543 33346788899998888877666666778888898887765 4678899999999999999987
Q ss_pred ccchhhHH
Q 045072 119 YQSRNLVV 126 (556)
Q Consensus 119 ~~~~~~~~ 126 (556)
......+.
T Consensus 263 P~~l~~l~ 270 (524)
T PRK06188 263 PTMIYALL 270 (524)
T ss_pred HHHHHHHH
Confidence 76655443
No 184
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=45.26 E-value=2.2e+02 Score=29.47 Aligned_cols=95 Identities=17% Similarity=0.050 Sum_probs=66.8
Q ss_pred CCCCEEEEC---------CccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHH--HHHHHHHhhhccceEeccCC
Q 045072 28 GDCPSIIYN---------NLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPA--MYEAHFAIPFTGAILNNINT 96 (556)
Q Consensus 28 p~~~a~~~~---------~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~ 96 (556)
++.++++.. +-.+|++.+...+.... ....+++++|++...+|-... +...+++.+..|+..+..++
T Consensus 160 ~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~ 237 (508)
T TIGR02262 160 ADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYA--RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGE 237 (508)
T ss_pred CCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHh--HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCC
Confidence 456666553 14478877766543321 233588999998888776554 33456777889988887776
Q ss_pred CCCHHHHHHHHhccCCeEEEEeccchhh
Q 045072 97 RLDARTISVLLQHSESKLVLVDYQSRNL 124 (556)
Q Consensus 97 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 124 (556)
..+...+...+++.++..+...+.....
T Consensus 238 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 265 (508)
T TIGR02262 238 RPTPDAVFDRLRRHQPTIFYGVPTLYAA 265 (508)
T ss_pred CCCHHHHHHHHHHHCCcEEecchHHHHH
Confidence 6678899999999999999988765443
No 185
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=45.23 E-value=78 Score=31.45 Aligned_cols=58 Identities=19% Similarity=0.247 Sum_probs=32.9
Q ss_pred HHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCC-----CCHHHHHHHHhccCCeEEEE
Q 045072 56 LSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTR-----LDARTISVLLQHSESKLVLV 117 (556)
Q Consensus 56 L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~ 117 (556)
+...++++||.|.+-.+..+ ....++...|+.+++++.+ .+.+.+...++. +.++|+.
T Consensus 63 l~al~~~pGd~Viv~~~t~~---~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip 125 (376)
T TIGR02379 63 ALLLDIQPGDEVIMPSYTFV---STANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVP 125 (376)
T ss_pred HHHcCCCCcCEEEECCCCcH---HHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEE
Confidence 34446778887776544333 3344555667777666532 345666665543 5555554
No 186
>PRK09274 peptide synthase; Provisional
Probab=44.79 E-value=1.4e+02 Score=31.28 Aligned_cols=97 Identities=5% Similarity=-0.079 Sum_probs=64.1
Q ss_pred CCCcEEEEeccCC-CCCCceEEEchHHHHHHHhhhh---hhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecC
Q 045072 187 EWDPMILNYTSGT-TSSPKGVVHCHRGIFVMTVDSL---IDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRK 262 (556)
Q Consensus 187 ~~~~a~i~~TsGT-TG~pK~v~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~ 262 (556)
++.++++....++ ....+...+|...+...+.... ...+++++|++...++-... .....++++..|+..+.+.+
T Consensus 20 p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~-~~~~~la~~~~G~~~v~l~~ 98 (552)
T PRK09274 20 PDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLE-FFALTFALFKAGAVPVLVDP 98 (552)
T ss_pred CCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHH-HHHHHHHHHHcCeEEEEcCC
Confidence 3455555432222 1223334678888865444433 34578999999888876433 23446778888888887764
Q ss_pred -CCHHHHHHHHHHhCCcEEechh
Q 045072 263 -FDAAVIYKMIRQHGVTHMCGAP 284 (556)
Q Consensus 263 -~~~~~~~~~i~~~~~t~~~~~p 284 (556)
...+++...+++.++..++..+
T Consensus 99 ~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 99 GMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CccHHHHHHHHHhcCCCEEEecc
Confidence 6778899999999999888754
No 187
>PRK06381 threonine synthase; Validated
Probab=44.62 E-value=2.2e+02 Score=27.44 Aligned_cols=108 Identities=11% Similarity=-0.012 Sum_probs=65.4
Q ss_pred CCCCCHHHHHHHHHHhcC-CCCEEEECCcc--ccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhc
Q 045072 11 SSPLTPLGFLERAATVYG-DCPSIIYNNLI--YTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFT 87 (556)
Q Consensus 11 ~~~~t~~~~l~~~~~~~p-~~~a~~~~~~~--~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~ 87 (556)
....|+.-.+....+... .++.+-..+.. =||++ +.+..+...+.+.|. +.| +.+..+-.-..+.++|...
T Consensus 12 ~~g~TPL~~~~~l~~~~G~~~i~~K~E~~nptGS~K~--R~a~~~l~~a~~~g~---~~l-v~aSsGN~g~alA~~aa~~ 85 (319)
T PRK06381 12 PPGGTPLLRARKLEEELGLRKIYLKFEGANPTGTQKD--RIAEAHVRRAMRLGY---SGI-TVGTCGNYGASIAYFARLY 85 (319)
T ss_pred cCCCCceeEhHhhHHhcCCceEEEEecCCCCccCcHH--HHHHHHHHHHHHcCC---CEE-EEeCCcHHHHHHHHHHHHc
Confidence 344455544555444443 35666655532 33333 223333333445452 344 4466677777888889999
Q ss_pred cceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhh
Q 045072 88 GAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNL 124 (556)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 124 (556)
|..+..+-|..........++..++++++++.+....
T Consensus 86 G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~~~~~~ 122 (319)
T PRK06381 86 GLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDGKYEEA 122 (319)
T ss_pred CCcEEEEECCCCCHHHHHHHHHcCCEEEEcCCCHHHH
Confidence 9888877666555566678999999999998764433
No 188
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=44.36 E-value=3.1e+02 Score=28.67 Aligned_cols=95 Identities=9% Similarity=0.056 Sum_probs=66.5
Q ss_pred CCCCEEEEC--C-------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHH--HHHHHHHhhhccceEeccCC
Q 045072 28 GDCPSIIYN--N-------LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPA--MYEAHFAIPFTGAILNNINT 96 (556)
Q Consensus 28 p~~~a~~~~--~-------~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~ 96 (556)
++.+|++.. | -.+|+..+...+... ....+++++|++....|-+.. ++..+++.+..|+..+.. +
T Consensus 196 ~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~---~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~-~ 271 (547)
T PRK13295 196 PDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPY---AERLGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQ-D 271 (547)
T ss_pred CcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHH---HHHhCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeC-C
Confidence 456666552 1 347888776655443 344578899998888776533 455677888999987765 4
Q ss_pred CCCHHHHHHHHhccCCeEEEEeccchhhHH
Q 045072 97 RLDARTISVLLQHSESKLVLVDYQSRNLVV 126 (556)
Q Consensus 97 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 126 (556)
..+.+.+...+++.++..++........+.
T Consensus 272 ~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~ 301 (547)
T PRK13295 272 IWDPARAAELIRTEGVTFTMASTPFLTDLT 301 (547)
T ss_pred CCCHHHHHHHHHHcCCcEEEecHHHHHHHH
Confidence 567899999999999998887666554433
No 189
>PRK07470 acyl-CoA synthetase; Validated
Probab=44.23 E-value=2.5e+02 Score=29.23 Aligned_cols=99 Identities=18% Similarity=0.128 Sum_probs=63.0
Q ss_pred CCCCEEEECC---------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccC-CC
Q 045072 28 GDCPSIIYNN---------LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNIN-TR 97 (556)
Q Consensus 28 p~~~a~~~~~---------~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~-~~ 97 (556)
++.++++... -.+|.+.+...+......+. .++.++|++..++|-+..+-...+..+..|+..+.++ ..
T Consensus 162 ~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~ 240 (528)
T PRK07470 162 HDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLM-PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSER 240 (528)
T ss_pred CCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhc-cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEecccC
Confidence 3556666531 34788877544332211111 2677889888888866554333344455566655443 35
Q ss_pred CCHHHHHHHHhccCCeEEEEeccchhhHHH
Q 045072 98 LDARTISVLLQHSESKLVLVDYQSRNLVVE 127 (556)
Q Consensus 98 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 127 (556)
.+.+.+...+++.++.+++..+.....+..
T Consensus 241 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 270 (528)
T PRK07470 241 FDPAEVWALVERHRVTNLFTVPTILKMLVE 270 (528)
T ss_pred cCHHHHHHHHHhcCCeEEechHHHHHHHHh
Confidence 678899999999999999988877765543
No 190
>PRK06382 threonine dehydratase; Provisional
Probab=44.04 E-value=1.6e+02 Score=29.67 Aligned_cols=56 Identities=7% Similarity=0.023 Sum_probs=42.3
Q ss_pred EEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhh
Q 045072 69 VVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNL 124 (556)
Q Consensus 69 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 124 (556)
+.+..+-......++|..+|..+..+=|...+......++..++.++++.....+.
T Consensus 77 v~aSsGN~g~a~A~aa~~~G~~~~ivmp~~~~~~k~~~~~~~GA~Vv~~~~~~~~a 132 (406)
T PRK06382 77 ITASAGNHAQGVAYAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVILTGRDYDEA 132 (406)
T ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCEEEEECCCHHHH
Confidence 34455666666778899999888888777776677788999999999988754443
No 191
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=43.83 E-value=1.4e+02 Score=29.34 Aligned_cols=58 Identities=7% Similarity=-0.077 Sum_probs=47.1
Q ss_pred EEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHH
Q 045072 69 VVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVV 126 (556)
Q Consensus 69 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 126 (556)
+.++-+-....+.+|+.++|..+..+=|...+....+.++..++.+++..++..+.-.
T Consensus 118 iasSaGNha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~~deAk~ 175 (457)
T KOG1250|consen 118 IASSAGNHAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGEDWDEAKA 175 (457)
T ss_pred EEecCccHHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEecccHHHHHH
Confidence 3445555677888999999999998889999999999999999999998876655433
No 192
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=43.71 E-value=2.2e+02 Score=27.46 Aligned_cols=61 Identities=13% Similarity=0.034 Sum_probs=46.2
Q ss_pred cCCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEecc
Q 045072 59 IGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQ 120 (556)
Q Consensus 59 ~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 120 (556)
.|..+++.|.... .+-.-....++|...|..+..+-|..........++..++++++++..
T Consensus 46 ~g~~~~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~ 106 (316)
T cd06448 46 QGLNECVHVVCSS-GGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV 106 (316)
T ss_pred hhcccCCeEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc
Confidence 3434456655544 466667777888999999888878777777788999999999998765
No 193
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=43.64 E-value=2.1e+02 Score=31.50 Aligned_cols=117 Identities=11% Similarity=0.075 Sum_probs=77.1
Q ss_pred CCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhhh------cCCCCC-----------CEEEEecChhhhhhchhhhH
Q 045072 187 EWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLID------WSIPKQ-----------PVYLWTLPMFHANGWSYPWG 249 (556)
Q Consensus 187 ~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~~------~~~~~~-----------~~~~~~~pl~~~~g~~~~~~ 249 (556)
++.+|++.... |.+ ...+|.+.+...+...... .++.++ |++...++-... -+...++
T Consensus 75 p~~~Al~~~~~---g~~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~e-w~~~~lA 149 (746)
T PTZ00342 75 NNKIAIVEHSC---GEP-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSIN-WLVADLA 149 (746)
T ss_pred CCceeEeccCC---CCC-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHH-HHHHHHH
Confidence 45666653322 211 2457888775544443322 367776 788777765433 2344677
Q ss_pred hHhcCcEeEEec-CCCHHHHHHHHHHhCCcEEechhHHHHHHHcCCCCCCCCCCeEEEEeCC
Q 045072 250 MAAVGGTNVCLR-KFDAAVIYKMIRQHGVTHMCGAPVVLNMISNLPRSEPLRNPVHILTAGA 310 (556)
Q Consensus 250 ~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~l~~v~~~g~ 310 (556)
++..|+..+.+. .+.++++...+++-++.++++.+..+..+.+.. ..++.++.++..+.
T Consensus 150 ~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~--~~~~~l~~ii~~~~ 209 (746)
T PTZ00342 150 CMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERK--NELPHLKKLIILDT 209 (746)
T ss_pred HHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhh--ccCCCceEEEEECC
Confidence 888888888776 588999999999999999999888877776542 33566777776543
No 194
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=42.66 E-value=3.6e+02 Score=27.64 Aligned_cols=60 Identities=17% Similarity=0.098 Sum_probs=39.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCC-CCCHHHHHHHHhccCCeEEEEeccc
Q 045072 61 ITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINT-RLDARTISVLLQHSESKLVLVDYQS 121 (556)
Q Consensus 61 ~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~-~~~~~~l~~~l~~~~~~~vi~~~~~ 121 (556)
+.+||+|++=-| +..-....|-.+.+-.+.+|++. .+..+.+...++.-+++++++.+.+
T Consensus 176 ~~pGd~v~vE~P-tY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~ 236 (459)
T COG1167 176 LDPGDTVLVEDP-TYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTF 236 (459)
T ss_pred CCCCCEEEEcCC-CcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCC
Confidence 346777776555 44444444444555555555543 6678999999998899999997643
No 195
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=42.08 E-value=2.4e+02 Score=26.69 Aligned_cols=66 Identities=9% Similarity=0.035 Sum_probs=48.3
Q ss_pred HHHHcCC-CCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccc
Q 045072 55 SLSSIGI-TRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQS 121 (556)
Q Consensus 55 ~L~~~g~-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 121 (556)
.+.+.|. ++|+.|.. ...+-.-....++|.++|..+..+-|..........++..++++++++...
T Consensus 43 ~a~~~g~~~~~~~vv~-~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 43 DAEKRGLLKPGTTIIE-PTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEAE 109 (291)
T ss_pred HHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 3444453 35666544 666777777788889999888877776666667788999999999998764
No 196
>PRK07788 acyl-CoA synthetase; Validated
Probab=41.65 E-value=1.7e+02 Score=30.72 Aligned_cols=85 Identities=12% Similarity=0.038 Sum_probs=59.9
Q ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHH-HHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEE
Q 045072 39 IYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAM-YEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLV 117 (556)
Q Consensus 39 ~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 117 (556)
.+|...+...+. ......++.++|++....|-...+ +..+++++..|+..+.. +..+++++...+++.+++++..
T Consensus 226 ~~s~~~~~~~~~---~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~vt~~~~ 301 (549)
T PRK07788 226 PRPEPSPLAPLA---GLLSRVPFRAGETTLLPAPMFHATGWAHLTLAMALGSTVVLR-RRFDPEATLEDIAKHKATALVV 301 (549)
T ss_pred eccCccHHHHHH---HHHhhCCCCcCCeEEEccchHHHHHHHHHHHHHHhCCEEEEC-CCCCHHHHHHHHHHhCCcEEEE
Confidence 366666654433 334456788999888777754443 23456678889887765 5678889999999999999999
Q ss_pred eccchhhHHH
Q 045072 118 DYQSRNLVVE 127 (556)
Q Consensus 118 ~~~~~~~~~~ 127 (556)
.+.....+..
T Consensus 302 ~P~~~~~l~~ 311 (549)
T PRK07788 302 VPVMLSRILD 311 (549)
T ss_pred HHHHHHHHHh
Confidence 8877665543
No 197
>PRK07476 eutB threonine dehydratase; Provisional
Probab=41.04 E-value=1.8e+02 Score=28.09 Aligned_cols=56 Identities=13% Similarity=0.006 Sum_probs=41.4
Q ss_pred EEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhh
Q 045072 69 VVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNL 124 (556)
Q Consensus 69 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 124 (556)
+....+-.-....++|.+.|..+..+-|...+......++..++.+++++....+.
T Consensus 71 v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~~~~~ 126 (322)
T PRK07476 71 VTASTGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRSQDDA 126 (322)
T ss_pred EEECCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCCHHHH
Confidence 33355666677778888999887777676666667788899999999998654433
No 198
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=40.50 E-value=51 Score=23.90 Aligned_cols=42 Identities=17% Similarity=0.050 Sum_probs=35.2
Q ss_pred HHHHHH-cCCCCCCEEEEEcCChHHHHHHHHHhhhccceEecc
Q 045072 53 ASSLSS-IGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNI 94 (556)
Q Consensus 53 a~~L~~-~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 94 (556)
..+|++ .|++.|+.++.+.....+.++.+=|.+++.-+-+..
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~~~ 45 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVELAT 45 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceeeEe
Confidence 457777 699999999999999999999999999988665433
No 199
>PLN00011 cysteine synthase
Probab=40.41 E-value=1.8e+02 Score=28.10 Aligned_cols=67 Identities=13% Similarity=0.022 Sum_probs=48.8
Q ss_pred HHHHHHcC-CCCC-CEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEecc
Q 045072 53 ASSLSSIG-ITRG-HVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQ 120 (556)
Q Consensus 53 a~~L~~~g-~~~g-d~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 120 (556)
-....+.| +.+| +.|. ....+-.-....++|..+|..+..+-|..........++..++.+++++..
T Consensus 56 l~~a~~~g~~~~g~~~vv-~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 56 IKDAEDKGLITPGKSTLI-EATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred HHHHHHcCCCCCCCcEEE-EeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 33344444 6777 5554 466677777777888899988887767665667778999999999998864
No 200
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=39.84 E-value=1.5e+02 Score=31.20 Aligned_cols=85 Identities=8% Similarity=0.004 Sum_probs=64.2
Q ss_pred EEchHHHHHHHhhhhh---hcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecC-CCHHHHHHHHHHhCCcEEec
Q 045072 207 VHCHRGIFVMTVDSLI---DWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRK-FDAAVIYKMIRQHGVTHMCG 282 (556)
Q Consensus 207 ~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~~~~ 282 (556)
.+|...+......... ..++.+++++....+-...+ +...++++..|+..+.+.+ .+..++...+++.+++.++.
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~ 124 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVV 124 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEE
Confidence 5788877655444433 45788999998887775554 4456788888988888764 78899999999999999999
Q ss_pred hhHHHHHHHc
Q 045072 283 APVVLNMISN 292 (556)
Q Consensus 283 ~p~~~~~l~~ 292 (556)
.+.....+.+
T Consensus 125 ~~~~~~~~~~ 134 (542)
T PRK06155 125 EAALLAALEA 134 (542)
T ss_pred ChhhHHHHHH
Confidence 8877666543
No 201
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=39.80 E-value=3.2e+02 Score=28.40 Aligned_cols=96 Identities=7% Similarity=-0.043 Sum_probs=66.3
Q ss_pred cCCCCEEEEC---------CccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHH---HHHHhhhccceEecc
Q 045072 27 YGDCPSIIYN---------NLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYE---AHFAIPFTGAILNNI 94 (556)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~---~~lA~~~~G~~~v~l 94 (556)
.++.+|++.. +..+|...+...+.... ...++.++|++...+|....+-. ..++++..|+..+..
T Consensus 181 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~ 257 (527)
T TIGR02275 181 KSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSV---EICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLA 257 (527)
T ss_pred CCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHH---hhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEEC
Confidence 4566666652 14588888776555433 34578889999888876544322 357778889887654
Q ss_pred CCCCCHHHHHHHHhccCCeEEEEeccchhhHH
Q 045072 95 NTRLDARTISVLLQHSESKLVLVDYQSRNLVV 126 (556)
Q Consensus 95 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 126 (556)
+......+...+++.++.++.........+.
T Consensus 258 -~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 288 (527)
T TIGR02275 258 -PDPSPTDCFPLIERHKVTVTALVPPAVALWM 288 (527)
T ss_pred -CCCCHHHHHHHHHHhCCeEEEecHHHHHHHH
Confidence 4557788888999999999998877665443
No 202
>PLN02654 acetate-CoA ligase
Probab=39.67 E-value=2.6e+02 Score=30.34 Aligned_cols=80 Identities=14% Similarity=0.055 Sum_probs=60.3
Q ss_pred eEEEchHHHHHHHhhh---hhhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEec-CCCHHHHHHHHHHhCCcEE
Q 045072 205 GVVHCHRGIFVMTVDS---LIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLR-KFDAAVIYKMIRQHGVTHM 280 (556)
Q Consensus 205 ~v~~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~ 280 (556)
...+|.+.+...+... ....+++++|++...+|..-. .....+++...|+..+.+. .+.++++...++..++..+
T Consensus 118 ~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e-~v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~l 196 (666)
T PLN02654 118 DASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLME-LPIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVV 196 (666)
T ss_pred eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEE
Confidence 3568998886654443 345689999999999887543 2344667778888877775 5889999999999999999
Q ss_pred echhH
Q 045072 281 CGAPV 285 (556)
Q Consensus 281 ~~~p~ 285 (556)
++...
T Consensus 197 i~~~~ 201 (666)
T PLN02654 197 ITCNA 201 (666)
T ss_pred EEcCc
Confidence 87654
No 203
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=39.24 E-value=2.6e+02 Score=30.22 Aligned_cols=94 Identities=10% Similarity=-0.047 Sum_probs=65.2
Q ss_pred CCCcEEEEeccCCCCCCceEEEchHHHHHHHhhh---hhhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEec-C
Q 045072 187 EWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDS---LIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLR-K 262 (556)
Q Consensus 187 ~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~ 262 (556)
++.+|++.... .| ....+|.+.+....... ....+++++|++...+|..-. .....++++..|+..+.+. .
T Consensus 98 ~~~~Al~~~~~--~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~v~~~lA~~~~Gav~v~l~~~ 172 (655)
T PRK03584 98 DDRPAIIFRGE--DG--PRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPE-TVVAMLATASLGAIWSSCSPD 172 (655)
T ss_pred CCCeEEEEECC--CC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCcEEEeeCCC
Confidence 34666554322 22 13568888886544443 334588999999999886433 3445678888888887776 4
Q ss_pred CCHHHHHHHHHHhCCcEEechhH
Q 045072 263 FDAAVIYKMIRQHGVTHMCGAPV 285 (556)
Q Consensus 263 ~~~~~~~~~i~~~~~t~~~~~p~ 285 (556)
+.+..+...++..++..+++...
T Consensus 173 ~~~~~l~~~l~~~~~~~li~~~~ 195 (655)
T PRK03584 173 FGVQGVLDRFGQIEPKVLIAVDG 195 (655)
T ss_pred CCHHHHHHHHHHcCCcEEEEccc
Confidence 78899999999999999887653
No 204
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=39.22 E-value=1.3e+02 Score=29.82 Aligned_cols=56 Identities=16% Similarity=0.240 Sum_probs=31.0
Q ss_pred HcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCC-----CCHHHHHHHHhccCCeEEEE
Q 045072 58 SIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTR-----LDARTISVLLQHSESKLVLV 117 (556)
Q Consensus 58 ~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~ 117 (556)
..++++||.|.+-.+..+.. ..++...|+.++.++.+ .+.+.+...++. +.++|+.
T Consensus 65 ~~~~~~Gd~Viv~~~t~~~~---~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~ 125 (375)
T PRK11706 65 LLDIQPGDEVIMPSYTFVST---ANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVP 125 (375)
T ss_pred HhCCCCCCEEEECCCCcHHH---HHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEE
Confidence 34567777776655544333 34445567766665432 345666666644 4555553
No 205
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=39.20 E-value=1.3e+02 Score=21.70 Aligned_cols=66 Identities=6% Similarity=0.077 Sum_probs=52.4
Q ss_pred ccccHHHHHHHHHHHHH---HHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeE
Q 045072 38 LIYTWSQTHRRCLQLAS---SLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKL 114 (556)
Q Consensus 38 ~~~Ty~~l~~~~~~la~---~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (556)
...||.+|.+..+.++. +|....+...|-|+|+.=++... .-++.++...+.++++..+++.++++
T Consensus 8 gi~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~S-----------y~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 8 GIATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTSS-----------YYVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred hheeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCcee-----------EEEEEEeccCCHHHHHHHHHHhCchh
Confidence 35799999988876655 56667889999999987766543 34567888889999999999999885
No 206
>PRK06839 acyl-CoA synthetase; Validated
Probab=39.06 E-value=4e+02 Score=27.27 Aligned_cols=96 Identities=13% Similarity=0.140 Sum_probs=64.1
Q ss_pred CCCCEEEEC--C-------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHH--HHHHHHHhhhccceEeccCC
Q 045072 28 GDCPSIIYN--N-------LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPA--MYEAHFAIPFTGAILNNINT 96 (556)
Q Consensus 28 p~~~a~~~~--~-------~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~ 96 (556)
++.++++.. | -.+|+..+...+... ....++.++|++...+|-... +....++++..|+..+. .+
T Consensus 148 ~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~---~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~-~~ 223 (496)
T PRK06839 148 ESASFIICYTSGTTGKPKGAVLTQENMFWNALNN---TFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIV-PR 223 (496)
T ss_pred CCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHH---HHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEE-cc
Confidence 456666642 1 347787775443322 334578899998887775433 23344677888887654 45
Q ss_pred CCCHHHHHHHHhccCCeEEEEeccchhhHHH
Q 045072 97 RLDARTISVLLQHSESKLVLVDYQSRNLVVE 127 (556)
Q Consensus 97 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 127 (556)
..+.+++...+++.+++++.........+..
T Consensus 224 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 254 (496)
T PRK06839 224 KFEPTKALSMIEKHKVTVVMGVPTIHQALIN 254 (496)
T ss_pred CCCHHHHHHHHHhhCCeEEEehHHHHHHHHh
Confidence 6788899999999999999887776555443
No 207
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=38.83 E-value=1.4e+02 Score=29.02 Aligned_cols=61 Identities=18% Similarity=0.169 Sum_probs=47.8
Q ss_pred HHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEec
Q 045072 55 SLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDY 119 (556)
Q Consensus 55 ~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 119 (556)
.|++.++++|++|+|..--+.-.+...+|-. .|+.++.++.+ ++-....++.+++.++...
T Consensus 158 alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka-~ga~Via~~~~---~~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 158 ALKKANVKPGKWVAVVGAGGLGHMAVQYAKA-MGAEVIAITRS---EEKLELAKKLGADHVINSS 218 (339)
T ss_pred ehhhcCCCCCCEEEEECCcHHHHHHHHHHHH-cCCeEEEEeCC---hHHHHHHHHhCCcEEEEcC
Confidence 4566799999999999888999999999864 45777777654 4445567889999998865
No 208
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=38.47 E-value=2.5e+02 Score=30.02 Aligned_cols=96 Identities=14% Similarity=0.040 Sum_probs=66.4
Q ss_pred CCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhh---hhhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEec-
Q 045072 186 NEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDS---LIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLR- 261 (556)
Q Consensus 186 ~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~- 261 (556)
.++.+|++.... .+| ....+|.+.+....... ....+++++|++...+|.... .....+++...|+..+.+.
T Consensus 70 ~p~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~Gav~v~i~~ 145 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPG--EVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPE-AAIAMLACARIGAIHSVVFG 145 (625)
T ss_pred CCCCeEEEEEcC-CCC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCCEEeccCC
Confidence 345666654321 122 24568888886554443 334688999999998886543 2445667778888877775
Q ss_pred CCCHHHHHHHHHHhCCcEEechhH
Q 045072 262 KFDAAVIYKMIRQHGVTHMCGAPV 285 (556)
Q Consensus 262 ~~~~~~~~~~i~~~~~t~~~~~p~ 285 (556)
.+.+.++...++..++..+++...
T Consensus 146 ~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 146 GFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCCHHHHHHHHHhcCCCEEEEcCc
Confidence 478899999999999999987654
No 209
>PLN03102 acyl-activating enzyme; Provisional
Probab=38.36 E-value=1.3e+02 Score=31.88 Aligned_cols=82 Identities=12% Similarity=0.081 Sum_probs=60.3
Q ss_pred EEchHHHHHHHhhhhh---hcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEec-CCCHHHHHHHHHHhCCcEEec
Q 045072 207 VHCHRGIFVMTVDSLI---DWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLR-KFDAAVIYKMIRQHGVTHMCG 282 (556)
Q Consensus 207 ~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 282 (556)
.+|.+.+...+..... ..++..+|++...+|-.-.+ ....++++..|+..+.+. ..+++++...++..+++.+++
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~-~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~ 117 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAM-YEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFV 117 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHH-HHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEE
Confidence 5788887655544433 35789999999888864432 334667778888887776 478899999999999999998
Q ss_pred hhHHHHH
Q 045072 283 APVVLNM 289 (556)
Q Consensus 283 ~p~~~~~ 289 (556)
.+.....
T Consensus 118 ~~~~~~~ 124 (579)
T PLN03102 118 DRSFEPL 124 (579)
T ss_pred ChhhHHH
Confidence 7765443
No 210
>PLN02246 4-coumarate--CoA ligase
Probab=37.94 E-value=2.2e+02 Score=29.75 Aligned_cols=84 Identities=13% Similarity=0.098 Sum_probs=59.9
Q ss_pred EEEchHHHHHHHhhhhh---hcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecC-CCHHHHHHHHHHhCCcEEe
Q 045072 206 VVHCHRGIFVMTVDSLI---DWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRK-FDAAVIYKMIRQHGVTHMC 281 (556)
Q Consensus 206 v~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 281 (556)
-.+|+..+...+..... ..++++++++...++-... .....++++..|+..+.+.+ ....++...++..++..++
T Consensus 49 ~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~-~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li 127 (537)
T PLN02246 49 RVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPE-FVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLII 127 (537)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChH-HHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEE
Confidence 35888888655444333 3578899999888776532 23446777778888887764 6788999999999999988
Q ss_pred chhHHHHHH
Q 045072 282 GAPVVLNMI 290 (556)
Q Consensus 282 ~~p~~~~~l 290 (556)
........+
T Consensus 128 ~~~~~~~~~ 136 (537)
T PLN02246 128 TQSCYVDKL 136 (537)
T ss_pred EccchHHHH
Confidence 876655443
No 211
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=37.54 E-value=2.6e+02 Score=30.07 Aligned_cols=95 Identities=13% Similarity=0.018 Sum_probs=66.0
Q ss_pred CCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhh---hhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEec-C
Q 045072 187 EWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSL---IDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLR-K 262 (556)
Q Consensus 187 ~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~ 262 (556)
++.+|++.... . ......+|.+.+........ ...+++++|++...++-.-.+ ....++++..|+..+.+. .
T Consensus 81 p~~~Al~~~~~--~-~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~v~l~~~ 156 (637)
T PRK00174 81 GDKVAIIWEGD--D-PGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEA-AVAMLACARIGAVHSVVFGG 156 (637)
T ss_pred CCCeEEEEECC--C-CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEecCCC
Confidence 45666654221 1 11345689998866544443 345789999999888775442 344667888888888776 4
Q ss_pred CCHHHHHHHHHHhCCcEEechhH
Q 045072 263 FDAAVIYKMIRQHGVTHMCGAPV 285 (556)
Q Consensus 263 ~~~~~~~~~i~~~~~t~~~~~p~ 285 (556)
+.+.++...+++.++..+++...
T Consensus 157 ~~~~~l~~~l~~~~~~~li~~~~ 179 (637)
T PRK00174 157 FSAEALADRIIDAGAKLVITADE 179 (637)
T ss_pred CCHHHHHHHHHhcCCcEEEEcCc
Confidence 78899999999999999987653
No 212
>COG1171 IlvA Threonine dehydratase [Amino acid transport and metabolism]
Probab=37.34 E-value=2.5e+02 Score=27.39 Aligned_cols=113 Identities=15% Similarity=0.040 Sum_probs=69.9
Q ss_pred CCCHHHHHHHHHHhcCCCCEEEECCcc--ccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 045072 13 PLTPLGFLERAATVYGDCPSIIYNNLI--YTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAI 90 (556)
Q Consensus 13 ~~t~~~~l~~~~~~~p~~~a~~~~~~~--~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (556)
..|+........++...++.+-..+.+ -+|+ +.-.-+++.+ |...+-++.-.|+--..|+- --..|||-++|..
T Consensus 24 ~~TPL~~s~~Ls~~~g~~v~lK~E~lQ~~gSFK-~RGA~n~i~~-Ls~e~~~~~gViaaSaGNHa--QGvA~aa~~lGi~ 99 (347)
T COG1171 24 NPTPLQRSPSLSERLGAEIYLKRENLQPVGSFK-IRGAYNKLSS-LSEEEERAAGVIAASAGNHA--QGVAYAAKRLGIK 99 (347)
T ss_pred cCCCcccchhhHHhhCceEEEeeccCcccccch-hhhHHHHHHh-cChhhhhcCceEEecCCcHH--HHHHHHHHHhCCC
Confidence 344444444455555666777666522 2222 2223344444 44221122223444455554 4567899999998
Q ss_pred EeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHH
Q 045072 91 LNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAI 129 (556)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~ 129 (556)
.+.+=|..++..-..-.+..++.+++++..+.+....+.
T Consensus 100 a~IvMP~~tp~~Kv~a~r~~GaeVil~g~~~dda~~~a~ 138 (347)
T COG1171 100 ATIVMPETTPKIKVDATRGYGAEVILHGDNFDDAYAAAE 138 (347)
T ss_pred EEEEecCCCcHHHHHHHHhcCCEEEEECCCHHHHHHHHH
Confidence 888888888888888999999999999988776655544
No 213
>PRK10717 cysteine synthase A; Provisional
Probab=37.25 E-value=2.1e+02 Score=27.72 Aligned_cols=64 Identities=14% Similarity=0.068 Sum_probs=46.9
Q ss_pred HHHcC-CCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEecc
Q 045072 56 LSSIG-ITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQ 120 (556)
Q Consensus 56 L~~~g-~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 120 (556)
+.+.| +++|+.|.- +..+-.-..+.++|.++|..+..+-|....+.....++..++++++++..
T Consensus 55 a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~~ 119 (330)
T PRK10717 55 AEKRGLLKPGGTIVE-GTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPAA 119 (330)
T ss_pred HHHcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCc
Confidence 33445 467776544 56666677777788889988877767666667788999999999998753
No 214
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=36.99 E-value=1.7e+02 Score=26.37 Aligned_cols=59 Identities=12% Similarity=0.165 Sum_probs=41.2
Q ss_pred CCCHHHHHHHHHHhCCcEEechhHHHHHHHc------CCCCCCCCCCeEEEEeCCCCcHHHHHHh
Q 045072 262 KFDAAVIYKMIRQHGVTHMCGAPVVLNMISN------LPRSEPLRNPVHILTAGAPPPAAVLFRT 320 (556)
Q Consensus 262 ~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~------~~~~~~l~~l~~v~~~g~~~~~~~~~~~ 320 (556)
...++.+....++++++.+.++..+-..+.. ..+...++..-.+..||+|++.+..+.+
T Consensus 141 dvP~e~fve~a~e~k~d~v~~SalMTttm~~~~~viE~L~eeGiRd~v~v~vGGApvtq~~a~~i 205 (227)
T COG5012 141 DVPVEEFVEKAKELKPDLVSMSALMTTTMIGMKDVIELLKEEGIRDKVIVMVGGAPVTQDWADKI 205 (227)
T ss_pred CCCHHHHHHHHHHcCCcEEechHHHHHHHHHHHHHHHHHHHcCCccCeEEeecCccccHHHHHHh
Confidence 4678999999999999999887655333322 2223445555567779999998866554
No 215
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=36.95 E-value=1.5e+02 Score=31.03 Aligned_cols=86 Identities=17% Similarity=0.246 Sum_probs=59.5
Q ss_pred cccHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCChHHH-HHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEE
Q 045072 39 IYTWSQTHRRCLQLASSLS-SIGITRGHVVSVVAPNIPAM-YEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVL 116 (556)
Q Consensus 39 ~~Ty~~l~~~~~~la~~L~-~~g~~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 116 (556)
.+|...+...+ .+..+. ..++.++|++..+.|-...+ ....++++..|+..+...+..+.+.+...+++.++..+.
T Consensus 195 ~~s~~~~~~~~--~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~ 272 (539)
T PRK07008 195 LYSHRSTVLHA--YGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSA 272 (539)
T ss_pred EEecHHHHHHH--HHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEE
Confidence 46666654322 222232 35788899988777654332 333477788999988777777899999999999999988
Q ss_pred EeccchhhHH
Q 045072 117 VDYQSRNLVV 126 (556)
Q Consensus 117 ~~~~~~~~~~ 126 (556)
........+.
T Consensus 273 ~~P~~~~~l~ 282 (539)
T PRK07008 273 GVPTVWLGLL 282 (539)
T ss_pred echHHHHHHH
Confidence 8776655444
No 216
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=36.95 E-value=3.2e+02 Score=31.85 Aligned_cols=97 Identities=12% Similarity=0.095 Sum_probs=68.5
Q ss_pred cCCCCEEEECC---------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHH--HHHHHHHhhhccceEeccC
Q 045072 27 YGDCPSIIYNN---------LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPA--MYEAHFAIPFTGAILNNIN 95 (556)
Q Consensus 27 ~p~~~a~~~~~---------~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~ 95 (556)
.++.++++... -.+|.+.+...+..... ..++.++|++...+|-... +....++.+..|+..+..+
T Consensus 780 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~ 856 (1146)
T PRK08633 780 KPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISD---VFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHP 856 (1146)
T ss_pred CCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHH---hcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeC
Confidence 35666666531 34888888776655443 3467889988877775432 3344677788898888776
Q ss_pred CCCCHHHHHHHHhccCCeEEEEeccchhhHH
Q 045072 96 TRLDARTISVLLQHSESKLVLVDYQSRNLVV 126 (556)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 126 (556)
...+.+.+...+++.+++.+...+.....+.
T Consensus 857 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 887 (1146)
T PRK08633 857 DPTDALGIAKLVAKHRATILLGTPTFLRLYL 887 (1146)
T ss_pred CCCCHHHHHHHHHHcCCeEEEecHHHHHHHH
Confidence 6678899999999999999998887665444
No 217
>PRK07529 AMP-binding domain protein; Validated
Probab=36.58 E-value=2.4e+02 Score=30.34 Aligned_cols=96 Identities=13% Similarity=0.135 Sum_probs=62.5
Q ss_pred CCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhh---hhhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEec-
Q 045072 186 NEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDS---LIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLR- 261 (556)
Q Consensus 186 ~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~- 261 (556)
.++.+|++....+.. ......+|.+.+....... ....++++++++...+|-...+ ....+++...|. .+.+.
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~-~~~~lA~~~~Gi-~~pi~~ 114 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPET-HFALWGGEAAGI-ANPINP 114 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCE-EEeCCC
Confidence 345666665433211 1234568888885544333 3446889999999998875443 344556666663 33333
Q ss_pred CCCHHHHHHHHHHhCCcEEechh
Q 045072 262 KFDAAVIYKMIRQHGVTHMCGAP 284 (556)
Q Consensus 262 ~~~~~~~~~~i~~~~~t~~~~~p 284 (556)
..+++++...+++.++..++...
T Consensus 115 ~~~~~~i~~~l~~~~~~~li~~~ 137 (632)
T PRK07529 115 LLEPEQIAELLRAAGAKVLVTLG 137 (632)
T ss_pred cCCHHHHHHHHHhcCCcEEEEeC
Confidence 47889999999999999998853
No 218
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=36.34 E-value=1.9e+02 Score=29.38 Aligned_cols=51 Identities=18% Similarity=0.059 Sum_probs=20.6
Q ss_pred EEcCChHHHHH-HHHHhhhccceEeccCCCCC--HHHHHHHHhccCCeEEEEec
Q 045072 69 VVAPNIPAMYE-AHFAIPFTGAILNNINTRLD--ARTISVLLQHSESKLVLVDY 119 (556)
Q Consensus 69 i~~~~~~~~~~-~~lA~~~~G~~~v~l~~~~~--~~~l~~~l~~~~~~~vi~~~ 119 (556)
+..+++...+. +++++++.|-.++.-++.+. ..-+...+...++++.+++.
T Consensus 80 v~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~ 133 (432)
T PRK06702 80 VATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP 133 (432)
T ss_pred EEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence 33444444433 23344455543333333332 12222334555555555543
No 219
>PF02729 OTCace_N: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; InterPro: IPR006132 This entry contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and may also play a role in trimerization of the molecules []. The carboxyl-terminal, aspartate/ornithine-binding domain is is described by IPR006131 from INTERPRO. ; GO: 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 2P2G_D 2I6U_A 2YFK_B 3D6N_B 3SDS_A 3GD5_A 3R7L_B 3R7F_A 3R7D_A ....
Probab=36.33 E-value=2.5e+02 Score=23.29 Aligned_cols=88 Identities=9% Similarity=0.023 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHc---CCCCCCEEEE-EcCChHHHHHHH-HHhhhccceEeccCCCCC-------HHHHHHHHhccC
Q 045072 44 QTHRRCLQLASSLSSI---GITRGHVVSV-VAPNIPAMYEAH-FAIPFTGAILNNINTRLD-------ARTISVLLQHSE 111 (556)
Q Consensus 44 ~l~~~~~~la~~L~~~---g~~~gd~V~i-~~~~~~~~~~~~-lA~~~~G~~~v~l~~~~~-------~~~l~~~l~~~~ 111 (556)
.|.+.+..+.....+. ..-.|..|++ +..++...-++| .|+.++|+.++.+++..+ .++...+|...
T Consensus 16 ~ll~~A~~lk~~~~~~~~~~~l~gk~v~~lF~e~StRTR~SFe~A~~~LGg~~i~~~~~~s~~~k~Esl~Dtar~ls~~- 94 (142)
T PF02729_consen 16 ALLDLAKELKAAPKKGKPSQLLKGKTVALLFFEPSTRTRLSFEAAANRLGGHVIYLDPSTSSLGKGESLEDTARVLSRY- 94 (142)
T ss_dssp HHHHHHHHHHHHHHTTCCTTTTTTCEEEEEESS--HHHHHHHHHHHHHTTCEEEEEETTTSSTTTSSEHHHHHHHHHHH-
T ss_pred HHHHHHHHHHhhhhcCCCcccCCCCEEEEEecCCCchhhhhHHHhhhcceeEEEEECcccccCcCCCCHHHHHHHHHHh-
Confidence 4445555555555543 3556666665 567777766665 899999999999986543 35666788888
Q ss_pred CeEEEEeccchhhHHHHHhcC
Q 045072 112 SKLVLVDYQSRNLVVEAISLF 132 (556)
Q Consensus 112 ~~~vi~~~~~~~~~~~~~~~~ 132 (556)
++++++-......+.+.....
T Consensus 95 ~D~iv~R~~~~~~~~~~a~~~ 115 (142)
T PF02729_consen 95 VDAIVIRHPSHGALEELAEHS 115 (142)
T ss_dssp CSEEEEEESSHHHHHHHHHHC
T ss_pred hheEEEEeccchHHHHHHHhc
Confidence 777777655556666655543
No 220
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=36.28 E-value=2.3e+02 Score=31.01 Aligned_cols=91 Identities=12% Similarity=0.092 Sum_probs=62.3
Q ss_pred CCCCEEEEC--C-------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChH--HHHHHHHHhhhccceEeccCC
Q 045072 28 GDCPSIIYN--N-------LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIP--AMYEAHFAIPFTGAILNNINT 96 (556)
Q Consensus 28 p~~~a~~~~--~-------~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~ 96 (556)
++.+|++.. | -.+|++.+...+..+.. ..++.++|++...+|-.. .+...+++.+..|+..+..+.
T Consensus 364 ~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~~ 440 (718)
T PRK08043 364 PEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKT---IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPS 440 (718)
T ss_pred CCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH---hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeCC
Confidence 456666542 1 35888888776655543 347889999988887533 344567788889998886654
Q ss_pred CCCHHHHHHHHhccCCeEEEEeccc
Q 045072 97 RLDARTISVLLQHSESKLVLVDYQS 121 (556)
Q Consensus 97 ~~~~~~l~~~l~~~~~~~vi~~~~~ 121 (556)
......+...+++.++..+......
T Consensus 441 ~~~~~~~~~~i~~~~vt~~~~~p~~ 465 (718)
T PRK08043 441 PLHYRIVPELVYDRNCTVLFGTSTF 465 (718)
T ss_pred cccHHHHHHHHHhcCCeEEEchHHH
Confidence 4455666778888999888765543
No 221
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=35.80 E-value=88 Score=24.59 Aligned_cols=41 Identities=20% Similarity=0.172 Sum_probs=33.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 045072 50 LQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAI 90 (556)
Q Consensus 50 ~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (556)
..+...+...|+.+++.|.++|.++.....+...+..+|..
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 45667778889999999999999988877777777888863
No 222
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=35.47 E-value=3.2e+02 Score=29.54 Aligned_cols=79 Identities=10% Similarity=-0.065 Sum_probs=58.8
Q ss_pred EEEchHHHHHHHhhhh---hhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEec-CCCHHHHHHHHHHhCCcEEe
Q 045072 206 VVHCHRGIFVMTVDSL---IDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLR-KFDAAVIYKMIRQHGVTHMC 281 (556)
Q Consensus 206 v~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 281 (556)
..+|.+.+........ ...+++++|++...+|..-.+ ....+++...|+..+.+. .+.++++...+++.++..++
T Consensus 113 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~-~~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li 191 (652)
T TIGR01217 113 APVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQA-VVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLF 191 (652)
T ss_pred eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEE
Confidence 4578888865444433 345899999999998885442 344667778888877776 47889999999999999998
Q ss_pred chhH
Q 045072 282 GAPV 285 (556)
Q Consensus 282 ~~p~ 285 (556)
+...
T Consensus 192 ~~~~ 195 (652)
T TIGR01217 192 TVDG 195 (652)
T ss_pred Eccc
Confidence 7543
No 223
>PRK05852 acyl-CoA synthetase; Validated
Probab=35.23 E-value=2.6e+02 Score=29.17 Aligned_cols=87 Identities=11% Similarity=0.088 Sum_probs=61.3
Q ss_pred ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChH--HHHHHHHHhhhccceEecc-CCCCCHHHHHHHHhccCCeE
Q 045072 38 LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIP--AMYEAHFAIPFTGAILNNI-NTRLDARTISVLLQHSESKL 114 (556)
Q Consensus 38 ~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l-~~~~~~~~l~~~l~~~~~~~ 114 (556)
-.+|++.+...+..+...+ +++++|++....|... .++..+++++..|...+.- ....+...+...+++.++..
T Consensus 194 v~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~ 270 (534)
T PRK05852 194 VPWTHANIASSVRAIITGY---RLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATW 270 (534)
T ss_pred EEecHHHHHHHHHHHHHHh---CCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcE
Confidence 3478888877666655443 6788998887776544 3556678888777765432 23456788889999999999
Q ss_pred EEEeccchhhHHH
Q 045072 115 VLVDYQSRNLVVE 127 (556)
Q Consensus 115 vi~~~~~~~~~~~ 127 (556)
++..+.....+..
T Consensus 271 ~~~~P~~~~~l~~ 283 (534)
T PRK05852 271 YTAVPTIHQILLE 283 (534)
T ss_pred EEcChHHHHHHHh
Confidence 9888776655443
No 224
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=35.14 E-value=3.7e+02 Score=28.04 Aligned_cols=86 Identities=9% Similarity=0.020 Sum_probs=62.6
Q ss_pred ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHH---HHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeE
Q 045072 38 LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMY---EAHFAIPFTGAILNNINTRLDARTISVLLQHSESKL 114 (556)
Q Consensus 38 ~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~---~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (556)
-.+|.+.+...+..... ..++.++|++...+|-...+- ...++++..|+..+.. +..+.......+++.++.+
T Consensus 200 V~~s~~~l~~~~~~~~~---~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~~~~l~~~~~t~ 275 (536)
T PRK10946 200 IPRTHNDYYYSVRRSVE---ICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLA-PDPSATLCFPLIEKHQVNV 275 (536)
T ss_pred EEEehHHHHHHHHHHHH---hcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEEC-CCCCHHHHHHHHHHhCCcE
Confidence 44888888886665433 357889999988877654332 2467888899887765 4556777888999999999
Q ss_pred EEEeccchhhHHH
Q 045072 115 VLVDYQSRNLVVE 127 (556)
Q Consensus 115 vi~~~~~~~~~~~ 127 (556)
+.........+..
T Consensus 276 ~~~~p~~~~~l~~ 288 (536)
T PRK10946 276 TALVPPAVSLWLQ 288 (536)
T ss_pred EEeChHHHHHHHh
Confidence 9888776655543
No 225
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=34.84 E-value=52 Score=23.33 Aligned_cols=30 Identities=17% Similarity=0.265 Sum_probs=17.0
Q ss_pred ccHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Q 045072 40 YTWSQTHRRCLQLASSLSSIGITRGHVVSV 69 (556)
Q Consensus 40 ~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i 69 (556)
+.|-+-.-+..-+-..|++.|+++||.|-|
T Consensus 33 ~~rf~~~L~~~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 33 LRRFQRKLKKMGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp HHHHHHHHHHTTHHHHHHTTT--TT-EEEE
T ss_pred HHHHHHHHHHCCHHHHHHHcCCCCCCEEEE
Confidence 333333334445556788899999999876
No 226
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=34.41 E-value=1.6e+02 Score=29.24 Aligned_cols=61 Identities=16% Similarity=0.224 Sum_probs=32.4
Q ss_pred HHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCC-----CCHHHHHHHHhccCCeEEE
Q 045072 52 LASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTR-----LDARTISVLLQHSESKLVL 116 (556)
Q Consensus 52 la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi 116 (556)
+...|...++++||.|.+-.+.... ...++...|+.++.++-+ .+.+.+...+.. +.++|+
T Consensus 61 l~lal~al~~~~Gd~Viv~~~~~~~---~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 61 MHITLMALGIGPGDEVITPSLTWVS---TLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHcCCCCCCEEEECCCcHHH---HHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 3334455567777776655443322 233445567776665432 345666666543 445554
No 227
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=34.35 E-value=2e+02 Score=27.35 Aligned_cols=89 Identities=13% Similarity=0.054 Sum_probs=56.2
Q ss_pred CCEEEECCccccHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHh
Q 045072 30 CPSIIYNNLIYTWSQTHRRCLQLASSLSSIG-ITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQ 108 (556)
Q Consensus 30 ~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g-~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~ 108 (556)
++.+-..+..-|-.-=.+.+..+.....+.| +.+|+.|.- ...+-.-....++|...|..+..+-|..........++
T Consensus 24 ~i~~K~E~~nptGS~K~R~a~~~v~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~ 102 (290)
T TIGR01138 24 EVWLKLEGNNPAGSVKDRPALSMIVEAEKRGEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMR 102 (290)
T ss_pred eEEEEEccCCCCccHHHHHHHHHHHHHHHcCCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHH
Confidence 4444444433332222222333333344445 477776544 56666677777888889988887777666666778899
Q ss_pred ccCCeEEEEec
Q 045072 109 HSESKLVLVDY 119 (556)
Q Consensus 109 ~~~~~~vi~~~ 119 (556)
..++++++++.
T Consensus 103 ~~GA~v~~v~~ 113 (290)
T TIGR01138 103 AYGAELILVTK 113 (290)
T ss_pred HcCCEEEEeCC
Confidence 99999999875
No 228
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=33.46 E-value=78 Score=29.91 Aligned_cols=52 Identities=10% Similarity=0.061 Sum_probs=42.3
Q ss_pred cccHHHHHHH-----HHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 045072 39 IYTWSQTHRR-----CLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAI 90 (556)
Q Consensus 39 ~~Ty~~l~~~-----~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (556)
.+.|.++... ...+...|.+.|+.+++.|.++|.++...-.+++++-.+|..
T Consensus 201 ~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 201 NVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 3667777632 456667778889999999999999999999999999889975
No 229
>PRK05857 acyl-CoA synthetase; Validated
Probab=33.35 E-value=2.4e+02 Score=29.54 Aligned_cols=80 Identities=13% Similarity=-0.021 Sum_probs=59.0
Q ss_pred EEEchHHHHHHHhhhhh---hcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecC-CCHHHHHHHHHHhCCcEEe
Q 045072 206 VVHCHRGIFVMTVDSLI---DWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRK-FDAAVIYKMIRQHGVTHMC 281 (556)
Q Consensus 206 v~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 281 (556)
..+|.+.+...+..... ..++++++++...++....+ +...++++..|+..+.++. ..++++...++..++..++
T Consensus 40 ~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~-~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii 118 (540)
T PRK05857 40 SALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPET-YLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAAL 118 (540)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEE
Confidence 35788888655444333 45788999998888765443 4446777888888887764 7888999999999999988
Q ss_pred chhHH
Q 045072 282 GAPVV 286 (556)
Q Consensus 282 ~~p~~ 286 (556)
..+..
T Consensus 119 ~~~~~ 123 (540)
T PRK05857 119 VAPGS 123 (540)
T ss_pred Eeccc
Confidence 87754
No 230
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=32.98 E-value=2.2e+02 Score=25.53 Aligned_cols=90 Identities=13% Similarity=0.081 Sum_probs=55.0
Q ss_pred CCEEEEecCh-hhhhhchhhhH-hHhcCcEeEEec-CCCHHHHHHHHHHhCCcEEechhHH---H---HHHHcCCCCCCC
Q 045072 229 QPVYLWTLPM-FHANGWSYPWG-MAAVGGTNVCLR-KFDAAVIYKMIRQHGVTHMCGAPVV---L---NMISNLPRSEPL 299 (556)
Q Consensus 229 ~~~~~~~~pl-~~~~g~~~~~~-~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~---~---~~l~~~~~~~~l 299 (556)
..+++.+.+- .|..|....-. .-..|-.++.+. ...++++.+.+.+++++++..+-.. + ..+.+..+....
T Consensus 89 ~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~~ 168 (213)
T cd02069 89 GKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRGI 168 (213)
T ss_pred CeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcCC
Confidence 3445555554 67777654333 334566666665 5788999999999999997665332 1 111111111211
Q ss_pred CCCeEEEEeCCCCcHHHHHHh
Q 045072 300 RNPVHILTAGAPPPAAVLFRT 320 (556)
Q Consensus 300 ~~l~~v~~~g~~~~~~~~~~~ 320 (556)
. -.++.||.+++.+..+..
T Consensus 169 -~-~~i~vGG~~~~~~~~~~~ 187 (213)
T cd02069 169 -K-IPLLIGGAATSRKHTAVK 187 (213)
T ss_pred -C-CeEEEEChhcCHHHHhhh
Confidence 2 337889999998887653
No 231
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=32.97 E-value=3e+02 Score=26.19 Aligned_cols=68 Identities=15% Similarity=0.073 Sum_probs=49.0
Q ss_pred HHHHHHHH----cC-CCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEec
Q 045072 51 QLASSLSS----IG-ITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDY 119 (556)
Q Consensus 51 ~la~~L~~----~g-~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 119 (556)
|.|.++.+ .| +++|+ ..|=...+---+...+.|...|..++.+=|..-..+.+.+|+..++.++++..
T Consensus 44 R~A~~mI~~Ae~~G~l~pG~-tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 44 RIALYMIEDAEKRGLLKPGG-TIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHHHHHHHHHHHcCCCCCCC-EEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 44554443 45 78898 44444455556667777788899888877766666668899999999999987
No 232
>PRK12483 threonine dehydratase; Reviewed
Probab=32.97 E-value=2.8e+02 Score=28.98 Aligned_cols=61 Identities=11% Similarity=0.005 Sum_probs=45.7
Q ss_pred EEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHH
Q 045072 69 VVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAI 129 (556)
Q Consensus 69 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~ 129 (556)
|.+..+-......++|..+|..+..+=|...+......++..++.++++.....+....+.
T Consensus 89 V~aSaGNha~gvA~aA~~lGi~~~IvmP~~tp~~Kv~~~r~~GAeVil~g~~~d~a~~~A~ 149 (521)
T PRK12483 89 ITASAGNHAQGVALAAARLGVKAVIVMPRTTPQLKVDGVRAHGGEVVLHGESFPDALAHAL 149 (521)
T ss_pred EEECCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHH
Confidence 4555566777778888999988887777766666778899999999999876555444443
No 233
>PLN02356 phosphateglycerate kinase
Probab=32.82 E-value=2.7e+02 Score=28.17 Aligned_cols=68 Identities=15% Similarity=0.048 Sum_probs=48.0
Q ss_pred HHHHHHHHHcCC-CCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEe
Q 045072 50 LQLASSLSSIGI-TRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVD 118 (556)
Q Consensus 50 ~~la~~L~~~g~-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 118 (556)
..+-..+.+.|. ++|..|. ....+-.-+...++|...|..+..+-|.....+....++..++.++.++
T Consensus 89 ~~~i~~a~~~g~~~~~g~Vv-eaSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~ 157 (423)
T PLN02356 89 VKIIEEALESGQLFPGGVVT-EGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVR 157 (423)
T ss_pred HHHHHHHHhCCccCCCCEEE-EeCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEEC
Confidence 333334444454 3666544 4555666788888889999888877777666666789999999999885
No 234
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=32.71 E-value=2.1e+02 Score=28.38 Aligned_cols=65 Identities=14% Similarity=0.181 Sum_probs=39.8
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCC-----CCCHHHHHHHHhc---cCCeEEEE
Q 045072 50 LQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINT-----RLDARTISVLLQH---SESKLVLV 117 (556)
Q Consensus 50 ~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~---~~~~~vi~ 117 (556)
..+...+...++++||.|.+-.+... ...-++...|+.++.++. ..+.+.+...+++ -+.++|+.
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~~~---~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~ 127 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPITFV---ATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVP 127 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcchH---HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEE
Confidence 44444555567888998777665433 334555677877776543 2466777777763 35566653
No 235
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=32.71 E-value=1e+02 Score=26.66 Aligned_cols=25 Identities=24% Similarity=0.373 Sum_probs=21.3
Q ss_pred hHHHHHHHhcCCCccccEEEeecCC
Q 045072 456 SVEVESVLYTNPAVNEAAVVARPDE 480 (556)
Q Consensus 456 ~~~ie~~l~~~~~i~~~~v~~~~~~ 480 (556)
...|+..+.+.++|.++.|+...+.
T Consensus 77 a~~i~~~v~~~~~V~~A~vvv~~~~ 101 (177)
T PF09580_consen 77 ADRIANRVKKVPGVEDATVVVTDDN 101 (177)
T ss_pred HHHHHHHHhcCCCceEEEEEEECCE
Confidence 4678888899999999999998654
No 236
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=32.68 E-value=3.2e+02 Score=28.05 Aligned_cols=85 Identities=7% Similarity=0.004 Sum_probs=61.0
Q ss_pred ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHH-HHHHHHHhhhccceEeccCCC--CCHHHHHHHHhccCCeE
Q 045072 38 LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPA-MYEAHFAIPFTGAILNNINTR--LDARTISVLLQHSESKL 114 (556)
Q Consensus 38 ~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~--~~~~~l~~~l~~~~~~~ 114 (556)
-.+|+..+...+..+... .++..++++....|.+.. .+..+++++..|+..+..++. .+...+...++..++..
T Consensus 159 v~~s~~~~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 235 (502)
T TIGR01734 159 VQISHDNLVSFTNWMLAD---FPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNV 235 (502)
T ss_pred EEEecHHHHHHHHHHHHh---CCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeE
Confidence 358888887665544333 578888888777665433 345677889999999887654 35678888899999998
Q ss_pred EEEeccchhhH
Q 045072 115 VLVDYQSRNLV 125 (556)
Q Consensus 115 vi~~~~~~~~~ 125 (556)
+...+...+.+
T Consensus 236 ~~~~p~~~~~~ 246 (502)
T TIGR01734 236 WVSTPSFVDMC 246 (502)
T ss_pred EEEChhHHHHH
Confidence 88887765543
No 237
>PRK08813 threonine dehydratase; Provisional
Probab=32.62 E-value=3.5e+02 Score=26.50 Aligned_cols=58 Identities=7% Similarity=-0.105 Sum_probs=43.4
Q ss_pred EEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhH
Q 045072 68 SVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLV 125 (556)
Q Consensus 68 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 125 (556)
.+....+-.-....++|..+|..+..+=|...+......++..++.++.+..+..+..
T Consensus 84 VV~aSsGN~G~alA~aa~~~Gi~~~IvvP~~~~~~K~~~i~~~GAeVv~~g~~~~~a~ 141 (349)
T PRK08813 84 VICASAGNHAQGVAWSAYRLGVQAITVMPHGAPQTKIAGVAHWGATVRQHGNSYDEAY 141 (349)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECCCHHHHH
Confidence 3556667777788889999998877766666666677788999999999977654443
No 238
>COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain [General function prediction only]
Probab=32.61 E-value=1.4e+02 Score=26.26 Aligned_cols=57 Identities=18% Similarity=0.165 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEecc
Q 045072 43 SQTHRRCLQLASSLSS-IGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQ 120 (556)
Q Consensus 43 ~~l~~~~~~la~~L~~-~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 120 (556)
....++.+-++.++.+ +++++||.+.+++. .|..++|+ ++....++-+++++.++.-
T Consensus 83 ss~lErieg~~~~~l~~~~i~~~DVliviSn--------------SGrNpvpi-------e~A~~~rekGa~vI~vTSl 140 (243)
T COG4821 83 SSYLERIEGYAKLFLHRLQIRPNDVLIVISN--------------SGRNPVPI-------EVAEYAREKGAKVIAVTSL 140 (243)
T ss_pred cchhHhhhhHHHHHHHHhcCCCCCEEEEEeC--------------CCCCCcch-------HHHHHHHhcCCeEEEEehh
Confidence 3345677778877665 79999998887776 57677766 3566778888988887653
No 239
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=32.34 E-value=2.9e+02 Score=29.94 Aligned_cols=85 Identities=11% Similarity=-0.101 Sum_probs=62.9
Q ss_pred EEEchHHHHHHHhhhh---hhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecC-CCHHHHHHHHHHhCCcEEe
Q 045072 206 VVHCHRGIFVMTVDSL---IDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRK-FDAAVIYKMIRQHGVTHMC 281 (556)
Q Consensus 206 v~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 281 (556)
..+|.+.+...+.... ...+++++|++...++-...+ +...++++..|+..+.+.+ ..++++...+++.++++++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~ 154 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEW-IIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAF 154 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEE
Confidence 4578888765544433 345789999998888875442 3445778888888887764 6789999999999999999
Q ss_pred chhHHHHHHH
Q 045072 282 GAPVVLNMIS 291 (556)
Q Consensus 282 ~~p~~~~~l~ 291 (556)
+....+..+.
T Consensus 155 ~~~~~~~~~~ 164 (660)
T PLN02861 155 VQESKISSIL 164 (660)
T ss_pred ECHHHHHHHH
Confidence 8776665553
No 240
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=32.24 E-value=6e+02 Score=26.44 Aligned_cols=96 Identities=8% Similarity=0.032 Sum_probs=65.1
Q ss_pred cCCCCEEEECC---------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHH--HHHHHHHhhhccceEeccC
Q 045072 27 YGDCPSIIYNN---------LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPA--MYEAHFAIPFTGAILNNIN 95 (556)
Q Consensus 27 ~p~~~a~~~~~---------~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~ 95 (556)
.++.+|++... -.+|.+.+...+.... ...+++.+|++...+|-... ++...+..+..|...+. .
T Consensus 193 ~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~-~ 268 (538)
T TIGR03208 193 SPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYA---ERLELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVL-Q 268 (538)
T ss_pred CCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHH---hhcCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEe-c
Confidence 45666665521 3477777766544433 33467889998888876543 44556777778877654 4
Q ss_pred CCCCHHHHHHHHhccCCeEEEEeccchhhHH
Q 045072 96 TRLDARTISVLLQHSESKLVLVDYQSRNLVV 126 (556)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 126 (556)
+..+...+...+++.++..+.........+.
T Consensus 269 ~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~ 299 (538)
T TIGR03208 269 DIWNPARAAELIRETGVTFTMASTPFLTDLC 299 (538)
T ss_pred CccCHHHHHHHHHHhCCeEEecCHHHHHHHH
Confidence 5678899999999999999887766554443
No 241
>PRK07798 acyl-CoA synthetase; Validated
Probab=32.09 E-value=3.8e+02 Score=27.71 Aligned_cols=85 Identities=5% Similarity=-0.164 Sum_probs=59.2
Q ss_pred EEEchHHHHHHHhhh---hhhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecC-CCHHHHHHHHHHhCCcEEe
Q 045072 206 VVHCHRGIFVMTVDS---LIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRK-FDAAVIYKMIRQHGVTHMC 281 (556)
Q Consensus 206 v~~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 281 (556)
-.+|...+....... ....+++.++++...++-... .....++++..|+..+.+++ ....++...+++.++..++
T Consensus 27 ~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~-~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~ 105 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIE-YVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALV 105 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEE
Confidence 357888775443333 334578889998887765333 23445677788888777764 6788999999999999998
Q ss_pred chhHHHHHHH
Q 045072 282 GAPVVLNMIS 291 (556)
Q Consensus 282 ~~p~~~~~l~ 291 (556)
........+.
T Consensus 106 ~~~~~~~~~~ 115 (533)
T PRK07798 106 YEREFAPRVA 115 (533)
T ss_pred EchhhHHHHH
Confidence 8876655543
No 242
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=32.08 E-value=6.8e+02 Score=27.07 Aligned_cols=101 Identities=5% Similarity=-0.124 Sum_probs=67.1
Q ss_pred EEEchHHHHHHHhhhh---hhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEec-CCCHHHHHHHHHHhCCcEEe
Q 045072 206 VVHCHRGIFVMTVDSL---IDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLR-KFDAAVIYKMIRQHGVTHMC 281 (556)
Q Consensus 206 v~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 281 (556)
..+|.+.+...+.... ...+++++|++...++-...+ ....+++...|+..+.+. ...++++...++..+++.++
T Consensus 75 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~ 153 (660)
T PLN02430 75 MWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQW-IVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVF 153 (660)
T ss_pred EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEE
Confidence 3468887765544433 345889999998887775442 233567778888877776 47889999999999999999
Q ss_pred chhHHHHHHHcCCCCCCCCCCeEEEEe
Q 045072 282 GAPVVLNMISNLPRSEPLRNPVHILTA 308 (556)
Q Consensus 282 ~~p~~~~~l~~~~~~~~l~~l~~v~~~ 308 (556)
.....+..++... ....+.++.++.-
T Consensus 154 ~~~~~~~~~~~~~-~~~~~~l~~ii~~ 179 (660)
T PLN02430 154 VQDKKIKELLEPD-CKSAKRLKAIVSF 179 (660)
T ss_pred ECHHHHHHHHhhh-cccCCCceEEEEE
Confidence 8876544443221 1123345665554
No 243
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=32.07 E-value=1.4e+02 Score=29.39 Aligned_cols=89 Identities=20% Similarity=0.224 Sum_probs=53.2
Q ss_pred HHHHHHHH-HHhcCCCCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEecc
Q 045072 16 PLGFLERA-ATVYGDCPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNI 94 (556)
Q Consensus 16 ~~~~l~~~-~~~~p~~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 94 (556)
..+.|++. ++....+-++...+ ....+-..|...|+++||.|++-.- .+....-|++.+|+.++.+
T Consensus 26 ~~~~fE~~~a~~~g~~~~~~~~s----------gt~Al~~al~~l~~~~gdeVi~p~~---t~~~~~~ai~~~G~~pv~~ 92 (363)
T PF01041_consen 26 YVEEFEKEFAEYFGVKYAVAVSS----------GTSALHLALRALGLGPGDEVIVPAY---TFPATASAILWAGAEPVFV 92 (363)
T ss_dssp HHHHHHHHHHHHHTSSEEEEESS----------HHHHHHHHHHHTTGGTTSEEEEESS---S-THHHHHHHHTT-EEEEE
T ss_pred HHHHHHHHHHHHhCCCeEEEeCC----------hhHHHHHHHHhcCCCcCceEecCCC---cchHHHHHHHHhccEEEEE
Confidence 33444333 33345555555544 2344555677789999998887644 4555666777899999987
Q ss_pred CCC-----CCHHHHHHHHhccCCeEEEEe
Q 045072 95 NTR-----LDARTISVLLQHSESKLVLVD 118 (556)
Q Consensus 95 ~~~-----~~~~~l~~~l~~~~~~~vi~~ 118 (556)
+-+ .+.+.+...++.-. ++|+..
T Consensus 93 Di~~~~~~id~~~~~~~i~~~t-~ai~~~ 120 (363)
T PF01041_consen 93 DIDPETLNIDPEALEKAITPKT-KAILVV 120 (363)
T ss_dssp -BETTTSSB-HHHHHHHHHTTE-EEEEEE
T ss_pred eccCCcCCcCHHHHHHHhccCc-cEEEEe
Confidence 654 46688888776443 555543
No 244
>PRK08526 threonine dehydratase; Provisional
Probab=31.96 E-value=3.4e+02 Score=27.26 Aligned_cols=60 Identities=7% Similarity=-0.131 Sum_probs=44.4
Q ss_pred EEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHH
Q 045072 69 VVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEA 128 (556)
Q Consensus 69 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 128 (556)
+.+..+-......++|..+|..+..+=|...+......++..++.++++.....+....+
T Consensus 72 V~aSaGNhg~avA~aa~~~Gi~~~IvmP~~~p~~k~~~~r~~GA~Vv~~g~~~~~a~~~a 131 (403)
T PRK08526 72 IAASAGNHAQGVAISAKKFGIKAVIVMPEATPLLKVSGTKALGAEVILKGDNYDEAYAFA 131 (403)
T ss_pred EEECccHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHhCCCEEEEECCCHHHHHHHH
Confidence 346666677778888999998888777766665556778999999999987655544443
No 245
>PRK13388 acyl-CoA synthetase; Provisional
Probab=31.79 E-value=3.7e+02 Score=28.13 Aligned_cols=83 Identities=11% Similarity=-0.059 Sum_probs=59.7
Q ss_pred EEchHHHHHHHhhhhh---hcCC-CCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecC-CCHHHHHHHHHHhCCcEEe
Q 045072 207 VHCHRGIFVMTVDSLI---DWSI-PKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRK-FDAAVIYKMIRQHGVTHMC 281 (556)
Q Consensus 207 ~~t~~~~~~~~~~~~~---~~~~-~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 281 (556)
.+|...+......... ..++ .+++++...++-...+ ....++++..|+..+.+++ ...+++...+++.+++.++
T Consensus 26 ~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~-v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i 104 (540)
T PRK13388 26 TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEM-LFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLV 104 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHH-HHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEE
Confidence 6788888665544433 3466 6888888888764442 3346778888888887764 6778999999999999999
Q ss_pred chhHHHHHH
Q 045072 282 GAPVVLNMI 290 (556)
Q Consensus 282 ~~p~~~~~l 290 (556)
........+
T Consensus 105 ~~~~~~~~~ 113 (540)
T PRK13388 105 TDAEHRPLL 113 (540)
T ss_pred EChhhhHHH
Confidence 876655433
No 246
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=31.64 E-value=5.5e+02 Score=25.85 Aligned_cols=69 Identities=9% Similarity=-0.032 Sum_probs=52.7
Q ss_pred HHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEecc--CCCCCHHHHHHHHhccCCeEEEEeccchh
Q 045072 55 SLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNI--NTRLDARTISVLLQHSESKLVLVDYQSRN 123 (556)
Q Consensus 55 ~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l--~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 123 (556)
.+.+..--.|-+|+.+.+-.++..+.+..+..+|+.+... +|..+.++....|.+.+..++-...+..+
T Consensus 23 ~~~~~~pl~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a~~~~~~~ 93 (406)
T TIGR00936 23 RFSEEKPLKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFAWRGETNE 93 (406)
T ss_pred HHhccCCCCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEEecCCCHH
Confidence 3333344568899999999999999999999999986655 77777888888899989986654444333
No 247
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=31.48 E-value=5.2e+02 Score=26.42 Aligned_cols=85 Identities=7% Similarity=0.016 Sum_probs=60.7
Q ss_pred ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHH-HHHHHHhhhccceEeccCCC--CCHHHHHHHHhccCCeE
Q 045072 38 LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAM-YEAHFAIPFTGAILNNINTR--LDARTISVLLQHSESKL 114 (556)
Q Consensus 38 ~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~~--~~~~~l~~~l~~~~~~~ 114 (556)
..+|++.+...+..++.. .++..++++....|-+... +...++.+..|...+..+.. .+...+...++..++..
T Consensus 161 v~~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~ 237 (503)
T PRK04813 161 VQISHDNLVSFTNWMLED---FALPEGPQFLNQAPYSFDLSVMDLYPTLASGGTLVALPKDMTANFKQLFETLPQLPINV 237 (503)
T ss_pred EEeehHHHHHHHHHHHHH---cCCCcCceeeecCCcchhHhHHHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCeE
Confidence 458898888766655544 5678888877777655432 44566788899988877653 35677888899999998
Q ss_pred EEEeccchhhH
Q 045072 115 VLVDYQSRNLV 125 (556)
Q Consensus 115 vi~~~~~~~~~ 125 (556)
+.........+
T Consensus 238 ~~~~p~~~~~~ 248 (503)
T PRK04813 238 WVSTPSFADMC 248 (503)
T ss_pred EEeChHHHHHH
Confidence 88877665543
No 248
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=31.45 E-value=1.1e+02 Score=23.37 Aligned_cols=51 Identities=6% Similarity=-0.188 Sum_probs=37.6
Q ss_pred ccHHHHHHH----HHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 045072 40 YTWSQTHRR----CLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAI 90 (556)
Q Consensus 40 ~Ty~~l~~~----~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (556)
+.+.++.+. ...+...+...+..+++.|.++|.++.....+...+..+|..
T Consensus 38 ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 38 IPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred echHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 566665443 235666777778888899999999988877777777888864
No 249
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=31.39 E-value=2.7e+02 Score=28.46 Aligned_cols=67 Identities=7% Similarity=-0.016 Sum_probs=48.2
Q ss_pred HHHHHHHcCC-CCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEec
Q 045072 52 LASSLSSIGI-TRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDY 119 (556)
Q Consensus 52 la~~L~~~g~-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 119 (556)
+-....+.|. .+|+.|.- +..+-.-....++|.++|..+..+-|...+......++..++++++++.
T Consensus 49 ~l~~a~~~g~~~~g~~vv~-~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 116 (454)
T TIGR01137 49 MIEDAEASGRLKPGDTIIE-PTSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPT 116 (454)
T ss_pred HHHHHHHcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCC
Confidence 3333444454 67776544 4667777777888999998888776755556677888999999999875
No 250
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=31.38 E-value=3.3e+02 Score=28.16 Aligned_cols=83 Identities=10% Similarity=-0.023 Sum_probs=59.8
Q ss_pred EEchHHHHHHHhhhhh---hcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEec-CCCHHHHHHHHHHhCCcEEec
Q 045072 207 VHCHRGIFVMTVDSLI---DWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLR-KFDAAVIYKMIRQHGVTHMCG 282 (556)
Q Consensus 207 ~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 282 (556)
.+|...+......... ..++.+++++....+....+ ....++++..|+..+.+. ..+++++...+++.+++.++.
T Consensus 37 ~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~-~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~ 115 (517)
T PRK08008 37 RYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEF-IFCWFGLAKIGAIMVPINARLLREESAWILQNSQASLLVT 115 (517)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEE
Confidence 4677777554444333 45788999998887765443 234567778888877776 478899999999999999998
Q ss_pred hhHHHHHH
Q 045072 283 APVVLNMI 290 (556)
Q Consensus 283 ~p~~~~~l 290 (556)
.+.....+
T Consensus 116 ~~~~~~~~ 123 (517)
T PRK08008 116 SAQFYPMY 123 (517)
T ss_pred ecchhHHH
Confidence 87655443
No 251
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=31.28 E-value=3e+02 Score=28.96 Aligned_cols=82 Identities=9% Similarity=-0.019 Sum_probs=59.7
Q ss_pred EEEchHHHHHHHhhhhhh----cCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecC-CCHHHHHHHHHHhCCcEE
Q 045072 206 VVHCHRGIFVMTVDSLID----WSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRK-FDAAVIYKMIRQHGVTHM 280 (556)
Q Consensus 206 v~~t~~~~~~~~~~~~~~----~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~~ 280 (556)
..+|+..+.......... .++..++++...++....+ ....++++..|+..+.+++ .+..++...+++.++..+
T Consensus 48 ~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~-~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~i 126 (562)
T PRK05677 48 KTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQY-PVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKAL 126 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEE
Confidence 357888886655444432 3788999999888875442 3446778888888887764 678899999999999999
Q ss_pred echhHHHH
Q 045072 281 CGAPVVLN 288 (556)
Q Consensus 281 ~~~p~~~~ 288 (556)
+.......
T Consensus 127 i~~~~~~~ 134 (562)
T PRK05677 127 VCLANMAH 134 (562)
T ss_pred EEecchhh
Confidence 87665443
No 252
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=31.00 E-value=2.9e+02 Score=27.39 Aligned_cols=59 Identities=8% Similarity=-0.064 Sum_probs=44.0
Q ss_pred EEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHH
Q 045072 68 SVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVV 126 (556)
Q Consensus 68 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 126 (556)
.+.+..+-......++|...|..+..+=|...+......++..++.+++++....+...
T Consensus 51 vv~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~a~~ 109 (380)
T TIGR01127 51 VVAASAGNHAQGVAYAAKKFGIKAVIVMPESAPPSKVKATKSYGAEVILHGDDYDEAYA 109 (380)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCcHHHHHHHHHCCCEEEEECCCHHHHHH
Confidence 44455566667777888999988887777776777788899999999998765444433
No 253
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=30.89 E-value=2.1e+02 Score=30.13 Aligned_cols=83 Identities=10% Similarity=-0.028 Sum_probs=60.9
Q ss_pred EEchHHHHHHHhhhh---hhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEec-CCCHHHHHHHHHHhCCcEEec
Q 045072 207 VHCHRGIFVMTVDSL---IDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLR-KFDAAVIYKMIRQHGVTHMCG 282 (556)
Q Consensus 207 ~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 282 (556)
.+|+..+...+.... ...+++.+|++....+-... .....++++..|+..+.+. ..++.++...+++.++..++.
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 135 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQ-HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIV 135 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEe
Confidence 478888755444433 34578899999888777544 2344677778888887776 478899999999999999998
Q ss_pred hhHHHHHH
Q 045072 283 APVVLNMI 290 (556)
Q Consensus 283 ~p~~~~~l 290 (556)
.......+
T Consensus 136 ~~~~~~~~ 143 (573)
T PRK05605 136 WDKVAPTV 143 (573)
T ss_pred chhhHHHH
Confidence 77765544
No 254
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=30.82 E-value=3.8e+02 Score=23.71 Aligned_cols=88 Identities=17% Similarity=0.195 Sum_probs=51.4
Q ss_pred CCEEEEecCh-hhhhhchhhhHhH-hcCcEeEEec-CCCHHHHHHHHHHhCCcEEechhHH------HHHHHcCCCCCCC
Q 045072 229 QPVYLWTLPM-FHANGWSYPWGMA-AVGGTNVCLR-KFDAAVIYKMIRQHGVTHMCGAPVV------LNMISNLPRSEPL 299 (556)
Q Consensus 229 ~~~~~~~~pl-~~~~g~~~~~~~~-~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~------~~~l~~~~~~~~l 299 (556)
..+++.+.+- .|..|....-..+ ..|-.++.+. ..+++++.+.+.+.+++++..+-+. +..+.+..+....
T Consensus 83 ~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~ 162 (201)
T cd02070 83 GKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGL 162 (201)
T ss_pred CeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCC
Confidence 3445555554 6777765543334 4566655554 5688999999999999987655321 2222222111111
Q ss_pred CCCeEEEEeCCCCcHHH
Q 045072 300 RNPVHILTAGAPPPAAV 316 (556)
Q Consensus 300 ~~l~~v~~~g~~~~~~~ 316 (556)
..--.++.||.+++.+.
T Consensus 163 ~~~~~i~vGG~~~~~~~ 179 (201)
T cd02070 163 RDKVKVMVGGAPVNQEF 179 (201)
T ss_pred CcCCeEEEECCcCCHHH
Confidence 11234788888888753
No 255
>PLN02574 4-coumarate--CoA ligase-like
Probab=30.69 E-value=3.8e+02 Score=28.18 Aligned_cols=84 Identities=14% Similarity=0.051 Sum_probs=59.8
Q ss_pred EEchHHHHHHHhhh---hhh-cCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecC-CCHHHHHHHHHHhCCcEEe
Q 045072 207 VHCHRGIFVMTVDS---LID-WSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRK-FDAAVIYKMIRQHGVTHMC 281 (556)
Q Consensus 207 ~~t~~~~~~~~~~~---~~~-~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 281 (556)
.+|...+...+... ... .+++++|++....+-... .....++++..|+..+.+.+ ....++...+++.++..++
T Consensus 66 ~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~-~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~ 144 (560)
T PLN02574 66 SISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVY-FPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAF 144 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcch-HHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEE
Confidence 36777775443333 333 678999999988876433 23445777788888877764 6788999999999999998
Q ss_pred chhHHHHHHH
Q 045072 282 GAPVVLNMIS 291 (556)
Q Consensus 282 ~~p~~~~~l~ 291 (556)
..+..+..+.
T Consensus 145 ~~~~~~~~~~ 154 (560)
T PLN02574 145 TSPENVEKLS 154 (560)
T ss_pred ECHHHHHHHH
Confidence 8877665543
No 256
>PRK05850 acyl-CoA synthetase; Validated
Probab=30.66 E-value=5.2e+02 Score=27.20 Aligned_cols=83 Identities=10% Similarity=-0.005 Sum_probs=58.7
Q ss_pred EEEchHHHHHHHhhhhh---hcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecC----CCHHHHHHHHHHhCCc
Q 045072 206 VVHCHRGIFVMTVDSLI---DWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRK----FDAAVIYKMIRQHGVT 278 (556)
Q Consensus 206 v~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t 278 (556)
..+|+..+...+..... ..+ .++|++...++... ......++++..|+..+.+++ ....++...+++.++.
T Consensus 34 ~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~-~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~ 111 (578)
T PRK05850 34 ETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGL-EYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPS 111 (578)
T ss_pred eeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcc-cHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCC
Confidence 46888887554433332 334 56889888888643 234456778888888888863 3567899999999999
Q ss_pred EEechhHHHHHH
Q 045072 279 HMCGAPVVLNMI 290 (556)
Q Consensus 279 ~~~~~p~~~~~l 290 (556)
.++..+.....+
T Consensus 112 ~il~~~~~~~~~ 123 (578)
T PRK05850 112 VVLTTSAVVDDV 123 (578)
T ss_pred EEEEcHHHHHHH
Confidence 999988766554
No 257
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=30.56 E-value=2.2e+02 Score=29.80 Aligned_cols=84 Identities=6% Similarity=-0.072 Sum_probs=60.9
Q ss_pred EEchHHHHHHHhhhh---hhc-CCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecC-CCHHHHHHHHHHhCCcEEe
Q 045072 207 VHCHRGIFVMTVDSL---IDW-SIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRK-FDAAVIYKMIRQHGVTHMC 281 (556)
Q Consensus 207 ~~t~~~~~~~~~~~~---~~~-~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 281 (556)
.+|+..+........ ... ++..++++...++... ..+...++++..|+..+.+.+ ..+.++...+++.+++.++
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 113 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSP-QFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAI 113 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCh-HHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEE
Confidence 478887755443333 233 8889999988877643 334456778888888887764 6789999999999999999
Q ss_pred chhHHHHHHH
Q 045072 282 GAPVVLNMIS 291 (556)
Q Consensus 282 ~~p~~~~~l~ 291 (556)
..+.....+.
T Consensus 114 ~~~~~~~~~~ 123 (546)
T PRK08314 114 VGSELAPKVA 123 (546)
T ss_pred EccchhhhHH
Confidence 8877655443
No 258
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=30.52 E-value=3.9e+02 Score=28.00 Aligned_cols=97 Identities=13% Similarity=0.078 Sum_probs=70.8
Q ss_pred cCCCCEEEEC--C-------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHH--HHHHHHHhhhccceEeccC
Q 045072 27 YGDCPSIIYN--N-------LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPA--MYEAHFAIPFTGAILNNIN 95 (556)
Q Consensus 27 ~p~~~a~~~~--~-------~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~ 95 (556)
.++.+|++.. | ..+|++.+...+..+...+... +++.|++...+|-... +...+++.+..|+..+...
T Consensus 169 ~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~-~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~ 247 (534)
T COG0318 169 DPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGG-LTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLS 247 (534)
T ss_pred CCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhccc-CCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCC
Confidence 3677777653 1 4589999998876666666542 7888887888776654 4666788889998888876
Q ss_pred C-CCCHHHHHHHHhccCCeEEEEeccchhh
Q 045072 96 T-RLDARTISVLLQHSESKLVLVDYQSRNL 124 (556)
Q Consensus 96 ~-~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 124 (556)
+ ..+++.+...+.+.++..+..-+.....
T Consensus 248 ~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ 277 (534)
T COG0318 248 PEPFDPEEVLWLIEKYKVTVLSGVPTFLRE 277 (534)
T ss_pred CCCcCHHHHHHHHHHhcceEEecchHHHHH
Confidence 5 6888888888888887777766655444
No 259
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=30.40 E-value=3.4e+02 Score=28.85 Aligned_cols=81 Identities=10% Similarity=-0.013 Sum_probs=58.1
Q ss_pred ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHH--HHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEE
Q 045072 38 LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAM--YEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLV 115 (556)
Q Consensus 38 ~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~--~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 115 (556)
-.+|.+.+...+..+... .++.++|++...+|-...+ ...+++.+..|+..+. .+..+...+...+++.++.++
T Consensus 217 V~~sh~~l~~~~~~~~~~---~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~-~~~~~~~~~~~~i~~~~~t~~ 292 (600)
T PRK08279 217 AVMSHMRWLKAMGGFGGL---LRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLAL-RRKFSASRFWDDVRRYRATAF 292 (600)
T ss_pred EEEeHHHHHHHHHHHHHh---cCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEE-cCCCCHHHHHHHHHHhcceEE
Confidence 458888888777665544 5788999998888765543 3445566667776655 566788888889999999988
Q ss_pred EEeccch
Q 045072 116 LVDYQSR 122 (556)
Q Consensus 116 i~~~~~~ 122 (556)
.......
T Consensus 293 ~~~p~l~ 299 (600)
T PRK08279 293 QYIGELC 299 (600)
T ss_pred eehHHHH
Confidence 7655443
No 260
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=30.21 E-value=2.5e+02 Score=30.11 Aligned_cols=94 Identities=13% Similarity=0.038 Sum_probs=64.8
Q ss_pred CCCcEEEEeccCCCCCCceEEEchHHHHHHHhhh---hhhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEec-C
Q 045072 187 EWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDS---LIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLR-K 262 (556)
Q Consensus 187 ~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~ 262 (556)
++.+|++.. +..+|. .-.+|.+.+...+... ....+++++|++...+|..-. .....+++...|+..+.+. .
T Consensus 66 p~~~Al~~~-~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e-~v~~~lA~~~~Gav~vpl~~~ 141 (628)
T TIGR02316 66 GEQLALVTV-SSETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAE-AVFAMLACARIGAIHSVVFGG 141 (628)
T ss_pred CCCeEEEEE-cCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHhCCEEEecCCC
Confidence 446665543 222222 2457888886544433 344689999999999887533 3445677888888877775 4
Q ss_pred CCHHHHHHHHHHhCCcEEechh
Q 045072 263 FDAAVIYKMIRQHGVTHMCGAP 284 (556)
Q Consensus 263 ~~~~~~~~~i~~~~~t~~~~~p 284 (556)
+.+.++...++..++..+++..
T Consensus 142 ~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 142 FASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CCHHHHHHHHHhcCceEEEECC
Confidence 7889999999999999988754
No 261
>PF03744 BioW: 6-carboxyhexanoate--CoA ligase; InterPro: IPR005499 This family contains the enzyme 6-carboxyhexanoate--CoA ligase 6.2.1.14 from EC. This enzyme is involved in the first step of biotin synthesis, where it converts pimelate into pimeloyl-CoA []. The enzyme requires magnesium as a cofactor and forms a homodimer [].; GO: 0009102 biotin biosynthetic process
Probab=30.02 E-value=87 Score=28.49 Aligned_cols=38 Identities=24% Similarity=0.404 Sum_probs=23.0
Q ss_pred eeeEEEEecCCccccccCCCCccccCcCCCCceecCceEEEe----------cCCcEEEEccC
Q 045072 391 SLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIH----------ADGYLEIKDRS 443 (556)
Q Consensus 391 ~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~----------~dg~l~~~GR~ 443 (556)
.++|||+. +||+-+ .||+.+.++||.. ..|++||+.+.
T Consensus 174 iiaELC~S---------DDP~Yt------TGYVA~~~~GY~RI~~mK~~G~~~GGRvffv~~~ 221 (239)
T PF03744_consen 174 IIAELCWS---------DDPDYT------TGYVASKKFGYHRITNMKEAGSPKGGRVFFVDGS 221 (239)
T ss_pred ceEEEEec---------CCCCCc------eEEEEeCCcceEECccccccCCCCCCEEEEEeCC
Confidence 68999987 344433 5666666666542 23667765443
No 262
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=29.95 E-value=3e+02 Score=29.45 Aligned_cols=100 Identities=16% Similarity=0.100 Sum_probs=73.2
Q ss_pred hcCCCCEEEEC---------CccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHH-HHhhhccceEeccC
Q 045072 26 VYGDCPSIIYN---------NLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAH-FAIPFTGAILNNIN 95 (556)
Q Consensus 26 ~~p~~~a~~~~---------~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~-lA~~~~G~~~v~l~ 95 (556)
..||-+|.+.. |.-+||+-|..++..+...+. -++++|++.-++|-..-+=-++ .++...|.+.+...
T Consensus 188 ~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~--~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~~~ 265 (613)
T COG1022 188 PKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP--PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVLFK 265 (613)
T ss_pred CCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC--CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEEec
Confidence 45677776553 145999999999988887776 4789999999999776555554 55555555555443
Q ss_pred CCCCHHHHHHHHhccCCeEEEEeccchhhHHHHH
Q 045072 96 TRLDARTISVLLQHSESKLVLVDYQSRNLVVEAI 129 (556)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~ 129 (556)
.+...+..-+++.+|.+++.=+-..+.+....
T Consensus 266 --~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I 297 (613)
T COG1022 266 --EDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGI 297 (613)
T ss_pred --CCHHHHHHHHHHhCCeEEeechHHHHHHHHHH
Confidence 45788999999999999998777666666543
No 263
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=29.94 E-value=1.9e+02 Score=27.99 Aligned_cols=104 Identities=12% Similarity=-0.046 Sum_probs=58.7
Q ss_pred CHHHHHHHHHHhcC-CCCEEEECC--ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceE
Q 045072 15 TPLGFLERAATVYG-DCPSIIYNN--LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAIL 91 (556)
Q Consensus 15 t~~~~l~~~~~~~p-~~~a~~~~~--~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 91 (556)
|+.-.+.+.++... .++.+-..+ ..=||+ .+.+..+...+.+.| ++.|... ..+-.-....++|...|..+
T Consensus 23 TPl~~~~~l~~~~g~~~i~~K~E~~nptGS~K--~R~a~~~l~~a~~~g---~~~vv~~-SsGN~g~alA~~a~~~G~~~ 96 (324)
T cd01563 23 TPLVRAPRLGERLGGKNLYVKDEGLNPTGSFK--DRGMTVAVSKAKELG---VKAVACA-STGNTSASLAAYAARAGIKC 96 (324)
T ss_pred CceeechhhHhhcCCCceEEEecCCCCcccHH--HhhHHHHHHHHHHcC---CCEEEEe-CCCHHHHHHHHHHHHcCCce
Confidence 44444444443332 355555544 223333 222333333344444 4455444 34445555567888899887
Q ss_pred eccCCCCCHHHHHHHHhccCCeEEEEeccchhh
Q 045072 92 NNINTRLDARTISVLLQHSESKLVLVDYQSRNL 124 (556)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 124 (556)
..+-|..........++..++++++++......
T Consensus 97 ~ivvp~~~~~~k~~~l~~~GA~Vi~~~~~~~~~ 129 (324)
T cd01563 97 VVFLPAGKALGKLAQALAYGATVLAVEGNFDDA 129 (324)
T ss_pred EEEEeCCCCHHHHHHHHHcCCEEEEECCcHHHH
Confidence 776665555666778899999999998754443
No 264
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=29.92 E-value=5.8e+02 Score=25.74 Aligned_cols=58 Identities=24% Similarity=0.245 Sum_probs=37.7
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCC---------CCH-----HHHHHHHhccC-Ce----EEEEeccc
Q 045072 61 ITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTR---------LDA-----RTISVLLQHSE-SK----LVLVDYQS 121 (556)
Q Consensus 61 ~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~---------~~~-----~~l~~~l~~~~-~~----~vi~~~~~ 121 (556)
+++||.| ++-.|+...+.. |+...|+.++.|.|. .+. +.++..|++.. ++ ++|+.+.+
T Consensus 103 ~~~gd~V-Lv~RN~HkSv~~--alil~ga~Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY 179 (417)
T PF01276_consen 103 CRPGDKV-LVDRNCHKSVYN--ALILSGAIPVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY 179 (417)
T ss_dssp TTTTCEE-EEETT--HHHHH--HHHHHTEEEEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T
T ss_pred cCCCCEE-EEcCCcHHHHHH--HHHHcCCeEEEecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC
Confidence 5789974 456666666666 999999999988884 233 77887777543 33 45565544
No 265
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=29.88 E-value=2.3e+02 Score=28.91 Aligned_cols=55 Identities=18% Similarity=0.305 Sum_probs=30.8
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCC-----CCHHHHHHHHhccCCeEEEEe
Q 045072 60 GITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTR-----LDARTISVLLQHSESKLVLVD 118 (556)
Q Consensus 60 g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 118 (556)
++++||.|.+-.+..+.. ..++...|+.+++++.. .+.+.+...+.. +.++|++.
T Consensus 107 ~~~pGd~VIv~~~t~~a~---~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 107 ALKPGDEVITVAAGFPTT---VNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred CCCCCCEEEECCCCcHHH---HHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 677788776655544333 34445567776655432 345666666543 45555543
No 266
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=29.86 E-value=85 Score=27.60 Aligned_cols=33 Identities=27% Similarity=0.618 Sum_probs=28.9
Q ss_pred ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Q 045072 38 LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVV 70 (556)
Q Consensus 38 ~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~ 70 (556)
.-+||.++++.++++|..+.+-|.+|.-.|++.
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaia 37 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRASGFKPDVIVAIA 37 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHHcCCCCCEEEEEc
Confidence 358999999999999999999999988766664
No 267
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=29.67 E-value=2.3e+02 Score=26.98 Aligned_cols=59 Identities=10% Similarity=-0.033 Sum_probs=42.6
Q ss_pred CEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhh
Q 045072 65 HVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNL 124 (556)
Q Consensus 65 d~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 124 (556)
+.|.. ...+-.-....++|...|..++.+-|..........++..++++++++.+..+.
T Consensus 66 ~~iv~-~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~~~~~~ 124 (304)
T cd01562 66 KGVVA-ASAGNHAQGVAYAAKLLGIPATIVMPETAPAAKVDATRAYGAEVVLYGEDFDEA 124 (304)
T ss_pred CcEEE-ECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCCHHHH
Confidence 34433 455666777777888899887777666656666788999999999998764433
No 268
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=29.09 E-value=68 Score=22.74 Aligned_cols=19 Identities=21% Similarity=0.389 Sum_probs=14.9
Q ss_pred HHHHHHHcCCCCCCEEEEE
Q 045072 52 LASSLSSIGITRGHVVSVV 70 (556)
Q Consensus 52 la~~L~~~g~~~gd~V~i~ 70 (556)
+-..|++.|+++||.|-|.
T Consensus 45 v~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 45 VEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred HHHHHHHcCCCCCCEEEEc
Confidence 4446777899999999874
No 269
>PRK07514 malonyl-CoA synthase; Validated
Probab=28.98 E-value=2.9e+02 Score=28.45 Aligned_cols=84 Identities=7% Similarity=0.005 Sum_probs=60.5
Q ss_pred EEEchHHHHHHHhh---hhhhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecC-CCHHHHHHHHHHhCCcEEe
Q 045072 206 VVHCHRGIFVMTVD---SLIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRK-FDAAVIYKMIRQHGVTHMC 281 (556)
Q Consensus 206 v~~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 281 (556)
..+|...+...+.. .....++.+++++....+.... .....++++..|+..+.+.+ .++.++...++..+++.++
T Consensus 27 ~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e-~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 105 (504)
T PRK07514 27 LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPE-ALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALVV 105 (504)
T ss_pred CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEE
Confidence 46788777544333 3334578899999888776532 23445778888888887764 6788999999999999998
Q ss_pred chhHHHHHH
Q 045072 282 GAPVVLNMI 290 (556)
Q Consensus 282 ~~p~~~~~l 290 (556)
..+.....+
T Consensus 106 ~~~~~~~~~ 114 (504)
T PRK07514 106 CDPANFAWL 114 (504)
T ss_pred EccchhHHH
Confidence 887665443
No 270
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=28.90 E-value=5.9e+02 Score=25.34 Aligned_cols=107 Identities=10% Similarity=0.031 Sum_probs=65.2
Q ss_pred CCCHHHHHHHHHHhcCCCCEEEEC--C-------ccccHHHHHHHHHHHHHHHHHcCCC--CCCEEEEEcCChHH--HHH
Q 045072 13 PLTPLGFLERAATVYGDCPSIIYN--N-------LIYTWSQTHRRCLQLASSLSSIGIT--RGHVVSVVAPNIPA--MYE 79 (556)
Q Consensus 13 ~~t~~~~l~~~~~~~p~~~a~~~~--~-------~~~Ty~~l~~~~~~la~~L~~~g~~--~gd~V~i~~~~~~~--~~~ 79 (556)
..++.++++-..+++-+..+++.. | -.+|++.+...+..++..+ ++. +.|++..++|-... +..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~~~dr~l~~~Pl~h~~g~~~ 155 (386)
T TIGR02372 79 RRRIGEWVDLIAHHSTPTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKIL---GERPPPVRRVISCVPAHHLYGFLF 155 (386)
T ss_pred hccHHHHHHHHHhcCCCCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHh---CcCCCCCCeEEEeCCcHHHHHHHH
Confidence 345566666555566555666552 1 4589999988888777665 443 34567777776532 344
Q ss_pred HHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhH
Q 045072 80 AHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLV 125 (556)
Q Consensus 80 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 125 (556)
.++..+.+|+..+... ..++..+...++.. ++++..+.....+
T Consensus 156 ~~l~~l~~G~~vv~~~-~~~~~~~l~~i~~~--t~~~~~P~~l~~l 198 (386)
T TIGR02372 156 SCLLPSRRGLEAKQLA-AAPASGIMRHARPG--DLIVGTPFIWEQL 198 (386)
T ss_pred HHHHHHHCCCeEEecC-CCChHHHHHhhccC--CEEEECcHHHHHH
Confidence 5566778898887664 45555555555432 5666666555444
No 271
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=28.75 E-value=1.4e+02 Score=32.48 Aligned_cols=59 Identities=10% Similarity=0.077 Sum_probs=42.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCC---------C-----HHHHHHHHhcc-CCe----EEEEeccc
Q 045072 61 ITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRL---------D-----ARTISVLLQHS-ESK----LVLVDYQS 121 (556)
Q Consensus 61 ~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~---------~-----~~~l~~~l~~~-~~~----~vi~~~~~ 121 (556)
+++||.|. +-.|+.-++.. |+...|+.++.|.|.. + .+.++..+++. +++ ++|+....
T Consensus 232 ~~~Gd~VL-vdRN~HKSv~h--aLilsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY 308 (714)
T PRK15400 232 APAGSTVL-IDRNCHKSLTH--LMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY 308 (714)
T ss_pred cCCCCEEE-eecccHHHHHH--HHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCC
Confidence 67899655 67777777666 9999999999998764 3 57777777654 233 66666544
Q ss_pred h
Q 045072 122 R 122 (556)
Q Consensus 122 ~ 122 (556)
.
T Consensus 309 d 309 (714)
T PRK15400 309 D 309 (714)
T ss_pred c
Confidence 3
No 272
>PRK13383 acyl-CoA synthetase; Provisional
Probab=28.60 E-value=2.7e+02 Score=28.85 Aligned_cols=84 Identities=10% Similarity=0.008 Sum_probs=60.1
Q ss_pred EEchHHHHHHHhhhhh---hcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecC-CCHHHHHHHHHHhCCcEEec
Q 045072 207 VHCHRGIFVMTVDSLI---DWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRK-FDAAVIYKMIRQHGVTHMCG 282 (556)
Q Consensus 207 ~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~~~~ 282 (556)
.+|...+......... ..++.+++++...++..-. .....+++...|+..+.+++ ...+++...+++.++..++.
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~-~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~ 138 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRG-FVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVA 138 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEE
Confidence 4677777554433333 3478899999888875433 23445677788888887764 68899999999999999999
Q ss_pred hhHHHHHHH
Q 045072 283 APVVLNMIS 291 (556)
Q Consensus 283 ~p~~~~~l~ 291 (556)
.+.+.+.+.
T Consensus 139 ~~~~~~~~~ 147 (516)
T PRK13383 139 DNEFAERIA 147 (516)
T ss_pred chhHHHHHH
Confidence 887665543
No 273
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=28.02 E-value=3.2e+02 Score=28.10 Aligned_cols=83 Identities=11% Similarity=0.009 Sum_probs=60.1
Q ss_pred EEchHHHHHHHhhhh---hhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecC-CCHHHHHHHHHHhCCcEEec
Q 045072 207 VHCHRGIFVMTVDSL---IDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRK-FDAAVIYKMIRQHGVTHMCG 282 (556)
Q Consensus 207 ~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~~~~ 282 (556)
.+|...+........ ...++++++++....+-... .....++++..|+..+.+++ ....++...+++.+++.++.
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~-~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~ 89 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPE-FFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIV 89 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHH-HHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEE
Confidence 467777755443333 34578899999888777543 34456788888888887764 67788999999999999988
Q ss_pred hhHHHHHH
Q 045072 283 APVVLNMI 290 (556)
Q Consensus 283 ~p~~~~~l 290 (556)
.+.....+
T Consensus 90 ~~~~~~~~ 97 (502)
T PRK08276 90 SAALADTA 97 (502)
T ss_pred ccchhhHH
Confidence 87665554
No 274
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=27.76 E-value=3.1e+02 Score=28.73 Aligned_cols=83 Identities=14% Similarity=0.017 Sum_probs=59.0
Q ss_pred EEEchHHHHHHHhhhh---hhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecC-CCHHHHHHHHHHhCCcEEe
Q 045072 206 VVHCHRGIFVMTVDSL---IDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRK-FDAAVIYKMIRQHGVTHMC 281 (556)
Q Consensus 206 v~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 281 (556)
..+|+..+...+.... ...++.+++++...++-...+ ....++++..|+..+.+.+ ....++...+++.++..++
T Consensus 54 ~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i 132 (546)
T PLN02330 54 KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEY-GIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIV 132 (546)
T ss_pred CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH-HHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEE
Confidence 3578888865544433 345788899998887765443 3445777888888776654 5778999999999999998
Q ss_pred chhHHHHH
Q 045072 282 GAPVVLNM 289 (556)
Q Consensus 282 ~~p~~~~~ 289 (556)
..+..+..
T Consensus 133 ~~~~~~~~ 140 (546)
T PLN02330 133 TNDTNYGK 140 (546)
T ss_pred Eccchhhh
Confidence 77655443
No 275
>PRK09224 threonine dehydratase; Reviewed
Probab=27.30 E-value=4.2e+02 Score=27.56 Aligned_cols=60 Identities=8% Similarity=-0.083 Sum_probs=44.3
Q ss_pred EEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHH
Q 045072 69 VVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEA 128 (556)
Q Consensus 69 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 128 (556)
|.+..+-......++|..+|..++.+=|...+......++..++.+++++....+....+
T Consensus 72 V~aSaGNha~avA~aa~~lGi~~~IvmP~~tp~~K~~~~r~~GA~Vi~~g~~~~~a~~~a 131 (504)
T PRK09224 72 ITASAGNHAQGVALSAARLGIKAVIVMPVTTPDIKVDAVRAFGGEVVLHGDSFDEAYAHA 131 (504)
T ss_pred EEECcCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHHHHHHH
Confidence 444567777777888999998887776766666666788999999999987655444433
No 276
>PF07994 NAD_binding_5: Myo-inositol-1-phosphate synthase; InterPro: IPR002587 1L-myo-Inositol-1-phosphate synthase (5.5.1.4 from EC) catalyzes the conversion of D-glucose 6-phosphate to 1L-myo-inositol-1-phosphate, the first committed step in the production of all inositol-containing compounds, including phospholipids, either directly or by salvage. The enzyme exists in a cytoplasmic form in a wide range of plants, animals, and fungi. It has also been detected in several bacteria and a chloroplast form is observed in alga and higher plants. Inositol phosphates play an important role in signal transduction. In Saccharomyces cerevisiae (Baker's yeast), the transcriptional regulation of the INO1 gene has been studied in detail [] and its expression is sensitive to the availability of phospholipid precursors as well as growth phase. The regulation of the structural gene encoding 1L-myo-inositol-1-phosphate synthase has also been analyzed at the transcriptional level in the aquatic angiosperm, Spirodela polyrrhiza (Giant duckweed) and the halophyte, Mesembryanthemum crystallinum (Common ice plant) [].; GO: 0004512 inositol-3-phosphate synthase activity, 0006021 inositol biosynthetic process, 0008654 phospholipid biosynthetic process; PDB: 1GR0_A 1P1K_B 1LA2_B 1RM0_B 1P1I_B 1JKF_A 1P1F_A 1P1J_B 1JKI_B 1P1H_A ....
Probab=27.29 E-value=3.8e+02 Score=25.55 Aligned_cols=71 Identities=17% Similarity=0.032 Sum_probs=47.8
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCCEEEEE-cCChH---------------------------HHHHHHHHhhhccceEe
Q 045072 41 TWSQTHRRCLQLASSLSSIGITRGHVVSVV-APNIP---------------------------AMYEAHFAIPFTGAILN 92 (556)
Q Consensus 41 Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~-~~~~~---------------------------~~~~~~lA~~~~G~~~v 92 (556)
.+.+..+....+..++++.|+. ..|.|. ++..+ -..+..+|+++.|+.++
T Consensus 127 ~~~~~e~~~~DI~~f~~~~~~d--~vVvvn~asTE~~~~~~~~~~~t~~~l~~al~~~~~~~~aS~~YA~AAl~~g~~fv 204 (295)
T PF07994_consen 127 KREQVEQIREDIRDFKKENGLD--RVVVVNVASTERYIPVIPGVHDTLEALEKALDENDPEISASMLYAYAALEAGVPFV 204 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-S--CEEEEE-SSCC-S---CCCCCSSHHHHHHHHHTT-TTHHHHHHHHHHHHHTTEEEE
T ss_pred hHHHHHHHHHHHHHHHHHhCCC--cEEEEECCCCCCCCCCCccccCCHHHHHHHhhcCCCcCChHHHHHHHHHHCCCCeE
Confidence 4555556677888888888763 445553 33333 34667789999999999
Q ss_pred ccCCCCCH--HHHHHHHhccCCe
Q 045072 93 NINTRLDA--RTISVLLQHSESK 113 (556)
Q Consensus 93 ~l~~~~~~--~~l~~~l~~~~~~ 113 (556)
...|+... ..+..+.++.+..
T Consensus 205 N~tP~~~a~~P~l~ela~~~gvp 227 (295)
T PF07994_consen 205 NGTPSNIADDPALVELAEEKGVP 227 (295)
T ss_dssp E-SSSTTTTSHHHHHHHHHHTEE
T ss_pred eccCccccCCHHHHHHHHHcCCC
Confidence 88887765 7777777776655
No 277
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=26.96 E-value=5.1e+02 Score=28.28 Aligned_cols=88 Identities=5% Similarity=-0.064 Sum_probs=64.0
Q ss_pred ceEEEchHHHHHHHhhhh---hhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEec-CCCHHHHHHHHHHhCCcE
Q 045072 204 KGVVHCHRGIFVMTVDSL---IDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLR-KFDAAVIYKMIRQHGVTH 279 (556)
Q Consensus 204 K~v~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~ 279 (556)
....+|++.+...+.... ...+++++|++...++-...+ ....++++..|+..+.+. ..+++++...+++.++..
T Consensus 118 ~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 196 (700)
T PTZ00216 118 ETRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRWEW-LASIYGIWSQSMVAATVYANLGEDALAYALRETECKA 196 (700)
T ss_pred CceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccE
Confidence 356788888865554433 345889999998888764332 234567777888777665 478899999999999999
Q ss_pred EechhHHHHHHHc
Q 045072 280 MCGAPVVLNMISN 292 (556)
Q Consensus 280 ~~~~p~~~~~l~~ 292 (556)
+++....+..+..
T Consensus 197 lv~~~~~~~~l~~ 209 (700)
T PTZ00216 197 IVCNGKNVPNLLR 209 (700)
T ss_pred EEECHHHHHHHHH
Confidence 9988776666544
No 278
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=26.73 E-value=5.2e+02 Score=26.96 Aligned_cols=78 Identities=15% Similarity=0.061 Sum_probs=55.6
Q ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHH--HHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEE
Q 045072 39 IYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPA--MYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVL 116 (556)
Q Consensus 39 ~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 116 (556)
.+|+..+...+.. .....++.++|++...+|-... ++..+++.+..|+..+... ..+.+.+...+++.++.+++
T Consensus 206 ~~t~~~l~~~~~~---~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 281 (547)
T PRK06087 206 MLTHNNILASERA---YCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLD-IFTPDACLALLEQQRCTCML 281 (547)
T ss_pred EEecHHHHHHHHH---HHHhcCCCCCCeEEEecchHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHcCCCEEe
Confidence 3777777655433 3344578899998887775543 4456677788898888764 46788888999999999888
Q ss_pred Eecc
Q 045072 117 VDYQ 120 (556)
Q Consensus 117 ~~~~ 120 (556)
....
T Consensus 282 ~~~~ 285 (547)
T PRK06087 282 GATP 285 (547)
T ss_pred ccHH
Confidence 6543
No 279
>PRK10877 protein disulfide isomerase II DsbC; Provisional
Probab=26.58 E-value=4.7e+02 Score=23.82 Aligned_cols=48 Identities=21% Similarity=0.153 Sum_probs=26.9
Q ss_pred CceEEEecCCcEEEEccCCCeEeeCcE-eeChHH--HHHHHhcCCCccccEEEeec
Q 045072 426 GDVGVIHADGYLEIKDRSKDVIISGGE-NLSSVE--VESVLYTNPAVNEAAVVARP 478 (556)
Q Consensus 426 GD~~~~~~dg~l~~~GR~~d~i~~~G~-~v~~~~--ie~~l~~~~~i~~~~v~~~~ 478 (556)
|.+.|.++||.+.+.|.+ +...|. .++..+ ++..+.+.+ .+..+++.+
T Consensus 55 ~~i~Y~~~dg~y~i~G~l---~d~~~~~~~~~t~~~~~~~~~~l~--~~~i~~g~~ 105 (232)
T PRK10877 55 SGVLYITDDGKHIIQGPM---YDVSGTAPVNVTNQLLLKKLNALE--KEMIVYKAP 105 (232)
T ss_pred CeEEEEcCCCCEEEeeee---EecCCCCCCChHHHHHHHHHHhhh--hhcEEecCC
Confidence 457888999999998864 444442 233322 333444444 344555544
No 280
>PRK09088 acyl-CoA synthetase; Validated
Probab=26.45 E-value=4.8e+02 Score=26.68 Aligned_cols=77 Identities=10% Similarity=-0.053 Sum_probs=56.0
Q ss_pred EEchHHHHHHHhhh---hhhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecC-CCHHHHHHHHHHhCCcEEec
Q 045072 207 VHCHRGIFVMTVDS---LIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRK-FDAAVIYKMIRQHGVTHMCG 282 (556)
Q Consensus 207 ~~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~~~~ 282 (556)
.+|...+....... ....++..++++...++-...+ +...++++..|+..+.+.+ ..+.++...+++.+++.++.
T Consensus 22 ~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~-~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~ 100 (488)
T PRK09088 22 RWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWL-VALHFACARVGAIYVPLNWRLSASELDALLQDAEPRLLLG 100 (488)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEEEE
Confidence 57888885554433 3345788899988887765442 3345777788888877764 67889999999999999987
Q ss_pred hh
Q 045072 283 AP 284 (556)
Q Consensus 283 ~p 284 (556)
..
T Consensus 101 ~~ 102 (488)
T PRK09088 101 DD 102 (488)
T ss_pred cc
Confidence 55
No 281
>PRK10595 SOS cell division inhibitor; Provisional
Probab=26.28 E-value=2.6e+02 Score=23.86 Aligned_cols=36 Identities=19% Similarity=0.059 Sum_probs=18.3
Q ss_pred HHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccc
Q 045072 54 SSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGA 89 (556)
Q Consensus 54 ~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (556)
.+|.+.|+..+..+.|...+..+.+-++-=|++.|.
T Consensus 71 ~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~ 106 (164)
T PRK10595 71 EWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGN 106 (164)
T ss_pred HHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCC
Confidence 345555555554444444445555555555555553
No 282
>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase. This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.
Probab=26.20 E-value=2.6e+02 Score=28.34 Aligned_cols=63 Identities=10% Similarity=-0.135 Sum_probs=48.2
Q ss_pred EEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHH
Q 045072 67 VSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAI 129 (556)
Q Consensus 67 V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~ 129 (556)
-.+.+..+-.-+...++|..+|..+..+=|...+......++..++.++++..+..+....+.
T Consensus 154 ~Vv~aSsGN~G~slA~~Aa~lG~~~~IvmP~~a~~~K~~~ir~~GAeVv~~~~~~~~a~~~A~ 216 (431)
T TIGR02035 154 SIAVGSTGNLGLSIGIISAALGFQVTVHMSADAKQWKKDKLRSKGVTVVEYESDYGVAVEEGR 216 (431)
T ss_pred eEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCHHHHHHHHH
Confidence 445566677777788888899988887777777777788999999999999887655544443
No 283
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=26.04 E-value=5.8e+02 Score=27.30 Aligned_cols=94 Identities=13% Similarity=0.066 Sum_probs=63.9
Q ss_pred CCCcEEEEeccCCCCCCceEEEchHHHHHHHhhh---hhhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEec-C
Q 045072 187 EWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDS---LIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLR-K 262 (556)
Q Consensus 187 ~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~ 262 (556)
++.+|++.. +..+| ..-.+|.+.+....... ....+++++|++...+|..-. .....++++..|+..+.+. .
T Consensus 67 p~~~A~~~~-~~~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~Gav~v~~~~~ 142 (629)
T PRK10524 67 PEQLALIAV-STETD--EERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAE-AAFAMLACARIGAIHSVVFGG 142 (629)
T ss_pred CCCeEEEEE-cCCCC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCcEEEeeCCC
Confidence 456665542 22222 23457888886544333 334689999999998887443 2344677778888877775 4
Q ss_pred CCHHHHHHHHHHhCCcEEechh
Q 045072 263 FDAAVIYKMIRQHGVTHMCGAP 284 (556)
Q Consensus 263 ~~~~~~~~~i~~~~~t~~~~~p 284 (556)
+.+..+...++..++..+++..
T Consensus 143 ~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 143 FASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CCHHHHHHHHHhcCCcEEEEcc
Confidence 7889999999999999998754
No 284
>PF01037 AsnC_trans_reg: AsnC family; InterPro: IPR019887 The many bacterial transcription regulation proteins which bind DNA through a 'helix-turn-helix' motif can be classified into subfamilies on the basis of sequence similarities. One such family is the AsnC/Lrp subfamily []. The Lrp family of transcriptional regulators appears to be widely distributed among bacteria and archaea, as an important regulatory system of the amino acid metabolism and related processes []. Members of the Lrp family are small DNA-binding proteins with molecular masses of around 15 kDa. Target promoters often contain a number of binding sites that typically lack obvious inverted repeat elements, and to which binding is usually co-operative. LrpA from Pyrococcus furiosus is the first Lrp-like protein to date of which a three-dimensional structure has been solved. In the crystal structure LrpA forms an octamer consisting of four dimers. The structure revealed that the N-terminal part of the protein consists of a helix-turn-helix (HTH) domain, a fold generally involved in DNA binding. The C terminus of Lrp-like proteins has a beta-fold, where the two alpha-helices are located at one side of the four-stranded antiparallel beta-sheet. LrpA forms a homodimer mainly through interactions between the beta-strands of this C-terminal domain, and an octamer through further interactions between the second alpha-helix and fourth beta-strand of the motif. Hence, the C-terminal domain of Lrp-like proteins appears to be involved in ligand-response and activation [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2DJW_F 2GQQ_A 2ZNY_E 2ZNZ_G 1RI7_A 2CYY_A 2E1C_A 2CG4_B 2DBB_B 1I1G_A ....
Probab=26.04 E-value=1.3e+02 Score=21.06 Aligned_cols=47 Identities=19% Similarity=0.121 Sum_probs=32.0
Q ss_pred eChHHHHHHHhcCCCccccEEEeecCCCCCeeeEEEEEecccccCCCCHHHHHHHHHhc
Q 045072 454 LSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRAR 512 (556)
Q Consensus 454 v~~~~ie~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~i~~~l~~~ 512 (556)
-...++.+.|.++|.|.+|..+....+ ..+.+.. .+..++.+.+.++
T Consensus 10 ~~~~~~~~~l~~~p~V~~~~~vtG~~d-----~~~~v~~-------~d~~~l~~~i~~~ 56 (74)
T PF01037_consen 10 DAYDEFAEALAEIPEVVECYSVTGEYD-----LILKVRA-------RDMEELEEFIREK 56 (74)
T ss_dssp THHHHHHHHHHTSTTEEEEEEESSSSS-----EEEEEEE-------SSHHHHHHHHHHT
T ss_pred chHHHHHHHHHcCCCEEEEEEEeCCCC-----EEEEEEE-------CCHHHHHHHHHHH
Confidence 346788899999999999999876543 5555554 3455555555443
No 285
>PRK07787 acyl-CoA synthetase; Validated
Probab=26.00 E-value=3.4e+02 Score=27.64 Aligned_cols=83 Identities=11% Similarity=-0.001 Sum_probs=59.4
Q ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCh--HHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEE
Q 045072 39 IYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNI--PAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVL 116 (556)
Q Consensus 39 ~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 116 (556)
.+|++.+...+..++.. .++.++|++...+|-. .-++..+++.+..|+..+... ..+...+...++ .++..+.
T Consensus 147 ~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~-~~~t~~~ 221 (471)
T PRK07787 147 VLSRRAIAADLDALAEA---WQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG-RPTPEAYAQALS-EGGTLYF 221 (471)
T ss_pred EEeHHHHHHHHHHHHHh---cCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC-CCCHHHHHHHHh-hCceEEE
Confidence 47888887766555543 4678899876666532 334566788899999988764 467888999999 8998888
Q ss_pred EeccchhhHH
Q 045072 117 VDYQSRNLVV 126 (556)
Q Consensus 117 ~~~~~~~~~~ 126 (556)
..+.....+.
T Consensus 222 ~~P~~~~~l~ 231 (471)
T PRK07787 222 GVPTVWSRIA 231 (471)
T ss_pred cchHHHHHHH
Confidence 7776554433
No 286
>PRK08638 threonine dehydratase; Validated
Probab=25.86 E-value=3.8e+02 Score=26.10 Aligned_cols=58 Identities=7% Similarity=-0.039 Sum_probs=43.3
Q ss_pred EEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhH
Q 045072 68 SVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLV 125 (556)
Q Consensus 68 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 125 (556)
.+....+-.-....++|...|..+..+-|..........++..++++++++....+..
T Consensus 78 vv~~SsGN~g~alA~~aa~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~ 135 (333)
T PRK08638 78 VVACSAGNHAQGVALSCALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHGDNFNDTI 135 (333)
T ss_pred EEEeCCcHHHHHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEEECcCHHHHH
Confidence 3444556667777888899998888777766666777889999999999976544443
No 287
>TIGR01747 diampropi_NH3ly diaminopropionate ammonia-lyase family. This small subfamily includes diaminopropionate ammonia-lyase from Salmonella typhimurium and a small number of close homologs, about 50 % identical in sequence. The enzyme is a pyridoxal phosphate-binding homodimer homologous to threonine dehydratase (threonine deaminase).
Probab=25.73 E-value=6.7e+02 Score=24.91 Aligned_cols=111 Identities=14% Similarity=0.040 Sum_probs=68.4
Q ss_pred CCCHHHHHHHHHHhcC-CCCEEEECCcc---ccHHHHHHHHHHHHHHHHHc----------------CCC--CCCEEEEE
Q 045072 13 PLTPLGFLERAATVYG-DCPSIIYNNLI---YTWSQTHRRCLQLASSLSSI----------------GIT--RGHVVSVV 70 (556)
Q Consensus 13 ~~t~~~~l~~~~~~~p-~~~a~~~~~~~---~Ty~~l~~~~~~la~~L~~~----------------g~~--~gd~V~i~ 70 (556)
..|..-.+...++... .++.+-..+.+ -||+..-.... ++..+.+. .++ .|.+-.+.
T Consensus 21 ~~TPL~~~~~l~~~~g~~~v~~K~E~~~~~tgSFK~RG~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~ 99 (376)
T TIGR01747 21 RPTPLCALDHLANLLGLKKILVKDESKRFGLNAFKMLGGSYA-IAQYLAEKLHLDIETLSFEHLKNDAIGEKMGQATFAT 99 (376)
T ss_pred CCCCCcchHHHHHHhCCCcEEEeeCCCCCCCCChHHHHHHHH-HHHHHHHHhCCCcccCCHHHHhhhHHHhhcCCCEEEE
Confidence 4455555555565555 46777666543 36665543333 55544421 111 12344555
Q ss_pred cCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhh
Q 045072 71 APNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNL 124 (556)
Q Consensus 71 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 124 (556)
...+-.-....++|..+|..+..+-|...+......++..++.+++++....+.
T Consensus 100 aSsGN~g~a~A~~Aa~~G~~~~I~vP~~~~~~k~~~i~~~GAeVi~v~~~~~~a 153 (376)
T TIGR01747 100 ATDGNHGRGVAWAAQQLGQKAVVYMPKGSAQERVENILNLGAECTITDMNYDDT 153 (376)
T ss_pred ECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHHH
Confidence 666667777778888999887776665555666777889999999998754443
No 288
>PRK08162 acyl-CoA synthetase; Validated
Probab=25.48 E-value=2.7e+02 Score=29.06 Aligned_cols=83 Identities=16% Similarity=0.093 Sum_probs=61.2
Q ss_pred EEchHHHHHHHhhhhh---hcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecC-CCHHHHHHHHHHhCCcEEec
Q 045072 207 VHCHRGIFVMTVDSLI---DWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRK-FDAAVIYKMIRQHGVTHMCG 282 (556)
Q Consensus 207 ~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~~~~ 282 (556)
.+|...+......... ..++..++++...++-...+ ....++++..|+..+.+++ .+..++...+++.+++.++.
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~ 121 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAM-VEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIV 121 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH-HHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEE
Confidence 5888888665544443 34788999998888775432 3446677778887777764 67899999999999999998
Q ss_pred hhHHHHHH
Q 045072 283 APVVLNMI 290 (556)
Q Consensus 283 ~p~~~~~l 290 (556)
.+.....+
T Consensus 122 ~~~~~~~~ 129 (545)
T PRK08162 122 DTEFAEVA 129 (545)
T ss_pred ccchhhHH
Confidence 88765544
No 289
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=25.44 E-value=2.9e+02 Score=29.00 Aligned_cols=82 Identities=10% Similarity=0.011 Sum_probs=59.7
Q ss_pred EEchHHHHHHHhhhhh----hcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecC-CCHHHHHHHHHHhCCcEEe
Q 045072 207 VHCHRGIFVMTVDSLI----DWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRK-FDAAVIYKMIRQHGVTHMC 281 (556)
Q Consensus 207 ~~t~~~~~~~~~~~~~----~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 281 (556)
.+|+..+......... ..++++++++..+++....+ ....++++..|+..+.+++ +...++...+++.+++.++
T Consensus 50 ~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi 128 (560)
T PRK08751 50 TITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQY-PIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLV 128 (560)
T ss_pred eeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH-HHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEE
Confidence 4788887655444332 35788999998887775442 3446777888888887764 6788999999999999999
Q ss_pred chhHHHHH
Q 045072 282 GAPVVLNM 289 (556)
Q Consensus 282 ~~p~~~~~ 289 (556)
........
T Consensus 129 ~~~~~~~~ 136 (560)
T PRK08751 129 VIDNFGTT 136 (560)
T ss_pred EcchhHHH
Confidence 87665443
No 290
>PRK08246 threonine dehydratase; Provisional
Probab=25.34 E-value=5.1e+02 Score=24.82 Aligned_cols=61 Identities=13% Similarity=0.023 Sum_probs=43.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhh
Q 045072 63 RGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNL 124 (556)
Q Consensus 63 ~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 124 (556)
+++.|. ....+-.-....++|..+|..+..+-|....+.....++..++++++++....+.
T Consensus 67 ~~~~vv-~aSsGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~ 127 (310)
T PRK08246 67 PAAGVV-AASGGNAGLAVAYAAAALGVPATVFVPETAPPAKVARLRALGAEVVVVGAEYADA 127 (310)
T ss_pred cCCeEE-EeCCCHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEeCCCHHHH
Confidence 455544 4455666777778888999887777666666667789999999999998754433
No 291
>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia. D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.
Probab=25.30 E-value=2.9e+02 Score=27.76 Aligned_cols=61 Identities=10% Similarity=-0.103 Sum_probs=46.7
Q ss_pred EEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHH
Q 045072 67 VSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVE 127 (556)
Q Consensus 67 V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 127 (556)
-.+....+-.-+...++|...|..+..+=|...+......++..++.++.++.+..+....
T Consensus 136 ~VV~aSsGN~G~alA~~a~~~G~~~~IvvP~~~~~~K~~~ira~GAeVv~v~~~~~~a~~~ 196 (404)
T cd06447 136 SIAVGSTGNLGLSIGIMAAALGFKVTVHMSADAKQWKKDKLRSKGVTVVEYETDYSKAVEE 196 (404)
T ss_pred EEEEECccHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEECCCHHHHHHH
Confidence 3455666777788888999999888877777777777888899999999998765544433
No 292
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=25.28 E-value=1.4e+02 Score=28.86 Aligned_cols=53 Identities=9% Similarity=0.011 Sum_probs=42.1
Q ss_pred ccHHHHHHH------HHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEe
Q 045072 40 YTWSQTHRR------CLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILN 92 (556)
Q Consensus 40 ~Ty~~l~~~------~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (556)
+.|.++... ...+...+.+.|+.+++.|.++|.++......++++-.+|..-+
T Consensus 239 ip~~~~~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~~v 297 (320)
T PLN02723 239 VPFPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKTDV 297 (320)
T ss_pred cCHHHhcCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCe
Confidence 666665432 46677778888999999999999999999888999999997533
No 293
>PRK05638 threonine synthase; Validated
Probab=25.00 E-value=2.4e+02 Score=28.74 Aligned_cols=61 Identities=10% Similarity=-0.071 Sum_probs=41.7
Q ss_pred CEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHH
Q 045072 65 HVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVV 126 (556)
Q Consensus 65 d~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 126 (556)
+.|+. ...+-.-....++|.++|..+..+-|...+......++..+++++.++....+...
T Consensus 113 ~~vv~-aSsGN~g~alA~~aa~~G~~~~i~vp~~~~~~k~~~~~~~GA~vi~v~~~~~~~~~ 173 (442)
T PRK05638 113 NGFIV-ASDGNAAASVAAYSARAGKEAFVVVPRKVDKGKLIQMIAFGAKIIRYGESVDEAIE 173 (442)
T ss_pred CEEEE-eCCChHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHhcCcEEEEECCCHHHHHH
Confidence 34444 55566666666677788987776666555566677889999999999766544433
No 294
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=24.98 E-value=5.5e+02 Score=23.66 Aligned_cols=98 Identities=14% Similarity=0.115 Sum_probs=63.2
Q ss_pred HHHHHHHhcCCCCEEEECC-----ccccHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCChHHHHHHHHHhhhccceEe
Q 045072 19 FLERAATVYGDCPSIIYNN-----LIYTWSQTHRRCLQLASSLSSIG-ITRGHVVSVVAPNIPAMYEAHFAIPFTGAILN 92 (556)
Q Consensus 19 ~l~~~~~~~p~~~a~~~~~-----~~~Ty~~l~~~~~~la~~L~~~g-~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (556)
-+.+.+.++++.+.|.=.| ++..+.++...-..++..|.+.+ ..+.+.|.+=+|.++.-+.- -++..+-.+.+
T Consensus 67 ~W~~~~~~~~~g~~~LPfG~l~~~~~~~~~~l~~~~~~l~~~l~~l~~~~~~~~iliD~P~g~~~~~~-~al~~aD~vL~ 145 (243)
T PF06564_consen 67 DWQQAAYRYSDGVDFLPFGQLTEAEREAFEQLAQDPQWLARALAALKALGPYDWILIDTPPGPSPYTR-QALAAADLVLV 145 (243)
T ss_pred CHHHHhhccCCCCEEEcCCCCCHHHHHHHHHhhcCHHHHHHHHHHHhccCCCCEEEEeCCCCCcHHHH-HHHHhCCeEEE
Confidence 3466677788888887655 45677777777888889998877 66778888888887643332 25555666777
Q ss_pred ccCCCCC-HHHHHHHHhccCCeEEEE
Q 045072 93 NINTRLD-ARTISVLLQHSESKLVLV 117 (556)
Q Consensus 93 ~l~~~~~-~~~l~~~l~~~~~~~vi~ 117 (556)
.+.|+.. -.++...--..+..++|-
T Consensus 146 V~~~Da~s~~~L~q~~l~~~~~~liN 171 (243)
T PF06564_consen 146 VVNPDAASHARLHQRALPAGHRFLIN 171 (243)
T ss_pred EeCCCHHHHHHHHHhcccCCcEEEEe
Confidence 7766543 344443323344544443
No 295
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=24.90 E-value=3e+02 Score=28.74 Aligned_cols=74 Identities=15% Similarity=0.075 Sum_probs=57.2
Q ss_pred cccHHHHHHHHHHHHH-HHHHcCCCCCCEEEEEcC--ChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEE
Q 045072 39 IYTWSQTHRRCLQLAS-SLSSIGITRGHVVSVVAP--NIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLV 115 (556)
Q Consensus 39 ~~Ty~~l~~~~~~la~-~L~~~g~~~gd~V~i~~~--~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 115 (556)
.+|+..... .|. .....|+++.|+|-+.+| ++.-.++-+-+|+..|+++| |....|+..+-.-..+.+++++
T Consensus 261 vith~r~~~----~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~V-lrkKFSAS~FW~DC~k~~~Tv~ 335 (649)
T KOG1179|consen 261 VITHLRYLQ----GAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVV-LRKKFSASNFWDDCRKYNVTVI 335 (649)
T ss_pred HHHHHHHHH----HHHHHHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEE-EecccchhhhHHHHHHhCCeee
Confidence 366655544 444 334468999999988876 55667888899999998866 6799999999998999999976
Q ss_pred EE
Q 045072 116 LV 117 (556)
Q Consensus 116 i~ 117 (556)
-.
T Consensus 336 QY 337 (649)
T KOG1179|consen 336 QY 337 (649)
T ss_pred eh
Confidence 53
No 296
>PF00291 PALP: Pyridoxal-phosphate dependent enzyme; InterPro: IPR001926 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. Pyridoxal-5'-phosphate-dependent enzymes (B6 enzymes) catalyze manifold reactions in the metabolism of amino acids. Most of these enzymes can be assigned to one of three different families of homologous proteins, the alpha, beta and gamma families. The alpha and gamma family might be distantly related with one another, but are clearly not homologous with the beta family. The beta family includes L- and D-serine dehydratase, threonine dehydratase, the beta subunit of tryptophan synthase, threonine synthase and cysteine synthase. These enzymes catalyze beta-replacement or beta-elimination reactions []. Comparison of sequences from eukaryotic, archebacterial, and eubacterial species indicates that the functional specialization of most B6 enzymes has occurred already in the universal ancestor cell. The cofactor pyridoxal-5-phosphate must have emerged very early in biological evolution; conceivably, organic cofactors and metal ions were the first biological catalysts []. The 3D structure of the beta-subunit of tryptophan synthase has been solved. The subunit has two domains that are approximately the same size and similar to each other in folding pattern. Each has a core containing a four-stranded parallel beta-sheet with three helices on its inner side and one on the outer side. The cofactor is bound at the interface between the domains [].; GO: 0003824 catalytic activity, 0030170 pyridoxal phosphate binding, 0008152 metabolic process; PDB: 1P5J_A 2D1F_B 3AEY_B 3AEX_B 3IAU_A 2Q3B_A 2Q3D_A 2Q3C_A 1TZJ_A 1RQX_D ....
Probab=24.89 E-value=3.7e+02 Score=25.45 Aligned_cols=56 Identities=14% Similarity=0.011 Sum_probs=44.3
Q ss_pred CCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEecc
Q 045072 64 GHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQ 120 (556)
Q Consensus 64 gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 120 (556)
++.| +....+-.-..+.++|...|..++.+-|..........++..++.++.+...
T Consensus 56 ~~~v-v~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 111 (306)
T PF00291_consen 56 GRTV-VGASSGNHGRALAYAAARLGLKCTIVVPEDVSPEKLKQMRALGAEVILVPGD 111 (306)
T ss_dssp TSEE-EEESSSHHHHHHHHHHHHHTCEEEEEEETTSHHHHHHHHHHTTCEEEEESST
T ss_pred ccee-eeeccCCceehhhhhhhhccccceeeeccccccccccceeeecceEEEcccc
Confidence 4556 6677777777788888888998888877777777788999999998887653
No 297
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=24.65 E-value=3.8e+02 Score=32.21 Aligned_cols=98 Identities=10% Similarity=-0.089 Sum_probs=64.7
Q ss_pred CCCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhh---hhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecC
Q 045072 186 NEWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSL---IDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRK 262 (556)
Q Consensus 186 ~~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~ 262 (556)
.++.+|++...+...+......+|++.+...+.... ...++++++++...++-...+ ....++++..|+..+.+++
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~-i~~~lA~l~~G~~~vpldp 327 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDL-VVAVMGVLKAGATFSVIDP 327 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHH-HHHHHHHHhhCcEEeccCC
Confidence 455676654322111111234688888865544443 345788999998888875443 4456788888988888875
Q ss_pred -CCHHHHHHHHHHhCCcEEechh
Q 045072 263 -FDAAVIYKMIRQHGVTHMCGAP 284 (556)
Q Consensus 263 -~~~~~~~~~i~~~~~t~~~~~p 284 (556)
..+.++...++..++..++...
T Consensus 328 ~~p~~~~~~~l~~~~~~~li~~~ 350 (1389)
T TIGR03443 328 AYPPARQTIYLSVAKPRALIVIE 350 (1389)
T ss_pred CCcHHHHHHHHHhcCCCEEEEec
Confidence 5677888889999998877643
No 298
>PF09153 DUF1938: Domain of unknown function (DUF1938); InterPro: IPR015236 This domain, which is predominantly found in the archaeal protein O6-alkylguanine-DNA alkyltransferase, adopts a secondary structure consisting of a three stranded antiparallel beta-sheet and three alpha helices. The exact function has not, as yet, been defined, though it has been postulated that this domain may confer thermostability to the protein []. ; GO: 0005737 cytoplasm; PDB: 1MGT_A.
Probab=24.53 E-value=1.7e+02 Score=21.52 Aligned_cols=31 Identities=19% Similarity=0.284 Sum_probs=22.9
Q ss_pred CEEEECC------ccccHHHHHH-HHHHHHHHHHHcCC
Q 045072 31 PSIIYNN------LIYTWSQTHR-RCLQLASSLSSIGI 61 (556)
Q Consensus 31 ~a~~~~~------~~~Ty~~l~~-~~~~la~~L~~~g~ 61 (556)
+|+++.+ -+++=.|+.+ +..+++..|.++|+
T Consensus 16 I~vi~e~kIqGItfslDg~efl~eri~~L~~~L~kRgv 53 (86)
T PF09153_consen 16 IAVIFEEKIQGITFSLDGEEFLRERISRLIEFLKKRGV 53 (86)
T ss_dssp EEEEESSSEEEEEEESSHHHHHH-HHHHHHHHHHHTT-
T ss_pred EEEEEcCceeeEEEEeccHHHHHHHHHHHHHHHHhcCc
Confidence 3555555 3466678888 99999999999876
No 299
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=24.38 E-value=5e+02 Score=23.45 Aligned_cols=81 Identities=10% Similarity=0.051 Sum_probs=47.8
Q ss_pred CEEEEEcCChHHHHHHHHHhhhccceE-eccCCCCCHHHHHHHHhccCCeEEEEec----------cchhhHHHHHhcCC
Q 045072 65 HVVSVVAPNIPAMYEAHFAIPFTGAIL-NNINTRLDARTISVLLQHSESKLVLVDY----------QSRNLVVEAISLFP 133 (556)
Q Consensus 65 d~V~i~~~~~~~~~~~~lA~~~~G~~~-v~l~~~~~~~~l~~~l~~~~~~~vi~~~----------~~~~~~~~~~~~~~ 133 (556)
|.|.++.......--++--+=..|+.+ +.++|..+.+.+.++|.+.....+.+-. +..+++.++.....
T Consensus 86 d~It~H~E~~~~~~r~i~~Ik~~G~kaGv~lnP~Tp~~~i~~~l~~vD~VllMsVnPGfgGQ~Fi~~~l~Ki~~lr~~~~ 165 (220)
T COG0036 86 DIITFHAEATEHIHRTIQLIKELGVKAGLVLNPATPLEALEPVLDDVDLVLLMSVNPGFGGQKFIPEVLEKIRELRAMID 165 (220)
T ss_pred CEEEEEeccCcCHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHhhCCEEEEEeECCCCcccccCHHHHHHHHHHHHHhc
Confidence 566666654433333322222233222 5678999999999999999988888732 44566666665554
Q ss_pred CCCCCCCeEEEcCC
Q 045072 134 SDIKCPPLVLIADH 147 (556)
Q Consensus 134 ~~~~~~~~~~~~~~ 147 (556)
. ++ ...+.+++.
T Consensus 166 ~-~~-~~~IeVDGG 177 (220)
T COG0036 166 E-RL-DILIEVDGG 177 (220)
T ss_pred c-cC-CeEEEEeCC
Confidence 3 22 334444444
No 300
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=24.36 E-value=4.3e+02 Score=25.00 Aligned_cols=90 Identities=11% Similarity=0.118 Sum_probs=53.2
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHH---HHHHHHhccCCeEEEE
Q 045072 41 TWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDAR---TISVLLQHSESKLVLV 117 (556)
Q Consensus 41 Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~---~l~~~l~~~~~~~vi~ 117 (556)
.+.++.++.+.+-..+++.--....+..+...+...++.-.|++-..+..-.--....++. ++...+++.+.++||+
T Consensus 155 N~~~~~~~L~~l~~~~~~~~~~~~~~~~v~~H~af~Yl~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~ 234 (286)
T cd01019 155 NLEAFNARLAELDATIKERLAPVKTKPFFVFHDAYGYFEKRYGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFA 234 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCeEEEecccHHHHHHHcCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 3555666666666655553112245566677778888877777654443221112233454 4556778999999999
Q ss_pred eccchhhHHHHHh
Q 045072 118 DYQSRNLVVEAIS 130 (556)
Q Consensus 118 ~~~~~~~~~~~~~ 130 (556)
.........+...
T Consensus 235 e~~~~~~~~~~ia 247 (286)
T cd01019 235 EPQFHPKIAETLA 247 (286)
T ss_pred cCCCChHHHHHHH
Confidence 8876655544433
No 301
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=24.35 E-value=2.5e+02 Score=23.82 Aligned_cols=25 Identities=24% Similarity=0.178 Sum_probs=20.5
Q ss_pred hHHHHHHHhcCCCccccEEEeecCC
Q 045072 456 SVEVESVLYTNPAVNEAAVVARPDE 480 (556)
Q Consensus 456 ~~~ie~~l~~~~~i~~~~v~~~~~~ 480 (556)
...|.+.+.+.|+|.++.++...+.
T Consensus 56 A~~Ia~~v~~v~~V~dA~vvVtg~~ 80 (158)
T TIGR02898 56 ADEIASEAAKVKGVKDATVVITGNY 80 (158)
T ss_pred HHHHHHHHhcCCCCceEEEEEECCE
Confidence 3567788888999999999988654
No 302
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=24.29 E-value=5.2e+02 Score=23.18 Aligned_cols=86 Identities=3% Similarity=-0.031 Sum_probs=57.5
Q ss_pred ECCccccHHHHHHHHHHHHHHHH-------HcC-C-CCCCEEEEEcCChHH----HHHHHHHhhhccceEeccCCCCCHH
Q 045072 35 YNNLIYTWSQTHRRCLQLASSLS-------SIG-I-TRGHVVSVVAPNIPA----MYEAHFAIPFTGAILNNINTRLDAR 101 (556)
Q Consensus 35 ~~~~~~Ty~~l~~~~~~la~~L~-------~~g-~-~~gd~V~i~~~~~~~----~~~~~lA~~~~G~~~v~l~~~~~~~ 101 (556)
|....+|-.|++-.++.+...|. ... - +...+|.+.++.+-. ..+....+-..|..++.+..+.+.+
T Consensus 50 w~~gei~vaqe~~as~~~~~~l~~l~~~l~~~~~~~~~~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e 129 (213)
T cd02069 50 FGAGKMFLPQVLKSARVMKAAVAYLEPYMEKEKGENSSKGKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIE 129 (213)
T ss_pred HccCCCcHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHH
Confidence 33466777777766555554432 222 1 123466666655422 2333444556899999999999999
Q ss_pred HHHHHHhccCCeEEEEecc
Q 045072 102 TISVLLQHSESKLVLVDYQ 120 (556)
Q Consensus 102 ~l~~~l~~~~~~~vi~~~~ 120 (556)
++...+.+.+|++|..+..
T Consensus 130 ~~v~~~~~~~~~~V~lS~~ 148 (213)
T cd02069 130 KILEAAKEHKADIIGLSGL 148 (213)
T ss_pred HHHHHHHHcCCCEEEEccc
Confidence 9999999999999888753
No 303
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=24.25 E-value=7.1e+02 Score=25.27 Aligned_cols=69 Identities=7% Similarity=0.048 Sum_probs=44.8
Q ss_pred cCCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHHHh
Q 045072 59 IGITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEAIS 130 (556)
Q Consensus 59 ~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~ 130 (556)
.|+..|++++.+......++-. +......+...+-..+.+.....|++.+|.++++.+.....+.+...
T Consensus 138 ~g~~~g~r~a~~~~~~~~ly~~---~~~~~~~~~~~~l~~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~ 206 (430)
T TIGR02304 138 DGLFAKHRIAFFLRADNNLYQS---VNNRWISLDFFDLLAPFQAHIKRLNQRKPSIIVAPPSVLRALALEVM 206 (430)
T ss_pred cccccCCcEEEEEccChhHHHH---HHhccceeeecCCCcCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHH
Confidence 3889999999994333232222 22223223333434567888899999999999998887776665433
No 304
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=24.09 E-value=3.4e+02 Score=28.43 Aligned_cols=83 Identities=6% Similarity=-0.049 Sum_probs=60.5
Q ss_pred EEEchHHHHHHHhhhhh---hcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecC-CCHHHHHHHHHHhCCcEEe
Q 045072 206 VVHCHRGIFVMTVDSLI---DWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRK-FDAAVIYKMIRQHGVTHMC 281 (556)
Q Consensus 206 v~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 281 (556)
..+|+..+......... ..++.+++++..+++-.... ....++++..|+..+.+.+ ..+.++...+++.+++.++
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~-~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi 125 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQY-PVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIV 125 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH-HHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEE
Confidence 36788888665544433 34788999998887764443 3445778888888887764 6788999999999999998
Q ss_pred chhHHHHH
Q 045072 282 GAPVVLNM 289 (556)
Q Consensus 282 ~~p~~~~~ 289 (556)
....+...
T Consensus 126 ~~~~~~~~ 133 (557)
T PRK07059 126 VLENFATT 133 (557)
T ss_pred EchhhHHH
Confidence 87665433
No 305
>PRK06110 hypothetical protein; Provisional
Probab=23.96 E-value=6.6e+02 Score=24.21 Aligned_cols=61 Identities=11% Similarity=-0.018 Sum_probs=43.0
Q ss_pred EEEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchhhHHHH
Q 045072 68 SVVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRNLVVEA 128 (556)
Q Consensus 68 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 128 (556)
.+....+-.-..+.++|...|..+..+-|..........++..++.++.++....+....+
T Consensus 73 vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~~~~~~~~a 133 (322)
T PRK06110 73 VISATRGNHGQSVAFAARRHGLAATIVVPHGNSVEKNAAMRALGAELIEHGEDFQAAREEA 133 (322)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECCCHHHHHHHH
Confidence 4445667777778888999998777665554444556889999999999876554443333
No 306
>PRK05939 hypothetical protein; Provisional
Probab=23.81 E-value=3.2e+02 Score=27.34 Aligned_cols=13 Identities=23% Similarity=0.307 Sum_probs=5.9
Q ss_pred HhccCCeEEEEec
Q 045072 107 LQHSESKLVLVDY 119 (556)
Q Consensus 107 l~~~~~~~vi~~~ 119 (556)
+...++++.+++.
T Consensus 106 l~~~G~~v~~v~~ 118 (397)
T PRK05939 106 LRGLGVEVTMVDA 118 (397)
T ss_pred HHhcCCEEEEECC
Confidence 3444455444443
No 307
>PRK13391 acyl-CoA synthetase; Provisional
Probab=23.31 E-value=5.6e+02 Score=26.42 Aligned_cols=95 Identities=11% Similarity=0.100 Sum_probs=64.5
Q ss_pred CCCcEEEEeccCCCCCCceEEEchHHHHHHHhhhhh---hcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecC-
Q 045072 187 EWDPMILNYTSGTTSSPKGVVHCHRGIFVMTVDSLI---DWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRK- 262 (556)
Q Consensus 187 ~~~~a~i~~TsGTTG~pK~v~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~- 262 (556)
++.++++...++ -.+|...+......... ..++.+++++..+.+-...+ +...++++..|+..+.+..
T Consensus 11 p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~-~~~~~a~~~~G~~~~~l~~~ 82 (511)
T PRK13391 11 PDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRY-LEVCWAAERSGLYYTCVNSH 82 (511)
T ss_pred CCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhccEEeccccc
Confidence 445665544332 24788877554444333 34788899998887765442 3445677788888887764
Q ss_pred CCHHHHHHHHHHhCCcEEechhHHHHH
Q 045072 263 FDAAVIYKMIRQHGVTHMCGAPVVLNM 289 (556)
Q Consensus 263 ~~~~~~~~~i~~~~~t~~~~~p~~~~~ 289 (556)
.+...+...+++.++..++..+.....
T Consensus 83 ~~~~~l~~~l~~~~~~~li~~~~~~~~ 109 (511)
T PRK13391 83 LTPAEAAYIVDDSGARALITSAAKLDV 109 (511)
T ss_pred cCHHHHHHHHhccCCcEEEEchhhHHH
Confidence 678899999999999999887765543
No 308
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=23.28 E-value=2.5e+02 Score=25.94 Aligned_cols=88 Identities=11% Similarity=0.135 Sum_probs=53.5
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHhhhccce-EeccCCCCCH---HHHHHHHhccCCeEEE
Q 045072 41 TWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAIPFTGAI-LNNINTRLDA---RTISVLLQHSESKLVL 116 (556)
Q Consensus 41 Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~-~v~l~~~~~~---~~l~~~l~~~~~~~vi 116 (556)
.+.++.++.+.+...+++.--.-..+..+.+.+..+++.-.|++-..|.. ..+ .-..++ .++...+++.++++||
T Consensus 126 N~~~~~~~L~~l~~~~~~~~~~~~~~~~v~~h~~~~Y~~~~~gl~~~~~~~~~~-~~~ps~~~l~~l~~~ik~~~v~~i~ 204 (256)
T PF01297_consen 126 NAEKYLKELDELDAEIKEKLAKLPGRPVVVYHDAFQYFAKRYGLKVIGVIEISP-GEEPSPKDLAELIKLIKENKVKCIF 204 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSGGEEEEEESTTHHHHHHTT-EEEEEESSSS-SSSS-HHHHHHHHHHHHHTT-SEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCeEEEEChHHHHHHHhcCCceeeeecccc-ccCCCHHHHHHHHHHhhhcCCcEEE
Confidence 34556666666666666532222225667788888899888888777755 111 223344 4455677999999999
Q ss_pred EeccchhhHHHHH
Q 045072 117 VDYQSRNLVVEAI 129 (556)
Q Consensus 117 ~~~~~~~~~~~~~ 129 (556)
++........+..
T Consensus 205 ~e~~~~~~~~~~l 217 (256)
T PF01297_consen 205 TEPQFSSKLAEAL 217 (256)
T ss_dssp EETTS-THHHHHH
T ss_pred ecCCCChHHHHHH
Confidence 9887666544444
No 309
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=23.10 E-value=77 Score=21.37 Aligned_cols=19 Identities=21% Similarity=0.324 Sum_probs=14.1
Q ss_pred cCceEEEecCCcEEEEccC
Q 045072 425 TGDVGVIHADGYLEIKDRS 443 (556)
Q Consensus 425 TGD~~~~~~dg~l~~~GR~ 443 (556)
-|.+.+.++||.+.+.|++
T Consensus 32 ~~~i~Y~~~dg~yli~G~l 50 (57)
T PF10411_consen 32 GGGILYVDEDGRYLIQGQL 50 (57)
T ss_dssp TTEEEEEETTSSEEEES-E
T ss_pred CCeEEEEcCCCCEEEEeEE
Confidence 4567888889988888864
No 310
>COG2885 OmpA Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]
Probab=22.96 E-value=2.3e+02 Score=24.74 Aligned_cols=58 Identities=17% Similarity=0.125 Sum_probs=39.6
Q ss_pred CCCCHHHHHHHHHHhcCCCCEEEECC----ccccHH--HHHHHHHHHHHHHHHcCCCCCCEEEEE
Q 045072 12 SPLTPLGFLERAATVYGDCPSIIYNN----LIYTWS--QTHRRCLQLASSLSSIGITRGHVVSVV 70 (556)
Q Consensus 12 ~~~t~~~~l~~~~~~~p~~~a~~~~~----~~~Ty~--~l~~~~~~la~~L~~~g~~~gd~V~i~ 70 (556)
......+.+.+..+.+|.....+... .+=.|. ==.++++.++.+|.+.|+.++ +|.+.
T Consensus 97 ~~~~~L~~~a~~L~~~p~~~i~V~GHTD~~Gs~~yN~~LS~rRA~aV~~~L~~~Gv~~~-~i~~~ 160 (190)
T COG2885 97 KAQATLDELAKYLKKNPITRILVEGHTDSTGSDEYNQALSERRAEAVADYLVSQGVVAD-RISTV 160 (190)
T ss_pred hHHHHHHHHHHHHHhCCCcEEEEEecCCCCCCHHHhHHHHHHHHHHHHHHHHHcCCCcc-cEEEE
Confidence 44555667777888898766666543 223333 234679999999999999888 66654
No 311
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=22.86 E-value=6.9e+02 Score=29.23 Aligned_cols=95 Identities=15% Similarity=0.118 Sum_probs=65.2
Q ss_pred cCCCCEEEECC---------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHH--HHHHHHHhhhccceEeccC
Q 045072 27 YGDCPSIIYNN---------LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPA--MYEAHFAIPFTGAILNNIN 95 (556)
Q Consensus 27 ~p~~~a~~~~~---------~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~ 95 (556)
.++.++++... -.+|.+.+...+...+. ..++.++|++...+|-... +...++..+..|+..+..+
T Consensus 791 ~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~ 867 (1140)
T PRK06814 791 DPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAA---RIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYP 867 (1140)
T ss_pred CCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHH---hhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEec
Confidence 45666665521 34888888766655543 3467899999888875433 3345667778898887765
Q ss_pred CCCCHHHHHHHHhccCCeEEEEeccchhh
Q 045072 96 TRLDARTISVLLQHSESKLVLVDYQSRNL 124 (556)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 124 (556)
.....+.+...+++.+++.+...+.....
T Consensus 868 ~~~~~~~~~~~i~~~~~t~~~~~p~~l~~ 896 (1140)
T PRK06814 868 SPLHYRIIPELIYDTNATILFGTDTFLNG 896 (1140)
T ss_pred CcccHHHHHHHHHhcCCEEEEecHHHHHH
Confidence 55556677788899999998887665543
No 312
>cd00754 MoaD Ubiquitin domain of MoaD-like proteins. MoaD family. Members of this family are involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor of a diverse group of redox enzymes. Moco biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. Moco contains a tricyclic pyranopterin, termed molybdopterin (MPT), that contains the cis-dithiolene group responsible for molybdenum ligation. This dithiolene group is generated by MPT synthase, the second major step in Moco biosynthesis. MPT synthase consists of a large (MoeE) and small (MoaD) subunit. The small subunit is inserted into the lare subunit to form the active site. The small subunit, which is structurally similar to ubiquitin, contains a C-terminal thiocarboxylated glycine residue that serves as a sulfur donor for the synthesis of the MPT dithiolene group.
Probab=22.76 E-value=2.2e+02 Score=20.42 Aligned_cols=45 Identities=18% Similarity=0.182 Sum_probs=30.1
Q ss_pred CCCHHHHHHHHHHhcCC-------CCEEEECCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcC
Q 045072 13 PLTPLGFLERAATVYGD-------CPSIIYNNLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAP 72 (556)
Q Consensus 13 ~~t~~~~l~~~~~~~p~-------~~a~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~ 72 (556)
..|+.+++++....+|+ ..++...++.++ .+.-++.||.|+++-|
T Consensus 25 ~~tv~~ll~~l~~~~~~~~~~~~~~~~v~vNg~~v~---------------~~~~l~~gD~v~i~pp 76 (80)
T cd00754 25 GATVGELLDALEARYPGLLEELLARVRIAVNGEYVR---------------LDTPLKDGDEVAIIPP 76 (80)
T ss_pred CCcHHHHHHHHHHHCchHHHhhhhcEEEEECCeEcC---------------CCcccCCCCEEEEeCC
Confidence 56888888888887765 333333444444 2345888999999876
No 313
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=22.47 E-value=4.4e+02 Score=21.65 Aligned_cols=42 Identities=12% Similarity=0.038 Sum_probs=36.1
Q ss_pred HHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEec
Q 045072 78 YEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDY 119 (556)
Q Consensus 78 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 119 (556)
.+..+.+-..|.-++.+-.+.+.+++.....+.+|++|..+.
T Consensus 21 ~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 21 KILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 344455567999999999999999999999999999999875
No 314
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=22.40 E-value=6.3e+02 Score=26.30 Aligned_cols=86 Identities=12% Similarity=0.036 Sum_probs=57.3
Q ss_pred cccHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCChHH-HHHHHHHhhhccceEeccC-CCCCHHHHHHHHhccCCeEE
Q 045072 39 IYTWSQTHRRCLQLASSLSSIGI-TRGHVVSVVAPNIPA-MYEAHFAIPFTGAILNNIN-TRLDARTISVLLQHSESKLV 115 (556)
Q Consensus 39 ~~Ty~~l~~~~~~la~~L~~~g~-~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~-~~~~~~~l~~~l~~~~~~~v 115 (556)
.+|++.+...+..+.. ..++ ..++++....|.... -+..+++.+..|+..+..+ ...+++.+...++..++..+
T Consensus 193 ~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~ 269 (542)
T PRK07786 193 VLTHANLTGQAMTCLR---TNGADINSDVGFVGVPLFHIAGIGSMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGI 269 (542)
T ss_pred hhhHHHHHHHHHHHHH---hcCCCCCCceEEEecchHHHHHHHHHHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEE
Confidence 4788888766554433 3355 455655555543321 2456778888998887653 24578899999999999999
Q ss_pred EEeccchhhHHH
Q 045072 116 LVDYQSRNLVVE 127 (556)
Q Consensus 116 i~~~~~~~~~~~ 127 (556)
...+.....+..
T Consensus 270 ~~~P~~l~~l~~ 281 (542)
T PRK07786 270 FLVPAQWQAVCA 281 (542)
T ss_pred EehHHHHHHHHh
Confidence 988876655543
No 315
>PRK06815 hypothetical protein; Provisional
Probab=22.35 E-value=6.9e+02 Score=24.01 Aligned_cols=55 Identities=9% Similarity=-0.014 Sum_probs=40.3
Q ss_pred EEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchh
Q 045072 69 VVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRN 123 (556)
Q Consensus 69 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 123 (556)
+....+-.-....++|..+|..+..+-|..........++..+++++.++.+...
T Consensus 72 v~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~V~~~~~~~~~ 126 (317)
T PRK06815 72 ITASSGNHGQGVALAAKLAGIPVTVYAPEQASAIKLDAIRALGAEVRLYGGDALN 126 (317)
T ss_pred EEECCChHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHHH
Confidence 3355666677777888889987776655555566677889999999999876443
No 316
>PLN02970 serine racemase
Probab=22.33 E-value=5.9e+02 Score=24.62 Aligned_cols=55 Identities=5% Similarity=-0.083 Sum_probs=41.2
Q ss_pred EEcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchh
Q 045072 69 VVAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRN 123 (556)
Q Consensus 69 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 123 (556)
+....+-.-+.+.++|...|..+..+=|..........++..++.++.++.....
T Consensus 79 v~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~~~~~GA~Vi~~~~~~~~ 133 (328)
T PLN02970 79 VTHSSGNHAAALALAAKLRGIPAYIVVPKNAPACKVDAVIRYGGIITWCEPTVES 133 (328)
T ss_pred EEECCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhcCCEEEEeCCCHHH
Confidence 3456677777778888899988777766655556667889999999999875443
No 317
>PRK07409 threonine synthase; Validated
Probab=22.30 E-value=3.2e+02 Score=26.80 Aligned_cols=56 Identities=9% Similarity=-0.133 Sum_probs=37.9
Q ss_pred EEEcCChHHHHHHHHHhhhccceEeccCCCC-CHHHHHHHHhccCCeEEEEeccchh
Q 045072 68 SVVAPNIPAMYEAHFAIPFTGAILNNINTRL-DARTISVLLQHSESKLVLVDYQSRN 123 (556)
Q Consensus 68 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~vi~~~~~~~ 123 (556)
.+....+-.-..+.++|...|..+..+-|.. ........++..++.+++++....+
T Consensus 81 iv~aSsGN~g~alA~~a~~~G~~~~ivvP~~~~~~~k~~~~~~~GA~Vi~~~~~~~~ 137 (353)
T PRK07409 81 VICASTGNTSASAAAYAARAGLKAFVLIPEGKIALGKLAQAVMYGAEIIQIDGNFDD 137 (353)
T ss_pred EEEECCcHHHHHHHHHHHHcCCCEEEEEcCCCCchhhHHHHHhcCCEEEEECCCHHH
Confidence 3444555556777888899998876555543 3444455668899999999875443
No 318
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=22.25 E-value=3.2e+02 Score=25.83 Aligned_cols=55 Identities=11% Similarity=0.158 Sum_probs=35.9
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCC----------CCCHHHHHHHHhc-cCCeEEEEe
Q 045072 61 ITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINT----------RLDARTISVLLQH-SESKLVLVD 118 (556)
Q Consensus 61 ~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~----------~~~~~~l~~~l~~-~~~~~vi~~ 118 (556)
+++||.|.+.-+..... +-++...|+.++.+++ ..+.+.+...+++ .++++++..
T Consensus 96 ~~~gd~Vlv~~~~h~s~---~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~ 161 (294)
T cd00615 96 CGPGDKILIDRNCHKSV---INGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVIT 161 (294)
T ss_pred CCCCCEEEEeCCchHHH---HHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEE
Confidence 57899888776654443 3345567887776654 2467888888865 467766654
No 319
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=22.15 E-value=4.3e+02 Score=26.27 Aligned_cols=49 Identities=14% Similarity=0.093 Sum_probs=21.6
Q ss_pred EcCChHHHHHHH-HHhhhccceEeccCCCCCH--HHHHHHHhccCCeEEEEe
Q 045072 70 VAPNIPAMYEAH-FAIPFTGAILNNINTRLDA--RTISVLLQHSESKLVLVD 118 (556)
Q Consensus 70 ~~~~~~~~~~~~-lA~~~~G~~~v~l~~~~~~--~~l~~~l~~~~~~~vi~~ 118 (556)
+.+++.+.+.+. .+++..|-.++..+|.+.. ..+..+....+..+.+++
T Consensus 71 ~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d 122 (382)
T TIGR02080 71 VTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVD 122 (382)
T ss_pred EEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEEC
Confidence 444444443333 3455556555544555542 222233333344555544
No 320
>TIGR02991 ectoine_eutB ectoine utilization protein EutB. Members of this protein family are EutB, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. Members of this family resemble threonine dehydratases.
Probab=22.01 E-value=5.2e+02 Score=24.88 Aligned_cols=54 Identities=9% Similarity=-0.011 Sum_probs=41.0
Q ss_pred EcCChHHHHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEEEEeccchh
Q 045072 70 VAPNIPAMYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLVLVDYQSRN 123 (556)
Q Consensus 70 ~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 123 (556)
....+-.-....++|...|..+..+-|..........++..++.+++++....+
T Consensus 72 ~aSsGN~g~alA~~a~~~G~~~~v~~p~~~~~~k~~~~~~~GA~V~~~~~~~~~ 125 (317)
T TIGR02991 72 AASTGNHGRALAYAAAEEGVRATICMSELVPQNKVDEIRRLGAEVRIVGRSQDD 125 (317)
T ss_pred EECCCHHHHHHHHHHHHhCCCEEEEcCCCCCHHHHHHHHHcCCEEEEeCCCHHH
Confidence 445566677777888999988877766666667778889999999999875433
No 321
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=22.00 E-value=2.4e+02 Score=24.46 Aligned_cols=47 Identities=2% Similarity=0.058 Sum_probs=32.9
Q ss_pred CccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHHHHHHHHHh
Q 045072 37 NLIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPAMYEAHFAI 84 (556)
Q Consensus 37 ~~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~ 84 (556)
+.-+||.|+.+.+.++|..+.+. +.....+.+...++-..++..+|-
T Consensus 14 ~~~~s~~~i~~~i~~la~~i~~~-~~~~~~viV~i~~gg~~~A~~La~ 60 (181)
T PRK09162 14 DCLVSAAEVEAAIDRMADEITAD-LADENPLVLCVMGGGLVFTGQLLP 60 (181)
T ss_pred cEeecHHHHHHHHHHHHHHHHHH-cCCCCeEEEEECCCcHHHHHHHHH
Confidence 45689999999999999999985 222223555556666666666653
No 322
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=21.93 E-value=4.1e+02 Score=26.47 Aligned_cols=12 Identities=17% Similarity=0.088 Sum_probs=5.7
Q ss_pred cHHHHHHHHHHH
Q 045072 41 TWSQTHRRCLQL 52 (556)
Q Consensus 41 Ty~~l~~~~~~l 52 (556)
|+.+|.++..++
T Consensus 54 ~~~~lE~~lA~l 65 (385)
T PRK08574 54 TLRPLEEALAKL 65 (385)
T ss_pred cHHHHHHHHHHH
Confidence 455555544333
No 323
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=21.92 E-value=95 Score=17.47 Aligned_cols=20 Identities=40% Similarity=0.506 Sum_probs=16.1
Q ss_pred CCCCCCCCccHHHHHHHHHH
Q 045072 528 LPKTSTGKIKKFELREMAKA 547 (556)
Q Consensus 528 lP~t~~GKv~r~~l~~~~~~ 547 (556)
+-++.+|+|++..+.+++.+
T Consensus 9 ~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 9 FDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HSTTSSSEEEHHHHHHHHHH
T ss_pred HCCCCCCcCCHHHHHHHHHh
Confidence 44677899999999888765
No 324
>PRK13382 acyl-CoA synthetase; Provisional
Probab=21.79 E-value=4.7e+02 Score=27.28 Aligned_cols=81 Identities=11% Similarity=0.014 Sum_probs=58.3
Q ss_pred EEchHHHHHHHhhh---hhhcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecC-CCHHHHHHHHHHhCCcEEec
Q 045072 207 VHCHRGIFVMTVDS---LIDWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRK-FDAAVIYKMIRQHGVTHMCG 282 (556)
Q Consensus 207 ~~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~~~~ 282 (556)
.+|...+...+... ....++.+++++...++-... .+...++++..|+..+.+.+ ....++...+++.+++.++.
T Consensus 68 ~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 146 (537)
T PRK13382 68 TLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRG-FVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVIY 146 (537)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHH-HHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEEE
Confidence 47777775443333 334578899999888876544 24456777888888887764 67789999999999999987
Q ss_pred hhHHHH
Q 045072 283 APVVLN 288 (556)
Q Consensus 283 ~p~~~~ 288 (556)
......
T Consensus 147 ~~~~~~ 152 (537)
T PRK13382 147 DEEFSA 152 (537)
T ss_pred chhhHH
Confidence 665443
No 325
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=21.66 E-value=2.1e+02 Score=31.06 Aligned_cols=47 Identities=6% Similarity=0.047 Sum_probs=35.9
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCC---------CH-----HHHHHHHhcc
Q 045072 61 ITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRL---------DA-----RTISVLLQHS 110 (556)
Q Consensus 61 ~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~---------~~-----~~l~~~l~~~ 110 (556)
+++||.|. +-.|+.-++.. |+..+|+.++.|.|.. +. +.++..+++.
T Consensus 232 ~~~Gd~VL-vdRN~HKSv~~--aLilsga~PVYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~ 292 (713)
T PRK15399 232 APAGSTLL-IDRNCHKSLAH--LLMMSDVVPIWLKPTRNALGILGGIPRREFTRDSIEEKVAAT 292 (713)
T ss_pred cCCCCEEE-eecccHHHHHH--HHHHcCCeeEEecccccccCCcCCCChhhccHHHHHHHHHhC
Confidence 68899665 67777777666 9999999999998764 23 7777777654
No 326
>PRK14057 epimerase; Provisional
Probab=21.34 E-value=5.3e+02 Score=23.95 Aligned_cols=55 Identities=11% Similarity=-0.031 Sum_probs=39.3
Q ss_pred CCEEEEEcCChHHHHHHHHHhhhccc----------eEeccCCCCCHHHHHHHHhccCCeEEEEe
Q 045072 64 GHVVSVVAPNIPAMYEAHFAIPFTGA----------ILNNINTRLDARTISVLLQHSESKLVLVD 118 (556)
Q Consensus 64 gd~V~i~~~~~~~~~~~~lA~~~~G~----------~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 118 (556)
.|.|.++.....+..-.+-.+-..|+ .-+.++|..+.+.+..+|.......+.+-
T Consensus 99 ad~It~H~Ea~~~~~~~l~~Ir~~G~k~~~~~~~~kaGlAlnP~Tp~e~i~~~l~~vD~VLvMtV 163 (254)
T PRK14057 99 AHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAV 163 (254)
T ss_pred CCEEEEeeccccCHHHHHHHHHHcCCCcccccccceeEEEECCCCCHHHHHHHHHhCCEEEEEEE
Confidence 57888888866555444444555554 45778888999999999988777777663
No 327
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=21.15 E-value=42 Score=15.96 Aligned_cols=9 Identities=78% Similarity=1.280 Sum_probs=6.4
Q ss_pred ccccccccc
Q 045072 330 GYGLTETAG 338 (556)
Q Consensus 330 ~yG~tE~~~ 338 (556)
+||+|++.+
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 488888754
No 328
>PRK06145 acyl-CoA synthetase; Validated
Probab=20.98 E-value=7.4e+02 Score=25.31 Aligned_cols=85 Identities=13% Similarity=0.223 Sum_probs=58.8
Q ss_pred ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCChHH--HHHHHHHhhhccceEeccCCCCCHHHHHHHHhccCCeEE
Q 045072 38 LIYTWSQTHRRCLQLASSLSSIGITRGHVVSVVAPNIPA--MYEAHFAIPFTGAILNNINTRLDARTISVLLQHSESKLV 115 (556)
Q Consensus 38 ~~~Ty~~l~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 115 (556)
-.+|+..+...+. ......++..+|++....|-... +....++++..|+..+.. +..+...+...+++.++..+
T Consensus 167 v~~s~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~ 242 (497)
T PRK06145 167 VMHSYGNLHWKSI---DHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIH-REFDPEAVLAAIERHRLTCA 242 (497)
T ss_pred EEEecHHHHHHHH---HHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEEC-CcCCHHHHHHHHHHhCCeEE
Confidence 4488888765433 33445688999998888775432 223346667788776654 55788999999999999998
Q ss_pred EEeccchhhHH
Q 045072 116 LVDYQSRNLVV 126 (556)
Q Consensus 116 i~~~~~~~~~~ 126 (556)
...+.....+.
T Consensus 243 ~~~P~~~~~ll 253 (497)
T PRK06145 243 WMAPVMLSRVL 253 (497)
T ss_pred EehHHHHHHHH
Confidence 88776554443
No 329
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=20.70 E-value=5.9e+02 Score=22.47 Aligned_cols=85 Identities=5% Similarity=-0.053 Sum_probs=56.9
Q ss_pred ECCccccHHHHHHHHHHHHHHHHH-------cCCCCCCEEEEEcCCh-HH---HHHHHHHhhhccceEeccCCCCCHHHH
Q 045072 35 YNNLIYTWSQTHRRCLQLASSLSS-------IGITRGHVVSVVAPNI-PA---MYEAHFAIPFTGAILNNINTRLDARTI 103 (556)
Q Consensus 35 ~~~~~~Ty~~l~~~~~~la~~L~~-------~g~~~gd~V~i~~~~~-~~---~~~~~lA~~~~G~~~v~l~~~~~~~~l 103 (556)
|....++..|.+-.++.+-..|.. .+...+.+|.+.+..+ .+ .......+-..|.-++.+..+.+.+++
T Consensus 46 w~~~~i~va~e~~as~~~~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l 125 (201)
T cd02070 46 YEEGEIFVPELLMAADAMKAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEF 125 (201)
T ss_pred HccCCeeHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 344678888877776655554443 1222244666665443 22 223333445689999999999999999
Q ss_pred HHHHhccCCeEEEEec
Q 045072 104 SVLLQHSESKLVLVDY 119 (556)
Q Consensus 104 ~~~l~~~~~~~vi~~~ 119 (556)
...+.+.+|++|..+.
T Consensus 126 ~~~~~~~~~d~v~lS~ 141 (201)
T cd02070 126 VEAVKEHKPDILGLSA 141 (201)
T ss_pred HHHHHHcCCCEEEEec
Confidence 9999999999988765
No 330
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=20.68 E-value=5.7e+02 Score=24.15 Aligned_cols=86 Identities=8% Similarity=0.010 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHHHHc--CCCCCCEEEEEcCChHHHHHHHHHhhhccceEeccCCCCCH---HHHHHHHhccCCeEEE
Q 045072 42 WSQTHRRCLQLASSLSSI--GITRGHVVSVVAPNIPAMYEAHFAIPFTGAILNNINTRLDA---RTISVLLQHSESKLVL 116 (556)
Q Consensus 42 y~~l~~~~~~la~~L~~~--g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~---~~l~~~l~~~~~~~vi 116 (556)
+..+.++.+.+-..+++. .+....+..+...+...++.-.|++-..+..-.-=....++ .++...+++.++++||
T Consensus 152 ~~~~~~~L~~l~~~~~~~l~~~~~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if 231 (287)
T cd01137 152 AAAYKAKLKALDEWAKAKFATIPAEKRKLVTSEGAFSYFAKAYGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVF 231 (287)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccCEEEEecccHHHHHHHcCCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEE
Confidence 445555555555555542 33334566777777888888777766665322111222345 4555677889999999
Q ss_pred EeccchhhHHH
Q 045072 117 VDYQSRNLVVE 127 (556)
Q Consensus 117 ~~~~~~~~~~~ 127 (556)
++........+
T Consensus 232 ~e~~~~~~~~~ 242 (287)
T cd01137 232 VESTVNDRLMK 242 (287)
T ss_pred EeCCCChHHHH
Confidence 98876554433
No 331
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=20.59 E-value=5.2e+02 Score=26.45 Aligned_cols=68 Identities=18% Similarity=0.251 Sum_probs=42.4
Q ss_pred cccHHHHHHHHHHH--------------HHH-HHHcCCCCCCEEEEEcCChHHHHHHHHH-hhhccceEecc--------
Q 045072 39 IYTWSQTHRRCLQL--------------ASS-LSSIGITRGHVVSVVAPNIPAMYEAHFA-IPFTGAILNNI-------- 94 (556)
Q Consensus 39 ~~Ty~~l~~~~~~l--------------a~~-L~~~g~~~gd~V~i~~~~~~~~~~~~lA-~~~~G~~~v~l-------- 94 (556)
.-||.+|.+.+..+ |.. +...++++||.| .+..++...-| +...|++++-+
T Consensus 77 d~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V-----p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~ 151 (460)
T PRK13237 77 SRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV-----PGNMYFTTTRYHQELNGGIFVDIIIDEAHDA 151 (460)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE-----CCccchHhhHHHHHhCCcEEEeeeccccccc
Confidence 34777777776543 222 233588999964 23334444444 67788877633
Q ss_pred ------CCCCCHHHHHHHHhccC
Q 045072 95 ------NTRLDARTISVLLQHSE 111 (556)
Q Consensus 95 ------~~~~~~~~l~~~l~~~~ 111 (556)
.-+++.+.++..++..+
T Consensus 152 ~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 152 QSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred ccCCCCCCCcCHHHHHHHhcccc
Confidence 44578889988887643
No 332
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.49 E-value=6.4e+02 Score=24.00 Aligned_cols=70 Identities=7% Similarity=-0.045 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCChHHHHHH---HHHhhhccceE--eccCCCCCHHHHHHHHhccCC
Q 045072 43 SQTHRRCLQLASSLSSI-GITRGHVVSVVAPNIPAMYEA---HFAIPFTGAIL--NNINTRLDARTISVLLQHSES 112 (556)
Q Consensus 43 ~~l~~~~~~la~~L~~~-g~~~gd~V~i~~~~~~~~~~~---~lA~~~~G~~~--v~l~~~~~~~~l~~~l~~~~~ 112 (556)
.++.++..+-...|++. |.+|+=.+.++.++.....+. .=+|-.+|..+ .-++.+.+.+++...+++.+-
T Consensus 11 ~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~ 86 (293)
T PRK14185 11 AQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKVRELNQ 86 (293)
T ss_pred HHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 44555555555556665 777754444444443333322 34899999888 556777788888877776644
No 333
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=20.31 E-value=1.1e+03 Score=25.21 Aligned_cols=83 Identities=11% Similarity=-0.104 Sum_probs=57.4
Q ss_pred EEEchHHHHHHHhhhhhhc--CCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEe-cC-C--CHHHHHHHHHHhCCcE
Q 045072 206 VVHCHRGIFVMTVDSLIDW--SIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCL-RK-F--DAAVIYKMIRQHGVTH 279 (556)
Q Consensus 206 v~~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~-~~-~--~~~~~~~~i~~~~~t~ 279 (556)
..+|...+...+......+ .+.++|++...++-... .+...++++..|+..+.+ ++ . .++++...++..++..
T Consensus 67 ~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~e-~~~~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~ 145 (612)
T PRK12476 67 VELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGID-YVAGFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTV 145 (612)
T ss_pred eEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCChh-HHHHHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCE
Confidence 4678888765544433322 26889999888887643 234466777888887766 33 2 2678999999999999
Q ss_pred EechhHHHHH
Q 045072 280 MCGAPVVLNM 289 (556)
Q Consensus 280 ~~~~p~~~~~ 289 (556)
+++.+.....
T Consensus 146 li~~~~~~~~ 155 (612)
T PRK12476 146 VLTTTAAAEA 155 (612)
T ss_pred EEEcHHHHHH
Confidence 9988766544
No 334
>PRK12582 acyl-CoA synthetase; Provisional
Probab=20.09 E-value=3.5e+02 Score=28.99 Aligned_cols=78 Identities=4% Similarity=-0.169 Sum_probs=55.3
Q ss_pred EEEchHHHHHHHhhhhh---hcCCCCCCEEEEecChhhhhhchhhhHhHhcCcEeEEecC-CC-----HHHHHHHHHHhC
Q 045072 206 VVHCHRGIFVMTVDSLI---DWSIPKQPVYLWTLPMFHANGWSYPWGMAAVGGTNVCLRK-FD-----AAVIYKMIRQHG 276 (556)
Q Consensus 206 v~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~-----~~~~~~~i~~~~ 276 (556)
-.+|.+.+......... ..+++++|++...++-... .....++++..|+..+.+.+ .+ ..++...+++.+
T Consensus 79 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~ 157 (624)
T PRK12582 79 RKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIE-HALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVK 157 (624)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHH-HHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcC
Confidence 46888888665544433 4578899999888885432 23446677888888877764 22 378999999999
Q ss_pred CcEEechh
Q 045072 277 VTHMCGAP 284 (556)
Q Consensus 277 ~t~~~~~p 284 (556)
+..++...
T Consensus 158 ~~~vi~~~ 165 (624)
T PRK12582 158 PRVVFAQS 165 (624)
T ss_pred CcEEEecC
Confidence 98887653
Done!