Query 045073
Match_columns 402
No_of_seqs 442 out of 1440
Neff 10.9
Searched_HMMs 46136
Date Fri Mar 29 09:34:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045073.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045073hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00887 2A0109 phosphate:H+ 100.0 1.2E-34 2.5E-39 275.9 28.7 357 2-376 133-501 (502)
2 KOG0569 Permease of the major 100.0 6.9E-34 1.5E-38 258.6 23.7 326 4-381 136-472 (485)
3 KOG0252 Inorganic phosphate tr 100.0 1.6E-34 3.5E-39 252.5 16.3 348 1-379 161-513 (538)
4 TIGR01299 synapt_SV2 synaptic 100.0 1.3E-29 2.8E-34 245.2 25.0 333 3-371 274-741 (742)
5 PRK10642 proline/glycine betai 100.0 3E-27 6.5E-32 224.3 26.5 303 1-372 135-438 (490)
6 KOG0253 Synaptic vesicle trans 100.0 1.7E-26 3.7E-31 196.7 26.5 315 2-371 183-527 (528)
7 PRK10077 xylE D-xylose transpo 100.0 2.8E-27 6.1E-32 224.8 22.4 325 2-377 138-471 (479)
8 KOG0254 Predicted transporter 100.0 1.8E-26 3.9E-31 219.8 23.4 325 4-378 162-498 (513)
9 PF00083 Sugar_tr: Sugar (and 99.9 1.6E-31 3.5E-36 251.9 -13.9 324 2-376 120-449 (451)
10 TIGR00898 2A0119 cation transp 99.9 7.6E-26 1.6E-30 216.3 22.4 298 3-373 199-504 (505)
11 TIGR00879 SP MFS transporter, 99.9 3.9E-25 8.6E-30 210.0 23.2 320 3-372 146-479 (481)
12 PRK09952 shikimate transporter 99.9 2.3E-24 5E-29 201.7 24.0 293 1-367 142-436 (438)
13 PRK10406 alpha-ketoglutarate t 99.9 1.1E-22 2.4E-27 190.3 24.3 287 1-370 141-429 (432)
14 COG2271 UhpC Sugar phosphate p 99.9 5E-24 1.1E-28 186.2 13.8 291 2-363 135-433 (448)
15 TIGR00903 2A0129 major facilit 99.9 2.8E-22 6E-27 182.5 22.8 262 5-364 99-365 (368)
16 PRK11551 putative 3-hydroxyphe 99.9 2.9E-22 6.2E-27 186.4 22.8 273 3-363 122-395 (406)
17 PRK11663 regulatory protein Uh 99.9 3.5E-22 7.6E-27 186.9 22.2 289 2-362 129-422 (434)
18 PRK12307 putative sialic acid 99.9 1.1E-21 2.3E-26 183.7 23.2 264 3-344 125-388 (426)
19 TIGR02332 HpaX 4-hydroxyphenyl 99.9 1.3E-21 2.9E-26 181.6 23.2 291 3-353 115-410 (412)
20 PRK15075 citrate-proton sympor 99.9 2.3E-21 4.9E-26 181.6 24.2 259 2-338 135-395 (434)
21 PRK10489 enterobactin exporter 99.9 2.5E-21 5.4E-26 180.6 21.3 282 4-377 130-413 (417)
22 TIGR00891 2A0112 putative sial 99.9 6.3E-21 1.4E-25 177.3 23.6 281 3-348 119-400 (405)
23 PRK11273 glpT sn-glycerol-3-ph 99.9 4.9E-21 1.1E-25 180.2 21.9 289 3-363 139-434 (452)
24 PRK09556 uhpT sugar phosphate 99.9 1.2E-21 2.7E-26 185.0 16.1 294 2-363 140-448 (467)
25 TIGR00895 2A0115 benzoate tran 99.9 9.7E-21 2.1E-25 175.5 21.8 274 2-334 123-397 (398)
26 PRK03893 putative sialic acid 99.9 8.3E-21 1.8E-25 181.3 21.8 292 3-353 127-442 (496)
27 TIGR00883 2A0106 metabolite-pr 99.9 2.2E-20 4.8E-25 172.8 23.9 276 2-354 114-391 (394)
28 TIGR00893 2A0114 d-galactonate 99.9 2.1E-20 4.5E-25 173.1 21.9 291 3-360 101-395 (399)
29 TIGR00894 2A0114euk Na(+)-depe 99.9 6.1E-20 1.3E-24 173.7 25.1 291 2-365 149-451 (465)
30 PRK03545 putative arabinose tr 99.9 5.4E-20 1.2E-24 170.1 23.6 262 3-363 116-379 (390)
31 COG2814 AraJ Arabinose efflux 99.9 1.1E-19 2.4E-24 161.1 21.8 264 3-363 120-385 (394)
32 KOG0255 Synaptic vesicle trans 99.9 8.2E-20 1.8E-24 175.1 22.2 305 3-378 190-507 (521)
33 PRK11010 ampG muropeptide tran 99.9 2E-19 4.4E-24 170.2 24.1 276 4-366 127-405 (491)
34 TIGR00712 glpT glycerol-3-phos 99.8 9.2E-20 2E-24 170.9 20.6 297 3-367 137-437 (438)
35 TIGR00890 2A0111 Oxalate/Forma 99.8 3.2E-19 6.9E-24 164.1 22.7 265 4-358 111-376 (377)
36 PLN00028 nitrate transmembrane 99.8 2.6E-19 5.6E-24 169.2 21.2 280 5-363 144-432 (476)
37 KOG2532 Permease of the major 99.8 4E-19 8.7E-24 164.3 21.5 289 2-363 146-446 (466)
38 PRK05122 major facilitator sup 99.8 5.7E-19 1.2E-23 163.9 22.8 264 3-369 131-394 (399)
39 TIGR00892 2A0113 monocarboxyla 99.8 3.7E-20 7.9E-25 174.1 14.9 285 4-360 128-417 (455)
40 PRK15011 sugar efflux transpor 99.8 6.4E-19 1.4E-23 162.9 21.7 264 4-365 125-392 (393)
41 PRK09705 cynX putative cyanate 99.8 1.1E-18 2.4E-23 161.2 23.1 271 3-371 116-389 (393)
42 PRK03699 putative transporter; 99.8 4.7E-19 1E-23 163.9 20.5 269 3-367 114-383 (394)
43 TIGR00899 2A0120 sugar efflux 99.8 8E-19 1.7E-23 161.5 21.9 265 3-364 106-374 (375)
44 COG2223 NarK Nitrate/nitrite t 99.8 8.1E-19 1.7E-23 154.0 19.0 274 2-363 122-400 (417)
45 cd06174 MFS The Major Facilita 99.8 3E-18 6.5E-23 156.0 23.7 245 2-363 105-351 (352)
46 TIGR00900 2A0121 H+ Antiporter 99.8 4.6E-18 9.9E-23 155.7 21.9 250 3-338 111-364 (365)
47 PRK09874 drug efflux system pr 99.8 4E-18 8.6E-23 158.7 21.2 272 3-363 125-397 (408)
48 PRK12382 putative transporter; 99.8 5.8E-18 1.3E-22 156.7 21.9 257 3-362 131-387 (392)
49 KOG2533 Permease of the major 99.8 3.4E-19 7.3E-24 165.1 12.6 194 2-240 152-353 (495)
50 TIGR00897 2A0118 polyol permea 99.8 1.5E-17 3.3E-22 154.2 23.6 272 5-363 126-400 (402)
51 PRK10504 putative transporter; 99.8 1.3E-17 2.9E-22 158.1 22.7 276 3-338 117-416 (471)
52 TIGR00881 2A0104 phosphoglycer 99.8 2.4E-18 5.3E-23 158.3 16.7 274 2-345 101-378 (379)
53 PRK10091 MFS transport protein 99.8 2.2E-17 4.8E-22 152.1 22.5 260 4-361 111-373 (382)
54 PRK10213 nepI ribonucleoside t 99.8 5.4E-17 1.2E-21 149.9 24.7 255 3-356 127-383 (394)
55 PRK11902 ampG muropeptide tran 99.8 6E-17 1.3E-21 150.3 24.5 272 3-364 113-390 (402)
56 TIGR00901 2A0125 AmpG-related 99.8 3.6E-17 7.7E-22 149.4 19.7 252 4-321 103-355 (356)
57 PRK14995 methyl viologen resis 99.8 8.7E-17 1.9E-21 153.0 21.5 271 6-337 116-413 (495)
58 TIGR00710 efflux_Bcr_CflA drug 99.8 2.9E-16 6.3E-21 145.0 24.5 247 3-336 112-360 (385)
59 TIGR00711 efflux_EmrB drug res 99.8 3.6E-17 7.8E-22 155.9 18.7 276 3-337 109-410 (485)
60 TIGR00902 2A0127 phenyl propri 99.8 1.1E-16 2.4E-21 147.4 20.7 262 3-360 113-375 (382)
61 PRK15034 nitrate/nitrite trans 99.8 2.7E-16 5.8E-21 144.7 22.4 282 2-363 145-453 (462)
62 PRK15402 multidrug efflux syst 99.8 6.2E-16 1.3E-20 143.8 25.1 250 3-338 120-371 (406)
63 PRK11102 bicyclomycin/multidru 99.7 5.8E-16 1.3E-20 142.6 23.8 243 4-332 99-344 (377)
64 TIGR02718 sider_RhtX_FptX side 99.7 4.5E-16 9.8E-21 143.9 22.9 266 7-360 120-387 (390)
65 PRK11195 lysophospholipid tran 99.7 5.4E-16 1.2E-20 143.2 23.1 269 2-361 106-377 (393)
66 TIGR00792 gph sugar (Glycoside 99.7 2.3E-16 4.9E-21 148.3 20.5 252 6-338 121-381 (437)
67 PRK11043 putative transporter; 99.7 1.3E-15 2.8E-20 141.5 24.8 242 6-337 116-357 (401)
68 PRK10473 multidrug efflux syst 99.7 8.4E-16 1.8E-20 142.3 23.4 177 3-249 110-288 (392)
69 PF07690 MFS_1: Major Facilita 99.7 3.4E-17 7.3E-22 149.3 13.7 246 3-328 104-352 (352)
70 PRK09528 lacY galactoside perm 99.7 1.3E-16 2.9E-21 148.9 16.6 135 205-363 267-402 (420)
71 TIGR01272 gluP glucose/galacto 99.7 2.7E-15 5.8E-20 133.4 23.2 270 3-352 29-303 (310)
72 PRK03633 putative MFS family t 99.7 1.8E-15 4E-20 139.3 23.0 153 171-362 218-370 (381)
73 PF11700 ATG22: Vacuole efflux 99.7 1.1E-14 2.5E-19 135.7 26.7 297 6-370 148-474 (477)
74 PRK11128 putative 3-phenylprop 99.7 1.8E-15 4E-20 139.4 21.3 261 3-359 113-374 (382)
75 TIGR00889 2A0110 nucleoside tr 99.7 1.1E-15 2.3E-20 142.2 19.5 175 171-368 226-407 (418)
76 PRK06814 acylglycerophosphoeth 99.7 1.6E-15 3.4E-20 158.9 22.6 283 2-352 126-410 (1140)
77 PRK10054 putative transporter; 99.7 1.4E-15 3E-20 140.5 19.8 263 3-361 115-381 (395)
78 PRK11646 multidrug resistance 99.7 1.4E-15 3.1E-20 140.8 19.7 262 3-359 118-383 (400)
79 PRK08633 2-acyl-glycerophospho 99.7 1.6E-15 3.4E-20 159.3 22.4 277 3-355 122-401 (1146)
80 PF05977 MFS_3: Transmembrane 99.7 4.9E-15 1.1E-19 139.6 21.5 269 3-361 122-391 (524)
81 KOG2504 Monocarboxylate transp 99.7 5.9E-16 1.3E-20 145.1 12.6 295 5-364 156-476 (509)
82 TIGR00886 2A0108 nitrite extru 99.7 5.5E-15 1.2E-19 135.5 17.9 253 4-323 110-365 (366)
83 TIGR00896 CynX cyanate transpo 99.6 3.9E-14 8.5E-19 129.3 22.5 242 4-339 107-350 (355)
84 PRK15403 multidrug efflux syst 99.6 7.1E-14 1.5E-18 129.9 22.8 261 5-355 125-388 (413)
85 TIGR00882 2A0105 oligosacchari 99.6 2.3E-14 5E-19 132.8 18.7 132 205-360 259-391 (396)
86 PRK11652 emrD multidrug resist 99.6 1.1E-13 2.4E-18 128.3 22.7 242 5-337 117-360 (394)
87 COG2807 CynX Cyanate permease 99.6 9E-14 2E-18 119.9 18.6 262 5-362 120-383 (395)
88 TIGR02332 HpaX 4-hydroxyphenyl 99.6 2.9E-14 6.2E-19 132.6 17.0 183 152-368 7-194 (412)
89 TIGR00885 fucP L-fucose:H+ sym 99.6 2.6E-13 5.7E-18 125.8 23.2 280 3-353 113-401 (410)
90 KOG1330 Sugar transporter/spin 99.6 1.4E-15 2.9E-20 135.0 6.9 261 2-339 139-414 (493)
91 COG2271 UhpC Sugar phosphate p 99.6 1.6E-14 3.5E-19 127.0 13.1 183 145-363 21-205 (448)
92 PRK10133 L-fucose transporter; 99.6 3.1E-13 6.8E-18 126.4 22.7 283 3-357 136-426 (438)
93 TIGR01299 synapt_SV2 synaptic 99.6 3.7E-14 8E-19 138.3 16.2 181 153-367 167-358 (742)
94 TIGR00895 2A0115 benzoate tran 99.6 2.9E-14 6.4E-19 132.1 14.5 179 154-368 18-197 (398)
95 PRK10429 melibiose:sodium symp 99.6 3E-13 6.5E-18 128.1 20.9 258 6-338 128-394 (473)
96 PRK11663 regulatory protein Uh 99.6 1.2E-13 2.6E-18 129.4 17.1 176 155-366 25-201 (434)
97 TIGR00891 2A0112 putative sial 99.6 9E-14 2E-18 129.2 16.0 183 151-367 10-192 (405)
98 COG2211 MelB Na+/melibiose sym 99.6 1.4E-12 3.1E-17 118.6 23.0 254 7-339 135-398 (467)
99 TIGR01301 GPH_sucrose GPH fami 99.6 1.6E-12 3.5E-17 120.7 23.8 330 5-368 135-476 (477)
100 PRK10213 nepI ribonucleoside t 99.5 1.5E-13 3.3E-18 126.9 16.0 180 151-366 18-198 (394)
101 PRK03545 putative arabinose tr 99.5 1.4E-13 3E-18 127.4 15.1 176 155-366 11-187 (390)
102 PF13347 MFS_2: MFS/sugar tran 99.5 1.3E-12 2.7E-17 122.4 21.1 250 6-338 125-385 (428)
103 TIGR00710 efflux_Bcr_CflA drug 99.5 1.6E-13 3.4E-18 126.8 14.5 177 156-368 8-185 (385)
104 TIGR00893 2A0114 d-galactonate 99.5 1.2E-13 2.5E-18 127.9 13.5 164 169-368 10-174 (399)
105 COG2814 AraJ Arabinose efflux 99.5 3.1E-13 6.7E-18 120.4 15.3 176 153-364 13-189 (394)
106 PRK11551 putative 3-hydroxyphe 99.5 2.2E-13 4.7E-18 126.8 15.2 182 150-367 12-194 (406)
107 PRK09669 putative symporter Ya 99.5 1.5E-12 3.2E-17 122.6 20.9 250 6-338 131-389 (444)
108 PRK14995 methyl viologen resis 99.5 5E-13 1.1E-17 127.3 16.2 179 153-367 6-186 (495)
109 PF06609 TRI12: Fungal trichot 99.5 2E-12 4.4E-17 121.9 19.9 187 153-368 310-558 (599)
110 PLN00028 nitrate transmembrane 99.5 9.1E-13 2E-17 124.8 17.7 177 153-364 36-219 (476)
111 PRK12307 putative sialic acid 99.5 4.2E-13 9.1E-18 125.7 15.2 164 154-353 19-182 (426)
112 PRK15462 dipeptide/tripeptide 99.5 9.2E-13 2E-17 122.8 16.8 174 153-361 9-186 (493)
113 TIGR00887 2A0109 phosphate:H+ 99.5 8.9E-13 1.9E-17 125.9 17.2 148 205-368 61-229 (502)
114 TIGR00881 2A0104 phosphoglycer 99.5 2.1E-13 4.4E-18 125.5 12.4 167 165-367 7-175 (379)
115 PRK10054 putative transporter; 99.5 6.3E-13 1.4E-17 122.9 15.3 176 155-367 9-186 (395)
116 PRK03699 putative transporter; 99.5 2E-12 4.3E-17 119.8 18.5 174 153-361 7-180 (394)
117 TIGR00711 efflux_EmrB drug res 99.5 3E-13 6.5E-18 128.9 13.3 177 155-367 4-181 (485)
118 KOG2615 Permease of the major 99.5 2.1E-13 4.5E-18 118.1 10.7 272 3-338 139-415 (451)
119 PRK10504 putative transporter; 99.5 7.7E-13 1.7E-17 125.6 15.9 176 154-365 11-187 (471)
120 PRK03893 putative sialic acid 99.5 1.1E-12 2.3E-17 125.6 16.8 179 152-366 19-197 (496)
121 TIGR00805 oat sodium-independe 99.5 9.4E-12 2E-16 121.0 23.5 217 2-246 190-415 (633)
122 PRK10207 dipeptide/tripeptide 99.5 3.1E-12 6.7E-17 121.0 19.6 146 205-362 314-474 (489)
123 TIGR00924 yjdL_sub1_fam amino 99.5 1.3E-12 2.8E-17 123.4 17.0 174 153-362 10-190 (475)
124 PF07690 MFS_1: Major Facilita 99.5 6.2E-13 1.3E-17 121.1 14.4 161 163-359 6-167 (352)
125 PRK11462 putative transporter; 99.5 5.1E-12 1.1E-16 118.9 20.5 249 6-338 131-388 (460)
126 TIGR00788 fbt folate/biopterin 99.5 4E-13 8.6E-18 126.5 13.0 299 4-365 140-447 (468)
127 PRK10473 multidrug efflux syst 99.5 1E-12 2.2E-17 121.7 15.5 174 159-368 9-183 (392)
128 COG2270 Permeases of the major 99.5 5.6E-12 1.2E-16 111.4 18.8 293 6-368 137-433 (438)
129 PRK15402 multidrug efflux syst 99.5 1.7E-12 3.7E-17 120.8 15.7 165 168-368 28-193 (406)
130 PRK11273 glpT sn-glycerol-3-ph 99.5 2.6E-12 5.6E-17 121.1 17.0 164 171-367 47-212 (452)
131 TIGR00900 2A0121 H+ Antiporter 99.5 1.1E-12 2.5E-17 120.0 14.0 165 168-363 14-178 (365)
132 PRK10207 dipeptide/tripeptide 99.5 3E-12 6.5E-17 121.0 17.0 175 150-359 11-189 (489)
133 TIGR00924 yjdL_sub1_fam amino 99.4 1.7E-11 3.8E-16 115.8 21.6 143 205-362 317-466 (475)
134 TIGR00879 SP MFS transporter, 99.4 1.2E-12 2.7E-17 124.3 13.9 142 205-367 76-220 (481)
135 PRK10091 MFS transport protein 99.4 1.8E-12 4E-17 119.5 14.0 178 154-367 4-182 (382)
136 TIGR00712 glpT glycerol-3-phos 99.4 2.5E-12 5.4E-17 120.8 14.7 181 154-367 28-210 (438)
137 PRK10077 xylE D-xylose transpo 99.4 2.6E-12 5.6E-17 122.3 14.8 151 205-367 60-218 (479)
138 TIGR00903 2A0129 major facilit 99.4 2.4E-12 5.1E-17 117.5 13.7 164 168-368 6-170 (368)
139 PRK11652 emrD multidrug resist 99.4 3.5E-12 7.6E-17 118.2 15.0 178 154-367 9-187 (394)
140 PRK10406 alpha-ketoglutarate t 99.4 7.3E-12 1.6E-16 117.4 17.0 188 155-367 24-222 (432)
141 PRK15403 multidrug efflux syst 99.4 3.9E-12 8.4E-17 118.3 15.0 158 175-368 38-196 (413)
142 KOG1330 Sugar transporter/spin 99.4 1.2E-13 2.5E-18 122.9 4.2 184 154-372 34-218 (493)
143 PRK05122 major facilitator sup 99.4 9.5E-12 2.1E-16 115.5 16.4 178 154-359 16-194 (399)
144 COG0738 FucP Fucose permease [ 99.4 4.8E-11 1E-15 104.9 19.3 275 4-357 124-402 (422)
145 PRK12382 putative transporter; 99.4 7.2E-12 1.6E-16 116.0 15.2 173 155-355 17-190 (392)
146 PRK11102 bicyclomycin/multidru 99.4 3.6E-12 7.8E-17 117.4 13.0 161 171-367 9-170 (377)
147 PRK09556 uhpT sugar phosphate 99.4 4.8E-12 1E-16 119.9 13.8 178 155-361 31-209 (467)
148 TIGR00894 2A0114euk Na(+)-depe 99.4 6.8E-12 1.5E-16 118.9 14.7 137 205-363 81-218 (465)
149 PRK09874 drug efflux system pr 99.4 1.8E-11 3.9E-16 114.0 16.5 176 159-366 20-196 (408)
150 TIGR00886 2A0108 nitrite extru 99.4 1.3E-11 2.9E-16 113.1 15.2 177 156-366 4-191 (366)
151 TIGR00890 2A0111 Oxalate/Forma 99.4 3.7E-12 8E-17 117.1 10.9 157 168-361 18-174 (377)
152 PRK10642 proline/glycine betai 99.4 2.6E-11 5.7E-16 115.4 17.0 189 154-367 17-216 (490)
153 PRK09584 tppB putative tripept 99.4 6.7E-11 1.4E-15 112.5 19.6 131 218-361 338-476 (500)
154 PRK11646 multidrug resistance 99.4 1.7E-11 3.7E-16 113.6 15.2 165 164-365 21-187 (400)
155 TIGR00892 2A0113 monocarboxyla 99.4 1.2E-11 2.6E-16 116.5 14.0 158 170-363 36-193 (455)
156 PRK11043 putative transporter; 99.4 2.4E-11 5.2E-16 112.9 15.6 155 175-365 28-182 (401)
157 PRK11195 lysophospholipid tran 99.3 1.7E-11 3.7E-16 113.3 14.4 154 174-367 24-177 (393)
158 PF01306 LacY_symp: LacY proto 99.3 4.2E-11 9.1E-16 108.1 16.2 182 154-367 221-404 (412)
159 PRK09584 tppB putative tripept 99.3 5E-11 1.1E-15 113.4 17.6 170 154-358 22-195 (500)
160 PRK10489 enterobactin exporter 99.3 1.2E-11 2.7E-16 115.4 13.3 172 165-367 29-200 (417)
161 cd06174 MFS The Major Facilita 99.3 1.4E-11 3.1E-16 112.0 13.2 166 160-361 6-171 (352)
162 PF03825 Nuc_H_symport: Nucleo 99.3 8.7E-11 1.9E-15 107.7 18.2 167 168-366 222-398 (400)
163 PRK09848 glucuronide transport 99.3 1.9E-10 4E-15 108.5 20.6 149 158-338 233-389 (448)
164 PRK15075 citrate-proton sympor 99.3 4.8E-11 1E-15 112.0 16.3 177 154-352 16-200 (434)
165 TIGR00898 2A0119 cation transp 99.3 4.4E-12 9.6E-17 121.5 9.3 155 174-367 110-267 (505)
166 PRK15034 nitrate/nitrite trans 99.3 5.4E-11 1.2E-15 109.9 15.9 180 154-363 35-231 (462)
167 TIGR00885 fucP L-fucose:H+ sym 99.3 6.6E-11 1.4E-15 109.8 16.7 175 155-360 5-203 (410)
168 TIGR00897 2A0118 polyol permea 99.3 5E-11 1.1E-15 110.7 15.6 160 157-348 17-177 (402)
169 PRK09952 shikimate transporter 99.3 1.1E-10 2.4E-15 109.6 17.8 145 207-367 71-223 (438)
170 KOG3626 Organic anion transpor 99.3 9.4E-10 2E-14 104.9 23.8 307 2-337 255-649 (735)
171 KOG4686 Predicted sugar transp 99.3 7.8E-11 1.7E-15 98.2 14.5 172 155-363 266-442 (459)
172 COG2223 NarK Nitrate/nitrite t 99.3 6.5E-11 1.4E-15 104.7 14.7 175 154-363 15-192 (417)
173 PRK09705 cynX putative cyanate 99.3 8.9E-11 1.9E-15 108.6 15.3 154 168-357 24-177 (393)
174 PRK03633 putative MFS family t 99.3 1.3E-10 2.8E-15 107.2 16.3 150 154-337 7-156 (381)
175 KOG3764 Vesicular amine transp 99.3 7.5E-12 1.6E-16 109.2 6.9 268 3-363 178-453 (464)
176 PTZ00207 hypothetical protein; 99.3 2.8E-10 6.1E-15 108.2 17.9 181 154-367 354-556 (591)
177 KOG0569 Permease of the major 99.3 5.3E-11 1.1E-15 109.6 12.6 147 204-370 64-211 (485)
178 PRK11010 ampG muropeptide tran 99.3 1.5E-10 3.3E-15 109.9 16.0 179 154-367 13-198 (491)
179 TIGR00899 2A0120 sugar efflux 99.3 1.4E-10 3.1E-15 106.7 15.3 170 162-367 6-180 (375)
180 TIGR00806 rfc RFC reduced fola 99.3 2.3E-10 5E-15 104.1 15.5 155 173-365 46-204 (511)
181 KOG2615 Permease of the major 99.3 3.6E-11 7.9E-16 104.4 9.8 113 201-336 69-181 (451)
182 TIGR00880 2_A_01_02 Multidrug 99.2 5.7E-11 1.2E-15 92.7 10.1 133 209-365 7-140 (141)
183 PTZ00207 hypothetical protein; 99.2 2.3E-10 5E-15 108.8 15.8 164 164-361 38-202 (591)
184 TIGR00805 oat sodium-independe 99.2 7.5E-11 1.6E-15 114.8 12.9 194 162-367 42-284 (633)
185 PRK10133 L-fucose transporter; 99.2 3.9E-10 8.4E-15 105.6 16.7 150 154-334 27-176 (438)
186 KOG2563 Permease of the major 99.2 3E-10 6.5E-15 101.2 14.6 282 8-365 164-451 (480)
187 PRK11902 ampG muropeptide tran 99.2 4E-10 8.7E-15 104.7 15.5 175 159-367 5-185 (402)
188 KOG0255 Synaptic vesicle trans 99.2 1.1E-10 2.4E-15 112.2 11.7 138 205-369 123-260 (521)
189 TIGR00806 rfc RFC reduced fola 99.2 5.2E-10 1.1E-14 101.9 15.2 72 4-99 134-208 (511)
190 PRK09528 lacY galactoside perm 99.2 5.7E-10 1.2E-14 104.3 15.2 176 155-363 12-190 (420)
191 TIGR01301 GPH_sucrose GPH fami 99.1 2E-09 4.3E-14 100.3 16.5 195 154-368 5-223 (477)
192 TIGR00883 2A0106 metabolite-pr 99.1 1E-09 2.2E-14 101.5 14.0 145 206-366 41-193 (394)
193 TIGR00901 2A0125 AmpG-related 99.1 7E-10 1.5E-14 101.4 12.6 159 173-366 8-181 (356)
194 KOG3764 Vesicular amine transp 99.1 1.8E-10 4E-15 100.7 7.8 136 204-363 110-246 (464)
195 PF03209 PUCC: PUCC protein; 99.1 2.7E-08 5.8E-13 88.6 21.2 272 6-361 111-395 (403)
196 TIGR00896 CynX cyanate transpo 99.1 1.1E-09 2.4E-14 100.0 12.7 150 171-356 18-167 (355)
197 KOG2532 Permease of the major 99.1 5.1E-09 1.1E-13 97.5 17.1 137 205-363 78-215 (466)
198 PRK15462 dipeptide/tripeptide 99.1 3.6E-08 7.7E-13 92.4 22.7 64 3-89 119-184 (493)
199 PRK08633 2-acyl-glycerophospho 99.1 3.5E-09 7.6E-14 111.7 18.1 114 205-337 52-165 (1146)
200 PF06609 TRI12: Fungal trichot 99.1 7.1E-10 1.5E-14 104.9 11.5 156 168-361 59-214 (599)
201 PRK06814 acylglycerophosphoeth 99.1 3.5E-09 7.7E-14 111.4 18.0 142 205-367 57-198 (1140)
202 PF03137 OATP: Organic Anion T 99.1 1.5E-11 3.2E-16 116.7 0.0 314 2-338 159-515 (539)
203 PRK15011 sugar efflux transpor 99.1 4.3E-09 9.4E-14 97.4 16.1 174 157-367 19-198 (393)
204 TIGR00882 2A0105 oligosacchari 99.1 2.3E-09 5E-14 99.4 14.1 177 155-362 4-181 (396)
205 PRK11128 putative 3-phenylprop 99.1 6.6E-09 1.4E-13 95.9 16.8 165 166-366 17-181 (382)
206 PF00083 Sugar_tr: Sugar (and 99.0 1.3E-11 2.8E-16 116.5 -2.3 145 205-368 51-196 (451)
207 TIGR00902 2A0127 phenyl propri 99.0 1.3E-08 2.8E-13 93.9 17.0 159 160-354 11-169 (382)
208 KOG2816 Predicted transporter 99.0 3.1E-08 6.7E-13 91.9 19.2 259 3-338 131-393 (463)
209 PF05977 MFS_3: Transmembrane 99.0 9E-09 1.9E-13 97.5 14.4 140 205-363 50-189 (524)
210 KOG0252 Inorganic phosphate tr 98.9 4.7E-09 1E-13 93.7 9.6 154 202-370 86-252 (538)
211 KOG0254 Predicted transporter 98.9 1.5E-08 3.3E-13 97.0 13.7 142 205-369 94-235 (513)
212 PF06813 Nodulin-like: Nodulin 98.9 4.3E-08 9.3E-13 83.0 14.5 168 164-363 13-181 (250)
213 COG3104 PTR2 Dipeptide/tripept 98.9 2.1E-08 4.7E-13 91.1 11.4 178 153-364 21-206 (498)
214 KOG2504 Monocarboxylate transp 98.8 2.1E-08 4.5E-13 94.7 10.8 168 160-363 53-220 (509)
215 COG0738 FucP Fucose permease [ 98.8 1.5E-07 3.2E-12 83.3 15.3 177 154-361 14-207 (422)
216 TIGR02718 sider_RhtX_FptX side 98.8 7.6E-08 1.6E-12 89.1 14.5 181 155-365 3-185 (390)
217 TIGR00792 gph sugar (Glycoside 98.8 8.3E-08 1.8E-12 90.3 14.6 170 169-367 15-198 (437)
218 KOG2533 Permease of the major 98.8 1.9E-07 4.1E-12 87.4 16.5 142 205-368 86-232 (495)
219 KOG0253 Synaptic vesicle trans 98.7 2.3E-07 5E-12 80.9 12.8 178 153-368 78-255 (528)
220 PRK09669 putative symporter Ya 98.7 4.1E-07 8.9E-12 85.7 14.4 175 164-366 20-207 (444)
221 TIGR00788 fbt folate/biopterin 98.6 8.2E-07 1.8E-11 84.0 13.6 177 154-367 27-212 (468)
222 TIGR00889 2A0110 nucleoside tr 98.6 1.2E-06 2.7E-11 81.7 14.3 63 174-248 23-87 (418)
223 KOG2325 Predicted transporter/ 98.6 6.2E-07 1.3E-11 82.5 11.8 188 151-368 32-234 (488)
224 PF03092 BT1: BT1 family; Int 98.6 4.8E-07 1E-11 84.4 10.5 151 205-367 260-416 (433)
225 PRK10429 melibiose:sodium symp 98.5 1.8E-06 4E-11 82.0 14.3 178 160-366 13-204 (473)
226 KOG2325 Predicted transporter/ 98.5 3.1E-07 6.8E-12 84.4 8.4 302 6-355 151-466 (488)
227 PF13347 MFS_2: MFS/sugar tran 98.5 7.7E-07 1.7E-11 83.4 11.2 171 168-365 16-200 (428)
228 KOG3762 Predicted transporter 98.5 4.9E-07 1.1E-11 82.7 8.6 133 205-361 411-544 (618)
229 PF01306 LacY_symp: LacY proto 98.5 5.2E-07 1.1E-11 81.8 8.2 173 156-363 10-187 (412)
230 COG3104 PTR2 Dipeptide/tripept 98.5 3.7E-06 8E-11 76.8 13.3 142 205-361 329-484 (498)
231 PF05631 DUF791: Protein of un 98.4 1.9E-05 4E-10 69.6 16.1 157 178-369 59-222 (354)
232 PF03825 Nuc_H_symport: Nucleo 98.4 9.6E-06 2.1E-10 74.7 14.8 163 169-367 18-183 (400)
233 KOG2816 Predicted transporter 98.4 6.9E-06 1.5E-10 76.5 13.1 137 209-372 71-208 (463)
234 PRK11462 putative transporter; 98.3 1.2E-05 2.7E-10 75.9 14.3 172 166-366 22-207 (460)
235 PF01770 Folate_carrier: Reduc 98.2 0.00012 2.7E-09 66.3 17.5 72 6-98 115-186 (412)
236 KOG2563 Permease of the major 98.2 2.4E-05 5.3E-10 70.5 11.9 119 205-338 84-203 (480)
237 KOG3098 Uncharacterized conser 98.1 0.00022 4.7E-09 65.9 17.3 127 203-334 282-411 (461)
238 COG2211 MelB Na+/melibiose sym 98.1 0.00012 2.5E-09 67.6 15.1 177 157-361 16-204 (467)
239 COG2807 CynX Cyanate permease 98.1 0.00012 2.5E-09 64.4 14.3 158 167-361 26-183 (395)
240 PRK09848 glucuronide transport 98.1 8.4E-05 1.8E-09 70.2 14.3 68 165-244 20-93 (448)
241 TIGR00926 2A1704 Peptide:H+ sy 98.1 7.6E-05 1.7E-09 72.9 14.1 135 213-361 36-179 (654)
242 PF06963 FPN1: Ferroportin1 (F 98.0 0.0006 1.3E-08 63.0 17.5 132 171-329 276-410 (432)
243 KOG3810 Micronutrient transpor 98.0 7.2E-05 1.6E-09 65.0 10.3 289 6-361 116-418 (433)
244 PF12832 MFS_1_like: MFS_1 lik 97.9 8E-05 1.7E-09 50.7 7.7 65 162-238 9-73 (77)
245 TIGR00880 2_A_01_02 Multidrug 97.8 7.1E-05 1.5E-09 57.8 6.7 70 3-95 70-140 (141)
246 PF03137 OATP: Organic Anion T 97.8 3.2E-06 6.9E-11 80.7 -1.3 180 175-366 25-252 (539)
247 PF11700 ATG22: Vacuole efflux 97.7 0.0013 2.8E-08 62.1 14.9 144 205-368 75-252 (477)
248 PF03209 PUCC: PUCC protein; 97.6 0.00089 1.9E-08 60.3 11.0 115 215-338 29-152 (403)
249 PF02487 CLN3: CLN3 protein; 97.6 0.0066 1.4E-07 55.3 16.7 58 277-334 337-394 (402)
250 PF01770 Folate_carrier: Reduc 97.6 0.0039 8.5E-08 56.8 15.1 128 217-367 58-185 (412)
251 PF07672 MFS_Mycoplasma: Mycop 97.5 0.0029 6.3E-08 53.3 12.7 57 16-90 2-58 (267)
252 KOG3626 Organic anion transpor 97.5 0.00074 1.6E-08 65.5 9.7 183 177-371 121-350 (735)
253 PF03092 BT1: BT1 family; Int 97.4 0.002 4.4E-08 60.3 11.4 155 177-365 14-177 (433)
254 TIGR00769 AAA ADP/ATP carrier 97.3 0.012 2.5E-07 55.3 15.8 119 217-335 61-189 (472)
255 TIGR00769 AAA ADP/ATP carrier 97.3 0.14 3.1E-06 48.1 24.2 40 6-45 151-190 (472)
256 PF05978 UNC-93: Ion channel r 97.3 0.007 1.5E-07 47.5 11.6 107 206-335 43-149 (156)
257 PF06779 DUF1228: Protein of u 97.2 0.0044 9.6E-08 42.6 8.3 72 167-250 6-77 (85)
258 COG0477 ProP Permeases of the 97.0 0.022 4.9E-07 50.1 14.2 129 205-353 44-174 (338)
259 PF06963 FPN1: Ferroportin1 (F 96.8 0.066 1.4E-06 49.7 14.9 142 205-361 43-197 (432)
260 TIGR00939 2a57 Equilibrative N 96.7 0.22 4.7E-06 46.7 18.0 38 294-331 391-428 (437)
261 KOG0637 Sucrose transporter an 96.7 0.0013 2.8E-08 59.7 2.9 37 5-41 163-200 (498)
262 PF13000 Acatn: Acetyl-coenzym 96.6 0.055 1.2E-06 50.3 13.1 42 296-337 426-467 (544)
263 KOG4686 Predicted sugar transp 96.4 0.0016 3.5E-08 55.4 1.6 115 205-338 84-199 (459)
264 TIGR01272 gluP glucose/galacto 96.3 0.008 1.7E-07 53.7 5.8 78 289-366 24-117 (310)
265 PF03219 TLC: TLC ATP/ADP tran 96.1 1.4 3E-05 41.9 23.0 40 6-45 166-205 (491)
266 KOG0637 Sucrose transporter an 96.1 0.03 6.4E-07 51.3 7.9 156 154-332 33-200 (498)
267 PF01733 Nucleoside_tran: Nucl 95.9 0.0018 3.9E-08 57.7 -0.5 39 292-330 265-303 (309)
268 KOG1479 Nucleoside transporter 95.9 0.44 9.5E-06 43.5 14.4 49 281-329 349-397 (406)
269 PF02487 CLN3: CLN3 protein; 95.7 0.12 2.5E-06 47.4 10.2 125 209-361 68-192 (402)
270 COG2270 Permeases of the major 95.7 0.16 3.4E-06 46.3 10.9 142 205-365 63-222 (438)
271 COG3202 ATP/ADP translocase [E 95.6 1.7 3.7E-05 40.6 17.3 39 7-45 171-209 (509)
272 COG3202 ATP/ADP translocase [E 95.4 1.2 2.5E-05 41.7 15.4 124 213-337 75-210 (509)
273 PF00854 PTR2: POT family; In 95.3 0.09 2E-06 48.3 8.4 117 231-362 2-121 (372)
274 PF03219 TLC: TLC ATP/ADP tran 95.1 0.39 8.5E-06 45.5 12.0 123 214-336 73-205 (491)
275 KOG1237 H+/oligopeptide sympor 94.7 1.9 4.2E-05 41.9 15.9 145 212-360 85-241 (571)
276 KOG3762 Predicted transporter 94.6 0.016 3.5E-07 54.0 1.5 67 165-243 23-89 (618)
277 PF00854 PTR2: POT family; In 94.3 0.28 6E-06 45.1 9.0 66 4-92 53-121 (372)
278 KOG1479 Nucleoside transporter 93.8 2.7 5.9E-05 38.5 13.8 30 154-183 19-48 (406)
279 KOG3574 Acetyl-CoA transporter 93.8 0.75 1.6E-05 41.5 9.9 44 295-338 389-432 (510)
280 KOG3098 Uncharacterized conser 93.7 1 2.2E-05 42.2 11.2 106 206-334 56-161 (461)
281 TIGR00926 2A1704 Peptide:H+ sy 93.4 9.2 0.0002 38.1 18.3 72 3-90 104-178 (654)
282 KOG3574 Acetyl-CoA transporter 93.3 1.2 2.7E-05 40.2 10.4 68 153-235 31-103 (510)
283 PRK03612 spermidine synthase; 93.1 4.1 8.8E-05 39.3 14.7 42 310-353 144-186 (521)
284 PF13000 Acatn: Acetyl-coenzym 93.0 1.6 3.4E-05 41.0 11.1 34 299-332 142-175 (544)
285 PF05631 DUF791: Protein of un 91.8 9.5 0.00021 34.4 16.8 41 205-245 283-324 (354)
286 TIGR00939 2a57 Equilibrative N 90.5 2.4 5.1E-05 39.9 9.7 25 212-236 57-81 (437)
287 PF06813 Nodulin-like: Nodulin 87.6 1.9 4E-05 37.0 6.3 67 7-97 119-185 (250)
288 KOG4332 Predicted sugar transp 87.0 0.48 1E-05 40.5 2.3 46 179-236 63-108 (454)
289 KOG1237 H+/oligopeptide sympor 85.0 41 0.00089 33.0 15.5 36 302-337 485-520 (571)
290 KOG2881 Predicted membrane pro 77.1 46 0.00099 28.5 11.4 34 206-239 246-279 (294)
291 KOG4332 Predicted sugar transp 76.8 50 0.0011 28.8 14.1 139 205-360 287-427 (454)
292 PF11947 DUF3464: Protein of u 76.5 10 0.00022 29.5 5.9 32 295-326 114-145 (153)
293 PF07857 DUF1632: CEO family ( 73.6 57 0.0012 28.1 10.2 58 306-363 74-135 (254)
294 PF05297 Herpes_LMP1: Herpesvi 71.1 1.2 2.5E-05 37.9 -0.3 17 351-367 173-189 (381)
295 PF02990 EMP70: Endomembrane p 70.6 60 0.0013 31.5 11.0 24 206-229 303-326 (521)
296 COG0477 ProP Permeases of the 70.4 9 0.0002 33.2 5.3 62 3-85 113-176 (338)
297 PF03547 Mem_trans: Membrane t 69.9 17 0.00038 33.5 7.1 9 219-227 14-22 (385)
298 PF11151 DUF2929: Protein of u 68.5 27 0.00058 22.0 5.5 30 68-97 27-56 (57)
299 PRK10263 DNA translocase FtsK; 66.7 62 0.0013 34.8 10.5 19 210-228 62-80 (1355)
300 COG5336 Uncharacterized protei 66.3 13 0.00028 26.7 4.0 27 218-244 60-87 (116)
301 PF10183 ESSS: ESSS subunit of 65.7 19 0.0004 26.2 5.0 39 59-97 46-85 (105)
302 COG5336 Uncharacterized protei 60.1 40 0.00088 24.3 5.5 35 305-339 36-70 (116)
303 KOG3097 Predicted membrane pro 60.1 1.3E+02 0.0029 27.1 12.3 26 213-238 71-96 (390)
304 KOG3880 Predicted small molecu 59.0 1.1E+02 0.0023 27.5 9.0 61 274-334 341-401 (409)
305 TIGR02230 ATPase_gene1 F0F1-AT 57.0 70 0.0015 22.9 6.4 29 214-242 57-85 (100)
306 KOG3810 Micronutrient transpor 56.7 13 0.00029 33.4 3.4 73 295-367 114-186 (433)
307 KOG2601 Iron transporter [Inor 55.1 1.8E+02 0.0038 27.0 11.3 44 310-355 174-217 (503)
308 PF06027 DUF914: Eukaryotic pr 54.7 1.2E+02 0.0026 27.5 9.1 19 342-360 285-303 (334)
309 PF15061 DUF4538: Domain of un 51.3 28 0.00061 21.9 3.2 21 70-90 3-23 (58)
310 COG1288 Predicted membrane pro 49.1 2.3E+02 0.005 26.6 11.2 31 68-98 214-246 (481)
311 PF04341 DUF485: Protein of un 47.3 97 0.0021 21.7 6.6 33 150-182 13-45 (91)
312 KOG3880 Predicted small molecu 43.9 26 0.00057 31.1 3.2 87 278-368 117-206 (409)
313 PF06779 DUF1228: Protein of u 39.0 1.3E+02 0.0028 20.8 6.7 23 22-44 29-51 (85)
314 PF04281 Tom22: Mitochondrial 38.7 1E+02 0.0022 23.6 5.2 25 9-33 60-84 (137)
315 KOG1277 Endosomal membrane pro 37.1 3.7E+02 0.008 25.5 9.8 23 208-230 335-358 (593)
316 PF04281 Tom22: Mitochondrial 36.6 86 0.0019 24.0 4.6 22 300-321 60-81 (137)
317 KOG4830 Predicted sugar transp 35.9 35 0.00076 29.5 2.7 48 173-232 37-93 (412)
318 TIGR02230 ATPase_gene1 F0F1-AT 35.5 1.7E+02 0.0036 21.0 7.5 22 23-44 46-67 (100)
319 PF02659 DUF204: Domain of unk 35.3 1.2E+02 0.0027 19.5 5.2 30 205-234 29-58 (67)
320 TIGR00986 3a0801s05tom22 mitoc 35.2 77 0.0017 24.3 4.1 22 300-321 58-79 (145)
321 COG2274 SunT ABC-type bacterio 33.3 2.5E+02 0.0055 28.5 8.5 23 205-227 162-184 (709)
322 TIGR00986 3a0801s05tom22 mitoc 32.8 1E+02 0.0023 23.7 4.4 23 8-30 57-79 (145)
323 PF04024 PspC: PspC domain; I 32.3 1.2E+02 0.0026 19.4 4.1 30 68-97 27-60 (61)
324 KOG1278 Endosomal membrane pro 30.2 22 0.00049 33.8 0.7 18 230-247 397-414 (628)
325 PF12273 RCR: Chitin synthesis 29.1 28 0.0006 26.4 1.0 16 73-88 1-16 (130)
326 PF07857 DUF1632: CEO family ( 27.8 4E+02 0.0087 23.0 9.5 25 71-95 113-137 (254)
327 TIGR02185 Trep_Strep conserved 27.7 2.5E+02 0.0055 22.9 6.4 27 205-231 160-186 (189)
328 TIGR00145 FTR1 family protein. 27.6 4.3E+02 0.0093 23.3 12.9 26 20-45 36-61 (283)
329 COG2119 Predicted membrane pro 26.3 2E+02 0.0044 23.3 5.2 35 205-239 139-173 (190)
330 PF02554 CstA: Carbon starvati 26.2 5.2E+02 0.011 23.8 17.0 29 11-40 48-77 (376)
331 PF01405 PsbT: Photosystem II 25.5 1.2E+02 0.0025 16.1 3.1 11 88-98 18-28 (29)
332 PF08611 DUF1774: Fungal prote 24.1 2.7E+02 0.0058 19.9 4.9 21 341-361 51-71 (97)
333 PRK11875 psbT photosystem II r 23.2 1.4E+02 0.0029 16.0 3.0 10 90-99 20-29 (31)
334 PF05255 UPF0220: Uncharacteri 22.8 4E+02 0.0086 21.3 8.7 24 71-94 56-79 (166)
335 COG3162 Predicted membrane pro 22.7 2.9E+02 0.0064 19.7 6.8 29 153-181 24-52 (102)
336 PF14362 DUF4407: Domain of un 22.7 5.4E+02 0.012 22.8 8.4 30 14-43 8-37 (301)
337 PF03606 DcuC: C4-dicarboxylat 22.3 3.6E+02 0.0077 25.8 7.2 10 222-231 106-115 (465)
338 PF13536 EmrE: Multidrug resis 22.1 3.1E+02 0.0068 19.8 7.9 15 223-237 82-96 (113)
339 PRK11715 inner membrane protei 22.1 6.2E+02 0.013 24.0 8.4 19 298-316 374-392 (436)
340 PRK15015 carbon starvation pro 21.5 8.5E+02 0.018 24.6 16.1 32 10-41 78-109 (701)
341 PF06123 CreD: Inner membrane 21.2 4.8E+02 0.01 24.7 7.5 18 298-315 368-385 (430)
342 CHL00031 psbT photosystem II p 20.6 1.7E+02 0.0036 16.0 2.8 11 89-99 19-29 (33)
343 PF01733 Nucleoside_tran: Nucl 20.0 35 0.00075 30.4 0.0 15 293-308 15-29 (309)
No 1
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=1.2e-34 Score=275.85 Aligned_cols=357 Identities=49% Similarity=0.809 Sum_probs=229.4
Q ss_pred CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073 2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV 81 (402)
Q Consensus 2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i 81 (402)
++..++|++|++|+++||+++++.+.+..+|.++++.++..+...+....+.......+.-.......++||+++.++++
T Consensus 133 ~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~i 212 (502)
T TIGR00887 133 YPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAV 212 (502)
T ss_pred hHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHH
Confidence 46778999999999999999999999999999999999887653222110000000000000000123589999999999
Q ss_pred HHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCC----CccccccchhhhhhhhhHHHHH
Q 045073 82 PAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSP----EASTYGLFSKEFVQKHGLHLLG 157 (402)
Q Consensus 82 ~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 157 (402)
++++.++.++++||||||+..++++++++.+.+.+..+.+.+++.++.++.+++ +...+++++....++..+.++.
T Consensus 213 p~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 292 (502)
T TIGR00887 213 PALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLG 292 (502)
T ss_pred HHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHH
Confidence 999888888899999999865444434455555555443322222111111110 1122233333323333344444
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHH
Q 045073 158 TTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGF 237 (402)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~ 237 (402)
....++...+.+|+...+.|.++++.|++....+...+............+..++.+++.+++++++||+|||+.++.+.
T Consensus 293 ~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~ 372 (502)
T TIGR00887 293 TAGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGF 372 (502)
T ss_pred HHHHHHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHH
Confidence 45555666677888888899999888887543221111111111222334455667778889999999999999998888
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHH
Q 045073 238 LLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISA 317 (402)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~ 317 (402)
.+++++++++....... . .. ....++.....+...+..+..+.+.+|++|++.|+++.|+.+
T Consensus 373 ~~~~~~~~~l~~~~~~~--~--------------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~ 434 (502)
T TIGR00887 373 FILTVLFFVLGFAYNHL--S--------------TH--GFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISA 434 (502)
T ss_pred HHHHHHHHHHHHHHHhc--c--------------hh--HHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHH
Confidence 77777666555432100 0 11 122222222233345666778888999999999999999999
Q ss_pred HHHHHhHHHHhHhHHhhhhccC--------CcchhhHHHHHHHHHHHhhheeeeeccCCcccccccc
Q 045073 318 AAGKAGAIVGAFGVQYYTQKGD--------KQIKQSIITLAVVNFLGFLCSFMVPETNGLSLEELSG 376 (402)
Q Consensus 318 ~~~~~g~~i~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~i~~~~~~et~~~~~~~~~~ 376 (402)
.+++++++++|.+.+.+.+..+ .++..++++++++++++.+..+++|||+++++||+++
T Consensus 435 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~~~leei~~ 501 (502)
T TIGR00887 435 ASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPETKGKSLEELSG 501 (502)
T ss_pred HHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEeccCCCCCHHhhhC
Confidence 9999999999999998887421 1345678888888888777766779999998877654
No 2
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.9e-34 Score=258.59 Aligned_cols=326 Identities=19% Similarity=0.239 Sum_probs=254.5
Q ss_pred cchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHH
Q 045073 4 LSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPA 83 (402)
Q Consensus 4 ~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~ 83 (402)
..+.|+.|.+|++.||....+.+.+..+|.+++..++..-. .+....|++.+.+..+++
T Consensus 136 ~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~i---------------------lGt~~~W~~l~~~~~i~~ 194 (485)
T KOG0569|consen 136 LVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSL---------------------LGTEDLWPYLLAFPLIPA 194 (485)
T ss_pred HHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHh---------------------cCCCcchHHHHHHHHHHH
Confidence 46789999999999999999999999999999988776543 235567999999999999
Q ss_pred HHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhcccccccccc-----CCC---CCCCCCccccccchhhhhhhhhHHH
Q 045073 84 ALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATS-----AYP---VPVSPEASTYGLFSKEFVQKHGLHL 155 (402)
Q Consensus 84 ~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (402)
++.++...++||||+|+..++++++++.+.++..++.+.+++.. +.+ ..+.++.+.++.++++..|+. ..
T Consensus 195 ~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~--~~ 272 (485)
T KOG0569|consen 195 LLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRP--LL 272 (485)
T ss_pred HHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHH--HH
Confidence 99999999999999999877788888888888887765322211 111 111234456677777666653 34
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHH
Q 045073 156 LGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLG 235 (402)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~ 235 (402)
+.+.+....+..+.+....|...++++.|++..++.. .+....+..++.++++.+++||+|||++++.
T Consensus 273 i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~------------an~~~g~v~~~~t~~~~~lid~~gRRpLll~ 340 (485)
T KOG0569|consen 273 IGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQY------------ANLGIGIVNLLSTLVSPFLIDRLGRRPLLLI 340 (485)
T ss_pred HHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHhcCCcHHHHH
Confidence 4555555566678888999999999999999887665 6777778888888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHH--HHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073 236 GFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAW--FMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH 313 (402)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 313 (402)
+..++.++.+++.......... ..+.. .+.........+..|.+|+.|.+.+|++|++.|+.+.
T Consensus 341 ~~~~~~~~~~~~~~~~~l~~~~--------------~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~ 406 (485)
T KOG0569|consen 341 SLSLMAVALLLMSIALFLSNSF--------------GSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQ 406 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh--------------hhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHH
Confidence 9999988887777654432211 11122 2333444455667889999999999999999999999
Q ss_pred hHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccCCccccccccchhhh
Q 045073 314 GISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETNGLSLEELSGEDKEI 381 (402)
Q Consensus 314 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~~~~~~~~~~~~~~~ 381 (402)
++....+++..++..+.++.+.+.. |. ..|+++.+.+++..+..+ ++||||+|+.+|+.++.++.
T Consensus 407 s~~~~~~w~~~fiv~~~fp~l~~~~--g~-~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 407 SVATAVNWLSNFIVGFAFPPLQNVI--GP-YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--cc-hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 9999999999999999999999877 33 788888888888877776 45999999998887765443
No 3
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-34 Score=252.54 Aligned_cols=348 Identities=56% Similarity=0.943 Sum_probs=284.3
Q ss_pred CCCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhH
Q 045073 1 DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGA 80 (402)
Q Consensus 1 ~~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~ 80 (402)
|||.+.+..+|.+..++||...+.+.+.+++|.+.|.+++..+...+.+..+++ ..+..-..-||..+.+++
T Consensus 161 DYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~--------~~~~~ld~vWRl~~glg~ 232 (538)
T KOG0252|consen 161 DYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGP--------STYPHLDGVWRIIFGLGA 232 (538)
T ss_pred CCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCC--------CCchHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999998887776543332 111123456999999999
Q ss_pred HHHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073 81 VPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS 160 (402)
Q Consensus 81 i~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (402)
+|+++.+..++.||||+||..+..++.+.+.++..+....+.+++.+. +...+..+....+|...+.+++-+.++..+.
T Consensus 233 vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~-~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~ 311 (538)
T KOG0252|consen 233 VPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTA-ESDVPPPSNSFGLFSRLFLRWHGKHLLGTAG 311 (538)
T ss_pred HHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhcc-ccCCCCcccccchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999976666666666655555555443333332 2222334455567777777777789999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073 161 TWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240 (402)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~ 240 (402)
.||...+.+|...++...+++++|+.+..... ...+..+.....+..++.++|..+..+++|++|||+..+.+++++
T Consensus 312 ~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~---~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~ 388 (538)
T KOG0252|consen 312 TWFLLDIAFYGQNLFQSVIFSAIGVIPSANTY---HELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIM 388 (538)
T ss_pred HHHhhhhhhhccccHHHHHHHhhccCCCcchH---HHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHH
Confidence 99999999999999999999999988876543 444456666777778888899999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG 320 (402)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~ 320 (402)
++..+.++..+.. . .....+++++.+..++..+|++..++.+.+|.+|++.|+++.|+..+.+
T Consensus 389 ~i~~~~~~~~y~~---~--------------~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~G 451 (538)
T KOG0252|consen 389 TIFFFVIAGPYNQ---L--------------ENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASG 451 (538)
T ss_pred HHHHHHHcCCccc---c--------------cccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhc
Confidence 8888877775432 1 2234677788888888899999999999999999999999999999999
Q ss_pred HHhHHHHhHhHHhhhh-----ccCCcchhhHHHHHHHHHHHhhheeeeeccCCccccccccchh
Q 045073 321 KAGAIVGAFGVQYYTQ-----KGDKQIKQSIITLAVVNFLGFLCSFMVPETNGLSLEELSGEDK 379 (402)
Q Consensus 321 ~~g~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~~~~~~~~~~~~~ 379 (402)
.+|++++...+.++.+ .. +.+.++++++++++++.+..+++|||++++++|++++.+
T Consensus 452 K~GAivg~~~F~~~t~~~yp~~~--g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~leei~~e~~ 513 (538)
T KOG0252|consen 452 KAGAIVGAFGFLYLTDHNYPPNI--GVRNVFIILAGCMLLGILFTLLIPETKGKSLEEISNEEE 513 (538)
T ss_pred cchHHHHHHHhhHhhhccCCccc--cchHHHHHHHHHHHHhHheeEEeecccccCHHHhcChhh
Confidence 9999999999999988 44 788999999999999999999999999999998865533
No 4
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.97 E-value=1.3e-29 Score=245.23 Aligned_cols=333 Identities=18% Similarity=0.269 Sum_probs=224.7
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
|++.++++|++|+++||+.++++.+++.+|.++++.++..+....+.... .+......+||+++++++++
T Consensus 274 p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~----------~g~~~~~~gWR~l~~i~~lp 343 (742)
T TIGR01299 274 PIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQ----------MGSAYQFHSWRVFVIVCAFP 343 (742)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhc----------cccccccccHHHHHHHHHHH
Confidence 56789999999999999999999999999999999988777632211000 00011345899999999999
Q ss_pred HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhcccccccc-----------------ccCCCCCCCCCc--------
Q 045073 83 AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVA-----------------TSAYPVPVSPEA-------- 137 (402)
Q Consensus 83 ~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~-------- 137 (402)
+++.++..+++||||+|+.. +++.+++.+.+++..+.+.... .++..+.++...
T Consensus 344 ~ll~ll~~~~lPESPrwL~~-~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (742)
T TIGR01299 344 CVFAIGALTFMPESPRFFLE-NGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFV 422 (742)
T ss_pred HHHHHHHHHHcCCCHHHHHH-CCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchh
Confidence 98888888899999999854 4566667666666654332100 000000000000
Q ss_pred -------cccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhc----------------------Ccchh
Q 045073 138 -------STYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPAT----------------------GIVRK 188 (402)
Q Consensus 138 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------g~~~~ 188 (402)
..|..++.-+.++.++.++.+++.++...+++|+...|+|.+++.. +++..
T Consensus 423 ~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (742)
T TIGR01299 423 RALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLE 502 (742)
T ss_pred hhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchh
Confidence 0011122222223445788888899999999999999999886442 00000
Q ss_pred hh-------------hh-----------------------------hhH----------------H--------------
Q 045073 189 AA-------------AM-----------------------------DAI----------------E-------------- 196 (402)
Q Consensus 189 ~~-------------~~-----------------------------~~~----------------~-------------- 196 (402)
.. ++ +.+ .
T Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (742)
T TIGR01299 503 NQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEG 582 (742)
T ss_pred hhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCc
Confidence 00 00 000 0
Q ss_pred ---------HHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCc
Q 045073 197 ---------EVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLH 267 (402)
Q Consensus 197 ---------~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (402)
..........++..++.++|.+++|+++||+|||+++.++.++.+++++++.+.
T Consensus 583 c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~----------------- 645 (742)
T TIGR01299 583 CPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFG----------------- 645 (742)
T ss_pred cCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-----------------
Confidence 000112334566778899999999999999999999999988888877766553
Q ss_pred cccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHH
Q 045073 268 EYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSII 347 (402)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~ 347 (402)
.+....+++.. +.+++..+..+..+++++|++|++.|++++|+.+..+++|++++|++.+.+.+. +...+|+
T Consensus 646 ----~s~~~ll~~~~-l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~---~~~~pf~ 717 (742)
T TIGR01299 646 ----NSESAMIALLC-LFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI---TKAAPIL 717 (742)
T ss_pred ----ccHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhHHHHH
Confidence 12222222222 223333445567888999999999999999999999999999999999887764 5567888
Q ss_pred HHHHHHHHHhhheeeeeccCCccc
Q 045073 348 TLAVVNFLGFLCSFMVPETNGLSL 371 (402)
Q Consensus 348 ~~~~~~~i~~i~~~~~~et~~~~~ 371 (402)
+++++.+++.++.+++|||+++.+
T Consensus 718 i~a~~lll~~ll~~~LPET~~~~l 741 (742)
T TIGR01299 718 FASAALACGGLLALKLPDTRGQVL 741 (742)
T ss_pred HHHHHHHHHHHHHHhCCCCccccc
Confidence 888888888777777899988754
No 5
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.96 E-value=3e-27 Score=224.30 Aligned_cols=303 Identities=16% Similarity=0.162 Sum_probs=189.7
Q ss_pred CCCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhH
Q 045073 1 DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGA 80 (402)
Q Consensus 1 ~~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~ 80 (402)
+++.+.++++|++|+++||++.++.+.+..+|.++++.+...+.....+. ....+|||++|++++
T Consensus 135 ~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~---------------~~~~~gWR~~f~i~~ 199 (490)
T PRK10642 135 EYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEA---------------NFLDWGWRIPFFIAL 199 (490)
T ss_pred hHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH---------------HhcCccHHHHHHHHH
Confidence 45678899999999999999999999999999998887776654322110 113589999999988
Q ss_pred HHHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073 81 VPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS 160 (402)
Q Consensus 81 i~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (402)
+++++.++++.++||||+|...+++.+++.. +...+ +++... ....+++++.+.....
T Consensus 200 ~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~---------------~~~~~--~~~~~~-----~~~~~~~~~~~~~~~~ 257 (490)
T PRK10642 200 PLGIIGLYLRHALEETPAFQQHVDKLEQGDR---------------EGLQD--GPKVSF-----KEIATKHWRSLLTCIG 257 (490)
T ss_pred HHHHHHHHHHHcCCCChhHHHHHHhhhhhcc---------------ccccc--cccCCH-----HHHHHHhHHHHHHHHH
Confidence 7777777777789999998532111000000 00000 000111 1122222233333333
Q ss_pred HHHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073 161 TWFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL 239 (402)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~ 239 (402)
..+.....+|....|.|.+++ ..|++...... ......++.+++.++.|+++||+|||+.+..+.++
T Consensus 258 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~ 325 (490)
T PRK10642 258 LVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVL------------IIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVA 325 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 444555678888889999885 46777654332 45556777888888999999999999988777654
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073 240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA 319 (402)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 319 (402)
..+..+.+..... ......+.+..+..++...........+..|.+|++.|+++.|+.+..
T Consensus 326 ~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~ 386 (490)
T PRK10642 326 LFVLAIPAFILIN-------------------SNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNI 386 (490)
T ss_pred HHHHHHHHHHHHh-------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHH
Confidence 3332222111111 111112211111111111111223455668999999999999987777
Q ss_pred HHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccCCcccc
Q 045073 320 GKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETNGLSLE 372 (402)
Q Consensus 320 ~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~~~~~~ 372 (402)
..+++.++|.+.+++.+..+ ++..++++..++++++.+..+++||++++..+
T Consensus 387 ~~~~g~~~p~i~g~l~~~~~-~~~~~~~~~~~~~~i~~~~~~~~pes~~~~~~ 438 (490)
T PRK10642 387 SVLVAGLTPTLAAWLVESTQ-NLMMPAYYLMVVAVIGLITGVTMKETANRPLK 438 (490)
T ss_pred HHHHHHHHHHHHHHHHHHhC-CchHHHHHHHHHHHHHHHHHHHhccccCCCCC
Confidence 88888899999998877542 45666666666667666666667998776554
No 6
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=1.7e-26 Score=196.67 Aligned_cols=315 Identities=17% Similarity=0.257 Sum_probs=220.4
Q ss_pred CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073 2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV 81 (402)
Q Consensus 2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i 81 (402)
+|...++-.|..|..+|+..+... ..+.+|.++...++.... .+.||||..+...+
T Consensus 183 ~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm-----------------------~~~gwr~~l~~~~~ 238 (528)
T KOG0253|consen 183 LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVM-----------------------SNFGWRYLLFTSST 238 (528)
T ss_pred ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHH-----------------------HhhhHHHHHHHHHh
Confidence 456667788999999999998888 899999999999999887 67899999999888
Q ss_pred HHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhcccccc----------------ccccCCCCC-----CCCCcccc
Q 045073 82 PAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLT----------------VATSAYPVP-----VSPEASTY 140 (402)
Q Consensus 82 ~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~-----~~~~~~~~ 140 (402)
|..+.....+++||||||+.. +++++++.+.++++.+.|.. +|..+..+. ++......
T Consensus 239 pl~~~a~f~~w~~ESpRf~~~-~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~ 317 (528)
T KOG0253|consen 239 PLMFAARFLVWVYESPRFYLA-KGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTT 317 (528)
T ss_pred HHHHHHHHHhhcccCcchhhh-cCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchH
Confidence 888888888999999999865 77788888888776654411 111111111 11112223
Q ss_pred ccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcC---cch----hhhhhhhH-HHHHHHhHHHHHHHHhh
Q 045073 141 GLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPATG---IVR----KAAAMDAI-EEVFRISKAMFLVALFA 212 (402)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~ 212 (402)
+++... +| +..+..+..+|.....+|+.......+++... ... .+...... +........-..+..+.
T Consensus 318 nLlsp~-lr---kttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitsla 393 (528)
T KOG0253|consen 318 NLLSPK-LR---KTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLA 393 (528)
T ss_pred hhcChH-HH---HHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHh
Confidence 333333 23 35677788888888899998887777665422 111 11110000 00111222245566788
Q ss_pred hhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCC
Q 045073 213 TVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGP 292 (402)
Q Consensus 213 ~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (402)
.++|.++.++++||+|||+.+..++++++++.+.+.... ... ....+....-.+ ..+.
T Consensus 394 efPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~--------------------~rn-~~tvllf~araf-isg~ 451 (528)
T KOG0253|consen 394 EFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCK--------------------TRN-AYTVLLFTARAF-ISGA 451 (528)
T ss_pred hCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhc--------------------Ccc-hhHHHHHHHHHH-Hhch
Confidence 999999999999999999999999888888776665532 111 222222222233 3344
Q ss_pred ccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee-eccCCccc
Q 045073 293 NSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV-PETNGLSL 371 (402)
Q Consensus 293 ~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~et~~~~~ 371 (402)
+.+.+.|+.|++|+..|+++.|.+...+++|+++.|++. ...+. +...+..+++++++++.+.+.++ -|||+|.+
T Consensus 452 fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e~---s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 452 FQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAEL---STSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred heEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhcc---ceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 558999999999999999999999999999999999888 33222 45567778888888888888888 49998864
No 7
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.96 E-value=2.8e-27 Score=224.78 Aligned_cols=325 Identities=19% Similarity=0.208 Sum_probs=203.8
Q ss_pred CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073 2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV 81 (402)
Q Consensus 2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i 81 (402)
+|.+.++++|++|+++||+++++.+.+..+|.++++.++..+....... .....+||+.|++.++
T Consensus 138 ~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~---------------~~~~~gWr~~f~~~~~ 202 (479)
T PRK10077 138 SMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDAS---------------WLNTDGWRYMFASEAI 202 (479)
T ss_pred hhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCccc---------------ccccCChHHHHHHHHH
Confidence 4667899999999999999999999999999999988877664211000 1145799999999888
Q ss_pred HHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccc-cccCCCCC-CCCCccccccchhhhhhhhhHHHHHHH
Q 045073 82 PAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTV-ATSAYPVP-VSPEASTYGLFSKEFVQKHGLHLLGTT 159 (402)
Q Consensus 82 ~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (402)
+.++..+..+++||+|+|+.. +++.+++.+...+..+.+..+ ..++..+. ..++......+. . ..........
T Consensus 203 ~~~~~~~~~~~l~~s~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~ 277 (479)
T PRK10077 203 PALLFLMLLYFVPETPRYLMS-RGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLM--F--GVGVIVIGVM 277 (479)
T ss_pred HHHHHHHHHHcCCCCcHHHHH-cCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcc--h--hHHHHHHHHH
Confidence 887777777789999998643 333333333333222111000 00000000 000000000000 0 0000111111
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073 160 STWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL 239 (402)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~ 239 (402)
...+.....++...++.|.+.++.|.+...... ......+..+++.+++++++||+|||++++.+.++
T Consensus 278 ~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~------------~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~ 345 (479)
T PRK10077 278 LSVFQQFVGINVVLYYAPEIFKTLGASTDIALL------------QTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALG 345 (479)
T ss_pred HHHHHHHhChhHHHHHHHHHHHHcCCCCchHHH------------HHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHH
Confidence 222233344556667788888888877654332 44556677788889999999999999999999888
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073 240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA 319 (402)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 319 (402)
++++.+++...... . ...............+...+..+..+.+++|.+|++.|+++.|+.+..
T Consensus 346 ~~v~~~~l~~~~~~--~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~ 408 (479)
T PRK10077 346 MAIGMFSLGTAFYT--Q---------------APGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAA 408 (479)
T ss_pred HHHHHHHHHHHHhc--C---------------cccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHH
Confidence 88877766543211 0 111122222222222223344567788999999999999999999999
Q ss_pred HHHhHHHHhHhHHhhh------hccCCcchhhHHHHHHHHHHHhhheee-eeccCCccccccccc
Q 045073 320 GKAGAIVGAFGVQYYT------QKGDKQIKQSIITLAVVNFLGFLCSFM-VPETNGLSLEELSGE 377 (402)
Q Consensus 320 ~~~g~~i~~~~~~~~~------~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~et~~~~~~~~~~~ 377 (402)
++++.++++.+.+.+. +.. ++...|+++++.++++.++.++ .||+|+++.+|.++.
T Consensus 409 ~~~g~~~~~~~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 471 (479)
T PRK10077 409 QWIANYFVSWTFPMMDKNSWLVAHF--HNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEAL 471 (479)
T ss_pred HHHHHHHHHHHhHHHHhccchhhhc--cCccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHH
Confidence 9999999987776554 233 6677888888777777766654 599998877655433
No 8
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.95 E-value=1.8e-26 Score=219.80 Aligned_cols=325 Identities=22% Similarity=0.266 Sum_probs=229.8
Q ss_pred cchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHH
Q 045073 4 LSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPA 83 (402)
Q Consensus 4 ~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~ 83 (402)
+++.|++|++|++.||...+..+....+|..++..++....+ ..++||..+.++.+++
T Consensus 162 ~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~----------------------~~~~Wr~~~~~~~i~~ 219 (513)
T KOG0254|consen 162 LAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSK----------------------VYAGWRIPLGLALIPA 219 (513)
T ss_pred cchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhcc----------------------CCccHHHHHHHHHHHH
Confidence 568999999999999999999999999999999666665530 1168999999999999
Q ss_pred HHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhcccc---ccccccCCC-----CCC-CCCc-cccccchhhhhhhhhH
Q 045073 84 ALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTD---LTVATSAYP-----VPV-SPEA-STYGLFSKEFVQKHGL 153 (402)
Q Consensus 84 ~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-----~~~-~~~~-~~~~~~~~~~~~~~~~ 153 (402)
++..+..+++||||+|+.. +++.+++.+.+.+..+.+ .+.+.++.. +.. ...+ ...+++. +. ...+
T Consensus 220 ~~~~~~~~~~pesp~~L~~-~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~--~~~~ 295 (513)
T KOG0254|consen 220 VILALGMLFLPESPRWLIE-KGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFS-PK--VRKR 295 (513)
T ss_pred HHHHHHHHhCCCChHHHHH-cCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcC-cc--hHHH
Confidence 9988888889999999854 566666777777666622 111111111 000 0111 1122222 11 1112
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073 154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ 233 (402)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~ 233 (402)
..+...+..+.+..+.+....|.+.+++..|.+... .. ...+..+..+++..++.++.||+|||+++
T Consensus 296 ~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~------------~~~~~~~v~~~~t~~~~~lvd~~gRr~ll 362 (513)
T KOG0254|consen 296 LIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FL------------ASIILGVVNFLGTLVATYLVDRFGRRKLL 362 (513)
T ss_pred HHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HH------------HHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 455666777777788889999999999998887553 11 45555666777777889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073 234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH 313 (402)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 313 (402)
+.+...+.+++++++............ .....+..+....+....+..+..++.|.+.+|.+|.+.|+.+.
T Consensus 363 l~s~~~m~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~ 433 (513)
T KOG0254|consen 363 LFGAAGMSICLVILAVVGVFALYYPNS---------SKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGA 433 (513)
T ss_pred HHhHHHHHHHHHHHHHHHHHhccCCCc---------ccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhH
Confidence 999999999998888765433221000 00222334444445555667888899999999999999999999
Q ss_pred hHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhh-hee-eeeccCCccccccccch
Q 045073 314 GISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFL-CSF-MVPETNGLSLEELSGED 378 (402)
Q Consensus 314 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i-~~~-~~~et~~~~~~~~~~~~ 378 (402)
++....+++.+.+....+....... +....|..++..+.+... +.+ ++||||+++++|+++..
T Consensus 434 s~~~~~n~~~~~~v~~~~~~~~~~~--~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~ 498 (513)
T KOG0254|consen 434 SLAVAVNWLWNFLISFFFPFITEAL--GIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELF 498 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc--cccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHH
Confidence 9999999999887777777766653 334566666666666555 444 56999999999887653
No 9
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.95 E-value=1.6e-31 Score=251.88 Aligned_cols=324 Identities=27% Similarity=0.400 Sum_probs=218.2
Q ss_pred CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073 2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV 81 (402)
Q Consensus 2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i 81 (402)
++.++.|+.|+.|+++||+..++.+.++.+|.+++..++..+.. ..+..+||+.++++++
T Consensus 120 ~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~--------------------~~~~~~Wr~~~~~~~~ 179 (451)
T PF00083_consen 120 YVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSY--------------------YSDNWGWRILLIFGAI 179 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccc--------------------cccccccccccccccc
Confidence 56788999999999999999999999999999999888766531 1124679999999999
Q ss_pred HHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccc-cccCCC-CCC---CCCccccccchhhhhhhhhHHHH
Q 045073 82 PAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTV-ATSAYP-VPV---SPEASTYGLFSKEFVQKHGLHLL 156 (402)
Q Consensus 82 ~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~ 156 (402)
++++.++...++||||||+.. +++.+|+.+.+++..+.+..+ +.++.. +.+ +.+....++++++..++ +...
T Consensus 180 ~~l~~~~~~~~~pESP~wL~~-~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~ 256 (451)
T PF00083_consen 180 PSLLVLLLRFFLPESPRWLLS-KGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRK--RLLI 256 (451)
T ss_pred ccccccccccccccccceecc-cccccccccccccccccccccccccccccccccccccceeeeeccccccccc--cccc
Confidence 998888888899999999854 455556666666644332211 111111 111 11112233333322111 1233
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHH
Q 045073 157 GTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGG 236 (402)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~ 236 (402)
...+..+....+.+....+.+.++++.|.++.. . ......+..+++.+++.+++||+|||++++.+
T Consensus 257 ~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~~--~------------~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~ 322 (451)
T PF00083_consen 257 ALLLQFFQQFSGINFIFYYSPSIFENAGISNSF--L------------ATLILGLVNFLGTLLAIFLIDRFGRRKLLIIG 322 (451)
T ss_pred ccccccccccccccccccccccccccccccccc--c------------cccccccccccccccccccccccccccccccc
Confidence 333333333445556667778888887776651 1 34455566777777888999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHH
Q 045073 237 FLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGIS 316 (402)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~ 316 (402)
..+++++.+.++.........+ + ......+....+.......++.+..+.+++|++|++.|+++.++.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~-~-----------~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~ 390 (451)
T PF00083_consen 323 LLLMAICSLILGIIFFLGVSSS-S-----------WWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLS 390 (451)
T ss_pred cccccccccccccccccccccc-c-----------ccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 8887777766651111111110 0 011222233333333445577788889999999999999999999
Q ss_pred HHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccCCcccccccc
Q 045073 317 AAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETNGLSLEELSG 376 (402)
Q Consensus 317 ~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~~~~~~~~~~ 376 (402)
...+++++++++.+.+.+.+.. +....+.++++++++..++.+ ++|||++++++|+++
T Consensus 391 ~~~~~i~~~i~~~~~~~~~~~~--~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~ 449 (451)
T PF00083_consen 391 YAVGRIGGFIIPFLFPYLFNNL--GGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQE 449 (451)
T ss_pred cccccccccccccccccccccc--cccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHh
Confidence 9999999999999988888765 435667777777777666655 569999999998765
No 10
>TIGR00898 2A0119 cation transport protein.
Probab=99.94 E-value=7.6e-26 Score=216.30 Aligned_cols=298 Identities=18% Similarity=0.287 Sum_probs=196.7
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
+...+++.|++|+++|+++.++.+.+..+|.++++.+++.+. +||+.+++.+++
T Consensus 199 ~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~--------------------------~wr~~~~~~~i~ 252 (505)
T TIGR00898 199 VQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP--------------------------DWRWLQLAVSLP 252 (505)
T ss_pred HHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh--------------------------HHHHHHHHHHHH
Confidence 556789999999999999999999999999999999887663 399999998888
Q ss_pred HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhcccccccccc---CC--CCC---CCCCccccccchhhhhhhhhHH
Q 045073 83 AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATS---AY--PVP---VSPEASTYGLFSKEFVQKHGLH 154 (402)
Q Consensus 83 ~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~---~~~~~~~~~~~~~~~~~~~~~~ 154 (402)
.++..+..+++||||+|+.. +++.+++.+.+++..+.+.....+ +. ++. ..++....++++.+..+ +.
T Consensus 253 ~~~~~~~~~~~~esp~~l~~-~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~ 328 (505)
T TIGR00898 253 TFLFFLLSWFVPESPRWLIS-QGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLR---KT 328 (505)
T ss_pred HHHHHHHHHhcCCChHHHHH-CCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHH---HH
Confidence 88877777889999999754 444455555554433322111000 00 000 00011222233322222 23
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHH
Q 045073 155 LLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQL 234 (402)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~ 234 (402)
.+.....++.....+|+...+.+. .+.+... ......+..+++.++.+++.||+|||+.+.
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---------------~~~~~~~~~i~~~~~~~~l~dr~grr~~~~ 389 (505)
T TIGR00898 329 TLCLMMLWFTTAFSYYGLVLDLGN----LGGNIYL---------------DLFISGLVELPAKLITLLLIDRLGRRYTMA 389 (505)
T ss_pred HHHHHHHHHHHHHHHHHHhccccc----cCCChHH---------------HHHHHHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 444444555555555555444443 3333211 334456677788889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhh
Q 045073 235 GGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHG 314 (402)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~ 314 (402)
++.++.+++++++..... ...+....+. +...++..+..+..+.+.+|.+|++.|+++.|
T Consensus 390 ~~~~~~~~~~l~~~~~~~-------------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g 449 (505)
T TIGR00898 390 ASLLLAGVALLLLLFVPV-------------------DLYFLRTALA-VLGKFGITSAFQMVYLYTAELYPTVVRNLGVG 449 (505)
T ss_pred HHHHHHHHHHHHHHHcCC-------------------CchHHHHHHH-HHHHHHHHHHHHHHHHHhcccccHHHHhhhHh
Confidence 888877777665554310 1112222222 22222223334567788999999999999999
Q ss_pred HHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccCCccccc
Q 045073 315 ISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETNGLSLEE 373 (402)
Q Consensus 315 ~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~~~~~~~ 373 (402)
+.+..+++|++++|.+.+ +.+. +...++.+++++.+++.++.+++|||++++++|
T Consensus 450 ~~~~~~~ig~~i~p~i~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~lpet~~~~l~~ 504 (505)
T TIGR00898 450 VCSTMARVGSIISPFLVY-LGEK---WLFLPLVLFGGLALLAGILTLFLPETKGVPLPE 504 (505)
T ss_pred HHHHHHHHHHHHHhHHHH-HHHH---HHhhHHHHHHHHHHHHHHHHHcCcCCCCCCCCC
Confidence 999999999999999888 4332 566788888888888887777889999887654
No 11
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.94 E-value=3.9e-25 Score=210.03 Aligned_cols=320 Identities=23% Similarity=0.314 Sum_probs=207.0
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHH---HHHHhhhhccccCcccccccccccCCCCCchhHHHHHHh
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVIS---LIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFG 79 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~ 79 (402)
+...+++.|++|+++|++++++.+.+..+|.++++.++ ... ....+||+.|++.
T Consensus 146 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~-----------------------~~~~~w~~~f~~~ 202 (481)
T TIGR00879 146 ALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSL-----------------------NNTLGWRIPLGLQ 202 (481)
T ss_pred hHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcC-----------------------CCCccHHHHHHHH
Confidence 45678999999999999999999999999999999988 322 1557899999998
Q ss_pred HHHHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccc--c--------CCCCCCCCCccccccchhhhhh
Q 045073 80 AVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVAT--S--------AYPVPVSPEASTYGLFSKEFVQ 149 (402)
Q Consensus 80 ~i~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~~~~~~~~~~~~~~~~~~~ 149 (402)
++..++.++..+++||+|+++.. +++.+++.+...+..+.+..+.. + ...+.+..+.. +..+.....+
T Consensus 203 ~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 280 (481)
T TIGR00879 203 LIPAGLLFLGLFFLPESPRWLVG-KGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPS-WGSLFSSTRR 280 (481)
T ss_pred HHHHHHHHHHHhcCCCChHHHHH-cCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhcccc-HHHHHhcCch
Confidence 77777777777889999987543 22222222222221111100000 0 00000000000 1111111000
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccch
Q 045073 150 KHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGR 229 (402)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~gr 229 (402)
..++.++...+..+......+....+.|.+.++.|++....+. ......++.+++.++.++++||+||
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------------~~~~~~~~~~~~~~~~g~l~d~~~~ 348 (481)
T TIGR00879 281 IRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFL------------VSIIVGAVNFAFTFVAIFLVDRFGR 348 (481)
T ss_pred hHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHH------------HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 0122334444444444444555667788888888888754433 6667777888899999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchh
Q 045073 230 FIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLR 309 (402)
Q Consensus 230 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 309 (402)
|+.+..+..+.+++.+++.......... .+ + ......+....+...+...+..+....+..|.+|++.|
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 417 (481)
T TIGR00879 349 RPLLLIGAAGMAICLFVLGILGASFVTG-SS-K---------SSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLR 417 (481)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcccCC-cc-c---------chhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHH
Confidence 9999888777777666665332211110 00 0 01222333333333444455566777888999999999
Q ss_pred hhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheee-eeccCCcccc
Q 045073 310 STCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM-VPETNGLSLE 372 (402)
Q Consensus 310 ~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~et~~~~~~ 372 (402)
+++.++.+...++++++++.+.+.+.+.. ++...|++.+++++++.++.++ .||+++++.+
T Consensus 418 ~~~~~~~~~~~~lg~~i~~~~~~~~~~~~--~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~ 479 (481)
T TIGR00879 418 PKGISIAVAANWLANFIVGFLFPTMLESI--GVGGVFIFFGGLNVLGLIFVYFFLPETKGRTLE 479 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CccceehhHHHHHHHHHHHHheecccCCCCChh
Confidence 99999999999999999999999988876 7888888888888887777654 4888766543
No 12
>PRK09952 shikimate transporter; Provisional
Probab=99.93 E-value=2.3e-24 Score=201.69 Aligned_cols=293 Identities=15% Similarity=0.155 Sum_probs=184.6
Q ss_pred CCCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhH
Q 045073 1 DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGA 80 (402)
Q Consensus 1 ~~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~ 80 (402)
++|.+..++.|++|+++|++..+..+.+..+|.+++..+...+.....+. ....+|||++|++++
T Consensus 142 ~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~---------------~~~~~gWr~~f~~~~ 206 (438)
T PRK09952 142 EWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDE---------------QFLSWGWRIPFLFSI 206 (438)
T ss_pred cHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH---------------HhhccChHHHHHHHH
Confidence 45677889999999999999999999999999999988777665322110 113579999999988
Q ss_pred HHHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073 81 VPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS 160 (402)
Q Consensus 81 i~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (402)
++.++.+..+..+||+|+|...+++ +++. +++... .+..+ ++++.......
T Consensus 207 ~~~l~~~~l~~~~~es~~~~~~~~~-~~~~-----------------------~~~~~~----~~~l~-~~~~~~~~~~~ 257 (438)
T PRK09952 207 VLVLIALWVRNGMEESAEFEQQQHE-QAAA-----------------------KKRIPV----IEALL-RHPGAFLKIIA 257 (438)
T ss_pred HHHHHHHHHHHhCCCChhHHHHHhh-cccc-----------------------cccCCH----HHHHH-HchHHHHHHHH
Confidence 8877766666778999987422111 0000 000000 11111 12222333333
Q ss_pred HHHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073 161 TWFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL 239 (402)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~ 239 (402)
..+......|....+.|.+.+ ..|.+...... ......+..+++.++.|+++||+|||+.+..+.++
T Consensus 258 ~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~------------~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~ 325 (438)
T PRK09952 258 LRLCELLTMYIVTAFALNYSTQNLGLPRELFLN------------IGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALI 325 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence 344445567777778888774 46766543211 33344556677778899999999999988877655
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073 240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA 319 (402)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 319 (402)
..++.+.+..... . .+....+....+..++......+..+++.+|.+|++.|+++.++.+..
T Consensus 326 ~~~~~~~~~~~~~--~----------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~ 387 (438)
T PRK09952 326 GTLSAFPFFMALE--A----------------QSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQV 387 (438)
T ss_pred HHHHHHHHHHHHH--c----------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHH
Confidence 4443332222111 0 111122222222222222233445678889999999999999997766
Q ss_pred HH-HhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccC
Q 045073 320 GK-AGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETN 367 (402)
Q Consensus 320 ~~-~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~ 367 (402)
+. +++.++|.+.+.+.+..+.+|...+...+++.+++.+..+.++|++
T Consensus 388 ~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~ 436 (438)
T PRK09952 388 ASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKDNQ 436 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccccc
Confidence 55 7889999999999875432577777777777787777766666643
No 13
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.91 E-value=1.1e-22 Score=190.26 Aligned_cols=287 Identities=20% Similarity=0.195 Sum_probs=171.5
Q ss_pred CCCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhH
Q 045073 1 DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGA 80 (402)
Q Consensus 1 ~~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~ 80 (402)
|+|.+.++++|++|+++||++.++.+.+...|.++++.+...+.....+. ....+|||++|++++
T Consensus 141 ~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~---------------~~~~~gWr~~F~i~~ 205 (432)
T PRK10406 141 EYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDA---------------ELREWGWRIPFALGA 205 (432)
T ss_pred hHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH---------------HHhccchHHHHHHHH
Confidence 46788999999999999999999999998899988888766654322110 013579999999988
Q ss_pred HHHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073 81 VPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS 160 (402)
Q Consensus 81 i~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (402)
+++++.++.+..+||+|++.. ++ .+ + ..+. + ...++ ++.......
T Consensus 206 ~~~ll~~~~~~~~~e~~~~~~--~~--~~------------------------~-~~~~----~-~l~~~-~~~~~~~~~ 250 (432)
T PRK10406 206 VLAVVALWLRRQLDETSQQET--RA--LK------------------------E-AGSL----K-GLWRN-RRAFIMVLG 250 (432)
T ss_pred HHHHHHHHHHhcCCCCchHHH--hh--hc------------------------c-cccH----H-HHHhh-HHHHHHHHH
Confidence 888887777777899876511 00 00 0 0011 1 11111 112222222
Q ss_pred HHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073 161 TWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL 239 (402)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~ 239 (402)
..+.....+|....|.|.++++ .|++..+.+. ......+...++..+.|+++||++||+.+..+..+
T Consensus 251 ~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~------------~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~ 318 (432)
T PRK10406 251 FTAAGSLCFYTFTTYMQKYLVNTAGMHANVASG------------IMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSL 318 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHH
Confidence 2333355677788899998854 6877665433 44445555667777889999999999887766554
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073 240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA 319 (402)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 319 (402)
.++..+.+..... .. ......+.+..+...... ...+..+.+.+|.+|++.|+++.|+.+..
T Consensus 319 ~~~~~~~~~~~~~---~~--------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~fp~~~r~t~~g~~~~~ 380 (432)
T PRK10406 319 AALFTVPILSALQ---NV--------------SSPYAAFGLVMCALLIVS-FYTSISGILKAEMFPAQVRALGVGLSYAV 380 (432)
T ss_pred HHHHHHHHHHHHH---cC--------------CcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCCccchhhhHHHHH
Confidence 3333221111111 00 111111111111111111 11234567789999999999999999988
Q ss_pred HHH-hHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccCCcc
Q 045073 320 GKA-GAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETNGLS 370 (402)
Q Consensus 320 ~~~-g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~~~~ 370 (402)
+++ .+...|.+.+.+ +..+ .+...++..++..+++.+..+++ ++++|+
T Consensus 381 g~~~~g~~~p~~~~~l-~~~g-~~~~~~~~~~~~~~i~~~~~~~l-~~~~~~ 429 (432)
T PRK10406 381 ANALFGGSAEYVALSL-KSIG-METAFFWYVTLMAVVAFLVSLML-HRKGKG 429 (432)
T ss_pred HHHHHHhHHHHHHHHH-HHhC-CCcHHHHHHHHHHHHHHHHHHHh-hhcccc
Confidence 775 344577777755 4332 34455666666666666555544 334443
No 14
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.91 E-value=5e-24 Score=186.17 Aligned_cols=291 Identities=16% Similarity=0.204 Sum_probs=205.5
Q ss_pred CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHH--HHHHhhhhccccCcccccccccccCCCCCchhHHHHHHh
Q 045073 2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVIS--LIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFG 79 (402)
Q Consensus 2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~ 79 (402)
+|.+...++.|+|+++||+..++++.+.++|..+.+++. +.+. .+.+||..|++.
T Consensus 135 wpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~-----------------------~~~~w~~~f~~p 191 (448)
T COG2271 135 WPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFA-----------------------FHGGWRAAFYFP 191 (448)
T ss_pred CcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHH-----------------------hccchhHHHHHH
Confidence 688889999999999999999999999999999999988 5554 556899999997
Q ss_pred HHHHHH-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCC-ccccccchhhhhhhhhHHHHH
Q 045073 80 AVPAAL-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPE-ASTYGLFSKEFVQKHGLHLLG 157 (402)
Q Consensus 80 ~i~~~~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 157 (402)
++.+++ .++.++.++|+|+-.-+ ..-++. .++..+.+ ++.++++ -+.++.+.+-.+++ +.++.
T Consensus 192 giiaiival~~~~~~rd~Pqs~GL--P~ie~~-------~~d~~e~~----~~~~~~~~ls~~~i~~~YVL~N--k~iW~ 256 (448)
T COG2271 192 GIIAIIVALILLFLLRDRPQSEGL--PPIEEY-------RGDPLEIY----EEEKENEGLTAWQIFVKYVLKN--KLIWL 256 (448)
T ss_pred HHHHHHHHHHHHHHhCCCccccCC--CCHHHh-------hcCchhhh----hhhccCCCccHHHHHHHHHHcC--hHHHH
Confidence 777665 56666678999864221 111111 11111100 1111111 34455555555554 47888
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhcc--chhHHHH
Q 045073 158 TTSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRI--GRFIIQL 234 (402)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~--grr~~~~ 234 (402)
+++........-|++.-|.|.|+.+ .|++..+++. .....-.++++|++++|+++||+ |||....
T Consensus 257 la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~------------a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~ 324 (448)
T COG2271 257 LALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANW------------AISLFEVAGLPGTLLAGWLSDKLFKGRRGPMA 324 (448)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHH------------HHHHHHHHhhHHHHHHHHHHHHhcccccchHH
Confidence 8888888899999999999999865 7888776655 77788899999999999999997 5665544
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhh
Q 045073 235 GGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHG 314 (402)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~ 314 (402)
+.+.+.....++.. +..+ ..+..+..++....++...++.-..-..+.|..|++..|++.|
T Consensus 325 ~i~~~~i~~~~~~~-----w~~~--------------~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~G 385 (448)
T COG2271 325 LIFMLLITASLVLY-----WLAP--------------NGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATG 385 (448)
T ss_pred HHHHHHHHHHHHHH-----HcCC--------------CccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhc
Confidence 33222221111111 1111 2333444444444555556666566667899999999999999
Q ss_pred HHHHHHHH-hHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073 315 ISAAAGKA-GAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 315 ~~~~~~~~-g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 363 (402)
+...++.+ |...+....+++.|.+ +|...|.++.+.++++.++....
T Consensus 386 f~Glf~Yl~Ga~~a~~~~g~i~d~~--gW~g~Fi~~~~~a~l~~lll~~~ 433 (448)
T COG2271 386 FVGLFAYLIGAALAGLPLGYIADTW--GWDGGFIVLSIAALLAILLLLPV 433 (448)
T ss_pred hhhhHHHHhhHHhcCCcceeeEecC--CCcchHHHHHHHHHHHHHHHHHH
Confidence 99999999 8888889999998886 89999988888887777665543
No 15
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.91 E-value=2.8e-22 Score=182.47 Aligned_cols=262 Identities=13% Similarity=0.066 Sum_probs=169.5
Q ss_pred chhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHH
Q 045073 5 SAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAA 84 (402)
Q Consensus 5 ~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~ 84 (402)
....++|++|+++|++++++.+.+..+|.++++.++..+. +..|||+.|++.+++++
T Consensus 99 ~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~-----------------------~~~gWr~~f~~~~~l~~ 155 (368)
T TIGR00903 99 AFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIY-----------------------TAGGLQLLIIPIAAVAA 155 (368)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------HccchHHHHHHHHHHHH
Confidence 3456799999999999999999999999999999999887 56899999999555554
Q ss_pred H-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHH
Q 045073 85 L-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWF 163 (402)
Q Consensus 85 ~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (402)
+ .++.++++||+|++. ++.. +..+.. +. .++..++ +.++......+
T Consensus 156 ~~~~~~~~~lp~~p~~~---~~~~-~~~~~~----------------------~~-----~~~ll~~--~~~~~~~~~~~ 202 (368)
T TIGR00903 156 AGIILVLAALPALPFQA---AEGF-GFKDAV----------------------KE-----FGALAGR--KDLWIIGAILG 202 (368)
T ss_pred HHHHHHHHHcCCCCCCC---CCCc-chHHHH----------------------HH-----HHHHHcC--hhHHHHHHHHH
Confidence 4 555666799998762 1110 000000 00 1112222 24566666677
Q ss_pred HHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchh---HHHHH-HHHH
Q 045073 164 LLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRF---IIQLG-GFLL 239 (402)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr---~~~~~-~~~~ 239 (402)
+....+++...|+|.++++.|++.. .+. ......+... +..++++||..|| +.... ...+
T Consensus 203 ~~~~~~~~~~~wlp~~L~~~g~s~~-~~~------------~~~l~~~~g~---~g~~~~~d~~~r~~~r~~~~~~~~~~ 266 (368)
T TIGR00903 203 FGVALFDNLAIWLEAALRPAGLEDI-AGD------------AVALAILAGL---IGVAVIPDRVARAGLRSIYIRAAALL 266 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCChH-HHH------------HHHHHHHHHH---HHHHHhhHHhhhhhhHHHHHHHHHHH
Confidence 7778888999999999988777643 222 2233333333 3457888887543 33222 2222
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073 240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA 319 (402)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 319 (402)
.++....+... .+....+ .+....+++..+..+..+++.+|.+|++.|+++.|+.+..
T Consensus 267 ~a~~~~~~~~~---------------------~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~ 324 (368)
T TIGR00903 267 IAAFFLALAFE---------------------LNRLALF-AFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFT 324 (368)
T ss_pred HHHHHHHHHHc---------------------cccHHHH-HHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHH
Confidence 22222222211 1111222 2222222333344455778899999999999999999999
Q ss_pred HHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeee
Q 045073 320 GKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVP 364 (402)
Q Consensus 320 ~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~ 364 (402)
++++++++|.+.+.+.. +....|.++++..+++.+..++++
T Consensus 325 g~~~~~~~~~~~~~~~~----~~~~~f~~~~~~~~i~~~~~~~~~ 365 (368)
T TIGR00903 325 SRAISVALALAAMLFIS----SAEAYFTFLAILITIAFAIALLLP 365 (368)
T ss_pred HHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999988887773 667778888888887777665434
No 16
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.90 E-value=2.9e-22 Score=186.39 Aligned_cols=273 Identities=20% Similarity=0.256 Sum_probs=180.5
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
+...+++.|++|+++|++++++.+.+..+|..+++.++..+. +..+||+.|++.++.
T Consensus 122 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~ 178 (406)
T PRK11551 122 PNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAA-----------------------GDAAWRHIFYVGGVG 178 (406)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------------------cccCHHHHHHHHHHH
Confidence 345678999999999999999999999999999999887765 567899999986655
Q ss_pred HHH-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073 83 AAL-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST 161 (402)
Q Consensus 83 ~~~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (402)
.++ .++...++||+|++.. ++.+++..+.. ....++.... +........
T Consensus 179 ~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~------------------------~~~~~~~~~~----~~~~~~~~~ 228 (406)
T PRK11551 179 PLLLVPLLMRWLPESRAFAQ--AAGAGKQRAPV------------------------LRALFGEGRA----TATLLLWIS 228 (406)
T ss_pred HHHHHHHHHHhCCCChhHHh--ccCcchhhhhh------------------------HHHHhhhhhh----hHHHHHHHH
Confidence 444 3444556899887531 11111000000 0000011100 112222233
Q ss_pred HHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHH
Q 045073 162 WFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMS 241 (402)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~ 241 (402)
.+......+....+.|.+.++.|++..+.+. ......++.+++.++.|++.||+|||+.+..+.....
T Consensus 229 ~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~ 296 (406)
T PRK11551 229 YFFTLIVLYFLLNWLPSLLVGQGLSRSQAGL------------VQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGIL 296 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChhhhhH------------HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3333445566677889998888888776554 6667778889999999999999999998877655554
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHH
Q 045073 242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGK 321 (402)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 321 (402)
++...+... .+. ....+..+..++...+..+..+++..|.+|++.|+++.|+.+....
T Consensus 297 ~~~~~~~~~---------------------~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 354 (406)
T PRK11551 297 ASLAALAAA---------------------PSF-AGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGR 354 (406)
T ss_pred HHHHHHHhc---------------------CcH-HHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhh
Confidence 444333221 111 2222222233333334455677888999999999999999999999
Q ss_pred HhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073 322 AGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 322 ~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 363 (402)
+|..++|.+.+.+.+..+ ++...++....+.+++.++.+++
T Consensus 355 ~g~~~g~~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 355 LGSMAGPLLAGQLLALGR-STVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHHHhhhHhhhhccCC-chHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988643 45556666666666655555544
No 17
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.90 E-value=3.5e-22 Score=186.94 Aligned_cols=289 Identities=12% Similarity=0.091 Sum_probs=177.6
Q ss_pred CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073 2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV 81 (402)
Q Consensus 2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i 81 (402)
++...+++.|++|+++|++++++.+.+..+|.++++.+++.+. +..+||+.|++.++
T Consensus 129 ~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~-----------------------~~~gw~~~f~~~~i 185 (434)
T PRK11663 129 WPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIA-----------------------LHYGWRYGMMIAGI 185 (434)
T ss_pred chHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------HcccHHHHHHHHHH
Confidence 4566788999999999999999999999999999999988886 56789999998776
Q ss_pred HHHH-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073 82 PAAL-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS 160 (402)
Q Consensus 82 ~~~~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (402)
++++ .++..+++||+|++......++.+. +.. +..++.++.+.+..+.++....++ +.++...+
T Consensus 186 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~----------~~~---~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 250 (434)
T PRK11663 186 IAIVVGLFLCWRLRDKPQAMGLPSVGEWRH----------DAL---ELAQQQEGAGLSRKEILTKYVLLN--PYIWLLSF 250 (434)
T ss_pred HHHHHHHHHHHHcCCCHhhcCCCCcccccc----------ccc---ccchhccccCCChhhhHHHHHhcC--hHHHHHHH
Confidence 6554 4445556899886521100000000 000 000000000011111111111121 23444444
Q ss_pred HHHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhcc--chh-HHHHHH
Q 045073 161 TWFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRI--GRF-IIQLGG 236 (402)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~--grr-~~~~~~ 236 (402)
..+......+....|.|.+++ +.|++..+.+. ......++.+++.++.|+++||+ ++| ......
T Consensus 251 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~------------~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~ 318 (434)
T PRK11663 251 SYVLVYVVRAAINDWGNLYMSETLGVDLVTANS------------AVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIF 318 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHH------------HHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHH
Confidence 444455566677778898884 57888776554 66677788899999999999998 333 322222
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHH
Q 045073 237 FLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGIS 316 (402)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~ 316 (402)
.....+....+.... . .+. ..........++...+..........|.+|++.|+++.|+.
T Consensus 319 ~~~~~~~~~~~~~~~----~---------------~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 378 (434)
T PRK11663 319 AAGILLSVGSLWLMP----F---------------ASY-VMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFV 378 (434)
T ss_pred HHHHHHHHHHHHHcc----c---------------ccH-HHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHH
Confidence 111111111111110 0 111 11111122222222222223344668999999999999999
Q ss_pred HHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheee
Q 045073 317 AAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM 362 (402)
Q Consensus 317 ~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~ 362 (402)
+...++|++++|.+.+.+.+.. ++...|.+.+++.+++.+..+.
T Consensus 379 ~~~~~~g~~~~p~~~g~l~~~~--g~~~~f~~~~~~~~~~~~~~~~ 422 (434)
T PRK11663 379 GLFAYLGAALSGYPLAKVLEIW--HWTGFFVVISIAAGISALLLLP 422 (434)
T ss_pred HHHHHHHHHHhcccHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987 8889999888888777665553
No 18
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.90 E-value=1.1e-21 Score=183.71 Aligned_cols=264 Identities=17% Similarity=0.131 Sum_probs=164.6
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
+....++.|++|+++|+++.++...+..+|.++++.+...+. +..+||+.|++..++
T Consensus 125 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~-----------------------~~~~w~~~f~i~~~~ 181 (426)
T PRK12307 125 ACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFA-----------------------EAYGWRAAFFVGLLP 181 (426)
T ss_pred HHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHc-----------------------ccCCHHHHHHHHHHH
Confidence 456788999999999999999999999999999998887765 557899999987665
Q ss_pred HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073 83 AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW 162 (402)
Q Consensus 83 ~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (402)
.++.+......||++++... +.+++ + +.++ ...+.....++....++..+.........
T Consensus 182 ~~~~~~~~~~~p~~~~~~~~--~~~~~-----------~---~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (426)
T PRK12307 182 VLLVIYIRARAPESKEWEEA--KLSGK-----------G---KHSQ-----SAWSVFSLSMKGLFNRAQFPLTLCVFIVL 240 (426)
T ss_pred HHHHHHHHHHCCCChHHHHh--hhhcc-----------c---cccc-----cchhhhhHHHHHHHhhchHHHHHHHHHHH
Confidence 55554444456777654211 00000 0 0000 00000000111111111111222222222
Q ss_pred HHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHH
Q 045073 163 FLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSI 242 (402)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~ 242 (402)
+......+....+.|.++++.|.+....+. ......++.+++.++.+++.||+|||+.+..+.++..+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------------~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~ 308 (426)
T PRK12307 241 FSIFGANWPIFGLLPTYLAGEGFDTGVVSN------------LMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFL 308 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 333334444566788888888887665443 55667788889999999999999999988877766555
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHH
Q 045073 243 CMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKA 322 (402)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 322 (402)
..+.+.... ...............+...+..+....++.|.+|++.|+++.|+.+....+
T Consensus 309 ~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~ 368 (426)
T PRK12307 309 FIFPLFRIP--------------------QDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAAT 368 (426)
T ss_pred HHHHHHHHc--------------------cccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhH
Confidence 443332210 111111111121112222233344556778999999999999999999999
Q ss_pred hHHHHhHhHHhhhhccCCcchh
Q 045073 323 GAIVGAFGVQYYTQKGDKQIKQ 344 (402)
Q Consensus 323 g~~i~~~~~~~~~~~~~~~~~~ 344 (402)
++.++|.+.+.+.+.. ++..
T Consensus 369 ~~~~gp~~~g~l~~~~--g~~~ 388 (426)
T PRK12307 369 SGTFNSMAATWLGITM--GLGA 388 (426)
T ss_pred HHHHHHHHHHHHHHcc--cHHH
Confidence 9999999999998876 5443
No 19
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.89 E-value=1.3e-21 Score=181.57 Aligned_cols=291 Identities=11% Similarity=0.119 Sum_probs=175.1
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
|....++.|++|+++|++++++++.+.++|.++++.+++.+..... ..+..|||+.|++.+++
T Consensus 115 ~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-----------------~~~~~gwr~~f~~~~~~ 177 (412)
T TIGR02332 115 PGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDG-----------------LMALKGWQWLFLLEGFP 177 (412)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----------------CCCccchhHHHHHHHHH
Confidence 5566789999999999999999999999999999999888751100 01346899999997777
Q ss_pred HHH-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCC-CCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073 83 AAL-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYP-VPVSPEASTYGLFSKEFVQKHGLHLLGTTS 160 (402)
Q Consensus 83 ~~~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (402)
+++ .++..+++||+|+.. +.-.+++.+...+..+.+.. +.++.+ ...+........+ +..++ +.++....
T Consensus 178 ~l~~~~~~~~~~~~~p~~~---~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~ 249 (412)
T TIGR02332 178 SVILGVMTWFWLDDSPDKA---KWLDEEDKKALKEMIDNDQL-TLEQPEGAFAHAAMPQRSML-REIFT---PAIMLYTL 249 (412)
T ss_pred HHHHHHHHhhccCCCcccC---CCCCHHHHHHHHHHHHhccc-cccccccccccccccHHHHH-HHhcC---hHHHHHHH
Confidence 665 445556789998531 00001111111111111100 000000 0000000000011 11111 23455556
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhc--CcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH-HHHH
Q 045073 161 TWFLLDIAFYTINLAQKDIYPAT--GIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ-LGGF 237 (402)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~-~~~~ 237 (402)
..++....++....|.|.++++. |.+..+.+. ......++.++|.++.|+++||++||+.. ....
T Consensus 250 ~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~------------~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~ 317 (412)
T TIGR02332 250 AYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGL------------LAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPY 317 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHH------------HhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHH
Confidence 66666677888889999999874 455554333 67777888999999999999999977643 3333
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHH
Q 045073 238 LLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISA 317 (402)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~ 317 (402)
.+.+++. ++... . ........... ....+.....+..+....|.+|++.|+++.|+.+
T Consensus 318 ~~~~~~~-~~~~~----~----------------~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~ 375 (412)
T TIGR02332 318 LFAAAGW-LLASA----T----------------DHNLIQLLGII-MASMGSFSAMAIFWTTPDQSISLQARAIAIAVIN 375 (412)
T ss_pred HHHHHHH-HHHHh----c----------------CCHHHHHHHHH-HHHHHhhhhhhHHHhhcccccchHHHHHHHHHHH
Confidence 3333322 11111 0 11111111111 1111122223344555678899999999999999
Q ss_pred HHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHH
Q 045073 318 AAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVN 353 (402)
Q Consensus 318 ~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (402)
..+++|++++|.+.+.+.+..+ +|...+++.+++.
T Consensus 376 ~~~~~g~~~~p~~~g~i~~~~g-~~~~~~~~~~~~~ 410 (412)
T TIGR02332 376 ATGNIGSALSPFLIGILKDATG-SFNSGLWFVAALL 410 (412)
T ss_pred HhhhhhhhhhhhhcccccccCC-CCchhHHHHHHHH
Confidence 9999999999999999998764 5777777766544
No 20
>PRK15075 citrate-proton symporter; Provisional
Probab=99.89 E-value=2.3e-21 Score=181.55 Aligned_cols=259 Identities=15% Similarity=0.153 Sum_probs=157.6
Q ss_pred CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073 2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV 81 (402)
Q Consensus 2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i 81 (402)
++....+++|++|+++|++++++...+..+|..+++.++..+.....+. ..+.+|||++|+++.+
T Consensus 135 ~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~---------------~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 135 LGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPA---------------QMAEWGWRIPFLIGCL 199 (434)
T ss_pred HHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH---------------HHhccchHHHHHHHHH
Confidence 4556789999999999999999999999999999888888775322110 0145789999998665
Q ss_pred HHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073 82 PAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST 161 (402)
Q Consensus 82 ~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (402)
..++.++.....||++++.. ++++ + +..+.++ .. +++++........
T Consensus 200 ~~~~~~~~~~~~~e~~~~~~--~~~~--------------------------~---~~~~~~~-~~-~~~~~~~~~~~~~ 246 (434)
T PRK15075 200 IVPFIFLIRRSLEETEEFLA--RKHR--------------------------P---SMREIFR-SL-AANWRIVLAGMLM 246 (434)
T ss_pred HHHHHHHHHHhcCCCHHHHH--hhhc--------------------------c---ccccHHH-HH-HHhHHHHHHHHHH
Confidence 54444444444566543310 0000 0 0001111 11 1111222222333
Q ss_pred HHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073 162 WFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240 (402)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~ 240 (402)
.+.....++....|.|.++++ .|++..+.+. ......++.+++.++.|+++||+|||+.+..+..+.
T Consensus 247 ~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~------------~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~ 314 (434)
T PRK15075 247 VAMTTVSFYLITVYTPTFGKTVLHLSAADSLL------------VTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLA 314 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 334455677788889999876 7888765443 566677778888999999999999999887765443
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG 320 (402)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~ 320 (402)
.+.......... . . ...........+. +.......+..+.+..|.+|++.|+++.++.+..+
T Consensus 315 ~~~~~~~~~~~~--~-~--------------~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~ 376 (434)
T PRK15075 315 ILTAYPALSWLV--A-A--------------PSFARMLAVELWL-SFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLA 376 (434)
T ss_pred HHHHHHHHHHHH--c-C--------------CchHHHHHHHHHH-HHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHH
Confidence 322111111110 0 1 1111111111111 11112223345567899999999999999976666
Q ss_pred HH-hHHHHhHhHHhhhhcc
Q 045073 321 KA-GAIVGAFGVQYYTQKG 338 (402)
Q Consensus 321 ~~-g~~i~~~~~~~~~~~~ 338 (402)
.. ++.++|.+.+.+.+..
T Consensus 377 ~~~~g~~~p~~~g~i~~~~ 395 (434)
T PRK15075 377 TAIFGGFTPAISTWLIHVT 395 (434)
T ss_pred HHHHhhhHHHHHHHHHHhc
Confidence 54 5788999999999877
No 21
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.88 E-value=2.5e-21 Score=180.59 Aligned_cols=282 Identities=9% Similarity=0.007 Sum_probs=183.5
Q ss_pred cchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHH
Q 045073 4 LSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPA 83 (402)
Q Consensus 4 ~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~ 83 (402)
...+++.|+.|+++|+++.++...+..+|..+++.+++.+. +..+||+.+++.++..
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~-----------------------~~~~~~~~~~~~~~~~ 186 (417)
T PRK10489 130 ALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLI-----------------------AAGGVAWNYGLAAAGT 186 (417)
T ss_pred HHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHH-----------------------HHHhhHHHHHHHHHHH
Confidence 34567889999999999999999999999999999999886 4467999999877777
Q ss_pred HHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHH
Q 045073 84 ALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWF 163 (402)
Q Consensus 84 ~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (402)
++..+..+.+||+++.. +++++..++.. +.++. .++++ .+.......+
T Consensus 187 ~~~~~~~~~l~~~~~~~----~~~~~~~~~~~-------------------------~~~~~-~~~~~--~~~~~~~~~~ 234 (417)
T PRK10489 187 FITLLPLLRLPALPPPP----QPREHPLRSLL-------------------------AGFRF-LLASP--VVGGIALLGG 234 (417)
T ss_pred HHHHHHHHhCCCCCCCC----cccccchHHHH-------------------------HHHHH-HHcCh--HHHHHHHHHH
Confidence 76666666788765321 10000000000 00011 11111 1111111111
Q ss_pred HHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHH
Q 045073 164 LLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSI 242 (402)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~ 242 (402)
... ...+...+.|.+.++ .|.++...+. ......++.+++.++.+++.||.++++.+..+..+.++
T Consensus 235 ~~~-~~~~~~~~~p~~~~~~~g~~~~~~g~------------~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~ 301 (417)
T PRK10489 235 LLT-MASAVRVLYPALADEVWQMGAAQIGL------------LYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFL 301 (417)
T ss_pred HHH-HHHhHHHhhHHHHHhccCCChhHhHH------------HHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHH
Confidence 111 123455677888877 7887765554 56667788889999999999998877777777665555
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHH
Q 045073 243 CMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKA 322 (402)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 322 (402)
+.+++... . ......+..+..+.+.....+...++..|..|++.|+++.|+.+....+
T Consensus 302 ~~~~~~~~---------------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~ 359 (417)
T PRK10489 302 AVGLFGLM---------------------P-MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVT 359 (417)
T ss_pred HHHHHHcc---------------------c-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhh
Confidence 54443321 1 1222222222222222222334567788999999999999999999999
Q ss_pred hHHHHhHhHHhhhhccCCcchhhHHHHHHHHHH-HhhheeeeeccCCccccccccc
Q 045073 323 GAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFL-GFLCSFMVPETNGLSLEELSGE 377 (402)
Q Consensus 323 g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~i~~~~~~et~~~~~~~~~~~ 377 (402)
|..+++.+.+.+.+.. +....+.+.+++.++ +.+....++++|+++.+|.+++
T Consensus 360 g~~~g~~l~G~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (417)
T PRK10489 360 GDAIGAALLGGLGAMM--TPVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEVD 413 (417)
T ss_pred hHhHHHHHHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHhcccccccccccccCC
Confidence 9999999999999987 677777766665554 4444455689888887776554
No 22
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.88 E-value=6.3e-21 Score=177.28 Aligned_cols=281 Identities=13% Similarity=0.100 Sum_probs=172.4
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
+...+++.|++|+++|+++.++.+.+..+|.++++.++..+... ...+||+.|++.+++
T Consensus 119 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~---------------------~~~~w~~~f~~~~~~ 177 (405)
T TIGR00891 119 GSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPV---------------------WGDGWRALFFISILP 177 (405)
T ss_pred HHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------------cCccHHHHHHHHHHH
Confidence 45678899999999999999999999999999999998887621 123599999988877
Q ss_pred HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073 83 AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW 162 (402)
Q Consensus 83 ~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (402)
.++.++....+||+|++... ++++++..+...+..+.+... . ...+......+.. .++.+..+.......
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 247 (405)
T TIGR00891 178 IIFALWLRKNIPEAEDWKEK-HAGKALVRTMVDILYGGEHRI-A-------NIVMTLAAAMVQS-AGKRWPTFVYLVVLV 247 (405)
T ss_pred HHHHHHHHHhCCCChhHHHH-hhhhhhhhhHHHHHhccchhh-h-------hhhhhhhHHhhhh-hhhhhHHHHHHHHHH
Confidence 77777777778998876321 111111111111111100000 0 0000000000111 111112222222223
Q ss_pred HHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHH
Q 045073 163 FLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMS 241 (402)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~ 241 (402)
............+.|.++. +.|++..+.+. ......++.+++.++.+++.||+|||+.+..+.....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~------------~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~ 315 (405)
T TIGR00891 248 LFANLYSHPIQDLLPTYLKADLGLSPHTVAN------------IVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQ 315 (405)
T ss_pred HHHHHHHhhhhhhhHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHH
Confidence 3333334455556677764 47888776554 5667778889999999999999999998887765443
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHH
Q 045073 242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGK 321 (402)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 321 (402)
+..+..... . .+. ....+.....++...+..+....+..|.+|++.|+++.|+.+....
T Consensus 316 ~~~~~~~~~----~----------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 374 (405)
T TIGR00891 316 LLIIPVFAI----G----------------ANV-AVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGN 374 (405)
T ss_pred HHHHHHHHh----C----------------Cch-HHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHH
Confidence 322221111 0 111 2222221222233334445666788999999999999999999999
Q ss_pred HhHHHHhHhHHhhhhccCCcchhhHHH
Q 045073 322 AGAIVGAFGVQYYTQKGDKQIKQSIIT 348 (402)
Q Consensus 322 ~g~~i~~~~~~~~~~~~~~~~~~~~~~ 348 (402)
++..++|.+.+.+.+..+ .+...+..
T Consensus 375 ~g~~~g~~~~g~l~~~~g-~~~~~~~~ 400 (405)
T TIGR00891 375 LGGALAPIIGALLAQRLD-EYGTALAS 400 (405)
T ss_pred HHHHHHHHHHHHHHHhcc-ccchhHHh
Confidence 999999999999999873 25554443
No 23
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.88 E-value=4.9e-21 Score=180.19 Aligned_cols=289 Identities=16% Similarity=0.135 Sum_probs=170.7
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHH-HHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGIL-FAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV 81 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i 81 (402)
|.....+.|++|+++|++++++++.+..+|.. .+++++..+. ...+||+.|++.++
T Consensus 139 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~-----------------------~~~gw~~~f~i~~~ 195 (452)
T PRK11273 139 PPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMA-----------------------WFNDWHAALYMPAF 195 (452)
T ss_pred hHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-----------------------HhccHHHHHHHHHH
Confidence 44567788999999999999999999998864 4555443332 22489999998666
Q ss_pred HHHH-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073 82 PAAL-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS 160 (402)
Q Consensus 82 ~~~~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (402)
+.++ .++..+++||+|+.... .++++. .+ +..++.++ .++++....+.+.+...++ +.++...+
T Consensus 196 ~~~~~~~l~~~~~~~~~~~~~~--~~~~~~----~~----~~~~~~~~---~~~~~~~~~~~~~~~~~~~--~~~~~~~l 260 (452)
T PRK11273 196 AAILVALFAFAMMRDTPQSCGL--PPIEEY----KN----DYPDDYNE---KHEQELTAKQIFMQYVLPN--KLLWYIAI 260 (452)
T ss_pred HHHHHHHHHHHHccCCHhhcCC--CChhhh----hh----cccccccc---ccCCCccHHHHHHHHHHcC--hHHHHHHH
Confidence 5555 45556678998764211 111110 00 00000000 0000111112222212222 24455555
Q ss_pred HHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhcc--chhHHHHH-H
Q 045073 161 TWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRI--GRFIIQLG-G 236 (402)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~--grr~~~~~-~ 236 (402)
..+......++...+.|.++++ .|++..+.+. ......++.+++.++.|+++||+ +||..... .
T Consensus 261 ~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~------------~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~ 328 (452)
T PRK11273 261 ANVFVYLLRYGILDWSPTYLKEVKHFALDKSSW------------AYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFF 328 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHH
Confidence 5555555667778899999976 6787665443 55566777888899999999999 55543222 2
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHH
Q 045073 237 FLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGIS 316 (402)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~ 316 (402)
..+..++.+.+... .. .+.....+ .....+....+.......+..|.+|++.|+++.|+.
T Consensus 329 ~~l~~~~~~~~~~~-----~~--------------~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~ 388 (452)
T PRK11273 329 MTLVTIATIVYWLN-----PA--------------GNPTVDMA-CMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFT 388 (452)
T ss_pred HHHHHHHHHHHHHh-----cc--------------cChHHHHH-HHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHH
Confidence 22222222211111 00 11111111 111112212222222334567999999999999999
Q ss_pred HHHHHHhHHH-HhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073 317 AAAGKAGAIV-GAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 317 ~~~~~~g~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 363 (402)
+....+|+.+ +|.+.+.+.+.. +++..|++.+++++++++....+
T Consensus 389 ~~~~~~g~~~~g~~v~g~l~~~~--g~~~~f~~~~~~~~~~~~~~~~~ 434 (452)
T PRK11273 389 GLFGYLGGSVAASAIVGYTVDFF--GWDGGFMVMIGGSILAVILLIVV 434 (452)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHh--cchHHHHHHHHHHHHHHHHHHHH
Confidence 9998888765 799999999988 88899988888888887776654
No 24
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.87 E-value=1.2e-21 Score=185.02 Aligned_cols=294 Identities=14% Similarity=0.109 Sum_probs=181.3
Q ss_pred CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073 2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV 81 (402)
Q Consensus 2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i 81 (402)
+|....+++|++|+++||+++++++.+.++|.++++.+...+.... ...+||..|.+.++
T Consensus 140 ~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~--------------------~~~~~~~~f~~~g~ 199 (467)
T PRK09556 140 GPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYF--------------------FDGHVIGMFIFPSI 199 (467)
T ss_pred chHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhh--------------------ccCcchhHHHHHHH
Confidence 4566789999999999999999999999999999998876654210 11259998888665
Q ss_pred HHHH-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073 82 PAAL-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS 160 (402)
Q Consensus 82 ~~~~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (402)
++++ .++..++.+|+|+... ..+.++ .. ++...++.++ .++++....+.+.+...++ +.++...+
T Consensus 200 ~~~~~~i~~~~~~~~~p~~~~--~~~~~~---~~----~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~--~~~~~~~~ 265 (467)
T PRK09556 200 IALIIGFIGLRYGSDSPEELG--WGKAEE---IF----GEPISEEDKE---TESTDMTKWQIFVEYVLKN--PVIWLLCF 265 (467)
T ss_pred HHHHHHHHHHHhCCCChhhcC--CCChhh---cc----cCccchhhhc---cccccCcHHHHHHHHHHcC--hHHHHHHH
Confidence 5554 4444555677764310 011111 00 0000000000 0000001111111112222 24555666
Q ss_pred HHHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073 161 TWFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL 239 (402)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~ 239 (402)
..++....+++...|.|.+++ .+|++..+.+. ......++.+++.+++|+++||+|||+.+.....+
T Consensus 266 ~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~------------~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~ 333 (467)
T PRK09556 266 ANIFLYIVRIGIDNWSPVYAFQELGFSKEDAIN------------TFTLFEIGALVGSLLWGWLSDLANGRRALVACIAL 333 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHH
Confidence 666666677788889998885 48888876554 56667778899999999999999998876654433
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073 240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA 319 (402)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 319 (402)
..++..++.... ........+..+..+....+..........|.+|++.|+++.|+.+..
T Consensus 334 ~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~ 393 (467)
T PRK09556 334 ALIIFTLGVYQH--------------------ATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTF 393 (467)
T ss_pred HHHHHHHHHHHh--------------------cCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHH
Confidence 333222222110 111122222222222222232222235567999999999999999999
Q ss_pred HHH-hHHHHhHhHHhhhh------------ccCCcchhhHHHHHHHHHHHhhheeee
Q 045073 320 GKA-GAIVGAFGVQYYTQ------------KGDKQIKQSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 320 ~~~-g~~i~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~i~~i~~~~~ 363 (402)
+++ |.+++|.+.|.+.+ .. +|...|.+.+++.+++.+..+++
T Consensus 394 g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~--~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 394 AYLFGDSFAKVGLGMIADPTKNGTPIFGYTLT--GWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred HHHHhHHHHhhhHHHHhccccccccccccccc--ChHHHHHHHHHHHHHHHHHHHHH
Confidence 997 77899999999998 33 78899988888888877666644
No 25
>TIGR00895 2A0115 benzoate transport.
Probab=99.87 E-value=9.7e-21 Score=175.54 Aligned_cols=274 Identities=21% Similarity=0.276 Sum_probs=169.4
Q ss_pred CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073 2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV 81 (402)
Q Consensus 2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i 81 (402)
++...+++.|++|+++|++++++...+..+|..+++.+++.+. +..+||+.+++.++
T Consensus 123 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~-----------------------~~~g~~~~~~~~~~ 179 (398)
T TIGR00895 123 MPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLI-----------------------PVFGWRSLFYVGGI 179 (398)
T ss_pred hhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHh-----------------------hcccceeehhhhhh
Confidence 3566789999999999999999999999999999999998876 56789999998754
Q ss_pred -HHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073 82 -PAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS 160 (402)
Q Consensus 82 -~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (402)
..+..++...++||+|++... +++++..+...+......+++.++..+.+.+++...+..+....++..+..+....
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (398)
T TIGR00895 180 APLLLLLLLMRFLPESIDFLVS--KRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWL 257 (398)
T ss_pred HHHHHHHHHHHhCCCCChHHHh--cCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHH
Confidence 444455556678999877432 22222222222221111111111111100100111111111111122223333444
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073 161 TWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240 (402)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~ 240 (402)
..+......+....+.|.+.++.|.+....+. ......++.+++.++.++++||+|||+..... .+.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~ 324 (398)
T TIGR00895 258 LYFMLLVGVYFLTNWLPKLMVELGFSLSLAAT------------GGALFNFGGVIGSIIFGWLADRLGPRVTALLL-LLG 324 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH-HHH
Confidence 44455556667777888777888888776544 66677788899999999999999999544433 333
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG 320 (402)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~ 320 (402)
++...++.... .+...... ..+..+.......+..+++..|.+|++.|+++.|+.+...
T Consensus 325 ~~~~~~~~~~~--------------------~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 383 (398)
T TIGR00895 325 AVFAVLVGSTL--------------------FSPTLLLL-LGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIG 383 (398)
T ss_pred HHHHHHHHHHh--------------------hCHHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Confidence 33322222211 11222222 2222233233344567788999999999999999999999
Q ss_pred HHhHHHHhHhHHhh
Q 045073 321 KAGAIVGAFGVQYY 334 (402)
Q Consensus 321 ~~g~~i~~~~~~~~ 334 (402)
.+|..++|.+.+.+
T Consensus 384 ~~g~~~g~~~~G~l 397 (398)
T TIGR00895 384 RLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHhHHhc
Confidence 99999999988865
No 26
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.87 E-value=8.3e-21 Score=181.28 Aligned_cols=292 Identities=14% Similarity=0.117 Sum_probs=171.1
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
+....++.|++|+++|+++.++...+..+|..+++.+++.+. +..+||+.|++.+++
T Consensus 127 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~-----------------------~~~~w~~~f~~~~~~ 183 (496)
T PRK03893 127 GSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVV-----------------------PVWGWRALFFIGILP 183 (496)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------------------ccCCHHHHHHHHHHH
Confidence 345678999999999999999999999999999999998876 567999999987766
Q ss_pred HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCC----------CCCCCCCccccc-----------
Q 045073 83 AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAY----------PVPVSPEASTYG----------- 141 (402)
Q Consensus 83 ~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~----------- 141 (402)
.++.++....+||++++...+ +++++ .++..+....+........ ..........+.
T Consensus 184 ~~~~~~~~~~~p~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (496)
T PRK03893 184 IIFALWLRKNLPEAEDWKEKH-AGKAP-VRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAI 261 (496)
T ss_pred HHHHHHHHHhCCCchhhhhhc-ccccc-chhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHH
Confidence 666666666788887653211 11110 0000000000000000000 000000000000
Q ss_pred --cchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhh
Q 045073 142 --LFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYW 218 (402)
Q Consensus 142 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 218 (402)
.+......+.+..........+......+....+.|.+++ +.|++..+.+. ......++.+++.+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~------------~~~~~~~~~~~g~~ 329 (496)
T PRK03893 262 FISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVAN------------VLFFSGFGAAVGCC 329 (496)
T ss_pred HHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHH------------HHHHHHHHHHHHHH
Confidence 0000000000001111111111111112234567788884 78888876555 66777888889999
Q ss_pred hHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccc
Q 045073 219 FTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFI 298 (402)
Q Consensus 219 ~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (402)
+.|+++||+|||+.+..+..+..+..+.+.... ...............+...+..+....
T Consensus 330 ~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (496)
T PRK03893 330 VGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIG--------------------GANVWVLGLLLFFQQMLGQGISGLLPK 389 (496)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHHHHHHHhhcc--------------------ccHHHHHHHHHHHHHHHhcccchhhHH
Confidence 999999999999988877655444433222210 111122222222222223334445666
Q ss_pred ccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHH
Q 045073 299 VPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVN 353 (402)
Q Consensus 299 ~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (402)
++.|.+|++.|++++|+.+....+|+.++|.+.+.+.+.. ++...+...++..
T Consensus 390 ~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~--g~~~~~~~~~~~~ 442 (496)
T PRK03893 390 LIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRL--DLGTALASLSFSL 442 (496)
T ss_pred HHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccC--ChHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999887 7776665544433
No 27
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.87 E-value=2.2e-20 Score=172.84 Aligned_cols=276 Identities=18% Similarity=0.172 Sum_probs=174.1
Q ss_pred CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073 2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV 81 (402)
Q Consensus 2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i 81 (402)
++....++.|++|+++|+++.++.+.+..+|.++++.++..+....... ....++||+.|++.++
T Consensus 114 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~---------------~~~~~~w~~~~~~~~~ 178 (394)
T TIGR00883 114 WGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDD---------------ALLEWGWRIPFLVSAV 178 (394)
T ss_pred ccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH---------------HhhccchHHHHHHHHH
Confidence 4567889999999999999999999999999999999887765322110 1145789999999877
Q ss_pred HHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073 82 PAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST 161 (402)
Q Consensus 82 ~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (402)
..++..+....+||+|++... +++++ +.+.. .....+++++.++.....
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------------~~~~~-----~~~~~~~~~~~~~~~~~~ 227 (394)
T TIGR00883 179 LVLIGLYLRRNLEETPVFEKA--QEKHK------------------------KKRGP-----IRETLTKHRKPFLLGLGL 227 (394)
T ss_pred HHHHHHHHHHhcCCChhHHHH--Hhccc------------------------cccCC-----HHHHHHhchHHHHHHHHH
Confidence 777766666667887754211 00000 00001 111122222234444445
Q ss_pred HHHHHHHHHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073 162 WFLLDIAFYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240 (402)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~ 240 (402)
.+......+....+.|.+. ++.|.+..+.+. ......+..+++.++.++++||+|||+.+.....+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~ 295 (394)
T TIGR00883 228 VIATTTTFYLITTYLPTYLTQTLGLSANSALL------------VLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLA 295 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChhHHHH------------HHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence 5555556667777888888 457777665443 556667778888889999999999999877554443
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHH-HH
Q 045073 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISA-AA 319 (402)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~-~~ 319 (402)
.+.......... . ..............++......+...++..|.+|++.|+++.++.. ..
T Consensus 296 ~~~~~~~~~~~~--~----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 357 (394)
T TIGR00883 296 ALLAVPLLMALL--D----------------SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLA 357 (394)
T ss_pred HHHHHHHHHHHh--c----------------CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhH
Confidence 332211111110 0 1111222222222222233344567788899999999999999854 44
Q ss_pred HHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHH
Q 045073 320 GKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNF 354 (402)
Q Consensus 320 ~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (402)
..+|..++|.+.+.+.+..+ .+...++..+++.+
T Consensus 358 ~~~g~~~~p~~~g~l~~~~g-~~~~~~~~~~~~~l 391 (394)
T TIGR00883 358 GAIFGGFAPYIAAALVAMTG-DWYAIGYYLAALAL 391 (394)
T ss_pred HHHHhhHHHHHHHHHHHHcC-cchhHHHHHHHHHH
Confidence 56788899999999998773 26555555544443
No 28
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.87 E-value=2.1e-20 Score=173.12 Aligned_cols=291 Identities=13% Similarity=0.125 Sum_probs=178.4
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
+....++.|++|+++|++++++.+.+..+|.++++.+++.+. ...+||+.|++.++.
T Consensus 101 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~-----------------------~~~~~~~~~~~~~~~ 157 (399)
T TIGR00893 101 PGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWIL-----------------------IHFSWQWAFIIEGVL 157 (399)
T ss_pred hHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHH-----------------------HhCCchHHHHHHHHH
Confidence 556789999999999999999999999999999999998876 557899999987766
Q ss_pred HHHHHH-HHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073 83 AALTYY-WRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST 161 (402)
Q Consensus 83 ~~~~~~-~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (402)
.++..+ ..+++||+|+.. +...+++.+...+.... +.++. ++++..++.+++..++ +.++.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~----~~~~~----~~~~~~~~~~~~~~~~---~~~~~~~~~ 223 (399)
T TIGR00893 158 GIIWGVLWLKFIPDPPQKA---KWLTEEEKYIVVGGLLA----EQQGK----GPSTPKKYQIKELLKD---RRVWGLALG 223 (399)
T ss_pred HHHHHHHhhheecCCCCcc---ccCCHHHHhhcchhhcc----ccccc----cccCCCccchHHHhcC---HHHHHHHHH
Confidence 665444 444567765421 11111111100000000 00000 0001111111121111 234444555
Q ss_pred HHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHH-HHHH
Q 045073 162 WFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLG-GFLL 239 (402)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~-~~~~ 239 (402)
.+......+....+.|.++++ .|.+..+.+. ......++.+++.++.+++.||++||+.... ....
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 291 (399)
T TIGR00893 224 QFLVNIGLGFFLTWFPTYLVQERGLSILEAGF------------MASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKT 291 (399)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHhcccHHHhhH------------HHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHH
Confidence 555556666777788888754 6777665444 6667778888999999999999999962111 1111
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073 240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA 319 (402)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 319 (402)
..++.+............ ... ......... .+...+..+..+++..|.+|++.|+++.|+.+..
T Consensus 292 ~~~~~~~~~~~~~~~~~~--------------~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 355 (399)
T TIGR00893 292 AIIAGLVLSLLMFATNYV--------------NIP-YAALALVAL-GFFGLGAGAIGWALISDNAPGNIAGLTGGLINSL 355 (399)
T ss_pred HHHHHHHHHHHHHHhccc--------------hhH-HHHHHHHHH-HHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHH
Confidence 111111111111000000 111 222222222 2223335677888999999999999999999999
Q ss_pred HHHhHHHHhHhHHhhhhccCCc-chhhHHHHHHHHHHHhhhe
Q 045073 320 GKAGAIVGAFGVQYYTQKGDKQ-IKQSIITLAVVNFLGFLCS 360 (402)
Q Consensus 320 ~~~g~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~ 360 (402)
..+|..++|.+.+.+.+.. + +...+.+.+++.+++.+..
T Consensus 356 ~~~g~~~~~~i~g~l~~~~--g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 356 GNLGGIVGPIVIGAIAATT--GSFAGALMVVAALALIGALSY 395 (399)
T ss_pred HHHhhhhhhHHhhhhccCC--CchhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999877 5 7888888777777665544
No 29
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.87 E-value=6.1e-20 Score=173.67 Aligned_cols=291 Identities=12% Similarity=0.078 Sum_probs=180.6
Q ss_pred CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCC-chhHHHHHHhH
Q 045073 2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGD-YLWRIVLMFGA 80 (402)
Q Consensus 2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Wr~~f~~~~ 80 (402)
+|....++.|++|+++|++++++...+..+|.++++.+++.+. .. .+||+.|++.+
T Consensus 149 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~-----------------------~~~~gw~~~f~i~~ 205 (465)
T TIGR00894 149 SPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLC-----------------------ESWGGWPMIFYVFG 205 (465)
T ss_pred hhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------hccCCCCeehhhhh
Confidence 4567889999999999999999999999999999999998876 44 48999999977
Q ss_pred HHHHHHHHH-HhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHH
Q 045073 81 VPAALTYYW-RMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTT 159 (402)
Q Consensus 81 i~~~~~~~~-~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (402)
+++++..+. ..+.+|+|+.. ++..+++.+...+. .+++.++ .+ ....++. ..++ +.++...
T Consensus 206 ~~~~~~~~~~~~~~~~~p~~~---~~~~~~~~~~i~~~----~~~~~~~-----~~---~~~~~~~-~~~~--~~~~~~~ 267 (465)
T TIGR00894 206 IVGCAWSLLWFVFPADDPSIH---PCISKFEKKYINSS----LQGQKGS-----TR---QSLPIKA-IPKS--LPVWAIW 267 (465)
T ss_pred HHHHHHHHHHHHHhcCCcccC---CCCCHHHHHHHHhh----cccccCC-----CC---CCCCHHH-HhcC--HHHHHHH
Confidence 777665444 44467887541 11111111111110 0000000 00 0011122 2222 2456666
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH-----
Q 045073 160 STWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ----- 233 (402)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~----- 233 (402)
+..++.....+....|+|.++++ +|++..+.+. ......++.+++.+++|+++||+++|+..
T Consensus 268 ~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~------------~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~ 335 (465)
T TIGR00894 268 FAIFGHFWLYTILPTYLPTFISWVLRVSGKENGL------------LSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAA 335 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHH------------HHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHH
Confidence 66777777888888899999865 7888776554 66677888889999999999998654211
Q ss_pred ---HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhh
Q 045073 234 ---LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRS 310 (402)
Q Consensus 234 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 310 (402)
..+......+...+.... .. ......+..+.+. ++...+..+..+....|..|. .+|
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~--~~----------------~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~-~~g 395 (465)
T TIGR00894 336 RKIFNGIGGLGPGIFAYALPY--LS----------------AAFYLTIIILTLA-NAVSSGPLAGVLINSLDLAPR-FLG 395 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--cC----------------CchHHHHHHHHHH-HHHhhhhhhhhhhchhhcChh-HHH
Confidence 111111111111111111 00 1111222222222 222222333444455677665 899
Q ss_pred hhhhHHHHHHHHhHHHHhHhHHhhhhccCC-cchhhHHHHHHHHHHHhhheeeeec
Q 045073 311 TCHGISAAAGKAGAIVGAFGVQYYTQKGDK-QIKQSIITLAVVNFLGFLCSFMVPE 365 (402)
Q Consensus 311 ~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~~~~~e 365 (402)
++.++.+..+.++++++|.+.+.+.+..+. +|...|.+.++..+++.++..+.+.
T Consensus 396 ~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~ 451 (465)
T TIGR00894 396 FIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIFGS 451 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeeeec
Confidence 999999999999999999999988764311 4778888888888888877766543
No 30
>PRK03545 putative arabinose transporter; Provisional
Probab=99.87 E-value=5.4e-20 Score=170.06 Aligned_cols=262 Identities=11% Similarity=0.098 Sum_probs=169.3
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
+...+++.|++|+++|++++++...+..+|.++++.+++.+. +..|||+.|++.++.
T Consensus 116 ~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~-----------------------~~~gw~~~f~~~~~~ 172 (390)
T PRK03545 116 SITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIG-----------------------QYLGWRTTFLAIGGG 172 (390)
T ss_pred HHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHH-----------------------HHhcHHHHHHHHHHH
Confidence 455688999999999999999999999999999999998876 557899999997776
Q ss_pred HHHHH-HHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073 83 AALTY-YWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST 161 (402)
Q Consensus 83 ~~~~~-~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (402)
+++.. +...++||.|+. +++. .+. .....+++ .++.....
T Consensus 173 ~~l~~~~~~~~~~~~~~~----~~~~---~~~------------------------------~~~~~~~~--~~~~~~~~ 213 (390)
T PRK03545 173 ALITLLLLIKLLPLLPSE----HSGS---LKS------------------------------LPLLFRRP--ALVSLYLL 213 (390)
T ss_pred HHHHHHHHHHhCCCCCCC----Ccch---HHH------------------------------HHHHHhCc--HHHHHHHH
Confidence 66544 334456765421 1100 000 01111111 11222222
Q ss_pred HHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073 162 WFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240 (402)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~ 240 (402)
.+......+....+.+.++++ .|.+..+.+. ......++.+++.++.+++.||++||.... +..+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~------------~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~ 280 (390)
T PRK03545 214 TVVVVTAHFTAYSYIEPFVQQVAGLSENFATL------------LLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALL 280 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCccHHHH------------HHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHH
Confidence 222223333444555656554 6777765444 566677788999999999999999886544 33333
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG 320 (402)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~ 320 (402)
.++...+... .+......+..+..+.......+.......+..| +.|+++.|+.+...
T Consensus 281 ~~~~~~l~~~---------------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~ 338 (390)
T PRK03545 281 LVCLLLLLPA---------------------ANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIF 338 (390)
T ss_pred HHHHHHHHHH---------------------hchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHH
Confidence 3333222211 1111222223333333333333445556677766 57899999999999
Q ss_pred HHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073 321 KAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 321 ~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 363 (402)
++|..+||.+.|.+.+.. +++..+.+.+++.+++.++.+..
T Consensus 339 ~~g~~~G~~~~G~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 339 NIGIGAGALLGNQVSLHL--GLSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred HHHHHHHHHHHHHHHhcc--ChhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988 88999999888888877776544
No 31
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.86 E-value=1.1e-19 Score=161.11 Aligned_cols=264 Identities=16% Similarity=0.135 Sum_probs=180.9
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
+.+.++.++..|+++|++++++...+..++.++|..+|.++- +.+|||..|++.++.
T Consensus 120 ~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig-----------------------~~~GWR~~F~~ia~l 176 (394)
T COG2814 120 SIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLG-----------------------QLFGWRATFLAIAVL 176 (394)
T ss_pred HHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHH-----------------------HHhhHHHHHHHHHHH
Confidence 456778899999999999999999999999999999999987 779999999998777
Q ss_pred HHHHHH-HHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073 83 AALTYY-WRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST 161 (402)
Q Consensus 83 ~~~~~~-~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (402)
+++.++ .+..+| |+- . .+..+...+ +. .+..+++ ..+.....
T Consensus 177 ~ll~~~~~~~~lP--~~~--~-~~~~~~~~~-------------------------~~----~~~l~~p---~v~~~l~~ 219 (394)
T COG2814 177 ALLALLLLWKLLP--PSE--I-SGSLPGPLR-------------------------TL----LRLLRRP---GVLLGLLA 219 (394)
T ss_pred HHHHHHHHHHhCC--Ccc--C-CCCCCcchh-------------------------HH----HHHhcCc---hHHHHHHH
Confidence 777554 455688 221 0 111100000 00 1111122 33334444
Q ss_pred HHHHHHHHHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073 162 WFLLDIAFYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240 (402)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~ 240 (402)
.+....+.|....|...++ +..|++....+. ....++++.++|+.++|++.|| +.|+.+.....+.
T Consensus 220 t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~------------~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~ 286 (394)
T COG2814 220 TFLFMTGHFALYTYIRPFLESVAGFSVSAVSL------------VLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLL 286 (394)
T ss_pred HHHHHcchhhhHHhHHHHHHHccCCCHhHHHH------------HHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHH
Confidence 4444445555555665555 457888876555 7788899999999999999999 8888888777777
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG 320 (402)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~ 320 (402)
.+..+.+.+. .++...........++.............++ .-++.++.+.++.....
T Consensus 287 a~~~l~l~~~---------------------~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~ 344 (394)
T COG2814 287 ALALLALTFT---------------------GASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAF 344 (394)
T ss_pred HHHHHHHHHh---------------------cchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHH
Confidence 7666665553 1222222222222222222222233333444 33578899999999999
Q ss_pred HHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073 321 KAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 321 ~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 363 (402)
++|..+|..+.+.+.++. ++....+..++..+++.++.+..
T Consensus 345 nlgia~GA~lGG~v~~~~--g~~~~~~~~a~l~~~a~~~~~~~ 385 (394)
T COG2814 345 NLGIALGAALGGLVLDAL--GYAATGWVGAALLLLALLLALLS 385 (394)
T ss_pred HHHHHHHHHHHHHHHHhh--chHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999987 88889999888888887776654
No 32
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.85 E-value=8.2e-20 Score=175.11 Aligned_cols=305 Identities=21% Similarity=0.253 Sum_probs=197.7
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
.++..+++|+.++++|+.++.+ ......|..+++.+++++. . +||+.+++..++
T Consensus 190 ~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~-----------------------~--~Wr~~~~~~~~~ 243 (521)
T KOG0255|consen 190 TVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYIT-----------------------R--DWRWLFWIISIP 243 (521)
T ss_pred HHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHH-----------------------h--hHHHHHHHHHHH
Confidence 4567889999999999999999 6666667777777776665 2 799999999999
Q ss_pred HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhcccc-----ccccccC---CCC---CC-CCCccccccchhhhhhh
Q 045073 83 AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTD-----LTVATSA---YPV---PV-SPEASTYGLFSKEFVQK 150 (402)
Q Consensus 83 ~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~---~~~---~~-~~~~~~~~~~~~~~~~~ 150 (402)
+++.++.+++.||||||+.. +++.+++.+.+++..+.+ ..+..+. .++ .. +++....++++.+..+
T Consensus 244 ~~~~~~~~~l~~Es~rwl~~-~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~- 321 (521)
T KOG0255|consen 244 SGLFLLLWFLPPESPRWLLS-KGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLR- 321 (521)
T ss_pred HHHHHHHHHccCcChHHHHH-cCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHH-
Confidence 99887777777899999865 455566666666654322 1000000 000 00 1112234444444333
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchh
Q 045073 151 HGLHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRF 230 (402)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr 230 (402)
+.++...+.++.....+|+....... +|.+... ..........++....+...|++|||
T Consensus 322 --~~~~~~~~~~~~~~~~y~gl~~~~~~----lg~~~~~---------------~~~~~~~~~~p~~~~~~~~~~~~gR~ 380 (521)
T KOG0255|consen 322 --YRTLYLLFIWFVFSLVYYGLSLNVSG----LGGNIYL---------------NFTLSGLVELPAYFRNGLLLPEFGRR 380 (521)
T ss_pred --HHHHHHHHHHHHHhHHHHhhhhhhhh----cCchHHH---------------HHHHHHHHHhhHHHHHHHHHHHhCcH
Confidence 35666666666667777776554433 3333221 23333336667777788999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhh
Q 045073 231 IIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRS 310 (402)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 310 (402)
.....+.++..++++..++.... ...+...++..+..++...+.. ..+.+.+|++|+..|.
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~el~pt~~r~ 441 (521)
T KOG0255|consen 381 PPLFLSLFLAGIGLLLFGWLPDD------------------LGGWLHWILPLLGKFFIGSAFN-LIFLYSAELIPTVVRN 441 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcc------------------chhHHHHHHHHHHHHHHHHHHH-HHHHHHHhhccHHHHH
Confidence 99999999888888887775321 1111223333333333344444 4588999999999999
Q ss_pred hhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhe-eeeeccCCccccccccch
Q 045073 311 TCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCS-FMVPETNGLSLEELSGED 378 (402)
Q Consensus 311 ~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~-~~~~et~~~~~~~~~~~~ 378 (402)
.+.+......+++++++|.+....... .....+.+++....+...+. .++|||+++.+.+..++.
T Consensus 442 ~~~~~~~~~~~~~~i~ap~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~~~ 507 (521)
T KOG0255|consen 442 TAVGAISAAARLGSILAPLFPLLLRQM---FPLLGLILFGWLALLLGLLSLLLLPETKGKPLPGTLLDA 507 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh---cccchHHHHHHHHHHHHHHHHhcCcccCCCCCchhHHHH
Confidence 999999999999999999877655542 22223333455555555444 677999999886554443
No 33
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.85 E-value=2e-19 Score=170.23 Aligned_cols=276 Identities=12% Similarity=0.045 Sum_probs=175.2
Q ss_pred cchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCC-CchhHHHHHHhHHH
Q 045073 4 LSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQG-DYLWRIVLMFGAVP 82 (402)
Q Consensus 4 ~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Wr~~f~~~~i~ 82 (402)
...+++.|++|+++|+++.++...+..+|.++++.++..+. + ..|||..|++.++.
T Consensus 127 ~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~-----------------------~~~~GWr~~f~i~a~l 183 (491)
T PRK11010 127 VFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLA-----------------------DRYLGWQGMYWLMAAL 183 (491)
T ss_pred HHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------hcccCHHHHHHHHHHH
Confidence 35678899999999999999999999999999999988886 4 46999999997777
Q ss_pred HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073 83 AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW 162 (402)
Q Consensus 83 ~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (402)
.++..+..+++||+++.. +++++.. +. ..+.+++ ..+++. .+......
T Consensus 184 ~ll~~l~~~~~~e~~~~~---~~~~~~~-~~-------------------------~~~~l~~-~~~~~~--~~~~ll~~ 231 (491)
T PRK11010 184 LIPCIIATLLAPEPTDTI---PVPKTLE-QA-------------------------VVAPLRD-FFGRNN--AWLILLLI 231 (491)
T ss_pred HHHHHHHHHhcCCCcccc---ccccchh-hh-------------------------HHHHHHH-HHcCcC--HHHHHHHH
Confidence 777666666688875421 1100000 00 0000111 111111 11111111
Q ss_pred HHHHHHHHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHH-HHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073 163 FLLDIAFYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMF-LVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240 (402)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~ 240 (402)
+......+....+.+.++ ++.|++..+.+. .. ....++.++|.+++|+++||+|+|+.+..+.++.
T Consensus 232 ~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~------------~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~ 299 (491)
T PRK11010 232 VLYKLGDAFAMSLTTTFLIRGVGFDAGEVGL------------VNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQ 299 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 222223333334445554 558888887554 43 4556788899999999999999988777665554
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG 320 (402)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~ 320 (402)
++..+.+..... .. .+.........+.....+.+. +..+++..+..+++.+++..++.+...
T Consensus 300 ~l~~l~~~~l~~-~~----------------~~~~~l~~~~~l~~~~~g~~~-~~~~a~~~~l~~~~~~~t~~gl~~s~~ 361 (491)
T PRK11010 300 GVSNAGYWLLSI-TD----------------KNLYSMGAAVFFENLCGGMGT-AAFVALLMTLCNKSFSATQFALLSALS 361 (491)
T ss_pred HHHHHHHHHHHh-cc----------------ccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence 444333222111 00 111111111111111111111 234677788999999999999999999
Q ss_pred HHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeecc
Q 045073 321 KAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPET 366 (402)
Q Consensus 321 ~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et 366 (402)
.+|..+++.+.|.+.+.. ||...|.+.+++.+++.++.++++++
T Consensus 362 ~lg~~~~~~~~G~l~~~~--G~~~~f~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 362 AVGRVYVGPVAGWFVEAH--GWPTFYLFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHHHHHHh--ChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999998888999999987 88899999888888887777666544
No 34
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.85 E-value=9.2e-20 Score=170.93 Aligned_cols=297 Identities=13% Similarity=0.136 Sum_probs=173.9
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
+....++.|++|+++||+++++.+.+..+|..+++.+...... ...+||+.|++.+++
T Consensus 137 ~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~----------------------~~~~w~~~f~~~~~~ 194 (438)
T TIGR00712 137 PPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMA----------------------WFNDWHAALYFPAIC 194 (438)
T ss_pred HHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHH----------------------HhhhhHHHHHHHHHH
Confidence 4456788899999999999999999999999988877655431 336899999997777
Q ss_pred HHH-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073 83 AAL-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST 161 (402)
Q Consensus 83 ~~~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (402)
+++ .++..+++||+|+... .++.++. +.+..++..+ + .+++.+..+.+.+...++ +.++.....
T Consensus 195 ~~i~~~~~~~~~~~~~~~~~---~~~~~~~-------~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 259 (438)
T TIGR00712 195 AIIVALFAFAMMRDTPQSCG---LPPIEEY-------RNDYPDDYNE--K-AEQELTAKEIFMQYVLPN--KLLWYIAIA 259 (438)
T ss_pred HHHHHHHHHHhccCCHHhcC---CCCchhc-------cccccccccc--c-cccccchHHHHHHHHccC--chHHHHHHH
Confidence 665 4455566888875411 0110000 0000000000 0 000011111111112222 234444444
Q ss_pred HHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073 162 WFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240 (402)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~ 240 (402)
.++.....++...+.|.++++ .|+++.+.+. ...+..+..+++.+++|++.||+++++....+....
T Consensus 260 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~------------~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~ 327 (438)
T TIGR00712 260 NVFVYLLRYGVLDWSPTYLKEVKHFALDKSSW------------AYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFM 327 (438)
T ss_pred HHHHHHHHHHHHHhHHHHHHHccCCChhhHHH------------HHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHH
Confidence 444445667778889999876 5888776544 566677788899999999999996443222222222
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG 320 (402)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~ 320 (402)
.+..+....... ... .+.+.. ....+..+....+..........|.+|++.|+++.|+.+...
T Consensus 328 ~~~~~~~~~~~~--~~~--------------~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 390 (438)
T TIGR00712 328 TLVTIAVIVYWM--NPA--------------GNPLVD-MICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFG 390 (438)
T ss_pred HHHHHHHHHHHh--cCC--------------CchHHH-HHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHH
Confidence 111111111110 000 111111 111112222122222222345679999999999999999988
Q ss_pred HHhH-HHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee-eccC
Q 045073 321 KAGA-IVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV-PETN 367 (402)
Q Consensus 321 ~~g~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~et~ 367 (402)
++++ +++|.+.+.+.+.. ++...+.+.+++.+++.+..+++ ||.|
T Consensus 391 ~~gg~~~gp~l~G~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 391 YLGGSVAASAIVGYTVDFF--GWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred HhhhhhhcchhHHHHHHhc--cchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 8875 68999999999977 78888888887777776666544 6644
No 35
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.84 E-value=3.2e-19 Score=164.11 Aligned_cols=265 Identities=12% Similarity=0.025 Sum_probs=166.5
Q ss_pred cchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHH
Q 045073 4 LSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPA 83 (402)
Q Consensus 4 ~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~ 83 (402)
....++.|++| ++|+++.++...+.++|.++++.+...+. +..+||+.|++.++..
T Consensus 111 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----------------------~~~~~~~~f~~~~~~~ 166 (377)
T TIGR00890 111 IALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVI-----------------------NLEGVPAAFIYMGIIF 166 (377)
T ss_pred hHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHH-----------------------hcccHHHHHHHHHHHH
Confidence 34556778887 67999999999999999887666655554 4568999999977766
Q ss_pred HHHHHH-HhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073 84 ALTYYW-RMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW 162 (402)
Q Consensus 84 ~~~~~~-~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (402)
++..+. .++++|+|+. . ++++++. .+++... ++..+++ ..+......
T Consensus 167 ~~~~~~~~~~~~~~~~~--~-~~~~~~~----------------------~~~~~~~----~~~~~~~---~~~~~~~~~ 214 (377)
T TIGR00890 167 LLVIVLGAFLIGYPPGQ--L-IKTNIEV----------------------SVKDYTV----WEMLRTP---QFWVLYLSF 214 (377)
T ss_pred HHHHHHHHHheecCchh--c-cccCccc----------------------chhhhhH----HHHHcCc---cHHHHHHHH
Confidence 664443 4445554321 0 0000000 0000000 1111111 122222222
Q ss_pred HHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHH
Q 045073 163 FLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSI 242 (402)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~ 242 (402)
+...........+.+.+.++.|.+..+.+. ......++.+++.++.|++.||+|||+.+..+..+..+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 282 (377)
T TIGR00890 215 FLNAVSGLLLIGLYKPYGQSLGLSDGFLVL------------AVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAV 282 (377)
T ss_pred HHHhHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHH
Confidence 222223333334455566777777655443 66677788889999999999999999998888777766
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHH
Q 045073 243 CMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKA 322 (402)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 322 (402)
+.+.+..... ... ..........+.......+....+..|.+|++.|+++.|+.+....+
T Consensus 283 ~~~~~~~~~~-------------------~~~-~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 342 (377)
T TIGR00890 283 GMAAMLFIPM-------------------LND-VLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAV 342 (377)
T ss_pred HHHHHHHccc-------------------chh-HHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHH
Confidence 6655443210 111 11111122222222333345566789999999999999999999999
Q ss_pred hHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhh
Q 045073 323 GAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFL 358 (402)
Q Consensus 323 g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i 358 (402)
|..++|.+.+.+.+.. +|+..|.+.+++.+++.+
T Consensus 343 g~~~~~~~~g~l~~~~--g~~~~f~~~~~~~~~~~~ 376 (377)
T TIGR00890 343 AGIFGGLIASHALTEI--GFEYTFIVTGAFALTSLA 376 (377)
T ss_pred HHHHHHHHHHHHHhhh--chhhHHHHHHHHHHHhcc
Confidence 9999999999998877 888898888887776643
No 36
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.84 E-value=2.6e-19 Score=169.21 Aligned_cols=280 Identities=12% Similarity=0.029 Sum_probs=154.4
Q ss_pred chhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHH
Q 045073 5 SAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAA 84 (402)
Q Consensus 5 ~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~ 84 (402)
+..+++|++|+++||+++++......+|..+++.+...+........ ..+..|||+.|++.+++++
T Consensus 144 ~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~--------------~~~~~gWr~~f~i~g~l~l 209 (476)
T PLN00028 144 CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAG--------------APSFTAWRIAFFVPGLLHI 209 (476)
T ss_pred HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------------CcchhhhHHHHHHHHHHHH
Confidence 34578999999999999999987777888777766654432211100 0023589999999777666
Q ss_pred HHHHHHhhc-cCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHH
Q 045073 85 LTYYWRMKM-PETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWF 163 (402)
Q Consensus 85 ~~~~~~~~~-pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (402)
+..+..+++ ++.|+- +.++. .+ + .+ .++....+.++..... +.++...+.++
T Consensus 210 ~~~l~~~~~~~~~p~~------~~~~~----~~--------~-~~-----~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 262 (476)
T PLN00028 210 IMGILVLTLGQDLPDG------NYREL----KK--------S-GT-----MPKDSFSKVLRYGVTN---YRTWILALTYG 262 (476)
T ss_pred HHHHHHHHHcCcCCCC------chhhH----Hh--------c-Cc-----cccccHHHHHHHHHcC---chhHHHHHHHH
Confidence 654444444 444421 00000 00 0 00 0000011111111111 12333333333
Q ss_pred HHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhH-------HHHH
Q 045073 164 LLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFI-------IQLG 235 (402)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~-------~~~~ 235 (402)
......+....+.|.++. ..|++..+++. ...+..++.+++.+++|+++||++||+ ....
T Consensus 263 ~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~------------~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~ 330 (476)
T PLN00028 263 YSFGVELTMDNIIAEYFYDRFGLSLETAGA------------IAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWI 330 (476)
T ss_pred HHHHHHHHHHhHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHH
Confidence 333444555667777764 46888776554 677778888999999999999998762 2222
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhH
Q 045073 236 GFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGI 315 (402)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~ 315 (402)
...+.++..+++... .+.......+.+. ++......+..+++..+..| +.|+++.|+
T Consensus 331 ~~~l~~i~~~~~~~~---------------------~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~ 387 (476)
T PLN00028 331 VQTLGGVFCIWLGRA---------------------NSLGAAIVVMILF-SIFVQAACGATFGIVPFVSR-RSLGVISGL 387 (476)
T ss_pred HHHHHHHHHHHhccc---------------------chHHHHHHHHHHH-HHHHHHhhhhhcccCcccCh-hhchhhhhh
Confidence 222111211111110 1111112111121 22112222345556667655 789999999
Q ss_pred HHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073 316 SAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 316 ~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 363 (402)
.+..+.+|+++++.+.+. .+.. +|...|.+.+++.+++.++.+++
T Consensus 388 ~~~~g~lg~~i~~~l~~~-~~~~--~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 388 TGAGGNVGAVLTQLLFFT-GSSY--STETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred hhccccHHHHHHHHHHHh-cCCc--cHhhHHHHHHHHHHHHHHHHHhe
Confidence 988887888877766541 1111 58888988888888887777655
No 37
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.84 E-value=4e-19 Score=164.26 Aligned_cols=289 Identities=13% Similarity=0.136 Sum_probs=193.6
Q ss_pred CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073 2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV 81 (402)
Q Consensus 2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i 81 (402)
+|+...+.+.|+|++||++..++...+..+|.+++-.+++.+.. ...||+.+|++.++
T Consensus 146 ~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~----------------------s~~GW~sifY~~g~ 203 (466)
T KOG2532|consen 146 FPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCE----------------------SSLGWPSIFYVFGI 203 (466)
T ss_pred HhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc----------------------cCCCCchHHHHHHH
Confidence 67788999999999999999999999999999999999998871 24899999999777
Q ss_pred HHHHHHH-HHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073 82 PAALTYY-WRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS 160 (402)
Q Consensus 82 ~~~~~~~-~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (402)
.+++..+ ..++..|+|.- ++.-.+++.+.+.+-...+ +. + +. .+.-.+...+. ..++.+.+
T Consensus 204 ~g~i~~~~w~~~~~d~P~~---h~~is~~El~~I~~~k~~~---~~-------~--~~-~~vP~~~i~ts--~~vwai~~ 265 (466)
T KOG2532|consen 204 VGLIWFILWFLFYSDSPSK---HPNISEKELKYIEKGKSEA---HV-------K--KK-PPVPYKAILTS--PPVWAIWI 265 (466)
T ss_pred HHHHHHHHHHHHhcCCccc---CCCCCHHHHHHHHhccccc---cc-------C--CC-CCCCHHHHHcC--HHHHHHHH
Confidence 7776544 45557888864 1223333333333211110 00 0 00 11112222222 37888899
Q ss_pred HHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccch---------h
Q 045073 161 TWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGR---------F 230 (402)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~gr---------r 230 (402)
..++...+++....|+|.|+++ +|++..+.+. ..++..+...+..+++|.++||+.+ |
T Consensus 266 ~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~------------~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rk 333 (466)
T KOG2532|consen 266 SAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGF------------LSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRK 333 (466)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhH------------HHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHH
Confidence 9999999999999999999986 8888887776 8888888999999999999999855 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhh
Q 045073 231 IIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRS 310 (402)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 310 (402)
..-.++....+++++.+++. .. ...+..++++.+..++ .+.....+........+++-+
T Consensus 334 ifn~i~~~~~ai~l~~l~~~----~~---------------~~~~~a~~~l~~~~~~--~g~~~~Gf~~~~~~~apq~a~ 392 (466)
T KOG2532|consen 334 IFNTIAFGGPAVFLLVLAFT----SD---------------EHRLLAVILLTIAIGL--SGFNISGFYKNHQDIAPQHAG 392 (466)
T ss_pred HHHhHHHHHHHHHHHeeeec----CC---------------CcchHHHHHHHHHHHH--cccchhhhHhhhhhccchHHH
Confidence 22233333333333333332 11 1122223333222222 222212222222221457779
Q ss_pred hhhhHHHHHHHHhHHHHhHhHHhhhh-ccCCcchhhHHHHHHHHHHHhhheeee
Q 045073 311 TCHGISAAAGKAGAIVGAFGVQYYTQ-KGDKQIKQSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 311 ~~~~~~~~~~~~g~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~i~~~~~ 363 (402)
..+|+.+....+.++++|.+.+.+.. ....+|+.+|++.+++.+++.++..++
T Consensus 393 ~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 393 FVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 99999999999999999999998884 211289999999999999988776665
No 38
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.84 E-value=5.7e-19 Score=163.86 Aligned_cols=264 Identities=11% Similarity=-0.024 Sum_probs=169.2
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
+...+++.|+.|+++|++++++.+.+..+|.++++.+++.+. ...+||+.+++.++.
T Consensus 131 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~-----------------------~~~g~~~~~~~~~~~ 187 (399)
T PRK05122 131 TGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLY-----------------------HWGGLAGLGLLIMLL 187 (399)
T ss_pred chHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHH-----------------------HcccHHHHHHHHHHH
Confidence 445677889999999999999999999999999999998886 567899998886665
Q ss_pred HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073 83 AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW 162 (402)
Q Consensus 83 ~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (402)
+++.++.....|+++. ++++++ + .....++.+.... ..
T Consensus 188 ~~~~~~~~~~~~~~~~-----~~~~~~----------------------------~-----~~~~~~~~~~~~~----~~ 225 (399)
T PRK05122 188 ALLGLLLARPRPAVPP-----VKGERL----------------------------P-----FRRVLGRVWPYGM----GL 225 (399)
T ss_pred HHHHHHHHhcCCCCCC-----CCccch----------------------------h-----HHHHHHHHHHHHH----HH
Confidence 5544443332333221 000000 0 0011111111111 11
Q ss_pred HHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHH
Q 045073 163 FLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSI 242 (402)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~ 242 (402)
......+.....+.+.++.+.|.+.. +. ......++.+++.++.+++.||+|||+.+..+..+.++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------------~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~ 291 (399)
T PRK05122 226 ALASIGFGTIATFITLYYAARGWDGA--AL------------ALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEIL 291 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccc--hH------------HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 11222334444566666666555221 11 33455667778888999999999999988887776666
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHH
Q 045073 243 CMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKA 322 (402)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 322 (402)
+.+++... .+.+... +..+..+++.....+.......|..|++.|+++.|+.+....+
T Consensus 292 ~~~~~~~~---------------------~~~~~~~-~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~ 349 (399)
T PRK05122 292 GLLLLWLA---------------------PSPWMAL-IGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDL 349 (399)
T ss_pred HHHHHHHh---------------------ccHHHHH-HHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 65544432 2222222 2222222222233344445667889999999999999999999
Q ss_pred hHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccCCc
Q 045073 323 GAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETNGL 369 (402)
Q Consensus 323 g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~~~ 369 (402)
|..+++.+.+.+.+.. +++..+.+.+++.+++.++.+++++++++
T Consensus 350 g~~~~~~~~g~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (399)
T PRK05122 350 SLGITGPLAGLVASWF--GYPSIFLAAALAALLGLALTWLLYRRAPR 394 (399)
T ss_pred HHHHHHHHHHHHHHHc--CHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 9999999999998877 88899998888888887776666554443
No 39
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.84 E-value=3.7e-20 Score=174.06 Aligned_cols=285 Identities=12% Similarity=0.054 Sum_probs=168.9
Q ss_pred cchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHH
Q 045073 4 LSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPA 83 (402)
Q Consensus 4 ~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~ 83 (402)
....++.|+++ ++|+++.++.+.+..+|..+++.+++.+. +..|||+.|++.+++.
T Consensus 128 ~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~-----------------------~~~gwr~~f~~~~~~~ 183 (455)
T TIGR00892 128 PSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLF-----------------------ESFGWRGSFLILGGLL 183 (455)
T ss_pred HHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHH-----------------------HHhChHHHHHHHHHHH
Confidence 34567788886 78999999999999999999999988876 5578999999977766
Q ss_pred HHHHHHHhhc-cCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073 84 ALTYYWRMKM-PETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW 162 (402)
Q Consensus 84 ~~~~~~~~~~-pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (402)
++..+..+++ ++.+.. +..+.+..+ . ...+...+ +. ......+...+.......++ +.++......
T Consensus 184 ~~~~v~~~~~~~~~~~~----~~~~~~~~~---~-~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 250 (455)
T TIGR00892 184 LHCCVCGALMRPVGPSQ----RVSKSKSKE---G-LPPDGSTK--KL-SKKSTAEKINRFLDFSLFTH--RGFLVYLSGN 250 (455)
T ss_pred HHHHHHHHHhCCCCccc----ccccccccc---c-CCCCCccc--cc-cccchhhhhhhhcchHHhcC--chHHHHHHHH
Confidence 6554444333 322211 000000000 0 00000000 00 00000000011111112222 1333444444
Q ss_pred HHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhcc--chhHHHHHHH--H
Q 045073 163 FLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRI--GRFIIQLGGF--L 238 (402)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~--grr~~~~~~~--~ 238 (402)
+.....++....+.|.+.++.|++..+.+. ......++.+++.++.+++.||. ++|+....+. +
T Consensus 251 ~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 318 (455)
T TIGR00892 251 VIMFLGFFAPIIFLVPYAKDKGVDEYEAAF------------LLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALL 318 (455)
T ss_pred HHHHHHccchHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHH
Confidence 444556666677888888888888776554 56667778888888999999973 3343333322 2
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHH
Q 045073 239 LMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAA 318 (402)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~ 318 (402)
..+++.++.... .+.+. +.+..+..++......+...+++.|.+|++.++++.|+.+.
T Consensus 319 ~~~l~~ll~~~~---------------------~~~~~-~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 376 (455)
T TIGR00892 319 FNGLTHLLCALA---------------------GDYTG-LVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTI 376 (455)
T ss_pred HHHHHHHHHHHh---------------------chHHH-HHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHH
Confidence 222222222111 22222 22233333333334445667788899999999999999999
Q ss_pred HHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhe
Q 045073 319 AGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCS 360 (402)
Q Consensus 319 ~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 360 (402)
...+|.+++|.+.+.+.+..+ +++..|++.+++.+++.+..
T Consensus 377 ~~~lg~~igp~i~G~l~~~~g-~~~~~f~~~~~~~li~~~~~ 417 (455)
T TIGR00892 377 VECCAVLIGPPLAGRLVDATK-NYKYIFYASGSIVVSAGLFL 417 (455)
T ss_pred HHHHHHHccccceeeeehhcC-CcchHHHHhhHHHHHHHHHH
Confidence 999999999999999988763 57788888877776665543
No 40
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.83 E-value=6.4e-19 Score=162.91 Aligned_cols=264 Identities=11% Similarity=0.051 Sum_probs=160.9
Q ss_pred cchhhhhhccCcccc--hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073 4 LSAVIMSEYANKRTR--GAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV 81 (402)
Q Consensus 4 ~~~~~i~e~~~~~~R--g~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i 81 (402)
....++.|+.+++.| +...++.+.+.++|.++++.+++.+. +..|||..|++.++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~-----------------------~~~gw~~~f~~~~~ 181 (393)
T PRK15011 125 QMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALA-----------------------MGFSFTVMYLSAAV 181 (393)
T ss_pred HHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHH-----------------------HhcChHHHHHHHHH
Confidence 445667777776655 44567888899999999999999986 56799999998776
Q ss_pred HHHHH-HHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073 82 PAALT-YYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS 160 (402)
Q Consensus 82 ~~~~~-~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (402)
..++. ++...++||.|+- ++..++ +.+ . .++ . ++ ..+....
T Consensus 182 ~~~~~~~~~~~~~~~~~~~----~~~~~~---------------~~~------~--------~~~-~-~~---~~~~~~~ 223 (393)
T PRK15011 182 AFIVCGVMVWLFLPSMRKE----LPLATG---------------TLE------A--------PRR-N-RR---DTLLLFV 223 (393)
T ss_pred HHHHHHHHHHhhcCccCCC----Cccccc---------------ccc------c--------ccc-c-cc---cHHHHHH
Confidence 66554 4445557886531 110000 000 0 000 0 01 0111111
Q ss_pred HHHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073 161 TWFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL 239 (402)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~ 239 (402)
..+.....++....+.|.+++ ++|++..+.+. ......+..+++.++.|+++||+|||+.+..+...
T Consensus 224 ~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~------------~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~ 291 (393)
T PRK15011 224 ICTLMWGTNSLYIINMPLFIINELHLPEKLAGV------------MMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVA 291 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHH
Confidence 111122233344456777764 47777765443 44444566677888999999999999887766544
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073 240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA 319 (402)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 319 (402)
..+........ .+.+..+....+...... ...+....+..|.+|+ .|+++.++.+..
T Consensus 292 ~~~~~~~~~~~---------------------~~~~~~l~~~~l~~~~~g-~~~~~~~~~~~~~~p~-~~g~~~~~~~~~ 348 (393)
T PRK15011 292 GVCFYAGMLMA---------------------HSPAILLGLQLLNAIYIG-ILGGIGMLYFQDLMPG-QAGSATTLYTNT 348 (393)
T ss_pred HHHHHHHHHHH---------------------hhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCC-CcchHHHHHHHH
Confidence 43332222111 111222211111111111 1112234556888886 489999999999
Q ss_pred HHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeec
Q 045073 320 GKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPE 365 (402)
Q Consensus 320 ~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~e 365 (402)
..+|..+++.+.+.+.+.. +++..+.+.+++.+++.+..+++||
T Consensus 349 ~~lg~~~g~~l~G~i~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 349 SRVGWIIAGSLAGIVAEIW--NYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999877 8888888888888888877776665
No 41
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.83 E-value=1.1e-18 Score=161.22 Aligned_cols=271 Identities=7% Similarity=-0.025 Sum_probs=175.6
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
+....++.|++| ++|+++++++..+..+|..+++.++..+.. ...+||+.+.+.++.
T Consensus 116 ~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~----------------------~~~~w~~~~~~~~~~ 172 (393)
T PRK09705 116 AVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQ----------------------HSETWYQTLAWWALP 172 (393)
T ss_pred hhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHH----------------------hcCCHHHHHHHHHHH
Confidence 455678889887 889999999999999999999998887751 224799988775555
Q ss_pred HHHHHHHHhhcc-CCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073 83 AALTYYWRMKMP-ETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST 161 (402)
Q Consensus 83 ~~~~~~~~~~~p-esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (402)
.++.++..+... +.|+ + ++ +++....+.++ ++ ..+...+.
T Consensus 173 ~~~~~~~~~~~~~~~~~------~--~~------------------------~~~~~~~~~l~----~~---~~~~l~~~ 213 (393)
T PRK09705 173 AVVALFAWWWQSAREVA------S--SH------------------------KTTTTPVRVVF----TP---RAWTLGVY 213 (393)
T ss_pred HHHHHHHHHHHhcCCCc------c--cc------------------------CCCcCCccccc----CH---hHHHHHHH
Confidence 544433332221 1110 0 00 00000011111 11 22333334
Q ss_pred HHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHH
Q 045073 162 WFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMS 241 (402)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~ 241 (402)
.+.....++....+.|.++++.|.+..+.+. ...+..++.+++.++.+++.||++||+.+..+..+..
T Consensus 214 ~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~------------~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~ 281 (393)
T PRK09705 214 FGLINGGYASLIAWLPAFYIEIGASAQYSGS------------LLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQL 281 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhhhhH------------HHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHH
Confidence 4444556777888899999888888776555 6777888999999999999999999998888776665
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccccccccc-ccchhhhhhhHHHHHH
Q 045073 242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELF-PARLRSTCHGISAAAG 320 (402)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~ 320 (402)
++..++.... ..... .... ..+.......+.......+.+ |++.|++..|+.+..+
T Consensus 282 ~~~~~~~~~~--------------------~~~~~-~~~~--l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 338 (393)
T PRK09705 282 VGFCGFIWLP--------------------LQLPV-LWAM--VCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIG 338 (393)
T ss_pred HHHHHHHHcc--------------------chHHH-HHHH--HHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Confidence 5544333210 11111 1111 112222233344444555666 4678999999999999
Q ss_pred HHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee-eccCCccc
Q 045073 321 KAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV-PETNGLSL 371 (402)
Q Consensus 321 ~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~et~~~~~ 371 (402)
.+++.++|.+.+++.+..+ ++...|.+.++++++..++.+.+ |||+.+..
T Consensus 339 ~~~~~~gp~~~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK09705 339 FIIAGLAPWFSGVLRSISG-NYLMDWAFHALCVVGLMIITLRFAPARFPQLW 389 (393)
T ss_pred HHHHHHHHHHHHHHHHHhC-CchHHHHHHHHHHHHHHHHHHHhccccccchh
Confidence 9999999999999999874 56777777777777666665544 88876543
No 42
>PRK03699 putative transporter; Provisional
Probab=99.83 E-value=4.7e-19 Score=163.93 Aligned_cols=269 Identities=11% Similarity=0.064 Sum_probs=172.9
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
+....++.|++|+++|+++++..+....+|..+++.+.+.+.. ...+||+.|.+.+++
T Consensus 114 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~----------------------~~~gw~~~f~~~~~~ 171 (394)
T PRK03699 114 SIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLA----------------------RSIEWYWVYACIGLV 171 (394)
T ss_pred cchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------------------ccccHHHHHHHHHHH
Confidence 4567889999999999999999988889999999888776641 346899999987666
Q ss_pred HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073 83 AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW 162 (402)
Q Consensus 83 ~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (402)
.++..++.++ .+.|+. ++++++ + +. +.. +.. .+ +.++...+..
T Consensus 172 ~~~~~~~~~~-~~~p~~----~~~~~~---------------~--~~----~~~-------~~~-~~---~~~~~~~~~~ 214 (394)
T PRK03699 172 YVAIFILTLF-SEFPAL----GKHAPK---------------A--DK----PVA-------KEK-WG---IGVLFLAIAA 214 (394)
T ss_pred HHHHHHHHHh-cCCccc----cccCcc---------------c--cC----ccc-------ccc-CC---hHHHHHHHHH
Confidence 6554443332 222321 000000 0 00 000 000 01 1233344444
Q ss_pred HHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHH
Q 045073 163 FLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMS 241 (402)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~ 241 (402)
+......+....|.|.+++ ..|++..+.+. ......++.+++.++.++++||++||+.+.....+..
T Consensus 215 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~------------~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~ 282 (394)
T PRK03699 215 LLYILAQLTFISWVPEYAQKKFGMSLEDAGN------------LVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLAL 282 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHhhH------------HHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHH
Confidence 4444566777889999985 47888776554 5666677888999999999999999998877665554
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHH
Q 045073 242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGK 321 (402)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 321 (402)
+...++... .+...... ..+..++...+..+...++..|..|. .++...+.......
T Consensus 283 ~~~~~~~~~---------------------~~~~~~~~-~~~~~G~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~ 339 (394)
T PRK03699 283 VLMYLFVNT---------------------DDPSHLLY-AILGLGFFSSAIYTTIITLGSQQTKV-ASPKLVNFILTCGT 339 (394)
T ss_pred HHHHHHHHc---------------------CCchHHHH-HHHHHHHHHHHHHHHHHHHHHHHccC-CCHHHHHHHHHhhh
Confidence 443333221 11112222 22222332333444555566676664 45777888888999
Q ss_pred HhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccC
Q 045073 322 AGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETN 367 (402)
Q Consensus 322 ~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~ 367 (402)
+|..++|.+.+.+.+.. +++..+++.+++.+++.+....++++.
T Consensus 340 ~g~~i~p~~~G~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (394)
T PRK03699 340 IGTMLTFVVTSPIVAHF--GLQAALLTANGLYAVVFVMCILLGFVS 383 (394)
T ss_pred HHHHHHHHHHHHHHHHh--CchhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999887 888888888888777766655555443
No 43
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.83 E-value=8e-19 Score=161.50 Aligned_cols=265 Identities=13% Similarity=0.105 Sum_probs=164.2
Q ss_pred CcchhhhhhccCcccchhH--HHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhH
Q 045073 3 PLSAVIMSEYANKRTRGAF--IAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGA 80 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~--~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~ 80 (402)
|...+++.|+.|+++|++. .+....+.++|.++++.+++.+. +..+||+.|++.+
T Consensus 106 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~-----------------------~~~~~~~~f~~~~ 162 (375)
T TIGR00899 106 PQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLA-----------------------LGFGFTVMFLTAA 162 (375)
T ss_pred HHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHH-----------------------HhcccHHHHHHHH
Confidence 3445677888888777754 57778888999999999998886 5578999999977
Q ss_pred HHHHHHHHH-HhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHH
Q 045073 81 VPAALTYYW-RMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTT 159 (402)
Q Consensus 81 i~~~~~~~~-~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (402)
++.++..+. .+++||+|+.. ++++.. . .. +...+++..+......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~-------------------------~---~~----~~~~~~~~~~~~~~~~ 208 (375)
T TIGR00899 163 LAFVLCGVLVWLFLPSYPRGA--PGALTR-------------------------L---EV----RGLLASRDTRLLFVAC 208 (375)
T ss_pred HHHHHHHHHHHHhCCCcccCc--ccccCc-------------------------c---hh----hhhhcCcchHHHHHHH
Confidence 776655444 45589877531 000000 0 00 0011111111111111
Q ss_pred HHHHHHHHHHHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHH
Q 045073 160 STWFLLDIAFYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFL 238 (402)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~ 238 (402)
+. ..........+.|.++ ++.|.++.+.+. ......+..+++.++.|++.||+|||+.+..+.+
T Consensus 209 ~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~g~------------~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~ 273 (375)
T TIGR00899 209 TL---MWGCNILYIINMPLLIIHELGLPDKLAGL------------MMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAAL 273 (375)
T ss_pred HH---HHHHHHHHHhhhHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHH
Confidence 11 1112223334556665 457777765443 3344445566777889999999999998877665
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHH
Q 045073 239 LMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAA 318 (402)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~ 318 (402)
...+....+... .+.+... ......++......+....+..|..|++ ++++.++.+.
T Consensus 274 ~~~~~~~~~~~~---------------------~~~~~~~-~~~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 330 (375)
T TIGR00899 274 AGVAFYTGLAAD---------------------NSLWALL-MLQLLNAIFIGILAGIGMLYFQDLMPGR-AGAATTLYTN 330 (375)
T ss_pred HHHHHHHHHHHH---------------------HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCcch-hhHHHHHHHH
Confidence 544433322221 1122222 2222222222222345566778888865 5699999999
Q ss_pred HHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeee
Q 045073 319 AGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVP 364 (402)
Q Consensus 319 ~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~ 364 (402)
..++|..++|.+.+.+.+.. +++..+++.+++.+++.++..+++
T Consensus 331 ~~~~g~~~g~~~~g~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~ 374 (375)
T TIGR00899 331 TGRVGWIIAGSVGGILAERW--SYHAVYWFAIVMLIVALFCLLLIK 374 (375)
T ss_pred HHHHHHHHHHHHHHHHHHhc--cchhHHHHHHHHHHHHHHHHheec
Confidence 99999999999999998877 888899998888888877766654
No 44
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.82 E-value=8.1e-19 Score=154.01 Aligned_cols=274 Identities=15% Similarity=0.189 Sum_probs=199.6
Q ss_pred CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCch---hHHHHHH
Q 045073 2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYL---WRIVLMF 78 (402)
Q Consensus 2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---Wr~~f~~ 78 (402)
+.++..++++++|++++|.++|+.. ..++|..+...++-.+. ...+ ||....+
T Consensus 122 Fav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~-----------------------~~~g~~~w~~~~~i 177 (417)
T COG2223 122 FAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVA-----------------------VAFGFLAWRNVAGI 177 (417)
T ss_pred ehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHH-----------------------HHHhhHHHHHHHHH
Confidence 5678899999999999999999999 88999999999988887 3445 9999988
Q ss_pred hHHHHHH-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHH
Q 045073 79 GAVPAAL-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLG 157 (402)
Q Consensus 79 ~~i~~~~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (402)
-.++.++ .+..++.+.|.|.. ....++.+. ..++....+ +..+.
T Consensus 178 ~~~~l~v~~v~~~~~~~d~p~~--r~~~~~~~~------------------------------~~~~~v~~~---~~~W~ 222 (417)
T COG2223 178 YVVALAIAAVLAWLGMNDVPEH--RASVKPQLP------------------------------AQLKAVFSN---KDTWL 222 (417)
T ss_pred HHHHHHHHHHHHHHHhCCChhh--hccccccch------------------------------hHHHHHhcC---cchHH
Confidence 7766666 44555567777754 111111100 000111112 25677
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHH
Q 045073 158 TTSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGG 236 (402)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~ 236 (402)
+++.++....++-++..++|.++++ +|.++.+++. ......+...+...++|+++||+|.+++++..
T Consensus 223 lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~------------~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~ 290 (417)
T COG2223 223 LSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGL------------IAFLFPLIGALARPLGGWLSDRIGGRRVTLAV 290 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHH------------HHHHHHHHHHHHHhccchhhhhccchhHHHHH
Confidence 7777777777888889999999865 8998887665 66667777777888999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHH
Q 045073 237 FLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGIS 316 (402)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~ 316 (402)
+..++++..+.+......... .+.......+.....+.+.+. ...+.++..++|.+ -|.+.|+.
T Consensus 291 f~~~~~~~~~l~~~~~~~~~~--------------~~~~~~~~~~l~l~~~~G~Gn-Gsvfk~Ip~if~~~-~G~v~G~v 354 (417)
T COG2223 291 FVGMALAAALLSLFLTGFGHG--------------GSFVVFVAVFLALFVFAGLGN-GSVFKMIPVIFPKE-TGAVTGIV 354 (417)
T ss_pred HHHHHHHHHHHHccccccccC--------------cchHHHHHHHHHHHHHhccCc-chheeechHHHHhh-hhHHHHHH
Confidence 888888877776643211111 223333333333333434443 36777888888864 58888999
Q ss_pred HHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073 317 AAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 317 ~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 363 (402)
..++.+|++.-|...+...+.++ .+...|+++..+.+++.++.+.+
T Consensus 355 ga~G~lGGf~lp~~~g~~~~~tg-~~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 355 GAIGGLGGFFLPLAFGVSLDLTG-SYTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred HHhccccccchhHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999885 58889999999999888877755
No 45
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.82 E-value=3e-18 Score=155.96 Aligned_cols=245 Identities=20% Similarity=0.299 Sum_probs=187.8
Q ss_pred CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073 2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV 81 (402)
Q Consensus 2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i 81 (402)
++...+++.|++|+++|++.+++...+..+|..+++.+++.+. +..+||+.+++.++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~ 161 (352)
T cd06174 105 YPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLA-----------------------ESLGWRWLFLILAI 161 (352)
T ss_pred cHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHH-----------------------HHhhHHHHHHHHHH
Confidence 3566789999999999999999999999999999999999886 44679999999777
Q ss_pred HHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073 82 PAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST 161 (402)
Q Consensus 82 ~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (402)
..++..+...+++ +.++.....
T Consensus 162 ~~~~~~~~~~~~~----------------------------------------------------------~~~~~~~~~ 183 (352)
T cd06174 162 LGLLLALLLLFLL----------------------------------------------------------RLLLLLALA 183 (352)
T ss_pred HHHHHHHHHHHHH----------------------------------------------------------HHHHHHHHH
Confidence 7666555543332 023333344
Q ss_pred HHHHHHHHHHHHhhhhhhhhhc-CcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhH-HHHHHHHH
Q 045073 162 WFLLDIAFYTINLAQKDIYPAT-GIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFI-IQLGGFLL 239 (402)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~-~~~~~~~~ 239 (402)
.+...........+.|.+.++. +.+..+.+. ......++.+++.++.+++.||+|||+ .+..+..+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (352)
T cd06174 184 FFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGL------------LLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLL 251 (352)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 4444555666677778887764 777766554 777788889999999999999999999 88888877
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073 240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA 319 (402)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 319 (402)
..++.+..... .+ .....+.....+.......+...++..|..|++.|++..|+.+..
T Consensus 252 ~~i~~~~~~~~---------------------~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (352)
T cd06174 252 AALGLLLLALA---------------------PS-LALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTF 309 (352)
T ss_pred HHHHHHHHHHh---------------------cc-HHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHH
Confidence 77776666543 22 223333333344444556677888999999999999999999999
Q ss_pred HHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073 320 GKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 320 ~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 363 (402)
..++..+++.+.+.+.+.. +++..+.+.+++.+++.++.+++
T Consensus 310 ~~~~~~i~~~i~g~l~~~~--~~~~~~~~~~~~~~i~~i~~~~~ 351 (352)
T cd06174 310 GSLGGALGPLLAGLLLDTG--GYGGVFLILAALALLAALLLLLL 351 (352)
T ss_pred HHHHHHHHHHHHHHHhccc--CcchHHHHHHHHHHHHHHHheec
Confidence 9999999999999998766 88899999999888887776543
No 46
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.81 E-value=4.6e-18 Score=155.74 Aligned_cols=250 Identities=10% Similarity=0.044 Sum_probs=161.5
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
+...+++.|++|+++|+++.++.+.+..+|.++++.+++.+. +..+||+.|++.++.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~-----------------------~~~g~~~~~~~~~~~ 167 (365)
T TIGR00900 111 PAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMY-----------------------ATLGIKWAIWVDAVG 167 (365)
T ss_pred HHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-----------------------HHhhHHHHHHHHHHH
Confidence 456788999999999999999999999999999999999886 557899999987766
Q ss_pred HHHHHHHHhh--ccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073 83 AALTYYWRMK--MPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS 160 (402)
Q Consensus 83 ~~~~~~~~~~--~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (402)
.++..+..++ .||.++. .+++.+++..++. .+.++ ..+++ +.+.....
T Consensus 168 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-------------------------~~~~~-~~~~~--~~~~~~~~ 217 (365)
T TIGR00900 168 FAISALLIVSVRIPELAAS--EIQALSNAVLRDT-------------------------REGIK-FVLKN--PLLRTLLL 217 (365)
T ss_pred HHHHHHHHHhcccccCCCc--cccccchhHHHHH-------------------------HhHHH-HHHcC--cHHHHHHH
Confidence 6655444333 3433221 0000000000000 00001 11111 12222222
Q ss_pred HHHHHHHHHHHHH-hhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHH
Q 045073 161 TWFLLDIAFYTIN-LAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFL 238 (402)
Q Consensus 161 ~~~~~~~~~~~~~-~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~ 238 (402)
..+......+... .+.|.+.++ .|.+..+.+. ......++.+++.++.+++.||++||+.+..+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 285 (365)
T TIGR00900 218 LALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGW------------VLAAFGLGALLGALLLGLLGRYFKRMALMTGAIF 285 (365)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHH
Confidence 2233333333333 566777765 6777766544 6666778888899999999999999998887766
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHH
Q 045073 239 LMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAA 318 (402)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~ 318 (402)
+.+++...+... ..+.....+..+..++......+...++..|..|++.|+++.|+.+.
T Consensus 286 ~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 344 (365)
T TIGR00900 286 VIGLAILVVGLT---------------------PPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFS 344 (365)
T ss_pred HHHHHHHHHHhh---------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 666555544432 11122222223333333334455677888999999999999999999
Q ss_pred HHHHhHHHHhHhHHhhhhcc
Q 045073 319 AGKAGAIVGAFGVQYYTQKG 338 (402)
Q Consensus 319 ~~~~g~~i~~~~~~~~~~~~ 338 (402)
...++..+++.+.+.+.+..
T Consensus 345 ~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 345 LSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999988753
No 47
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.81 E-value=4e-18 Score=158.73 Aligned_cols=272 Identities=12% Similarity=0.034 Sum_probs=167.3
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
+....++.|..|+++|+++.++...+..+|.++++.+++.+. +..+||+.|++.++.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~-----------------------~~~~~~~~~~~~~~~ 181 (408)
T PRK09874 125 PNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLA-----------------------DSYGLRPVFFITASV 181 (408)
T ss_pred HhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------HHhCHHHHHHHHHHH
Confidence 344567889999999999999999999999999999998886 556899999987766
Q ss_pred HHHHHH-HHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073 83 AALTYY-WRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST 161 (402)
Q Consensus 83 ~~~~~~-~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (402)
.++..+ ..+++||.++. . +++++...++. .....++ +........
T Consensus 182 ~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~-----------------------------~~~~~~~--~~~~~~~~~ 227 (408)
T PRK09874 182 LFLCFLVTLFCIRENFQP--V-SKKEMLHMREV-----------------------------VTSLKNP--KLVLSLFVT 227 (408)
T ss_pred HHHHHHHHHHHhccCccc--c-cchhhhHHHHH-----------------------------HHhCcCC--chHHHHHHH
Confidence 655443 44556765422 0 11000000000 0000011 011111111
Q ss_pred HHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHH
Q 045073 162 WFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMS 241 (402)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~ 241 (402)
.+...........+.+.+..+.+.+..+... ..........++.+++.+..|+++||+|||+.+..+..+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~ 299 (408)
T PRK09874 228 TLIIQVATGSIAPILTLYVRELAGNVSNIAF--------ISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSV 299 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHH
Confidence 1111122223333445555543322221111 11223444566777788889999999999999888776655
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHH
Q 045073 242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGK 321 (402)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 321 (402)
++.+..... .+. ....+.....+.+.....+...++..+..|++.|++..++.+....
T Consensus 300 ~~~~~~~~~---------------------~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 357 (408)
T PRK09874 300 LLLIPMSFV---------------------QTP-LQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRD 357 (408)
T ss_pred HHHHHHHHh---------------------ccH-HHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHH
Confidence 544433321 111 2222222222333333445555666788899999999999999999
Q ss_pred HhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073 322 AGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 322 ~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 363 (402)
+|..++|.+.+.+.+.. +++..|.+.+++.+++.+..++.
T Consensus 358 ~g~~~gp~~~G~l~~~~--g~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 358 IGNVTGPLMGAAISANY--GFRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred HHHHhhHHHHHHHHhhc--chhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998877 88999999988888877766543
No 48
>PRK12382 putative transporter; Provisional
Probab=99.81 E-value=5.8e-18 Score=156.67 Aligned_cols=257 Identities=12% Similarity=0.012 Sum_probs=164.6
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
+...+++.|+.|+++|++++++.+.+..+|.++++.+++.+. ...|||+.+.+..+.
T Consensus 131 ~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~-----------------------~~~g~~~~~~~~~~~ 187 (392)
T PRK12382 131 TGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLH-----------------------SHFGFAALALTTMVL 187 (392)
T ss_pred HHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHH-----------------------hccChHHHHHHHHHH
Confidence 344567889999999999999999999999999999998876 557899887765554
Q ss_pred HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073 83 AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW 162 (402)
Q Consensus 83 ~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (402)
.++.+......||.+.. ++++ .+. ++ ..+..++.... .
T Consensus 188 ~~~~~~~~~~~~~~~~~----~~~~-----------------------------~~~----~~-~~~~~~~~~~~----~ 225 (392)
T PRK12382 188 PLLAWAFNGTVRKVPAH----AGER-----------------------------PSL----WS-VVGLIWKPGLG----L 225 (392)
T ss_pred HHHHHHHHHhccCCCCC----cccC-----------------------------chH----HH-HHHHHHHhHHH----H
Confidence 44433332233432210 0000 000 00 01111111111 1
Q ss_pred HHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHH
Q 045073 163 FLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSI 242 (402)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~ 242 (402)
............+.|.++++.+++.. +. ......++.+++.++.|++.||+|+|+.+..+..+.++
T Consensus 226 ~l~~~~~~~~~~~~~~~~~~~~~~~~--~~------------~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~ 291 (392)
T PRK12382 226 ALQGVGFAVIGTFVSLYFASKGWAMA--GF------------TLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETV 291 (392)
T ss_pred HHHHHHHhHHHHHHHHHHHhcCCchh--HH------------HHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHH
Confidence 11222333445566666666665432 11 33345566778888999999999999988888777666
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHH
Q 045073 243 CMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKA 322 (402)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 322 (402)
+.+++... .+.+.... .....+.......+...+...|.+|++.|+++.|+.+....+
T Consensus 292 ~~~~~~~~---------------------~~~~~~~~-~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~ 349 (392)
T PRK12382 292 GLLLLWLA---------------------PTAWVALA-GAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDI 349 (392)
T ss_pred HHHHHHHc---------------------ccHHHHHH-HHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 65544431 12222222 222222222233345556678889999999999999999999
Q ss_pred hHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheee
Q 045073 323 GAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM 362 (402)
Q Consensus 323 g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~ 362 (402)
|..++|.+.+.+.+.. +|+..|.+.+++.+++.++.++
T Consensus 350 g~~ig~~~~g~l~~~~--g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 350 AYGVSGPLAGMLATSF--GYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHHHHHHHh--CchHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999887 8999999988888877766553
No 49
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.80 E-value=3.4e-19 Score=165.10 Aligned_cols=194 Identities=14% Similarity=0.186 Sum_probs=134.1
Q ss_pred CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073 2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV 81 (402)
Q Consensus 2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i 81 (402)
||....+++-|+.+++||+.++++.++.++|.++|+++++.+.+..+. ....||||.|++.++
T Consensus 152 wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~-----------------~~~~gW~~~FiI~G~ 214 (495)
T KOG2533|consen 152 WPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGS-----------------GGLAGWRWLFIIEGV 214 (495)
T ss_pred chHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCC-----------------CCcCCceeehhHHHH
Confidence 688899999999999999999999999999999999999997642221 256899999999665
Q ss_pred HHHH-HHHHHhhccCCch--hHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHH
Q 045073 82 PAAL-TYYWRMKMPETAR--YTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGT 158 (402)
Q Consensus 82 ~~~~-~~~~~~~~pesp~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (402)
+.++ +++.++++|+.|. +... +++++-..+++++..+ +. ..++..+..+++..+. ..++..
T Consensus 215 i~~~~gi~~f~~lp~~P~~~~fl~-~~ek~~~~~~~~~~~~---~~---------~~~~~~~~~~~~a~~d---p~vw~~ 278 (495)
T KOG2533|consen 215 ITLVLGIVVFFFLPDNPSKAWFLT-DEEKELVVERLRESPS---GG---------IENKFKWKGFKEALKD---PGVWPF 278 (495)
T ss_pred HHHHHHheEEEEecCChhhccccc-hHHHHHHHHHHHhccC---CC---------cccccCHHHHHHHHhc---hhHHHH
Confidence 5554 6666777999997 3211 1111101111111000 00 0000111222222222 267888
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhc----cchhHHH
Q 045073 159 TSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDR----IGRFIIQ 233 (402)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr----~grr~~~ 233 (402)
++..++.....++...|+|.++++ .|++..+++. +.++..++.+++.+++|+++|| ..+|...
T Consensus 279 ~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~------------ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~ 346 (495)
T KOG2533|consen 279 SLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANL------------LSTPYDVGGIVGLILAGYLSDRLKTIFARRLLF 346 (495)
T ss_pred HHHHHHHhhccccHHHHHHHHHHcCCCcChHHhcc------------ccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 888888889999999999999988 5688877665 8888999999999999999999 5566555
Q ss_pred HHHHHHH
Q 045073 234 LGGFLLM 240 (402)
Q Consensus 234 ~~~~~~~ 240 (402)
.....+.
T Consensus 347 ~~~~~~~ 353 (495)
T KOG2533|consen 347 IVFLCLY 353 (495)
T ss_pred HHHHHHH
Confidence 5544433
No 50
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.80 E-value=1.5e-17 Score=154.22 Aligned_cols=272 Identities=9% Similarity=-0.023 Sum_probs=161.8
Q ss_pred chhhhhhccCcccchhHHHHHHHHHHHHH-HHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHH
Q 045073 5 SAVIMSEYANKRTRGAFIAAVFAMQGMGI-LFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPA 83 (402)
Q Consensus 5 ~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~ 83 (402)
..+++.|+.|+++|++++++.+.+.++|. ++++.+++.+. +..||+..++......
T Consensus 126 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~-----------------------~~~g~~~~~~~~~~~~ 182 (402)
T TIGR00897 126 FLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAI-----------------------PAFGEMNTLWSALAFV 182 (402)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------------------cccchHHHHHHHHHHH
Confidence 44667899999999999999999999997 57888887765 4456554444322222
Q ss_pred HH-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073 84 AL-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW 162 (402)
Q Consensus 84 ~~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (402)
++ .++..++.+|.++. .+++++++ .+ +..+.++ ...++ +.++...+..
T Consensus 183 ~~~~~~~~~~~~~~~~~--~~~~~~~~-~~-------------------------~~~~~~~-~~~~~--~~~~~~~~~~ 231 (402)
T TIGR00897 183 LTGGVIALFSNKDIFTP--QHMQTREK-FS-------------------------ELGKAAT-ILFTN--PNVLLGGMVR 231 (402)
T ss_pred HHHHHHHHhccCCCCCc--ccccCCcc-hh-------------------------hHHHHHH-HHHcC--hhHHHHHHHH
Confidence 22 22223334443210 00000000 00 0000001 11111 2344444445
Q ss_pred HHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHH-HHHHHHH
Q 045073 163 FLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQL-GGFLLMS 241 (402)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~-~~~~~~~ 241 (402)
++.....++...+.|.+.++.|++..+.+. ......++.+++.++.|+++||++||+.+. .+.+..+
T Consensus 232 ~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~------------~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~ 299 (402)
T TIGR00897 232 IINTIGLFGFAVFLPMFVAELGFSTSEWLQ------------IWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCG 299 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhHHHH------------HHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Confidence 555667778888999999888888776443 555667788899999999999999887654 2323333
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHH
Q 045073 242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGK 321 (402)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 321 (402)
++.+.+....... .+......+..+..+....+..+ ......|..| +.|+++.|+.+....
T Consensus 300 ~~~~~l~~~~~~~-----------------~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~ 360 (402)
T TIGR00897 300 IFTLALYYIPQHF-----------------GHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAG 360 (402)
T ss_pred HHHHHHHHHHHcc-----------------CCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHH
Confidence 3322222211100 11112222222222222222222 2344567655 589999999999999
Q ss_pred HhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073 322 AGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 322 ~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 363 (402)
+++.++|.+.+.+.+.. ++..++++.+++.+++.++..++
T Consensus 361 lg~~~gp~i~g~l~~~~--g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 361 LSAFLAPAIAVLFIGFF--GAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHHHHHhhc--chHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999987 88889998888888777666554
No 51
>PRK10504 putative transporter; Provisional
Probab=99.80 E-value=1.3e-17 Score=158.12 Aligned_cols=276 Identities=11% Similarity=0.061 Sum_probs=160.1
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
|...+++.|++|+++|+++.++......+|..+++.+++.+. +..+||+.|++..+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~-----------------------~~~gw~~~f~~~~~~ 173 (471)
T PRK10504 117 PVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLV-----------------------EYASWHWIFLINIPV 173 (471)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-----------------------hhccHHHHHHHHHHH
Confidence 456678899999999999999999999999999999999887 567899999987766
Q ss_pred HHHHHHHH-hhccCCchhHHhhhCChhHHHHHH------HHhccccccccccCCCC----------------CCCCCccc
Q 045073 83 AALTYYWR-MKMPETARYTALVEGNQKKAAVDM------AKVLDTDLTVATSAYPV----------------PVSPEAST 139 (402)
Q Consensus 83 ~~~~~~~~-~~~pesp~~l~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~----------------~~~~~~~~ 139 (402)
.++..+.. ...|+.+.- ..+.+...... .-....+..+....... ..+++...
T Consensus 174 ~~l~~~~~~~~~~~~~~~----~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (471)
T PRK10504 174 GIIGAIATLMLMPNYTMQ----TRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNN 249 (471)
T ss_pred HHHHHHHHHHhCCCcccc----CCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 65544433 345554311 11111100000 00000000000000000 00000000
Q ss_pred cccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhh
Q 045073 140 YGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYW 218 (402)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 218 (402)
.+.+..+.++++ .+.......+...........+.|.+++. .|.++...+. ......++.+++.+
T Consensus 250 ~~~~~~~l~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~------------~~~~~~~~~~~~~~ 315 (471)
T PRK10504 250 RALFSLKLFRTR--TFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGL------------MMIPMVLGSMGMKR 315 (471)
T ss_pred CCccCHHHhccc--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHH
Confidence 011111122221 22222333333333444455567777764 7887765544 55666777777778
Q ss_pred hHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccc
Q 045073 219 FTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFI 298 (402)
Q Consensus 219 ~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (402)
+.+++.||+|||+++..+..+.++...++..... ........+.....+.......+....
T Consensus 316 ~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~ 376 (471)
T PRK10504 316 IVVQVVNRFGYRRVLVATTLGLALVSLLFMLVAL-------------------LGWYYLLPFVLFLQGMVNSTRFSSMNT 376 (471)
T ss_pred HHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccc-------------------cccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999998887766666554443210 111121111122221222222334556
Q ss_pred ccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhcc
Q 045073 299 VPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKG 338 (402)
Q Consensus 299 ~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~ 338 (402)
+..+..|++.|+++.|+.++...+|..+|+.+.+.+.+..
T Consensus 377 ~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~ 416 (471)
T PRK10504 377 LTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLF 416 (471)
T ss_pred HHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6778899999999999999999999999999988887655
No 52
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.79 E-value=2.4e-18 Score=158.33 Aligned_cols=274 Identities=13% Similarity=0.168 Sum_probs=161.2
Q ss_pred CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHH-HHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhH
Q 045073 2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAG-VISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGA 80 (402)
Q Consensus 2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~ 80 (402)
++...+++.|++|+++|++++++.+.+..+|..+++ .++..+. ...+||+.|++.+
T Consensus 101 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~ 157 (379)
T TIGR00881 101 WPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIA-----------------------ELYSWHWVFIVPG 157 (379)
T ss_pred CCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHH-----------------------hcCCchhHHHHHH
Confidence 466788999999999999999999999999999999 4665554 5578999998866
Q ss_pred HHHHH-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHH
Q 045073 81 VPAAL-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTT 159 (402)
Q Consensus 81 i~~~~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (402)
+..++ .++..+++||+|+... .++.++. ..++.++.++.++++...++...+...++ +.++...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 222 (379)
T TIGR00881 158 IIAIIVSLICFLLLRDSPQSCG--LPPAEEM-----------PNEEPDGDAEKKEEELTKKQIFLQYVLLN--KVLWYIS 222 (379)
T ss_pred HHHHHHHHHHheeeCCCccccc--cCccccC-----------cccccccccccccccccchHHHHHHHHhc--chHHHHH
Confidence 65554 4455556788765311 0000000 00000000000000011111111111121 2344444
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccch-hHHHHHHH
Q 045073 160 STWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGR-FIIQLGGF 237 (402)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~gr-r~~~~~~~ 237 (402)
+..+......+....+.|.++.+ .|++..+.+. ......++.+++.++.+++.||..+ |+.... .
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------------~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~-~ 289 (379)
T TIGR00881 223 LGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASW------------AFTLYELGGLVGTLLAGWLSDKLFNGRRGPLA-V 289 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH------------HHHHHHHHcchhHHHHHHHHHHHcCCcchHHH-H
Confidence 44444455556667778887754 6887776554 6667778889999999999998643 332221 1
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHH
Q 045073 238 LLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISA 317 (402)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~ 317 (402)
.........+.... .... .+ .....+.....+....+..+....+..|.+|++.|+++.|+.+
T Consensus 290 ~~~~~~~~~~~~~~--~~~~--------------~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 352 (379)
T TIGR00881 290 FFMALIIVSLLVYW--LNPA--------------AN-PLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVG 352 (379)
T ss_pred HHHHHHHHHHHHHh--cCcc--------------hh-HHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHH
Confidence 11111111111111 0000 11 1222222222232233444455667899999999999999999
Q ss_pred HHHHHhHHHHhHhHHhhhhccCCcchhh
Q 045073 318 AAGKAGAIVGAFGVQYYTQKGDKQIKQS 345 (402)
Q Consensus 318 ~~~~~g~~i~~~~~~~~~~~~~~~~~~~ 345 (402)
....+|+.++|.+.+.+.+.. +|+..
T Consensus 353 ~~~~~g~~~~~~~~g~l~~~~--g~~~~ 378 (379)
T TIGR00881 353 FFAYLGGILAGLPLGYLADGF--GWAGA 378 (379)
T ss_pred HhhhhhhhhhhhhHHHHHHhh--ccccc
Confidence 999999999999999999877 66543
No 53
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.79 E-value=2.2e-17 Score=152.12 Aligned_cols=260 Identities=12% Similarity=0.101 Sum_probs=158.0
Q ss_pred cchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHH
Q 045073 4 LSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPA 83 (402)
Q Consensus 4 ~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~ 83 (402)
...+++.|++|+++|++++++...+..+|..+++.+++.+. +..+||+.|++.++..
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~-----------------------~~~gwr~~f~~~~~~~ 167 (382)
T PRK10091 111 VGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLS-----------------------QEFSWRYTFLLIAVFN 167 (382)
T ss_pred HHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHh-----------------------hhccHHHHHHHHHHHH
Confidence 34567889999999999999999999999999999988876 5578999999977665
Q ss_pred HHHH-HHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073 84 ALTY-YWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW 162 (402)
Q Consensus 84 ~~~~-~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (402)
++.. ...+++||.++- ++.+.+ + . .+ ..++. ..+......
T Consensus 168 ~~~~~~~~~~lp~~~~~----~~~~~~--~--------------------------~----~~-~~~~~--~~~~~~~~~ 208 (382)
T PRK10091 168 IAVLASIYFWVPDIRDE----AKGGLR--E--------------------------Q----FH-FLRSP--APWLIFAAT 208 (382)
T ss_pred HHHHHHHHHhCCCCCcc----cccCHH--H--------------------------H----HH-HhcCh--HHHHHHHHH
Confidence 5543 344557875421 100000 0 0 01 11111 112222222
Q ss_pred HHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHH
Q 045073 163 FLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMS 241 (402)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~ 241 (402)
+......+....+.+.++. ..|+++.+.+. ......++.+++.++.+++.||+|+|+.+..+..+.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~------------~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~ 276 (382)
T PRK10091 209 MFGNAGVFAWFSYIKPYMMFISGFSETSMTF------------IMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIV 276 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHH
Confidence 2222233333334444444 47888776554 6777788899999999999999999998888777666
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcc-ccccccccccccchhhhhhhHHHHHH
Q 045073 242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNS-TTFIVPAELFPARLRSTCHGISAAAG 320 (402)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~p~~~r~~~~~~~~~~~ 320 (402)
++.+++.... ...+.......+. ..+..+..+ .......+..|.+.++.+ ..+...
T Consensus 277 i~~~~~~~~~--------------------~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 333 (382)
T PRK10091 277 LALLMLFFFG--------------------GMKTASLIFAFIC-CAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAF 333 (382)
T ss_pred HHHHHHHHHH--------------------hhHHHHHHHHHHH-HHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHH
Confidence 6654443321 1111222211111 111112222 222233454555555554 346678
Q ss_pred HHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee
Q 045073 321 KAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF 361 (402)
Q Consensus 321 ~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~ 361 (402)
.+|..+||.+.+.+.+... ++...+.+.++++++......
T Consensus 334 ~~g~~~Gp~~~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~ 373 (382)
T PRK10091 334 NLGSAIGAYCGGMMLTLGL-AYNYVALPAALLSFAAMSSLL 373 (382)
T ss_pred HHHHHHHHHHhHHHHHccc-CcchHHHHHHHHHHHHHHHHH
Confidence 8999999999999998643 788888877766665554444
No 54
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.79 E-value=5.4e-17 Score=149.90 Aligned_cols=255 Identities=13% Similarity=0.111 Sum_probs=155.8
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
|...+++.|++|+++|+++.++...+.++|.++++.+++.+. +..+||+.|++.++.
T Consensus 127 ~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~-----------------------~~~gw~~~f~~~~~l 183 (394)
T PRK10213 127 AMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLG-----------------------ELIGWRNVFNAAAVM 183 (394)
T ss_pred HHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------hhcCHHHHHHHHHHH
Confidence 456788999999999999999999999999999999999886 567899999987666
Q ss_pred HHHHHHH-HhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073 83 AALTYYW-RMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST 161 (402)
Q Consensus 83 ~~~~~~~-~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (402)
+++..+. ...+||+|+. ++...+ .. ++..+++ .++.....
T Consensus 184 ~~~~~l~~~~~~p~~~~~----~~~~~~----------------------------~~----~~~l~~~---~~~~~~~~ 224 (394)
T PRK10213 184 GVLCIFWIIKSLPSLPGE----PSHQKQ----------------------------NT----FRLLQRP---GVMAGMIA 224 (394)
T ss_pred HHHHHHHHHHHCCCCCcc----cccchh----------------------------HH----HHHhcCH---HHHHHHHH
Confidence 6554433 3346775421 000000 00 1111111 22222222
Q ss_pred HHHHHHHHHHHHhhh-hhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073 162 WFLLDIAFYTINLAQ-KDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240 (402)
Q Consensus 162 ~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~ 240 (402)
.+......+....+. |.+.++.|++....+. ......++.+++.++.+++.||.+++.... +..+.
T Consensus 225 ~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~------------~~~~~~~~~iig~~~~~~l~~r~~~~~l~~-~~~~~ 291 (394)
T PRK10213 225 IFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTL------------VLLSFGIASFVGTSLSSFILKRSVKLALAG-APLVL 291 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChhHHHH------------HHHHHHHHHHHHHHHHHHHHhccchhHHHH-HHHHH
Confidence 222223334444444 6677778888776554 566677788889999999999965443333 33332
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG 320 (402)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~ 320 (402)
..+..++.... .+. ..+....+..++......+...+++.+..| +.++...++.....
T Consensus 292 ~~~~~~l~~~~--------------------~~~-~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 349 (394)
T PRK10213 292 AVSALVLTLWG--------------------SDK-IVATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVI 349 (394)
T ss_pred HHHHHHHHHHh--------------------hhH-HHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHH
Confidence 22222222211 111 222222222232233333444446677777 44567777777888
Q ss_pred HHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHH
Q 045073 321 KAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLG 356 (402)
Q Consensus 321 ~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 356 (402)
.+|..+|+.+.+.+.+.. ++...+...+++.++.
T Consensus 350 ~lg~~~G~~l~G~l~~~~--g~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 350 QLANTCGAAIGGYALDNI--GLTSPLMLSGTLMLLT 383 (394)
T ss_pred HHHHHHHHHHHHHHHhcc--ChhhHHHHHHHHHHHH
Confidence 899999999999999976 7777666665554443
No 55
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.79 E-value=6e-17 Score=150.32 Aligned_cols=272 Identities=13% Similarity=0.057 Sum_probs=159.9
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCC-CchhHHHHHHhHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQG-DYLWRIVLMFGAV 81 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Wr~~f~~~~i 81 (402)
|...+++.|+.|+++|+++.++...+..+|.++++.++..+. + ..|||..|++.++
T Consensus 113 ~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~-----------------------~~~~gw~~~f~i~a~ 169 (402)
T PRK11902 113 IVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLA-----------------------DRVLGWGNTYLLMAG 169 (402)
T ss_pred HHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHH-----------------------hcccCHHHHHHHHHH
Confidence 345678899999999999999999999999999999988876 3 3589999999777
Q ss_pred HHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhh-hHHHHHHHH
Q 045073 82 PAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKH-GLHLLGTTS 160 (402)
Q Consensus 82 ~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 160 (402)
..++..+..+++||+++. ++++++..++. .+.++ ..++++ .+..+...+
T Consensus 170 ~~l~~~l~~~~~~e~~~~----~~~~~~~~~~~-------------------------~~~~~-~l~~~~~~~~~l~~~~ 219 (402)
T PRK11902 170 LMLAGALTTLWAPEPEVP----ARPPRSLGEAV-------------------------VGPLR-DFFSRRGAWALLLLIV 219 (402)
T ss_pred HHHHHHHHHHhcCCCccc----ccccchhHHHH-------------------------HHHHH-HHHhCcCHHHHHHHHH
Confidence 666655555667886543 11111000000 00011 122221 111222222
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHH-HHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073 161 TWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMF-LVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL 239 (402)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~ 239 (402)
.........+ ....+.+.++.|+++.+.+. .. ....++.+++.++++++.||+|||+.+..+..+
T Consensus 220 l~~~~~~~~~--~~~~~~l~~~~G~~~~~~g~------------~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~ 285 (402)
T PRK11902 220 LYKLGDAFAG--SLSTTFLIRGAGFSAGEVGI------------VNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVL 285 (402)
T ss_pred HHHhHHHHHH--HHHHHHHHHhcCCCHHHHHH------------HHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 2111111111 12223344557888776443 33 333456788889999999999999887766655
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHH---HHHHHHhhCCccccccccccccccchhhhhhhHH
Q 045073 240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYG---LTLFFANFGPNSTTFIVPAELFPARLRSTCHGIS 316 (402)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~ 316 (402)
..+..+.+...... . .+.+....... +..+.......+....++.+.+|.+.+ ++.
T Consensus 286 ~~l~~l~~~~~~~~-~----------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~ 344 (402)
T PRK11902 286 QAVSNLGYWVLAVT-P----------------KHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQY----ALL 344 (402)
T ss_pred HHHHHHHHHHHHhc-C----------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHH
Confidence 55444333221110 0 11122222111 122222233344556667777775554 455
Q ss_pred HHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeee
Q 045073 317 AAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVP 364 (402)
Q Consensus 317 ~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~ 364 (402)
+....++..+++.+.+.+.+.. |++..|.+.+++++++.++.+..+
T Consensus 345 ~~~~~l~~~~~~~~~G~l~~~~--G~~~~f~~~~~~~~~~~~~~~~~~ 390 (402)
T PRK11902 345 SALASVGRVYVGPTSGYLVEAY--GWPGFYLMTVVIALPGLALLWLMR 390 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh--ChHHHHHHHHHHHHHHHHHHHHHh
Confidence 5555667766666888888888 899999999888888877765443
No 56
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.77 E-value=3.6e-17 Score=149.41 Aligned_cols=252 Identities=10% Similarity=0.004 Sum_probs=152.7
Q ss_pred cchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHH
Q 045073 4 LSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPA 83 (402)
Q Consensus 4 ~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~ 83 (402)
...+++.|++|+++|+++.++...+..+|.++++.+++.+....+.+ ....++||..|++.++..
T Consensus 103 ~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~---------------~~~~~~wr~~f~i~ai~~ 167 (356)
T TIGR00901 103 ALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFAN---------------TGLITLWGYIFFWTALLI 167 (356)
T ss_pred HHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccc---------------cccccccHHHHHHHHHHH
Confidence 44678999999999999999999999999999999998886432211 113566999999988877
Q ss_pred HHHHHHHhh-ccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073 84 ALTYYWRMK-MPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW 162 (402)
Q Consensus 84 ~~~~~~~~~-~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (402)
++.++..++ .||+++. ++.+++..++. ++.++....++..+.++...+..
T Consensus 168 l~~~~~~~~~~~e~~~~----~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~ 218 (356)
T TIGR00901 168 LPGLLVTLFLAKEPQED----ASVPKPLTQAV-------------------------LKPIREFFQRKNMIQALLLLLLI 218 (356)
T ss_pred HHHHHHHHHhccCCCcc----cccchhHHHHH-------------------------HHHHHHHHHhcCchHHHHHHHHH
Confidence 776655544 5775321 00000000000 00011111111111233333344
Q ss_pred HHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHH
Q 045073 163 FLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSI 242 (402)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~ 242 (402)
+.....++....+.|.+.++.|+++.+.+. .......++.+++.++++++.||+|||+.+..+.++.++
T Consensus 219 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~-----------~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~ 287 (356)
T TIGR00901 219 VLYKLGDSAATVLTTLFLLDMGFSKEEIAL-----------VAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQAL 287 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-----------HhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 444556667777888888888888876443 122333456778889999999999999988888777666
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHH
Q 045073 243 CMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGK 321 (402)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 321 (402)
...+..+........+ + +....+......+...+......+...++..|.+|++.||+..|+.+...+
T Consensus 288 ~~~~~~~~~~~~~~~~----------~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 288 TNAGFVWLASNGHHDG----------I-TFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHhcCcccc----------c-ccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 5554443211000000 0 001222222223232333334455678889999999999999999877653
No 57
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.76 E-value=8.7e-17 Score=152.97 Aligned_cols=271 Identities=13% Similarity=0.083 Sum_probs=165.0
Q ss_pred hhhhhhc-cCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHH
Q 045073 6 AVIMSEY-ANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAA 84 (402)
Q Consensus 6 ~~~i~e~-~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~ 84 (402)
...+.+. .|+++|++++++......+|..++|.+++.+. +..+||+.|++....++
T Consensus 116 ~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~-----------------------~~~gwr~~f~i~~~~~~ 172 (495)
T PRK14995 116 LAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILL-----------------------EHFYWGSVFLINVPIVL 172 (495)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----------------------ccCChHHHHHHHHHHHH
Confidence 3445555 47899999999999999999999999999987 66899999999776666
Q ss_pred HHH-HHHhhccCCchhHHhhhCChhHHHHHHHH-------hccccccccccCCCC-----------------CCCCCccc
Q 045073 85 LTY-YWRMKMPETARYTALVEGNQKKAAVDMAK-------VLDTDLTVATSAYPV-----------------PVSPEAST 139 (402)
Q Consensus 85 ~~~-~~~~~~pesp~~l~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-----------------~~~~~~~~ 139 (402)
+.+ +..+++||+|.. ++++.+....+.. ....+.. ....... ...+.+..
T Consensus 173 ~~~~l~~~~l~~~~~~----~~~~~d~~g~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~ 247 (495)
T PRK14995 173 VVMGLTARYVPRQAGR----RDQPLNLGHALMLIVAILLLVYSAKTA-LKGFLSLWVTSLTLLTGALLLGLFIRTQLAAS 247 (495)
T ss_pred HHHHHHHHhCCCCCCC----CCCCCChHhHHHHHHHHHHHHHHHHhc-cccCCchHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 543 444567886532 1111111111000 0000000 0000000 00000000
Q ss_pred cccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhh
Q 045073 140 YGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYW 218 (402)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 218 (402)
...+..+.+++ +.+.......+......++...+.|.+++. .|+++.+++. ......++..++.+
T Consensus 248 ~p~~~~~lf~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~------------~~~~~~~~~~~~~~ 313 (495)
T PRK14995 248 RPMIDMRLFTH--RIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGM------------FMLPVMVASGFSGP 313 (495)
T ss_pred CCCcCHHHhCC--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHH
Confidence 11111122222 123333344444455566677788888876 7888887665 77778888889999
Q ss_pred hHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccc
Q 045073 219 FTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFI 298 (402)
Q Consensus 219 ~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (402)
+.|++.||+|+|+.+..+..+.+++.+.+..... . .+.+. .....+..+++.....+....
T Consensus 314 ~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~----~--------------~~~~~-~~~~~~l~G~g~g~~~~~~~~ 374 (495)
T PRK14995 314 IAGILVSRLGLRLVATGGMALSALSFYGLAMTDF----S--------------TQQWQ-AWGLMALLGFSAASALLASTS 374 (495)
T ss_pred HHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcC----C--------------CchHH-HHHHHHHHHHhHHHHHHHHHH
Confidence 9999999999999888887776666554443211 0 11222 222222223222233334555
Q ss_pred ccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhc
Q 045073 299 VPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQK 337 (402)
Q Consensus 299 ~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~ 337 (402)
...+..|++.++.+.++.+....+|+.+|+.+.+.+.+.
T Consensus 375 ~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 375 AIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 667889999999999999999999999999988887653
No 58
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.76 E-value=2.9e-16 Score=145.01 Aligned_cols=247 Identities=13% Similarity=0.090 Sum_probs=152.5
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
+...+++.|++|+++|+++.++.+....+|..+++.+++.+. +..+||+.|++.++.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~-----------------------~~~~~~~~~~~~~~~ 168 (385)
T TIGR00710 112 VISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYIL-----------------------VWLSWHAIFAFLSLA 168 (385)
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------HHcCHHHHHHHHHHH
Confidence 345678999999999999999999999999999999998876 557899999986666
Q ss_pred HHHHH-HHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073 83 AALTY-YWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST 161 (402)
Q Consensus 83 ~~~~~-~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (402)
.++.. +..++.||+++. .++++.++..+ .++...+++ .++...+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-----------------------------~~~~~~~~~---~~~~~~~~ 214 (385)
T TIGR00710 169 GILLSALIFFILPETLPY--EARIQISTYFE-----------------------------TFLLLLKSK---MFWGYALI 214 (385)
T ss_pred HHHHHHHHHHhCCCCCCC--cccCCHHHHHH-----------------------------HHHHHHcCc---hhHHHHHH
Confidence 55543 344457776532 10100000000 001111111 22222222
Q ss_pred HHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073 162 WFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240 (402)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~ 240 (402)
........+....+.|.+++ +.|.++.+.+. ......++.+++.++.+++.||+|||+.+..+..+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~------------~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~ 282 (385)
T TIGR00710 215 YGASFGGFFAFFSGAPFVYIDIMGVSPSVFGL------------LFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILF 282 (385)
T ss_pred HHHHHHHHHHHHHcChHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 22333344555666677765 57887776554 666677888899999999999999999888877666
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG 320 (402)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~ 320 (402)
.++.+++....... ..............+.+.....+.......|..| +.|+++.++.+...
T Consensus 283 ~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~ 344 (385)
T TIGR00710 283 AVSAVLLEITAILG-----------------LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLR 344 (385)
T ss_pred HHHHHHHHHHHHhc-----------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHH
Confidence 66655544432110 1112222222222222233334456667778877 57899999998888
Q ss_pred HHhHHHHhHhHHhhhh
Q 045073 321 KAGAIVGAFGVQYYTQ 336 (402)
Q Consensus 321 ~~g~~i~~~~~~~~~~ 336 (402)
..++.+.+.+.+...+
T Consensus 345 ~~~g~i~~~~~~~~~~ 360 (385)
T TIGR00710 345 LVLGAIVGYLVSLIHG 360 (385)
T ss_pred HHHHHHHHHHHHhccc
Confidence 7655555555554433
No 59
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.76 E-value=3.6e-17 Score=155.86 Aligned_cols=276 Identities=10% Similarity=-0.000 Sum_probs=166.3
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
+...+++.|++|+++|+++.++...+..+|..+++.+++.+. +..+||+.|++.+++
T Consensus 109 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-----------------------~~~~w~~~f~~~~~~ 165 (485)
T TIGR00711 109 PLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWII-----------------------ENYHWRWIFLINVPI 165 (485)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhc-----------------------cCcCceehhhhhhHH
Confidence 456788999999999999999999999999999999998886 668999999997776
Q ss_pred HHHHHH-HHhhccCCchhHHhhhCChhHHHHHHHH-------hccccccccccCCCCCC-----------------CCCc
Q 045073 83 AALTYY-WRMKMPETARYTALVEGNQKKAAVDMAK-------VLDTDLTVATSAYPVPV-----------------SPEA 137 (402)
Q Consensus 83 ~~~~~~-~~~~~pesp~~l~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-----------------~~~~ 137 (402)
+++..+ ..+++||+++. ++++.+....... ....+..++.+...+.. .+.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~----~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (485)
T TIGR00711 166 GIIVVVVAFFILPRDKPA----ASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELT 241 (485)
T ss_pred HHHHHHHHHHHcCCcccc----ccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHc
Confidence 665444 34456765431 1111111100000 00000000000000000 0000
Q ss_pred cccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhh
Q 045073 138 STYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPG 216 (402)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 216 (402)
...+....+..++ +.+.......+.....++....+.|.++++ .|+++.+.+. ......++.+++
T Consensus 242 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~------------~~~~~~~~~~~~ 307 (485)
T TIGR00711 242 DDNPLVDLRLFKY--RNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGL------------HILPVGLAPMLS 307 (485)
T ss_pred CCCCccCHHHHcC--CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHH
Confidence 0000111111121 123333444444555666777788888876 6888876655 667778888999
Q ss_pred hhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccc
Q 045073 217 YWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTT 296 (402)
Q Consensus 217 ~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (402)
.++.|++.||+|||+.+..+..+.+++..++.... ... .+....... ....+++.....+..
T Consensus 308 ~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~---~~~--------------~~~~~~~~~-~~l~g~g~~~~~~~~ 369 (485)
T TIGR00711 308 SPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTF---TPD--------------TPFLAIALP-QFIRGFGMGCFFMPL 369 (485)
T ss_pred HHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccC---CCC--------------CCHHHHHHH-HHHHHHHHHHHHHHH
Confidence 99999999999999998888776666655444211 111 111222222 222222222222233
Q ss_pred ccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhc
Q 045073 297 FIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQK 337 (402)
Q Consensus 297 ~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~ 337 (402)
.....+..|++.|+++.|+.+....+|+.+|+.+.+.+.+.
T Consensus 370 ~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 370 TTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556778999999999999999999999999998888764
No 60
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.76 E-value=1.1e-16 Score=147.44 Aligned_cols=262 Identities=11% Similarity=0.034 Sum_probs=168.5
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
|.+.++..|+ +++|++..+....+.++|.++++.+++.+. +..|||..|++..+.
T Consensus 113 p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~-----------------------~~~g~~~~f~~~~~~ 167 (382)
T TIGR00902 113 PIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLI-----------------------GMFDEQNILAILTAG 167 (382)
T ss_pred hHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHH-----------------------HHcChhHHHHHHHHH
Confidence 3444555554 478899999999999999999999999887 667999999876544
Q ss_pred HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073 83 AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW 162 (402)
Q Consensus 83 ~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (402)
.++.+.. +.++|++.- ++++++. +. ...+.++ +..|+ +.++......
T Consensus 168 ~~~~~~~-~~~~~~~~~----~~~~~~~-----------------------~~--~~~~~~~-~~l~~--~~~~~~l~~~ 214 (382)
T TIGR00902 168 LAFMLIG-FLIKPTIPP----KDAIPED-----------------------ES--QGDSAFI-ALLKN--PMNLRFLAAV 214 (382)
T ss_pred HHHHHHH-HHcCCCCCC----Ccccccc-----------------------cc--ccchhHH-HHHcC--hHHHHHHHHH
Confidence 3333332 334443210 0000000 00 0000011 12222 1333333333
Q ss_pred HHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHH
Q 045073 163 FLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSI 242 (402)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~ 242 (402)
+...........+.|.+.++.|.+....+. ......++.+++..+.+++.||+|+|+.+..+.+...+
T Consensus 215 ~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~------------l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 215 CLIQGAHAAYYGFSAIYWQAAGISASATGL------------LWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVG 282 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHhHHHH------------HHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHH
Confidence 444445555666778888889998876554 56678888888888999999999999999988888887
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHH-HHH
Q 045073 243 CMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAA-AGK 321 (402)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~-~~~ 321 (402)
..+.+... .+. +.+.......+.......+....++.+. |++.|+++.++++. ...
T Consensus 283 ~~~~~~~~---------------------~~~-~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g 339 (382)
T TIGR00902 283 RWAIIGAI---------------------EAF-PLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMG 339 (382)
T ss_pred HHHHHHhH---------------------hhH-HHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHH
Confidence 77666543 222 2223223333332233334456677777 99999999999864 566
Q ss_pred HhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhe
Q 045073 322 AGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCS 360 (402)
Q Consensus 322 ~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 360 (402)
+|..+++.+.|.+.+.. +. ..|++.+++.+++.++.
T Consensus 340 ~g~~~g~~~~G~l~~~~--g~-~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 340 GLIAIFTAFAGFIYPTL--GA-GTFVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHHHHHHHHHhc--cH-HHHHHHHHHHHHHHHHH
Confidence 89999999999999987 54 66777777777665543
No 61
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.75 E-value=2.7e-16 Score=144.68 Aligned_cols=282 Identities=13% Similarity=0.087 Sum_probs=172.7
Q ss_pred CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHh-----hhhccccCcccccccccccCCCCCchhHHHH
Q 045073 2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSG-----IFLHVYNAPAFNRNHVLSAQPQGDYLWRIVL 76 (402)
Q Consensus 2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f 76 (402)
++.....+++++|+++||+++++.....++|..+++.+...+.. .++.. .+.....+..+||...
T Consensus 145 f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~----------~~~~~~g~~~~~~~~~ 214 (462)
T PRK15034 145 FASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVN----------GVPQADGSVMSLANAA 214 (462)
T ss_pred HHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccc----------cccccccchHHHHHHH
Confidence 45677889999999999999999977777777776666554331 11110 0000011356799998
Q ss_pred HHhHHHHHHHHHHH-hhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHH
Q 045073 77 MFGAVPAALTYYWR-MKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHL 155 (402)
Q Consensus 77 ~~~~i~~~~~~~~~-~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (402)
++-+++.++..++. ++++|.|. ++.+.++. ....+++ ..
T Consensus 215 ~~~~~~~iv~~i~~~~~~~~~~~----~~~~~~~~---------------------------------~~vlk~~---~~ 254 (462)
T PRK15034 215 WIWVPLLAIATIAAWSGMNDIAS----SRASIADQ---------------------------------LPVLQRL---HL 254 (462)
T ss_pred HHHHHHHHHHHHHHHHhCCCccc----cccCHHHH---------------------------------HHHhCCC---ch
Confidence 88666666554443 34444331 01111110 1111112 45
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHH
Q 045073 156 LGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLG 235 (402)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~ 235 (402)
+.+++.+++....+.+...+.|.+.++ .++.... .....+..+...+..+++|+++||+|+|+++.+
T Consensus 255 Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~~~------------l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~ 321 (462)
T PRK15034 255 WLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVNI------------LRLAFFGPFIGAIARSVGGAISDKFGGVRVTLI 321 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHH------------HHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHH
Confidence 666666666666777777788888765 2222111 002334456677788899999999999999998
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccccccccccc---------
Q 045073 236 GFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPA--------- 306 (402)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~--------- 306 (402)
+.+.+.++...+..... .... .+.+.+...+.......+.+. ...+-++...+|+
T Consensus 322 ~~i~~~i~~~~~~l~lp-~~~~--------------~~~~~~~~~~~~l~~~~G~gn-gsvfk~ip~~f~~~~~~~~~~~ 385 (462)
T PRK15034 322 NFIFMAIFSALLFLTLP-GTGS--------------GNFIAFYAVFMGLFLTAGLGS-GSTFQMIAVIFRQITIYRVKMK 385 (462)
T ss_pred HHHHHHHHHHHHHHHhc-cccc--------------cHHHHHHHHHHHHHHHhcccc-hHHHHhhHHHHhhhhhhccccc
Confidence 88766665543332211 0000 122222332222222222333 3566677788874
Q ss_pred ------------chhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073 307 ------------RLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 307 ------------~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 363 (402)
+.-|.+.|+....+.+|+++.|.+++...+..+ ++...|+.+.+..+++.++.|+.
T Consensus 386 ~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g-~~~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 386 GGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTG-SPVGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred ccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcC-CcHHHHHHHHHHHHHHHHHHHHH
Confidence 146788999999999999999999998888775 67788999999988888887754
No 62
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.75 E-value=6.2e-16 Score=143.83 Aligned_cols=250 Identities=12% Similarity=0.029 Sum_probs=150.8
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
+...+++.|++|+++|++..++......+|..+++.+++.+. +..+||+.|++.++.
T Consensus 120 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~-----------------------~~~~w~~~~~~~~~~ 176 (406)
T PRK15402 120 AVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALI-----------------------HVLPWRGMFVLFAAL 176 (406)
T ss_pred HHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------HccCccHHHHHHHHH
Confidence 345677899999999999999988888899999999988876 556899999987766
Q ss_pred HHHHHH-HHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073 83 AALTYY-WRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST 161 (402)
Q Consensus 83 ~~~~~~-~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (402)
.++..+ ..+.+||+++.. +++.+ .++.. +.++ ...++ +.++.....
T Consensus 177 ~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~-------------------------~~~~-~~~~~--~~~~~~~~~ 223 (406)
T PRK15402 177 AALSFFGLWRAMPETAGRV----GEKLS-LKELG-------------------------RDYK-LVLKN--RRFVAGALA 223 (406)
T ss_pred HHHHHHHHHHhCCCCCccc----ccccc-HHHHH-------------------------HHHH-HHHcC--cHHHHHHHH
Confidence 665444 344578775421 11000 00000 0001 11111 122222222
Q ss_pred HHHHHHHHHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073 162 WFLLDIAFYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240 (402)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~ 240 (402)
.+......+....+.|.++ +..|+++.+.+. ......++.+++.++.+++.||+++|+.+..+..+.
T Consensus 224 ~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~------------~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~ 291 (406)
T PRK15402 224 LGLVSLPLLAWIALSPVILISGEQLSSYEYGL------------LQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPM 291 (406)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 2233333344445567665 447787765443 444455677888889999999999999988887766
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG 320 (402)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~ 320 (402)
.++..++........ ... ....+.....+.+.....+........ .+++.|++..++.+...
T Consensus 292 ~~g~~~~~~~~~~~~----------------~~~-~~~~~~~~~~g~g~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~ 353 (406)
T PRK15402 292 VAGLLLAALATVISS----------------HAY-LWLTAGLSLYAFGIGLANAGLYRLTLF-SSDVSKGTVSAAMGMLS 353 (406)
T ss_pred HHHHHHHHHHHHccc----------------ccH-HHHHHHHHHHHHHHHHHhhhHHHHHhh-hccccccHHHHHHHHHH
Confidence 666655554321100 111 222222222222222222223223322 34488999999999999
Q ss_pred HHhHHHHhHhHHhhhhcc
Q 045073 321 KAGAIVGAFGVQYYTQKG 338 (402)
Q Consensus 321 ~~g~~i~~~~~~~~~~~~ 338 (402)
.++..+|+.+.+.+.+..
T Consensus 354 ~~~~~~g~~~~~~l~~~~ 371 (406)
T PRK15402 354 MLIFTVGIELSKHAYLGG 371 (406)
T ss_pred HHHHHHHHHHHHhcccCC
Confidence 999999999999987765
No 63
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.74 E-value=5.8e-16 Score=142.59 Aligned_cols=243 Identities=16% Similarity=0.104 Sum_probs=141.5
Q ss_pred cchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHH
Q 045073 4 LSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPA 83 (402)
Q Consensus 4 ~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~ 83 (402)
...+++.|++|+++|++++++.+.+..+|..+++.+++.+. +..+||+.|++.++..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~-----------------------~~~~~~~~~~~~~~~~ 155 (377)
T PRK11102 99 VINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLL-----------------------VWFSWHAIFWVLALAA 155 (377)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------HHcChHHHHHHHHHHH
Confidence 45678999999999999999999999999999999998886 5568999999876666
Q ss_pred HHH-HHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073 84 ALT-YYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW 162 (402)
Q Consensus 84 ~~~-~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (402)
++. ++..+++||+++. . ++++.+.. ...+.+++...++ ..+...+..
T Consensus 156 ~~~~~~~~~~~~~~~~~--~-~~~~~~~~--------------------------~~~~~~~~~~~~~---~~~~~~~~~ 203 (377)
T PRK11102 156 ILAAALVFFFIPETLPK--E-RRQPFHLR--------------------------TTIRNFASLFRHK---RVLGYMLAS 203 (377)
T ss_pred HHHHHHHHHhCCccCcc--c-ccCCCChH--------------------------HHHHHHHHHHcCh---HHHHHHHHH
Confidence 554 3444567776421 0 00000000 0000001111111 222222222
Q ss_pred HHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHH
Q 045073 163 FLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMS 241 (402)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~ 241 (402)
+......+....+.|.++. ..|+++.+.+. ......++.+++.++.+++.||+|||+.+..+..+..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~ 271 (377)
T PRK11102 204 GFSFAGMFSFLTAGPFVYIELNGVSPQNFGY------------YFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQF 271 (377)
T ss_pred HHHHHHHHHHHHcCHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 2333334444445565554 47888776554 6667778888899999999999999999888776544
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHH
Q 045073 242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGK 321 (402)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 321 (402)
+..+.+...... . ...+............ .....+....+..|..| +.|+++.++.+....
T Consensus 272 ~~~~~~~~~~~~-~----------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~ 332 (377)
T PRK11102 272 IMGIWLVVSALL-D----------------LGFWALVVGVAAFVGC-VSMISSNAMAVILDEFP-HMAGTASSLAGTLRF 332 (377)
T ss_pred HHHHHHHHHHHH-h----------------hhHHHHHHHHHHHHHH-HHHhhHHHHHHHhcccc-ccchHHHHHHHHHHH
Confidence 433332221110 0 1111122122122121 11222234445677767 788999998876644
Q ss_pred -HhHHHHhHhHH
Q 045073 322 -AGAIVGAFGVQ 332 (402)
Q Consensus 322 -~g~~i~~~~~~ 332 (402)
++..+++.+.+
T Consensus 333 ~~g~~~g~~~~~ 344 (377)
T PRK11102 333 GIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHh
Confidence 45556665433
No 64
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.74 E-value=4.5e-16 Score=143.89 Aligned_cols=266 Identities=13% Similarity=0.010 Sum_probs=156.9
Q ss_pred hhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHHHH
Q 045073 7 VIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAALT 86 (402)
Q Consensus 7 ~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~~~ 86 (402)
.+..|..++++++.+.+....+..+|.++++...+.+. +..|||..|++.++..++.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~-----------------------~~~gw~~~f~~~a~l~~~~ 176 (390)
T TIGR02718 120 GMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLF-----------------------GKFGQRPAFLLVACVPLAS 176 (390)
T ss_pred HHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------HHhCHHHHHHHHHHHHHHH
Confidence 34567777777788888888888888888888777776 5678999999977766665
Q ss_pred HHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHHHHH
Q 045073 87 YYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLD 166 (402)
Q Consensus 87 ~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (402)
.+..++++|++.. +++++++.. +. +++..+++..+..+... +...
T Consensus 177 ~~~~~~~~~~~~~---~~~~~~~~~-------------------------~~----~~~~l~~~~~~~~~~~~---~l~~ 221 (390)
T TIGR02718 177 LVCVLWLKDRAVA---SPEAPLARR-------------------------AS----LFRFFRRPLAWSLLALA---LLSA 221 (390)
T ss_pred HHHHHHcCCCCcC---ccccchhhH-------------------------HH----HHHHHcCcCHHHHHHHH---HHHH
Confidence 5544455443210 000000000 00 01111112111122222 2222
Q ss_pred HHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHH-HhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHH
Q 045073 167 IAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVA-LFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMA 245 (402)
Q Consensus 167 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~ 245 (402)
........+.+.+.++.|+++++.+. ..... .+..+++.++.|++.||+|+|+.+..+..+.++..+
T Consensus 222 ~~~~~~~~~~~~~l~~~G~s~~~ig~------------~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~ 289 (390)
T TIGR02718 222 MTAVSGFGLSKLYLVDAGWPLEWIGR------------LGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLAL 289 (390)
T ss_pred HHHHHHHHHhhHHHHhcCCCHHHHHH------------HHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 23333444567777888999887554 33333 346667788999999999999998877665533322
Q ss_pred HHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccccccccccc-chhhhhhhHHHHHHHHhH
Q 045073 246 ILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPA-RLRSTCHGISAAAGKAGA 324 (402)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-~~r~~~~~~~~~~~~~g~ 324 (402)
........... ... ...........+......+...+...+..++ +.+++..++.+....+|.
T Consensus 290 ~~~~~~~~~~~---------------~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~ 353 (390)
T TIGR02718 290 LWFAQAAFWLA---------------PGI-AVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGE 353 (390)
T ss_pred HHHHHHHcccC---------------CcH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHH
Confidence 22211110100 111 1111111111111111223344455555665 889999999999999999
Q ss_pred HHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhe
Q 045073 325 IVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCS 360 (402)
Q Consensus 325 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 360 (402)
.++|.+.+.+.+.. ++...|.+.+++.+++.++.
T Consensus 354 ~~g~~~~G~l~~~~--G~~~~f~~~~~~~l~a~~~~ 387 (390)
T TIGR02718 354 LIASSIAGYLTDRF--GYAGGFLSGTVLAVLAILLA 387 (390)
T ss_pred HHHHHHHHHHHHHH--ccHHHHHHHHHHHHHHHHHh
Confidence 99999999999987 78888888877777765543
No 65
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.74 E-value=5.4e-16 Score=143.20 Aligned_cols=269 Identities=12% Similarity=-0.005 Sum_probs=157.7
Q ss_pred CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073 2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV 81 (402)
Q Consensus 2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i 81 (402)
+|...+++.|++|+++|++++++.+....+|.++||.+++.+. + +.|+..+.+.+.
T Consensus 106 ~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~-----------------------~-~~~~~~~~i~~~ 161 (393)
T PRK11195 106 SPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALA-----------------------D-PHAEAALAVCAL 161 (393)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------H-HHHHHHHHHHHH
Confidence 4677889999999999999999999999999999999999986 2 237777776655
Q ss_pred HHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhH-HHHHHHH
Q 045073 82 PAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGL-HLLGTTS 160 (402)
Q Consensus 82 ~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 160 (402)
..++.++..+.+||+|... ++.+.+......+.. +.++....++..+ .++...+
T Consensus 162 ~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~----------------------~~~~~l~~~~~~~~~~~~~~~ 216 (393)
T PRK11195 162 IYLLAALFNLFIPRLGARR---PGQSWNPIALLRDFF----------------------HACRVLWRDKLGRFSLAGTTL 216 (393)
T ss_pred HHHHHHHHHhcCCCCcccc---cccCCCHHHHHHHHH----------------------HHHHHHHhCchhHHHHHHHHH
Confidence 5555555556788876431 111111100000000 0000101111111 1111111
Q ss_pred HHHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073 161 TWFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL 239 (402)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~ 239 (402)
.+.. ........|.+.+ .+|.++.+.+. ......++.++++++.+++.||.++|+.+..+..
T Consensus 217 ~~~~----~~~~~~~~~~~~~~~lg~s~~~~G~------------~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~- 279 (393)
T PRK11195 217 FWGA----GATLRFLVLAWAPVALGITLNQPAY------------LQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL- 279 (393)
T ss_pred HHHH----HHHHHHHHHHHHHHHcCCChhHHHH------------HHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-
Confidence 1221 2222233344443 36777776555 7778888899999999999999998887776643
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccch-hhhhhhHHHH
Q 045073 240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARL-RSTCHGISAA 318 (402)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~-r~~~~~~~~~ 318 (402)
.++....+... .+.+.... .....+.+.....+...+...+..|++. +|++.++.+.
T Consensus 280 ~~~~~~~~~~~---------------------~~~~~~~~-~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~ 337 (393)
T PRK11195 280 MGLVVLLMALQ---------------------HSLLPAYP-LLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNF 337 (393)
T ss_pred HHHHHHHHHHH---------------------hHHHHHHH-HHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhH
Confidence 33322222221 12222222 2222222222222334555677766655 7999999999
Q ss_pred HHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee
Q 045073 319 AGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF 361 (402)
Q Consensus 319 ~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~ 361 (402)
..+++..++..+.+.+. .. +.+..+.+.+...++++.+.+
T Consensus 338 ~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~ 377 (393)
T PRK11195 338 NENLAMLLMLGLYSLLV-KL--GVPVVAVIVGFGLLVALAMAL 377 (393)
T ss_pred HHHHHHHHHHHHHHHHH-Hc--CCCHHHHHHHHHHHHHHHHHH
Confidence 99999999998888664 33 677666666555555555544
No 66
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.74 E-value=2.3e-16 Score=148.29 Aligned_cols=252 Identities=17% Similarity=0.123 Sum_probs=148.0
Q ss_pred hhhhhhcc-CcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHH
Q 045073 6 AVIMSEYA-NKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAA 84 (402)
Q Consensus 6 ~~~i~e~~-~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~ 84 (402)
.++..|.. ++++|++..++.+.+..+|.++++.+...+...... ..+..+||+.+++.+++++
T Consensus 121 ~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~----------------~~~~~g~~~~~~i~~~l~~ 184 (437)
T TIGR00792 121 WSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGG----------------GDDKFGWFMFALVLALIGV 184 (437)
T ss_pred hhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----------------CcccccHHHHHHHHHHHHH
Confidence 35667877 578999999999999999998888877666533221 1145689999988777666
Q ss_pred HHHHH-HhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHH
Q 045073 85 LTYYW-RMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWF 163 (402)
Q Consensus 85 ~~~~~-~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (402)
+..+. .++++|.++. ++.++ +++.+..+.++....++ .++......+
T Consensus 185 ~~~~~~~~~~~e~~~~----~~~~~-------------------------~~~~~~~~~~~~l~~~~---~~~~~~~~~~ 232 (437)
T TIGR00792 185 VSLIICFFGTKERYSE----IPKNI-------------------------EKKLSLKQIFKALFKND---QLLILCLAYL 232 (437)
T ss_pred HHHHHHHcCCEecCCC----CCccc-------------------------ccCCCHHHHHHHHhCCH---HHHHHHHHHH
Confidence 65443 4557775421 00000 00001111111111112 2233333333
Q ss_pred HHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHH
Q 045073 164 LLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSIC 243 (402)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~ 243 (402)
......+....+.+.+.+...-++...+ .......++.+++.++.++++||+|||+.+..+..+.+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~ 300 (437)
T TIGR00792 233 FYNLAFNIKNGVQVYYFTYVLGDPELFS------------YMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLG 300 (437)
T ss_pred HHHHHHHHHcchhheeEeeecCChHHHH------------HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 3333444433344444443211222211 1445557888888999999999999999998887776666
Q ss_pred HHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccc-------cchhhhhhhHH
Q 045073 244 MAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFP-------ARLRSTCHGIS 316 (402)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~~~~~~ 316 (402)
.+.+.+.. .+. ....+..+..++......+..+++.+|..+ ++.+|+..|+.
T Consensus 301 ~~~~~~~~--------------------~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 359 (437)
T TIGR00792 301 YLIFFFAG--------------------SNL-PLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVR 359 (437)
T ss_pred HHHHHHcc--------------------hhH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHH
Confidence 55443321 111 222222222222223334556677777754 56679999999
Q ss_pred HHHHHHhHHHHhHhHHhhhhcc
Q 045073 317 AAAGKAGAIVGAFGVQYYTQKG 338 (402)
Q Consensus 317 ~~~~~~g~~i~~~~~~~~~~~~ 338 (402)
+....+|..+++.+.+.+.+..
T Consensus 360 ~~~~~~g~~lg~~i~g~ll~~~ 381 (437)
T TIGR00792 360 TFVRKLGQALAGFLVGLILGII 381 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999988765
No 67
>PRK11043 putative transporter; Provisional
Probab=99.74 E-value=1.3e-15 Score=141.50 Aligned_cols=242 Identities=10% Similarity=0.092 Sum_probs=149.9
Q ss_pred hhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHHH
Q 045073 6 AVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAAL 85 (402)
Q Consensus 6 ~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~~ 85 (402)
.+++.|++|+++|++..+.......+|..+++.+++.+. +..+||+.|++.++..++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~-----------------------~~~g~~~~~~~~~~~~~~ 172 (401)
T PRK11043 116 QALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLL-----------------------NHFGWQAIFATLFAITLL 172 (401)
T ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------hcCChHHHHHHHHHHHHH
Confidence 467889999999999999988889999999999998886 567899999987777766
Q ss_pred HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHHHH
Q 045073 86 TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLL 165 (402)
Q Consensus 86 ~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (402)
..+..++++|+++. ++ +++..+.. +...+++ ..+...+.....
T Consensus 173 ~~~~~~~~~~~~~~----~~-~~~~~~~~-----------------------------~~~~~~~---~~~~~~~~~~~~ 215 (401)
T PRK11043 173 LILPTLRLKPSKKA----RK-QSQDALTF-----------------------------KQLLKSK---TYLGNVLIFAAC 215 (401)
T ss_pred HHHHHHHcCCCCCc----cc-cchHHHHH-----------------------------HHHHcCh---hHHHHHHHHHHH
Confidence 65555556655421 11 00000000 1111111 111111222222
Q ss_pred HHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHH
Q 045073 166 DIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMA 245 (402)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~ 245 (402)
...++....+.|.+.++.|++..+.+. ......++.++|.++.+++.||+++|+.+.......+++.+
T Consensus 216 ~~~~~~~~~~~p~~~~~~g~s~~~~g~------------~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~ 283 (401)
T PRK11043 216 SAAFFAWLTGSPFILEQMGYSPADIGL------------SYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVI 283 (401)
T ss_pred HHHHHHHHHHhHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 334445556778888888888776554 44555677788888899999999999876655555444443
Q ss_pred HHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHH
Q 045073 246 ILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAI 325 (402)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~ 325 (402)
.+...... . . ...+...... ...+.......+.......+..| +.|+++.|+.+..+..++.
T Consensus 284 ~~~~~~~~-~-~--------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~ 345 (401)
T PRK11043 284 AIWLASLL-S-H--------------PSLVPLLIPF-CVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCF 345 (401)
T ss_pred HHHHHHHh-c-c--------------CcHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHH
Confidence 33222110 0 0 1222222222 22222233344555555566666 5799999999999888888
Q ss_pred HHhHhHHhhhhc
Q 045073 326 VGAFGVQYYTQK 337 (402)
Q Consensus 326 i~~~~~~~~~~~ 337 (402)
.++.+.+.+.+.
T Consensus 346 ~~~~~~g~l~~~ 357 (401)
T PRK11043 346 LASLLVSALIST 357 (401)
T ss_pred HHHHHHHHccCC
Confidence 898888888764
No 68
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.74 E-value=8.4e-16 Score=142.27 Aligned_cols=177 Identities=12% Similarity=0.114 Sum_probs=110.3
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
+...+++.|++|+++|+++.++.+....+|.++++.+++.+. +..+||+.|++.++.
T Consensus 110 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~-----------------------~~~g~~~~~~~~~~~ 166 (392)
T PRK10473 110 VVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIM-----------------------LKFPWQSLFYTMAAM 166 (392)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------hCcChHHHHHHHHHH
Confidence 345678899999999999999999999999999999988775 557899999987666
Q ss_pred HHHH-HHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073 83 AALT-YYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST 161 (402)
Q Consensus 83 ~~~~-~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (402)
+++. ++..+++||++.. . ++++.... +.. +...+++ .++.....
T Consensus 167 ~~i~~~~~~~~~~~~~~~--~-~~~~~~~~-------------------------~~~----~~~~~~~---~~~~~~~~ 211 (392)
T PRK10473 167 GILVLLLSLFILKETRPA--R-APAASSKP-------------------------REN----SESLLNR---FFLSRLVI 211 (392)
T ss_pred HHHHHHHHHHHcCCCCCc--c-cCCccchH-------------------------HHH----HHHHhCH---HHHHHHHH
Confidence 5554 3344567776422 0 00000000 000 1111111 11111111
Q ss_pred HHHHHHHHHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073 162 WFLLDIAFYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240 (402)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~ 240 (402)
.............+.|.++ ++.|+++.+.+. ......++.+++.++.+++.||+|||+.+..+..+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------------~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~ 279 (392)
T PRK10473 212 TTLSVTVILTFVNTSPVLLMEQMGFSRGEYAI------------IMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLF 279 (392)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 1111111222333445554 456887765443 556677788888899999999999999988887776
Q ss_pred HHHHHHHHH
Q 045073 241 SICMAILGA 249 (402)
Q Consensus 241 ~~~~~~~~~ 249 (402)
.++.+.+..
T Consensus 280 ~~~~~~~~~ 288 (392)
T PRK10473 280 LAAGITLAL 288 (392)
T ss_pred HHHHHHHHH
Confidence 666655554
No 69
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.73 E-value=3.4e-17 Score=149.26 Aligned_cols=246 Identities=19% Similarity=0.218 Sum_probs=153.2
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
+...+++.|++|+++|++++++...+..+|.++++.+++.+. +..+||+.|++.++.
T Consensus 104 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~-----------------------~~~~~~~~~~~~~~~ 160 (352)
T PF07690_consen 104 PASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLI-----------------------SYFGWRWAFLISAIL 160 (352)
T ss_dssp HHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-----------------------CHCHHCCHHHHHHHH
T ss_pred ccccccccccchhhhhhhccccccchhhhhhhcccchhhhhh-----------------------hccccccccccccch
Confidence 456788999999999999999999999999999999999875 667899999998887
Q ss_pred HHHHHHH-HhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073 83 AALTYYW-RMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST 161 (402)
Q Consensus 83 ~~~~~~~-~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (402)
.++..++ ..+++++|.....+++++++ + +.++...+.++....++ .++.....
T Consensus 161 ~~~~~il~~~~~~~~~~~~~~~~~~~~~--~---------------------~~~~~~~~~~~~~~~~~---~~~~~~~~ 214 (352)
T PF07690_consen 161 SLIAAILFILFLPEPPPPRERESPKESE--S---------------------KKPKPLKPGFKSLFKNP---VLWILLIA 214 (352)
T ss_dssp HHHHHHHHHCCC---STTTT--SSTTTT-------------------------HHHCCCH-CTHHHHHH---CCHHHHHH
T ss_pred hhhhhhhHhhhhhhcccccccccccccc--c---------------------ccccccccccccccccc---hhhhhhhh
Confidence 7776553 34555554321111111100 0 00000001112111111 11122223
Q ss_pred HHHHHHHHHHHHhhhhhh-hhhcCcc-hhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073 162 WFLLDIAFYTINLAQKDI-YPATGIV-RKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL 239 (402)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~-~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~ 239 (402)
.+......+....+.|.+ .+..|.+ ..+.+. ......+..+++.++.+++.||+++|+........
T Consensus 215 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 282 (352)
T PF07690_consen 215 FFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGL------------LFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILL 282 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHhhcccchhhhhccCCCHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHH
Confidence 333334555577778887 4567777 454433 56677777888888999999999987777666555
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073 240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA 319 (402)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 319 (402)
..+..+.+...... .+.........+ .+++.....+....+..|..|++.|+++.|+.+..
T Consensus 283 ~~~~~~~~~~~~~~------------------~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 343 (352)
T PF07690_consen 283 LILGALGLLLLPFS------------------SSPVWLIIALFL-IGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSI 343 (352)
T ss_dssp HHHHHHHHCCSHHH------------------CHHHHHHHHHHH-HHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh------------------hhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 54444433332110 111222222222 23333344567888899999999999999999999
Q ss_pred HHHhHHHHh
Q 045073 320 GKAGAIVGA 328 (402)
Q Consensus 320 ~~~g~~i~~ 328 (402)
..+++.++|
T Consensus 344 ~~~~~~igP 352 (352)
T PF07690_consen 344 GSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHCC
Confidence 999999887
No 70
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.72 E-value=1.3e-16 Score=148.94 Aligned_cols=135 Identities=18% Similarity=0.058 Sum_probs=94.6
Q ss_pred HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073 205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT 284 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (402)
......++..++.++.|++.||+|||+.+..+.++.++...++.+. .+.+.. ......
T Consensus 267 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~---------------------~~~~~~-~~~~~l 324 (420)
T PRK09528 267 LNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFA---------------------TGPLEV-SILKLL 324 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhc---------------------ccHHHH-HHHHHH
Confidence 5555666777888899999999999999888777766665555432 222222 222222
Q ss_pred HHHHhhCCccccccccccccccchhhhhhhH-HHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073 285 LFFANFGPNSTTFIVPAELFPARLRSTCHGI-SAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~-~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 363 (402)
.+.......+....+..|.+|++.|++..+. .+....+|.++++.+.+.+.+.. |++..|.+.+++.++..++.++.
T Consensus 325 ~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~--G~~~~f~~~~~~~~i~~~~~~~~ 402 (420)
T PRK09528 325 HAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSI--GFQGTYLILGGIVLLFTLISVFT 402 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhh--CchHHHHHHHHHHHHHHHHHHHH
Confidence 2222222223445677888999999988766 56778899999999999999987 89999998888877666555543
No 71
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.72 E-value=2.7e-15 Score=133.42 Aligned_cols=270 Identities=11% Similarity=-0.017 Sum_probs=163.9
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHh-HH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFG-AV 81 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~-~i 81 (402)
+.++.|+++..|++++.+.+++.+.++++|.+++|.++..+......+..+. ..........||+++++. ++
T Consensus 29 ~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~-------~~~~~~~~~~~~~~yl~ia~~ 101 (310)
T TIGR01272 29 VAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQ-------VATANAEAAKVHTPYLLLAGA 101 (310)
T ss_pred hhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhh-------hhhhhHHHHHHHHHHHHHHHH
Confidence 4568899999999999999999999999999999999998863211000000 000000125799999864 44
Q ss_pred HHHHHHHH-HhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073 82 PAALTYYW-RMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS 160 (402)
Q Consensus 82 ~~~~~~~~-~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (402)
..++.++. +..+||... ++.++. .+ ++... +++..++ +..+...+
T Consensus 102 ~~~~~i~~~~~~~p~~~~------~~~~~~----------------~~-----~~~~~-----~~~~~~~--~~~~l~~~ 147 (310)
T TIGR01272 102 LAVLAIIFAFLPLPELQE------ADVARV----------------SS-----GDTTQ-----KTSAFQF--THLVLGAL 147 (310)
T ss_pred HHHHHHHHHHccCCCCCc------cccccc----------------cc-----ccccc-----hhhHHhh--HHHHHHHH
Confidence 34433332 223455311 100000 00 00000 1111221 23333444
Q ss_pred HHHHHHHHHHHHHhhhhhhhhh---cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHH
Q 045073 161 TWFLLDIAFYTINLAQKDIYPA---TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGF 237 (402)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~ 237 (402)
..++....-.+...|.+.|+.+ .|+++.+.+. .......+.++|+++++++.||+|+|+.+.++.
T Consensus 148 ~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~------------~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~ 215 (310)
T TIGR01272 148 GIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAH------------FTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNA 215 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 4444444556667788888864 4788776555 778888899999999999999999999888776
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHH
Q 045073 238 LLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISA 317 (402)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~ 317 (402)
.+..++.++.... ....... ... ..+++.....|...+...+.+|++ .+++.++.
T Consensus 216 ~l~~~~~~l~~~~---------------------~~~~~~~-~~~-l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~- 270 (310)
T TIGR01272 216 FLAVLLSIGAALT---------------------HGYVAMW-FVL-ALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL- 270 (310)
T ss_pred HHHHHHHHHHHHc---------------------CCHHHHH-HHH-HHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-
Confidence 6665554333221 1111122 111 223334455677777778888764 45666765
Q ss_pred HHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHH
Q 045073 318 AAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVV 352 (402)
Q Consensus 318 ~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (402)
..+.+|+++.|.+.|.+.|.. +.+..+++..++
T Consensus 271 ~~~~~Gg~i~P~l~G~lad~~--g~~~a~~v~~~~ 303 (310)
T TIGR01272 271 CLAIVGGAIVPLLQGSLADCL--GIQLAFALPVPC 303 (310)
T ss_pred HHHHhcchHHHHHHHHHHHhc--cchHHHHHHHHH
Confidence 577799999999999999977 777776644433
No 72
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.72 E-value=1.8e-15 Score=139.35 Aligned_cols=153 Identities=14% Similarity=0.084 Sum_probs=107.2
Q ss_pred HHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 045073 171 TINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGAR 250 (402)
Q Consensus 171 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~ 250 (402)
....+.|.+.++.|.+....+. ......++.+++.+..|++.||+|+|+.+..+.....++.+.+..
T Consensus 218 ~~~~~lp~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~- 284 (381)
T PRK03633 218 SLYGLMPLYLNHQGMSDASIGF------------WMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAMLS- 284 (381)
T ss_pred HHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHhh-
Confidence 3345678888888888776444 556677788889999999999999999888776666555433221
Q ss_pred hhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHh
Q 045073 251 YDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFG 330 (402)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~ 330 (402)
.. .......+ .+.......|...+.+.|..|++.++...+..+....+|..++|.+
T Consensus 285 ---------------------~~--~~~~~~~l-~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~ 340 (381)
T PRK03633 285 ---------------------QA--AMAPALFI-LGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSF 340 (381)
T ss_pred ---------------------hH--HHHHHHHH-HHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01 11111111 1222233456677778898988888888888888888999999999
Q ss_pred HHhhhhccCCcchhhHHHHHHHHHHHhhheee
Q 045073 331 VQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM 362 (402)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~ 362 (402)
.+.+.+.. ++...|.+.+++.++..+..+.
T Consensus 341 ~G~l~~~~--g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 341 TAMLMQNY--SDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHHHHh--CccHHHHHHHHHHHHHHHHHHh
Confidence 99999887 7888888888777766555443
No 73
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.71 E-value=1.1e-14 Score=135.71 Aligned_cols=297 Identities=16% Similarity=0.152 Sum_probs=195.6
Q ss_pred hhhhhhccCcccc--------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccc
Q 045073 6 AVIMSEYANKRTR--------------------------GAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRN 59 (402)
Q Consensus 6 ~~~i~e~~~~~~R--------------------------g~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~ 59 (402)
.+|+.|..+++++ ++..+.-.....+|.++.-++...+....+..
T Consensus 148 na~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~--------- 218 (477)
T PF11700_consen 148 NAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGST--------- 218 (477)
T ss_pred HHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCc---------
Confidence 4677888888888 99999888888899988888877765322211
Q ss_pred cccccCCCCCchhHHHHHHhHHH-HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCcc
Q 045073 60 HVLSAQPQGDYLWRIVLMFGAVP-AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEAS 138 (402)
Q Consensus 60 ~~~~~~~~~~~~Wr~~f~~~~i~-~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (402)
..+..+-|..+.+.++. .+..+...+++||.|+.. ..++...--....++
T Consensus 219 ------~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~-~~~~~~~~~~~g~~~---------------------- 269 (477)
T PF11700_consen 219 ------ASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPR-PLPSGSSYLRFGFKR---------------------- 269 (477)
T ss_pred ------cccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCC-CCCcchhHHHHHHHH----------------------
Confidence 11345578888886655 445666777789887520 001111000000110
Q ss_pred ccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhh
Q 045073 139 TYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGY 217 (402)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 217 (402)
.++.+++ . ++.+.+....+.+++..-+...+......+.+ .+|++..+... ..+...+.+++|+
T Consensus 270 l~~t~k~--~-~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~------------~~l~~~i~a~~Ga 334 (477)
T PF11700_consen 270 LWRTFKE--I-RKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIV------------FGLVVQIVAIIGA 334 (477)
T ss_pred HHHHHHH--H-HhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHH------------HHHHHHHHHHHHH
Confidence 0111111 1 22235555566666666666677777777765 68999887544 6777788899999
Q ss_pred hhHHHhhhccchh--HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccc
Q 045073 218 WFTVFLIDRIGRF--IIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNST 295 (402)
Q Consensus 218 ~~~g~l~dr~grr--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (402)
++.+++.||+|.| ++++.+..+..+..+. +......... . . .+. +-+.++.+..+....+.++.
T Consensus 335 ~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~-g~~G~~~~~~--g--------~--~~~-~~f~~~a~~~G~~~G~~qs~ 400 (477)
T PF11700_consen 335 LLFGWLQDRFGPKTKRTLLISLILWIIIPLY-GLFGFWPSFF--G--------L--KSP-WEFWVLAVLIGLFMGGIQSA 400 (477)
T ss_pred HHHHHHHHHhCCchhHHHHHHHHHHHHHHHH-HHHHhhhccc--C--------c--ccH-HHHHHHHHHHHHHhhhHHHH
Confidence 9999999999998 7777665554332222 1211000000 0 0 122 22333444445556667788
Q ss_pred cccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccCCcc
Q 045073 296 TFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETNGLS 370 (402)
Q Consensus 296 ~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~~~~ 370 (402)
.-++.+|+.|++..+.-.|++...+...+++||++++.+.+.++ +.+..+....++.++++++.+.++..|+++
T Consensus 401 sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg-~~r~g~~~l~~lf~~gl~ll~~v~~~~g~~ 474 (477)
T PF11700_consen 401 SRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG-SQRYGFLFLLVLFLIGLILLFFVDVEKGRE 474 (477)
T ss_pred HHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CchhHHHHHHHHHHHHHHHHhhccchhhhh
Confidence 88899999999999999999999999999999999999999885 588888888888899988888776655543
No 74
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.71 E-value=1.8e-15 Score=139.36 Aligned_cols=261 Identities=10% Similarity=0.050 Sum_probs=154.4
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
|.+.+++.++ .++|++..+....+.++|.++++.+++.+. +..|||..|++.++.
T Consensus 113 ~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~-----------------------~~~g~~~~f~~~~~~ 167 (382)
T PRK11128 113 PLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLV-----------------------SWFGEQAILWILTAG 167 (382)
T ss_pred cHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHH-----------------------HHcChhHHHHHHHHH
Confidence 3344555665 456888888888899999999999999987 667999999886655
Q ss_pred HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073 83 AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW 162 (402)
Q Consensus 83 ~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (402)
.++.++..++.||.++. +++++. .+ ...+.++ ..+|+ +.++......
T Consensus 168 ~~~~~~~~~~~~~~~~~-----~~~~~~-----------------------~~--~~~~~~~-~i~~~--~~~~~~~~~~ 214 (382)
T PRK11128 168 VASMLLGQLLRPTIMPQ-----GESRQQ-----------------------ES--AGWPAWK-ALLKE--PTVWRFLLCV 214 (382)
T ss_pred HHHHHHHHHccCCCCCc-----cccccc-----------------------cc--cccchHH-HHHcC--hhHHHHHHHH
Confidence 44444444445553211 000000 00 0000111 12222 1233333333
Q ss_pred HHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHH
Q 045073 163 FLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSI 242 (402)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~ 242 (402)
+...........+.|.+.++.|.+..+.+. ......++.++..++.+++.||+|+|+.+..+....++
T Consensus 215 ~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~ 282 (382)
T PRK11128 215 SLLQGSHAAYYGFSAIYWQAAGYSASTIGY------------LWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVV 282 (382)
T ss_pred HHHHHHhHhHHHHHHHHHHHCCCCHhHHHH------------HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 333333444455667777778888766544 45566677888888999999999999998888777666
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH-HH
Q 045073 243 CMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA-GK 321 (402)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~-~~ 321 (402)
..+.+... ++. +.+.+..+..+.......+....+..+. +++.+++..++.+.. ..
T Consensus 283 ~~~~~~~~---------------------~~~-~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 339 (382)
T PRK11128 283 RWGLMGST---------------------TAL-PWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMG 339 (382)
T ss_pred HHHHHHhh---------------------hhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHH
Confidence 65544332 222 2222222222222222233445556665 555568888887644 45
Q ss_pred HhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhh
Q 045073 322 AGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLC 359 (402)
Q Consensus 322 ~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~ 359 (402)
+|..++|.+.|.+.+.. +. ..++..+++.+++.++
T Consensus 340 ~g~~ig~~i~G~l~~~~--g~-~~~~~~~~~~~~~~~~ 374 (382)
T PRK11128 340 GSIAIMTVLSGFLYQHL--GA-GVFWVMALVALPALFI 374 (382)
T ss_pred HHHHHHHHHHHHHHHhc--cH-HHHHHHHHHHHHHHHH
Confidence 67789999999999987 54 4555556555555443
No 75
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.70 E-value=1.1e-15 Score=142.15 Aligned_cols=175 Identities=11% Similarity=0.037 Sum_probs=113.3
Q ss_pred HHHhhhhhhhhhcCcchhhh-hhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 045073 171 TINLAQKDIYPATGIVRKAA-AMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGA 249 (402)
Q Consensus 171 ~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~ 249 (402)
....+.+.+.++.|.++... +. .............+..+++.+..++++||+|||+++..+.++.+++..++..
T Consensus 226 ~~~~~~~~~~~~~g~~~~~~~~~-----~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~ 300 (418)
T TIGR00889 226 ITNIFGNGFLHEFGRNPEFADSF-----VVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAY 300 (418)
T ss_pred HHHHhHHHHHHHhcccccccchh-----hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 33355577776666554211 00 0002223666677788888889999999999999999988877776555444
Q ss_pred HhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHH-HHHHHhHHHHh
Q 045073 250 RYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISA-AAGKAGAIVGA 328 (402)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~-~~~~~g~~i~~ 328 (402)
... . ........+..+..+.......+....++.|.+|++.|+++.|+.+ ....+|.+++|
T Consensus 301 ~~~----~--------------~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp 362 (418)
T TIGR00889 301 GDP----E--------------YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGY 362 (418)
T ss_pred cCc----c--------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 210 0 0011222222222222222333455667899999999999999997 56788999999
Q ss_pred HhHHhhhhccC----CcchhhHHHHHHHHHHHhhheee-eeccCC
Q 045073 329 FGVQYYTQKGD----KQIKQSIITLAVVNFLGFLCSFM-VPETNG 368 (402)
Q Consensus 329 ~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~i~~~~-~~et~~ 368 (402)
.+.|.+.+..+ .+|+..|.+.+++.+++.++.++ ++|+++
T Consensus 363 ~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 363 ILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred HHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 99999998753 15788888888887777666554 476644
No 76
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.70 E-value=1.6e-15 Score=158.87 Aligned_cols=283 Identities=14% Similarity=0.037 Sum_probs=169.9
Q ss_pred CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073 2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV 81 (402)
Q Consensus 2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i 81 (402)
.|+..+++.|++|+++|++++++.+++.++|.++|+.+++++. ...+|++.|+..++
T Consensus 126 ~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~-----------------------~~~~~~~~~~~~~~ 182 (1140)
T PRK06814 126 GPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLAT-----------------------ISGNFVILVALLMG 182 (1140)
T ss_pred chHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHH-----------------------hccccHHHHHHHHH
Confidence 3677889999999999999999999999999999999999997 56789999966666
Q ss_pred HHHHHHHHHhhccCCchhHHhhhCChh-HHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073 82 PAALTYYWRMKMPETARYTALVEGNQK-KAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS 160 (402)
Q Consensus 82 ~~~~~~~~~~~~pesp~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (402)
.+++.+++.+++|+++.- ....+.+ ...+.. .+.++. ..++ +.++...+
T Consensus 183 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-------------------------~~~~~~-~~~~--~~~~~~~~ 232 (1140)
T PRK06814 183 IAVLGWLASLFIPKTGNA--APDLKIDRNIIRST-------------------------ITLLKY-AKAD--KRIWLAIL 232 (1140)
T ss_pred HHHHHHHHHhhCCCCCCC--CCCCeeccchHHHH-------------------------HHHHHH-HhcC--chHHHHHH
Confidence 666666666677776421 0000000 000000 000111 1111 12333333
Q ss_pred HHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073 161 TWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL 239 (402)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~ 239 (402)
..+...........+.|.++++ +|.+....+. +.....++.++|.++.|++.++.++++.+..+.++
T Consensus 233 ~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~------------~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~ 300 (1140)
T PRK06814 233 GISWFWLVGAVVLSQLPLLAKETLGGDENVATL------------FLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALL 300 (1140)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHH------------HHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHH
Confidence 3333334445556677888765 6777776554 77788889999999999999887776655555554
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073 240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA 319 (402)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 319 (402)
.+++.+.+.+............. -..........+.+.+..++.+++.....+...+++.+..|++.||+++|+.+++
T Consensus 301 ~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~ 378 (1140)
T PRK06814 301 MGLFGLDLAFASSSVPAEPAQLK--SILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVL 378 (1140)
T ss_pred HHHHHHHHHhccccccccccccc--chhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHH
Confidence 44444333321000000000000 0000000011122222222223333334445778889999999999999999999
Q ss_pred HHHhHHHHhHhHHhhhhccCCcchhhHHHHHHH
Q 045073 320 GKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVV 352 (402)
Q Consensus 320 ~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (402)
..++..+++.+.+.+.+... ++...+++.+++
T Consensus 379 ~~~~~~ig~~~~g~l~~~~~-~~~~~~~~~~~~ 410 (1140)
T PRK06814 379 NAAFMVAGTIILALLQALGF-SIPWIILFIALA 410 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhcc-CHHHHHHHHHHH
Confidence 99999999998888874321 444554444443
No 77
>PRK10054 putative transporter; Provisional
Probab=99.70 E-value=1.4e-15 Score=140.53 Aligned_cols=263 Identities=11% Similarity=0.077 Sum_probs=155.7
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
+....+..|..|+++|+++.++.....++|.++++.+++.+. . .+||..|++.++.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~-----------------------~-~g~~~~f~~~~~~ 170 (395)
T PRK10054 115 TVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLV-----------------------M-QSINLPFWLAAIC 170 (395)
T ss_pred HHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------H-hccCcHHHHHHHH
Confidence 345677789999999999999999999999999999999875 2 4799999987776
Q ss_pred HHHHHH-HHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073 83 AALTYY-WRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST 161 (402)
Q Consensus 83 ~~~~~~-~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (402)
.++.++ ..+++||+++- +++++++ . ... ++..+++ .++.....
T Consensus 171 ~~i~~i~~~~~~~~~~~~----~~~~~~~-----------------------~--~~~----~~~~~~~---~~~~~~~~ 214 (395)
T PRK10054 171 SAFPLVFIQIWVQRSEKA----IATETGS-----------------------V--WSP----SVLLQDK---ALLWFTCS 214 (395)
T ss_pred HHHHHHHHHHHHhccccc----cccchhh-----------------------h--hhh----hhhccCc---eehHHHHH
Confidence 666543 33445654211 0000000 0 000 1111111 12222222
Q ss_pred HHHHHHHHHHHHhhhhhhh---hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHH
Q 045073 162 WFLLDIAFYTINLAQKDIY---PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFL 238 (402)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~ 238 (402)
.+...........+.+.+. .+.+.+....+ .......+.........+++.||.++|+.+..+..
T Consensus 215 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~ 282 (395)
T PRK10054 215 GFLASFVSGAFASCISQYVMVVADSDFAEKVVA------------VVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTL 282 (395)
T ss_pred HHHHHHHHHHhhhhHHHHHHHhcccchHHHHHH------------HHHHhhhhheeeehhHHHHHHccCCchhHHHHHHH
Confidence 2221112222222333333 22333333222 14445555566666778899999999998888876
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHH
Q 045073 239 LMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAA 318 (402)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~ 318 (402)
+..++...+... .+......+.....+.+.....+.....+.+..|++.|++..+..+
T Consensus 283 ~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~- 340 (395)
T PRK10054 283 CFVIGLVGFIFS---------------------GNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS- 340 (395)
T ss_pred HHHHHHHHHHHc---------------------chHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-
Confidence 666665544432 1112222222233333333334456677889999999999988755
Q ss_pred HHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee
Q 045073 319 AGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF 361 (402)
Q Consensus 319 ~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~ 361 (402)
..++|..+||.+.+.+.++. +....|++.+++..+..++..
T Consensus 341 ~~~~G~~~Gp~~~G~l~~~~--g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 341 LGWLGAAINPLVSGVILTTL--PPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHc--ChhhHHHHHHHHHHHHHHHHH
Confidence 67789999999999999987 777777776665555444443
No 78
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.70 E-value=1.4e-15 Score=140.76 Aligned_cols=262 Identities=15% Similarity=0.187 Sum_probs=151.1
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
|...+++.|++|+++|++++++......+|..+++.+++.+. .++||+.|++.++.
T Consensus 118 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~------------------------~~g~~~~f~~~~~~ 173 (400)
T PRK11646 118 PPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL------------------------QYDFRLVCATGAVL 173 (400)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------HhhHHHHHHHHHHH
Confidence 345678899999999999999999999999999999998884 25899999987766
Q ss_pred HHHHH-HHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073 83 AALTY-YWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST 161 (402)
Q Consensus 83 ~~~~~-~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (402)
.++.. +..+++||.+. ++.+++..+ . ++. ..+++ .++.....
T Consensus 174 ~~~~~i~~~~~~~~~~~-----~~~~~~~~~-------------------------~----~~~-~~~~~--~~~~~~~~ 216 (400)
T PRK11646 174 FVLAAAFNAWLLPAYKL-----STVRTPVRE-------------------------G----MTR-VLRDK--RFVTYVLT 216 (400)
T ss_pred HHHHHHHHHHhCCcccc-----cccchhhHH-------------------------H----HHH-HHcCc--hHHHHHHH
Confidence 55543 33444565310 000000000 0 011 11111 11111111
Q ss_pred HHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhh-hccchhHHHHHHHHHH
Q 045073 162 WFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLI-DRIGRFIIQLGGFLLM 240 (402)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~-dr~grr~~~~~~~~~~ 240 (402)
.+...........+.|.+.++.+.++.+.+. ......+....+....+++. ||++.++.+..+..+.
T Consensus 217 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~------------l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 284 (400)
T PRK11646 217 LTGYYMLAVQVMLMLPIMVNDIAGSPSAVKW------------MYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIM 284 (400)
T ss_pred HHHHHHHHHHHHHhhhhhHHhhcCCchHHHH------------HHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Confidence 1222222223345678887776655554332 33333333333333344444 5566666666666655
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG 320 (402)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~ 320 (402)
+++..++... .+. ....+.....+.+.....+...++..+..|++.|+++.|+.+...
T Consensus 285 ~~~~~~l~~~---------------------~~~-~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~ 342 (400)
T PRK11646 285 SLSMFPIGMV---------------------SNL-QQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGL 342 (400)
T ss_pred HHHHHHHHHh---------------------hhH-HHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHH
Confidence 5555444332 111 122211122222222333455677889999999999999999999
Q ss_pred HHhHHHHhHhHHhhhhccCC-c-chhhHHHHHHHHHHHhhh
Q 045073 321 KAGAIVGAFGVQYYTQKGDK-Q-IKQSIITLAVVNFLGFLC 359 (402)
Q Consensus 321 ~~g~~i~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~i~~i~ 359 (402)
.+|..+||.+.+.+.+..+. + ...+++..++..+++.+.
T Consensus 343 ~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 343 ALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 99999999999999887521 2 335555555555555444
No 79
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.70 E-value=1.6e-15 Score=159.34 Aligned_cols=277 Identities=10% Similarity=-0.052 Sum_probs=160.7
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHH-hHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMF-GAV 81 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~-~~i 81 (402)
++..+++.|++|+++|++++++.+++..+|.++++.+++++....... +.....+|++.+.+ ..+
T Consensus 122 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~--------------~~~~~~~~~~~~~~~~~~ 187 (1146)
T PRK08633 122 PAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGN--------------TPSEILGRIAPAGLVLLA 187 (1146)
T ss_pred hHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccc--------------cccccccchHHHHHHHHH
Confidence 556789999999999999999999999999999999999886321100 00012234444444 333
Q ss_pred HHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073 82 PAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST 161 (402)
Q Consensus 82 ~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (402)
.+++.+++.+++||+|.... .+.+++.. ......++.++. .+++ +.++...+.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----------------------~~~~~~~~~~~~-l~~~--~~~~~~~~~ 240 (1146)
T PRK08633 188 VAVLGLIFAYRLPKVPAAAP--EVFDKKKY----------------------LFPKLLWRNLKL-LRSD--RVLWLAIIG 240 (1146)
T ss_pred HHHHHHHHHhcCcCCCCCCc--cccccccc----------------------ccHHHHHHHHHH-HhcC--cHHHHHHHH
Confidence 44445555566888875421 11000000 000000000111 1111 122222222
Q ss_pred HHHHHHHHHHHHhhhhhhhh-hcCcchh-hhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073 162 WFLLDIAFYTINLAQKDIYP-ATGIVRK-AAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL 239 (402)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~ 239 (402)
.+......+....+.|.++. .+|++.. ..+. +.....++.+++.++.+++.||+++++.+.++.++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~------------~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~ 308 (1146)
T PRK08633 241 LSYFWFISQLAQANFPAYAKEVLGLDNTFQVQY------------LLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALG 308 (1146)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHH------------HHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHH
Confidence 22222233344455666664 4777766 5444 66677788889999999999999998888777766
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073 240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA 319 (402)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 319 (402)
.+++.+++... .+. ...++..++.+++.....+...+++.+..|++.||+++|+.+.+
T Consensus 309 ~~~~~~~~~~~---------------------~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~ 366 (1146)
T PRK08633 309 LALSLFLLPTA---------------------PSL-ASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFL 366 (1146)
T ss_pred HHHHHHHHHHh---------------------hhH-HHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHH
Confidence 66665554442 111 22222222223323333445677888999999999999999999
Q ss_pred HHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHH
Q 045073 320 GKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFL 355 (402)
Q Consensus 320 ~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 355 (402)
..++.++++.+.+.+... +.++...+++.+.+.++
T Consensus 367 ~~lg~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 367 QNVGMLLFLALTTLFSGL-GLSPAGLFYLIALVTLI 401 (1146)
T ss_pred HHHHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHHH
Confidence 999988887766655432 11333445444444333
No 80
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.69 E-value=4.9e-15 Score=139.63 Aligned_cols=269 Identities=10% Similarity=0.026 Sum_probs=173.2
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
|.-.+++.|..|+++...+.++.++..++..++||.+++.+. ...|-.+.|++.++.
T Consensus 122 PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lv-----------------------a~~G~~~~f~inals 178 (524)
T PF05977_consen 122 PAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILV-----------------------AFFGAAAAFLINALS 178 (524)
T ss_pred HHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHH-----------------------HHHHHHHHHHHHHHH
Confidence 455788999999999999999999999999999999999987 335566778876655
Q ss_pred HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073 83 AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW 162 (402)
Q Consensus 83 ~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (402)
-++.++....++..+.- ++..++.-.+.+ ++-++.....+..+..+...+..
T Consensus 179 fl~~i~~l~~~~~~~~~---~~~~~e~~~~~l-------------------------~~G~ryv~~~~~l~~~l~~~~~~ 230 (524)
T PF05977_consen 179 FLISILALLRWKPPPPP---SSLPRERFFSAL-------------------------REGLRYVRSSPPLRSVLLRSFLF 230 (524)
T ss_pred HHHHHHHHHHccccccc---cccchhhhhhhH-------------------------HHHHHHHhcchHHHHHHHHHHHH
Confidence 44444333333322110 000000000000 01111111111111222222222
Q ss_pred HHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHH
Q 045073 163 FLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMS 241 (402)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~ 241 (402)
..........+|.+.+ .+|.++...++ +....+++.++|+++.+++.+|+++++++..+.++.+
T Consensus 231 ---~l~~~a~~aLlPl~a~~~l~~~a~~yGl------------l~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a 295 (524)
T PF05977_consen 231 ---NLFASAVWALLPLFARDVLGGGASGYGL------------LLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFA 295 (524)
T ss_pred ---HHhhhHHHHhhhHHHHHHhCCcHHHHHH------------HHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHH
Confidence 2222233344677765 47777776665 7788899999999999999999999888888887777
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHH
Q 045073 242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGK 321 (402)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 321 (402)
++++.+++. ...+...+..+..+++.........+...+..|++.||++.+++.+...
T Consensus 296 ~~~~~lal~----------------------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~ 353 (524)
T PF05977_consen 296 LALLLLALS----------------------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFF 353 (524)
T ss_pred HHHHHHhcc----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHH
Confidence 776666553 2222323333333333333444556777899999999999999999999
Q ss_pred HhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee
Q 045073 322 AGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF 361 (402)
Q Consensus 322 ~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~ 361 (402)
.+..+|..+.|.+.+.. +...++.+.++..+++.++.+
T Consensus 354 g~~~lGsll~G~la~~~--g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 354 GGMPLGSLLWGFLADHF--GVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988 777777777766666655544
No 81
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.67 E-value=5.9e-16 Score=145.10 Aligned_cols=295 Identities=13% Similarity=0.116 Sum_probs=189.5
Q ss_pred chhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHH
Q 045073 5 SAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAA 84 (402)
Q Consensus 5 ~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~ 84 (402)
+.+.+..++ +++|+.+.|+...+.++|..+-+.+.-.+. +..|||+.+++.+.+.+
T Consensus 156 aiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~-----------------------~~~G~r~~~l~~~~~~l 211 (509)
T KOG2504|consen 156 AVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLL-----------------------SKYGWRGALLIFGGISL 211 (509)
T ss_pred hhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHH-----------------------HHhCcHHHHHHHHHHHH
Confidence 344555444 589999999999999999999888888877 77899999998555555
Q ss_pred HHHHHHhh-ccCCchhHHhhhCChhHHHHHHHHhccc---ccccc---------------ccCCCCCCCCCc--cccc--
Q 045073 85 LTYYWRMK-MPETARYTALVEGNQKKAAVDMAKVLDT---DLTVA---------------TSAYPVPVSPEA--STYG-- 141 (402)
Q Consensus 85 ~~~~~~~~-~pesp~~l~~~~~~~~~~~~~~~~~~~~---~~~~~---------------~~~~~~~~~~~~--~~~~-- 141 (402)
-.++.... -|.+|+-. +. .+++.+........ +.+.. .+..++..++.. ....
T Consensus 212 ~~~~~~~~~rp~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (509)
T KOG2504|consen 212 NVLVAGALLRPLSPPKK---PN-EEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFL 287 (509)
T ss_pred HHHHHHHHcCCCCcCCC---ch-hhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhh
Confidence 44443333 34333220 11 11110000000000 00000 000000000000 1111
Q ss_pred -cchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhH
Q 045073 142 -LFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFT 220 (402)
Q Consensus 142 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 220 (402)
.+..+.++. +.++...+...+...+++....++|.+.++.|++..+... ...+.++..+++.++.
T Consensus 288 ~~~d~~ll~~--~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~------------l~Siigi~~i~gRi~~ 353 (509)
T KOG2504|consen 288 SMLDLSLLKD--PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAF------------LLSIIGVSDIIGRIIL 353 (509)
T ss_pred hhhhHHHHcC--chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHH------------HHHHHHHhhhhhhhhh
Confidence 111333333 3566666666777788899999999999999999887665 7888899999999999
Q ss_pred HHhhhccc--hhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccc
Q 045073 221 VFLIDRIG--RFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFI 298 (402)
Q Consensus 221 g~l~dr~g--rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (402)
|++.|+.. ++.+..++.+..+++.+.+... .+ ...++.+.+..++...........
T Consensus 354 G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~---------------------~~-~~~l~~~~~~fG~~~g~~~~l~~~ 411 (509)
T KOG2504|consen 354 GLLADKPGIRALVLFLLTLLIAGLARLFLPFA---------------------TT-YVGLIVFSILFGFCVGSFSSLTPV 411 (509)
T ss_pred hhhcCccccchHHHHHHHHHHHHHHHHHHHHh---------------------cc-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999987 4445555555555554333332 22 233444444444433344444446
Q ss_pred ccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeee
Q 045073 299 VPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVP 364 (402)
Q Consensus 299 ~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~ 364 (402)
.+.|+.+.+.-+.+.|+...+..++..+||.+.+.+.|..+ +|...|...+++.+++..+.+..+
T Consensus 412 i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg-~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 412 ILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITG-NYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccC-CeeeehhhcChHHHHHHHHHHHhH
Confidence 78999999999999999999999999999999999999885 588999999999888887777666
No 82
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.66 E-value=5.5e-15 Score=135.51 Aligned_cols=253 Identities=15% Similarity=0.123 Sum_probs=141.1
Q ss_pred cchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHH-HH-hHH
Q 045073 4 LSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVL-MF-GAV 81 (402)
Q Consensus 4 ~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f-~~-~~i 81 (402)
....+++|++|+++|++++++...+..+|..+++.++..+........+ .....+||+.| +. +.+
T Consensus 110 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~-------------~~~~~~w~~~~~~~~~~~ 176 (366)
T TIGR00886 110 SCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAG-------------LPAHLAWGWAFVIVPAGI 176 (366)
T ss_pred hHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccc-------------ccccccccchhHHHHHHH
Confidence 4567899999999999999999988888888888887766532211100 01245899999 44 333
Q ss_pred HHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073 82 PAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST 161 (402)
Q Consensus 82 ~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (402)
..++.++...+.+|+|+. ++++++. + ...+... .+++ ..+..++...++ .++...+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~----~~~~~~~-~---------~~~~~~~-----~~~~-~~~~~~~~~~~~---~~~~~~~~ 233 (366)
T TIGR00886 177 LLLPALLIFFVGADTPPG----KPATGKL-S---------FKGARWS-----VGTG-ALGDQLKVFRDR---HTWILALL 233 (366)
T ss_pred HHHHHHHHHHhcccCCcc----cccchhc-c---------ccccccc-----ccch-hHHHHHHHHhcc---chhhHHHH
Confidence 334444445556776642 1100000 0 0000000 0000 000011111111 23333333
Q ss_pred HHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073 162 WFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240 (402)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~ 240 (402)
.+......+....+.|.++++ +|+++.+.+. ......+..+++.++.|++.||+|||+.+..+....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------------~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~ 301 (366)
T TIGR00886 234 YSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGA------------YASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGV 301 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHH------------HHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHH
Confidence 333344555666777878754 6887766544 556667778888999999999999988777766555
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG 320 (402)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~ 320 (402)
..+..++..... .. .+.............+.+. ..+..+.+.++..| +.++++.|+.+..+
T Consensus 302 ~~~~~~~~~~~~---~~--------------~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~-~~~g~~~g~~~~~~ 362 (366)
T TIGR00886 302 AMGAFLVVLGLV---SP--------------LSLAVFIVLFVALFFFSGA-GNGSTFALVPHIFR-RATGAVSGLVGAIG 362 (366)
T ss_pred HHHHHHHHhcCC---Cc--------------chHHHHHHHHHHHHHHhcc-ccchhhhcchhhch-hhcccHHHHHHHhc
Confidence 554444333211 00 0122222222222222222 23456677788887 68999999998887
Q ss_pred HHh
Q 045073 321 KAG 323 (402)
Q Consensus 321 ~~g 323 (402)
++|
T Consensus 363 ~~g 365 (366)
T TIGR00886 363 NLG 365 (366)
T ss_pred cCC
Confidence 765
No 83
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.65 E-value=3.9e-14 Score=129.29 Aligned_cols=242 Identities=13% Similarity=0.075 Sum_probs=148.6
Q ss_pred cchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHH
Q 045073 4 LSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPA 83 (402)
Q Consensus 4 ~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~ 83 (402)
....++.|++| ++|++++++.+.+..+|..+++.++..+... ...+||+.|.+.++..
T Consensus 107 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~---------------------~~~~w~~~f~~~~~~~ 164 (355)
T TIGR00896 107 LLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQH---------------------SGGHWQQALAWWALPA 164 (355)
T ss_pred cchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------------hhhhHHHHHHHHHHHH
Confidence 44567788886 6899999999999999999999988877511 1124999988755544
Q ss_pred HHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHH
Q 045073 84 ALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWF 163 (402)
Q Consensus 84 ~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (402)
++... .++||+++. +++++ + ..+...++.+++ + ..+......+
T Consensus 165 ~~~~~--~~~~~~~~~-----~~~~~------------------~-----~~~~~~~~~~~~----~---~~~~~~~~~~ 207 (355)
T TIGR00896 165 LLALL--AWIPQVRRR-----VAANQ------------------T-----TTRLTPVRIWRS----P---LAWQVTVFFG 207 (355)
T ss_pred HHHHH--HHhhhhccc-----cCCCC------------------C-----CCCCCCchhhcC----H---hHHHHHHHHH
Confidence 43322 234443210 00000 0 000011111111 1 2233333334
Q ss_pred HHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhcc-chhHHHHHHHHHHHH
Q 045073 164 LLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRI-GRFIIQLGGFLLMSI 242 (402)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-grr~~~~~~~~~~~~ 242 (402)
.....++....+.|.++++.|++..+.+. ......++.++++++.|++.||+ +||+.+..+..+.++
T Consensus 208 ~~~~~~~~~~~~lp~~~~~~g~~~~~~g~------------~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 275 (355)
T TIGR00896 208 LQSGLYYSLIGWLPAILISHGASAATAGS------------LLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLV 275 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHH
Confidence 44456667777889999888888776554 67777888999999999999999 566666666666666
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccc-cccchhhhhhhHHHHHHH
Q 045073 243 CMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAEL-FPARLRSTCHGISAAAGK 321 (402)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~-~p~~~r~~~~~~~~~~~~ 321 (402)
+.+.+.... ... ... .....+.+.....+...+...+. .+++.++...++.+.++.
T Consensus 276 ~~~~~~~~~--------------------~~~-~~~--~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 332 (355)
T TIGR00896 276 GLCGLLFAP--------------------MHG-LWA--WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGY 332 (355)
T ss_pred HHHHHHHhh--------------------hhH-HHH--HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 554444321 111 111 11222222333334444444444 445777899999999999
Q ss_pred HhHHHHhHhHHhhhhccC
Q 045073 322 AGAIVGAFGVQYYTQKGD 339 (402)
Q Consensus 322 ~g~~i~~~~~~~~~~~~~ 339 (402)
++..++|.+.+.+.+..+
T Consensus 333 ~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 333 LLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999999998764
No 84
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.64 E-value=7.1e-14 Score=129.95 Aligned_cols=261 Identities=13% Similarity=0.005 Sum_probs=145.2
Q ss_pred chhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHH
Q 045073 5 SAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAA 84 (402)
Q Consensus 5 ~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~ 84 (402)
..+++.|++|+++|++++++...+..+|..+++.+++.+. +..+||+.|++.++..+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~-----------------------~~~gw~~~f~~~~~~~~ 181 (413)
T PRK15403 125 GYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALM-----------------------HFVHWKVLFAIIAVMGL 181 (413)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------HhcCHHHHHHHHHHHHH
Confidence 4567889999999999999999999999999999998876 45789999999777766
Q ss_pred HHHHH-HhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHH
Q 045073 85 LTYYW-RMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWF 163 (402)
Q Consensus 85 ~~~~~-~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (402)
+.++. .+++||+++. ++++.+.... ++.++ ...++ +.++...+...
T Consensus 182 i~~~~~~~~lp~~~~~----~~~~~~~~~~--------------------------~~~~~-~ll~~--~~~~~~~l~~~ 228 (413)
T PRK15403 182 IAFVGLLLAMPETVKR----GAVPFSAKSV--------------------------LRDFR-NVFRN--RLFLTGAATLS 228 (413)
T ss_pred HHHHHHHHhCCCCccc----cCCCCChHHH--------------------------HHHHH-HHHcC--HHHHHHHHHHH
Confidence 65543 4568887531 1110000000 00001 11121 23343444444
Q ss_pred HHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhh-hccchhHHHHHHHHHHH
Q 045073 164 LLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLI-DRIGRFIIQLGGFLLMS 241 (402)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~-dr~grr~~~~~~~~~~~ 241 (402)
......+....+.|.++++ .|.+..+.+. .......+.++++.+.+.+. |+.++|. ......+..
T Consensus 229 ~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl------------~~~~~~~~~~i~~~l~~~~~~~~~~~~~-~~~~~~~~~ 295 (413)
T PRK15403 229 LSYIPMMSWVAVSPVILIDAGGMTTSQFAW------------TQVPVFGAVIVANAIVARFVKDPTEPRF-IWRAVPIQL 295 (413)
T ss_pred HHHHHHHHHHHhChHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHhccCCchhH-HHHHHHHHH
Confidence 4455556666777888766 5788776554 44455566666666677665 4444443 322222222
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHH
Q 045073 242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGK 321 (402)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 321 (402)
++..++...... . . ...+.......+. +.+.....+......-. -....+|++.++.+....
T Consensus 296 ig~~l~~~~~~~-~-~--------------~~~~~~~~~~~l~-~~G~~~~~p~~~~~al~-~~~~~~G~a~a~~~~~~~ 357 (413)
T PRK15403 296 VGLALLIVGNLL-W-P--------------HVWLWSVLGTSLY-AFGIGLIFPTLFRFTLF-SNNLPKGTVSASLNMVIL 357 (413)
T ss_pred HHHHHHHHHHHH-c-c--------------ccHHHHHHHHHHH-HHHHHHHhHHHHHHHhc-cCCCCCcHHHHHHHHHHH
Confidence 332222221100 0 1 1111111211111 11111222223211111 112237999999999998
Q ss_pred HhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHH
Q 045073 322 AGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFL 355 (402)
Q Consensus 322 ~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 355 (402)
.+..+++...+++.+. +....|...+++..+
T Consensus 358 ~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~ 388 (413)
T PRK15403 358 MVMAVSVEIGRWLWFN---GGRLPFHLLAVVAGV 388 (413)
T ss_pred HHHHHHHHHHHHHHHc---CCchHHHHHHHHHHH
Confidence 8888999888888765 445555555544443
No 85
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.63 E-value=2.3e-14 Score=132.81 Aligned_cols=132 Identities=15% Similarity=0.004 Sum_probs=89.3
Q ss_pred HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073 205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT 284 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (402)
......+...++....+++.||+|||+.+.++..+.++...+.... .+.+.. .+....
T Consensus 259 ~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~---------------------~~~~~~-~~~~~l 316 (396)
T TIGR00882 259 VTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFA---------------------TTALEV-VILKML 316 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhc---------------------CChHHH-HHHHHH
Confidence 4555666777778889999999999999888877666655443321 122222 222222
Q ss_pred HHHHhhCCccccccccccccccchhhhhhhH-HHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhe
Q 045073 285 LFFANFGPNSTTFIVPAELFPARLRSTCHGI-SAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCS 360 (402)
Q Consensus 285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~-~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 360 (402)
.+............+..+..|++.++++.+. .+....+|+++++.+.+.+.+.. |+..+|.+.+++.+++.++.
T Consensus 317 ~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~--G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 317 HAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI--GFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc--ccHHHHHHHHHHHHHHHHHH
Confidence 2222111122334456777888888887776 56788999999999999999987 88999998888877665543
No 86
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.62 E-value=1.1e-13 Score=128.26 Aligned_cols=242 Identities=14% Similarity=0.109 Sum_probs=137.9
Q ss_pred chhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHH
Q 045073 5 SAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAA 84 (402)
Q Consensus 5 ~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~ 84 (402)
...+..|.+++++|+++.++.+.+..+|..+++.+++.+. +..+||+.|++.++..+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~-----------------------~~~g~~~~f~~~~~~~~ 173 (394)
T PRK11652 117 ARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLT-----------------------TLFGWRACYLFLLLLGA 173 (394)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------hccChHHHHHHHHHHHH
Confidence 3456788899999999999999999999999999998876 55789999998766555
Q ss_pred H-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHH
Q 045073 85 L-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWF 163 (402)
Q Consensus 85 ~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (402)
+ .++..+++||+|+. ++++.+..+.. +...+++..+..+...+.
T Consensus 174 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~-- 218 (394)
T PRK11652 174 GVTFSMARWMPETRPA----DARRTRVLASY-----------------------------RTLLSNRRFNCYLLMLIG-- 218 (394)
T ss_pred HHHHHHHHhCCccCcc----ccchhHHHHHH-----------------------------HHHHcChHHHHHHHHHHH--
Confidence 4 34445567887532 11111100000 111111111111211111
Q ss_pred HHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHH
Q 045073 164 LLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSI 242 (402)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~ 242 (402)
..........+.+.++++ +|.++...+. ......++.+++..+.+++.||++++.... .....+
T Consensus 219 -~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------------~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~--~~~~~~ 283 (394)
T PRK11652 219 -TLAGIAVFEACSGVLMGAVLGLSSMTVSI------------LFILPIPAAFFGAWFAGRPNKRFSTLMWQS--VICCLL 283 (394)
T ss_pred -HHHHHHHHHHhChHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH
Confidence 112222223344556655 7777665443 455566777777788888888887433322 222222
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHH
Q 045073 243 CMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKA 322 (402)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 322 (402)
+.+....... ... ... ..........+.+.....+...++..|.+| +.++++.++.+....+
T Consensus 284 ~~~~~~~~~~-~~~---------------~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~l 345 (394)
T PRK11652 284 AGLLMWIPGW-FGV---------------MNV-WTLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNI 345 (394)
T ss_pred HHHHHHHHHH-hcc---------------ccH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHH
Confidence 2222111111 000 111 222222222222223345566677778887 5789999999999999
Q ss_pred hHHHHhHhHHhhhhc
Q 045073 323 GAIVGAFGVQYYTQK 337 (402)
Q Consensus 323 g~~i~~~~~~~~~~~ 337 (402)
|+.+++.+.+.+...
T Consensus 346 g~~~~~~~~~~~~~~ 360 (394)
T PRK11652 346 GSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHHHHHccCC
Confidence 999999888877553
No 87
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.61 E-value=9e-14 Score=119.92 Aligned_cols=262 Identities=16% Similarity=0.139 Sum_probs=179.5
Q ss_pred chhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHH
Q 045073 5 SAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAA 84 (402)
Q Consensus 5 ~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~ 84 (402)
.+..+-+.+| |+-+..++++.+..++|..+++.+...+.. ...+||....+-+++++
T Consensus 120 LPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~----------------------~~~gW~~aL~~WAl~al 176 (395)
T COG2807 120 LPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQ----------------------HSGGWRGALGFWALLAL 176 (395)
T ss_pred hhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHH----------------------hhccHHHHHHHHHHHHH
Confidence 4667788888 566999999999999999999999988862 22579999999888988
Q ss_pred HHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHHH
Q 045073 85 LTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFL 164 (402)
Q Consensus 85 ~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (402)
+.++.++ |...|. +....+ .+..+..+++++ +..+.+.+.+-.
T Consensus 177 lAl~~Wl--Pq~~r~-----~~~~~~-----------------------~~~~~~~~vw~~-------~~aW~vtLfmGl 219 (395)
T COG2807 177 LALLIWL--PQALRE-----QAASIA-----------------------TKLVSVRKVWRS-------PLAWQVTLFMGL 219 (395)
T ss_pred HHHHHHh--hhcccc-----cccccc-----------------------cccccccccccC-------chhHHHHHHHHh
Confidence 8877643 332211 000000 111111122222 256666777777
Q ss_pred HHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccc-hhHHHHHHHHHHHHH
Q 045073 165 LDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIG-RFIIQLGGFLLMSIC 243 (402)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g-rr~~~~~~~~~~~~~ 243 (402)
++..+|....|+|.++.+.|+|..+++. ...+..+.+++.++....+.+|.. +|+.......++.++
T Consensus 220 qS~~~Y~~~~WLP~ili~~G~sa~~aG~------------llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G 287 (395)
T COG2807 220 QSLLYYIVIGWLPAILIDRGLSAAEAGS------------LLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVG 287 (395)
T ss_pred hHHHHHHHHHHHHHHHHHcCCCHHHhhh------------HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Confidence 8889999999999999999999998776 778888889999999999999754 566666555555555
Q ss_pred HHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccccccccc-ccchhhhhhhHHHHHHHH
Q 045073 244 MAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELF-PARLRSTCHGISAAAGKA 322 (402)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~ 322 (402)
.+.+.+.. . ...+.+. +..+.+..+.++...+.+.... .++..+.-.|+.+.++++
T Consensus 288 ~~G~~~~P----~---------------~~~~lw~----~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYl 344 (395)
T COG2807 288 LVGLLLAP----G---------------QLPILWA----LLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYL 344 (395)
T ss_pred HHHHHHhh----h---------------hHHHHHH----HHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHH
Confidence 54444321 0 1222221 2222223344444444444443 345567778999999999
Q ss_pred hHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheee
Q 045073 323 GAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM 362 (402)
Q Consensus 323 g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~ 362 (402)
-..+||.++|.+.|..+ +|...+..+++..++..+.-+.
T Consensus 345 lAa~GP~l~G~lhDa~g-sw~~~~~~l~~~~i~m~i~Gl~ 383 (395)
T COG2807 345 LAAFGPWLFGFLHDATG-SWSAPLVLLALATLLMLIFGLR 383 (395)
T ss_pred HHhhhhhhHhHHHHhcC-ChHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999987 8888888777777666655543
No 88
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.61 E-value=2.9e-14 Score=132.59 Aligned_cols=183 Identities=12% Similarity=0.010 Sum_probs=135.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhH
Q 045073 152 GLHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFI 231 (402)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~ 231 (402)
++.+...++.++.............|.+.+++|++..+.+. ......++..++.+..|++.||+|||+
T Consensus 7 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~------------~~s~~~~~~~~~~~~~g~l~dr~G~r~ 74 (412)
T TIGR02332 7 RRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGL------------AATLFYAAYVICGIPSNIMLAIIGARR 74 (412)
T ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHH------------HHHHHHHHHHHHHhhHHHHHHHhChHH
Confidence 34555666666666666667777778888899999887666 677777888888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhh
Q 045073 232 IQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRST 311 (402)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 311 (402)
++..+.++.+++.++..+. .+ ...+.+.....+.+..+..+....++.|.+|++.|++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~---------------------~~-~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~ 132 (412)
T TIGR02332 75 WIAGIMVLWGIASTATMFA---------------------TG-PESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRAR 132 (412)
T ss_pred HHHHHHHHHHHHHHHHHHh---------------------cC-HHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHH
Confidence 9999988888877776653 22 2333333444444444455666778899999999999
Q ss_pred hhhHHHHHHHHhHHHHhHhHHhhhhcc----CCcchhhHHHHHHHHHHHhhhe-eeeeccCC
Q 045073 312 CHGISAAAGKAGAIVGAFGVQYYTQKG----DKQIKQSIITLAVVNFLGFLCS-FMVPETNG 368 (402)
Q Consensus 312 ~~~~~~~~~~~g~~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~i~~-~~~~et~~ 368 (402)
+.++.+....+|..+++.+.+.+.+.. ..+|++.|.+.++..++..++. +++||++.
T Consensus 133 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 133 ANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 999999999999999999888776420 0189999999888776654444 45577654
No 89
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.60 E-value=2.6e-13 Score=125.76 Aligned_cols=280 Identities=9% Similarity=-0.055 Sum_probs=153.8
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcc-ccccccc--ccCCCCCchhHHHHHHh
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPA-FNRNHVL--SAQPQGDYLWRIVLMFG 79 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~Wr~~f~~~ 79 (402)
+....++.+..|+++|++.+++.+...++|..+++.++..+........+.+. ....|.. .....+..+||++|++.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~ 192 (410)
T TIGR00885 113 TAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMII 192 (410)
T ss_pred hhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567888999999999999999999999999999998887532100000000 0000000 00000235799999886
Q ss_pred HHHHHHHHHHHhh--ccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHH
Q 045073 80 AVPAALTYYWRMK--MPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLG 157 (402)
Q Consensus 80 ~i~~~~~~~~~~~--~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (402)
++..++..+...+ +||.++ +++++. + ..+. .+...+++ .+..
T Consensus 193 a~~~~~~~~~~~~~~~p~~~~------~~~~~~-----------------------~----~~~~-~~~~~~~~--~~~~ 236 (410)
T TIGR00885 193 GAVVLAVALLIMLTKMPALNH------SDAKQI-----------------------S----FSAS-LSRLARIR--HYRE 236 (410)
T ss_pred HHHHHHHHHHHHHhcCCCCCc------cccccc-----------------------c----chhh-HHHHHhCh--hHHH
Confidence 6655544333322 443211 000000 0 0000 11111111 1222
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHH
Q 045073 158 TTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGF 237 (402)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~ 237 (402)
.....+...........+++.+.++.+...+. + .+............+|+++++++.||+++|+++.++.
T Consensus 237 ~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~-~---------~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~ 306 (410)
T TIGR00885 237 GVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTA-G---------FAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYA 306 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCH-H---------HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 22223333333444556777777654322211 1 1111334444667889999999999999999888877
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHH
Q 045073 238 LLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISA 317 (402)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~ 317 (402)
.+..++.++.... .+... ...+.....+ ....+|..++...+..+++.+..+.++..
T Consensus 307 ~~~~~~~ll~~~~---------------------~~~~~-~~~l~~~glf-~s~~fp~i~sl~~~~~g~~~~~~s~~l~~ 363 (410)
T TIGR00885 307 IIGMALCLGSIFA---------------------GGHVG-LYCLTLCSAF-MSLMFPTIYGIALKGLGQDTKYGAAGLVM 363 (410)
T ss_pred HHHHHHHHHHHHc---------------------CChHH-HHHHHHHHHH-HHHHHHHHHHHHHhhhhhhhhhhHHHHHH
Confidence 7666665554442 12122 2222222233 33445788889999999877655555555
Q ss_pred HHHHHhHHHHhHhHHhhhhccC---C-cchhhHHHHHHHH
Q 045073 318 AAGKAGAIVGAFGVQYYTQKGD---K-QIKQSIITLAVVN 353 (402)
Q Consensus 318 ~~~~~g~~i~~~~~~~~~~~~~---~-~~~~~~~~~~~~~ 353 (402)
.. +|+.+.|.+.|.+.|..+ . +.+..|++..++.
T Consensus 364 ~~--~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~ 401 (410)
T TIGR00885 364 AI--IGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCF 401 (410)
T ss_pred HH--hccchHHHHHHHHHHHhcccccCccchHHHHHHHHH
Confidence 44 899999999999999531 0 3556666544433
No 90
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.60 E-value=1.4e-15 Score=135.04 Aligned_cols=261 Identities=14% Similarity=0.109 Sum_probs=143.2
Q ss_pred CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073 2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV 81 (402)
Q Consensus 2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i 81 (402)
.|+++++++|.+|..+|++++++++.+.++|..+|.+.+..+.. ....|||.|...++
T Consensus 139 ~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~----------------------~~~~Wr~af~~~av 196 (493)
T KOG1330|consen 139 SPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVAS----------------------LTFWWRWAFRGSAV 196 (493)
T ss_pred cccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeecc----------------------CccceEEEEEeehH
Confidence 36789999999999999999999999999999999998887752 22239999999777
Q ss_pred HHHHH-HHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhh-hhHHHHHHH
Q 045073 82 PAALT-YYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQK-HGLHLLGTT 159 (402)
Q Consensus 82 ~~~~~-~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 159 (402)
++++. ++.+++++|.+|- .+++. +...+......+.++..+.....+ .....+...
T Consensus 197 l~vi~~~L~~~f~~eP~rg------a~~~~----------------~~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~ 254 (493)
T KOG1330|consen 197 LGVIVGLLVFLFVREPERG------ARDEV----------------DGENKMVKPFTSVWKDLKVLAKIKVFVLSSLGII 254 (493)
T ss_pred HHHHHHHHHHhhccCcccc------ccccc----------------ccCCcCCCCccchHHHHHHHHccCceeeehHHHH
Confidence 77764 4455667775431 11110 000000112223333333332211 111222222
Q ss_pred HHHHHHHHHHHHHHhhhhhhh----hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchh----H
Q 045073 160 STWFLLDIAFYTINLAQKDIY----PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRF----I 231 (402)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr----~ 231 (402)
...+.. -+...|.|.+. +-.|.+... +.++..+...++.+|.+++|.++||+.|+ .
T Consensus 255 a~~fv~----Gs~sww~p~~~~~~~~~~~~~~~~------------~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~ 318 (493)
T KOG1330|consen 255 AAQFVI----GSLSWWAPAFIYYSYELIGFDHNA------------TLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSG 318 (493)
T ss_pred HHHHhc----cccchhhhhHHHHHHHHhCCcccc------------chhhhhHHHhhchhhheehHHHHHHHHHhccccc
Confidence 222222 22233334333 224444332 23367777888888999999999995332 1
Q ss_pred HHHHHHHHHHHH----HHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccc
Q 045073 232 IQLGGFLLMSIC----MAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPAR 307 (402)
Q Consensus 232 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 307 (402)
......+..+.+ ...+..... ... ...+..++++.+........+ +...-+..|+.|++
T Consensus 319 ~~~~~q~~~~~g~~~s~~~L~~~~~--~~~--------------~s~~~~~il~~~g~~~~~~~~-a~n~~i~l~vV~p~ 381 (493)
T KOG1330|consen 319 TLRASQLSAALGAPLSIPFLFLFPA--FTS--------------SSMIFGLILFLVGETISWFNW-ATNNPIFLEVVPPS 381 (493)
T ss_pred chhHHHHHHhhhhhHHHHHHHHHHh--hhh--------------HHHHHHHHHHHHHHHHHhccc-ccccceeeEecCcc
Confidence 111111111111 111111110 000 222222232222222222233 34445668899999
Q ss_pred hhhhhhhHHHHHHHHhH-HHHhHhHHhhhhccC
Q 045073 308 LRSTCHGISAAAGKAGA-IVGAFGVQYYTQKGD 339 (402)
Q Consensus 308 ~r~~~~~~~~~~~~~g~-~i~~~~~~~~~~~~~ 339 (402)
.|.++.++...+..+.+ +-+|.+.|.+.++..
T Consensus 382 ~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~ 414 (493)
T KOG1330|consen 382 RRTTAYALDTVFEHIFGDAASPYIVGILSDKLR 414 (493)
T ss_pred cccHHHHHHHHHHHHhccCCCcceehhHHHHhh
Confidence 99999999888877644 455668888887654
No 91
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.59 E-value=1.6e-14 Score=127.04 Aligned_cols=183 Identities=11% Similarity=0.085 Sum_probs=146.4
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhh
Q 045073 145 KEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLI 224 (402)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~ 224 (402)
+.++|.+++.++.+++.+......--.+..-.|.+.++.|++..+.+. +.+...+..-++.++.|.++
T Consensus 21 ~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~------------i~s~f~i~YG~sKf~~G~~s 88 (448)
T COG2271 21 KTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGI------------LGSAFSITYGVSKFVMGVLS 88 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHhhhhc
Confidence 344445555667777777777777777788889999999999998776 67777788888888999999
Q ss_pred hccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccccccccc
Q 045073 225 DRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELF 304 (402)
Q Consensus 225 dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 304 (402)
||.+.|..+.++++++++..+++++. ++...+.++....+.+...-.|.+...++..+
T Consensus 89 Dr~npr~fm~~gLilsai~nil~Gfs----------------------~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wf 146 (448)
T COG2271 89 DRSNPRYFMAFGLILSAIVNILFGFS----------------------PSLFLFAVLWVLNGWFQGMGWPPCARTITHWF 146 (448)
T ss_pred ccCCCceeehHHHHHHHHHHHHHhhh----------------------hHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHc
Confidence 99999999999999999999988884 33444444444555545545567778889999
Q ss_pred ccchhhhhhhHHHHHHHHhHHHHhHhH--HhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073 305 PARLRSTCHGISAAAGKAGAIVGAFGV--QYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 305 p~~~r~~~~~~~~~~~~~g~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 363 (402)
|++.||+..++-++..++|+.+.|.+. +....+. +|+..|++-++++++..++.+++
T Consensus 147 sr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~--~w~~~f~~pgiiaiival~~~~~ 205 (448)
T COG2271 147 SRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG--GWRAAFYFPGIIAIIVALILLFL 205 (448)
T ss_pred CccccCceEEEehhhhhcccchHHHHHHHHHHHhcc--chhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999888 7777776 89999999999888766666654
No 92
>PRK10133 L-fucose transporter; Provisional
Probab=99.59 E-value=3.1e-13 Score=126.35 Aligned_cols=283 Identities=11% Similarity=-0.023 Sum_probs=154.4
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCccc-ccccccccCCCC--CchhHHHHHH-
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAF-NRNHVLSAQPQG--DYLWRIVLMF- 78 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~Wr~~f~~- 78 (402)
+.+..++.|+.|+++|++.+++.+..+.+|..+++.++..+.....+....+.. ...+........ ..+||++|+.
T Consensus 136 ~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~ 215 (438)
T PRK10133 136 TAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMII 215 (438)
T ss_pred hhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHH
Confidence 455778889888888878899999999999999999987664110000000000 000000000000 0367777764
Q ss_pred hHHHHHHHHHH-HhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHH
Q 045073 79 GAVPAALTYYW-RMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLG 157 (402)
Q Consensus 79 ~~i~~~~~~~~-~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (402)
..+..++.++. ...+||.|.- ++ .++. .....+..+ +..+++ .+..
T Consensus 216 ~~v~~~~~~~~~~~~~p~~~~~----~~-~~~~-------------------------~~~~~~~~~-~ll~~~--~~~~ 262 (438)
T PRK10133 216 VAIVLLVALLIMLTKFPALQSD----NH-SDAK-------------------------QGSFSASLS-RLARIR--HWRW 262 (438)
T ss_pred HHHHHHHHHHHHHhcCCCCCcc----cc-cccc-------------------------ccchhhhHH-HHHhCc--hHHH
Confidence 33333333222 3335543210 00 0000 000000001 111111 1111
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhh-h-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHH
Q 045073 158 TTSTWFLLDIAFYTINLAQKDIY-P-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLG 235 (402)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~-~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~ 235 (402)
..+..++.....++...|.+.++ + ..|.++.+.+. ......++.++|+++++++.||+|||+++..
T Consensus 263 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~------------~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~ 330 (438)
T PRK10133 263 AVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAAN------------YLTGTMVCFFIGRFTGTWLISRFAPHKVLAA 330 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 22222333334444445666663 4 47888887665 7788888999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhH
Q 045073 236 GFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGI 315 (402)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~ 315 (402)
+..+..+.+.+.... ..... ... ....+++.....|..++...+.+|++ .+++.++
T Consensus 331 ~~~~~~~~~~~~~~~---------------------~~~~~-~~~-~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l 386 (438)
T PRK10133 331 YALIAMALCLISAFA---------------------GGHVG-LIA-LTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSF 386 (438)
T ss_pred HHHHHHHHHHHHHHc---------------------CChHH-HHH-HHHHHHHHHHHHHHHHHHHHcccchh-hccchhH
Confidence 766655444333221 11111 112 22233334555678888888888764 5777777
Q ss_pred HHHHHHHhHHHHhHhHHhhhhccCCc-chhhHHHHHHHHHHHh
Q 045073 316 SAAAGKAGAIVGAFGVQYYTQKGDKQ-IKQSIITLAVVNFLGF 357 (402)
Q Consensus 316 ~~~~~~~g~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ 357 (402)
.. ...+|+.++|.+.+.+.+.. + .+..|++..++.+...
T Consensus 387 ~~-~~~~g~~~~~~i~G~l~~~~--g~~~~~~~v~~~~~~~~~ 426 (438)
T PRK10133 387 IV-MTIIGGGIVTPVMGFVSDAA--GNIPTAELIPALCFAVIF 426 (438)
T ss_pred Hh-HHhccchHHHHHHHHHHHhc--cchHHHHHHHHHHHHHHH
Confidence 76 45578888999999988876 5 6667765554444333
No 93
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.59 E-value=3.7e-14 Score=138.32 Aligned_cols=181 Identities=14% Similarity=0.055 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHH
Q 045073 153 LHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFII 232 (402)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~ 232 (402)
..++.+.+..+........+...+|.+..++|.+..+.+. +.+...++.++|.+++|+++||+|||+.
T Consensus 167 ~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~------------l~s~~~lG~iiG~li~G~LsDR~GRR~~ 234 (742)
T TIGR01299 167 ALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGM------------LGLIVYLGMMVGAFFWGGLADKLGRKQC 234 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCcHHH
Confidence 3334444444444444445566678887888888776554 6677788899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhh
Q 045073 233 QLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTC 312 (402)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~ 312 (402)
++++.++.+++.++.++. .+ ...+++..++.+++..+..+...+++.|.+|++.|+..
T Consensus 235 lii~lil~~i~~ll~afa---------------------~s-~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~ 292 (742)
T TIGR01299 235 LLICLSVNGFFAFFSSFV---------------------QG-YGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEH 292 (742)
T ss_pred HHHHHHHHHHHHHHHHHH---------------------hh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence 999888777776665543 12 23333344444444455567888999999999999999
Q ss_pred hhHHHHHHHHhHHHHhHhHHhhhhccC-----------CcchhhHHHHHHHHHHHhhheeeeeccC
Q 045073 313 HGISAAAGKAGAIVGAFGVQYYTQKGD-----------KQIKQSIITLAVVNFLGFLCSFMVPETN 367 (402)
Q Consensus 313 ~~~~~~~~~~g~~i~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~i~~i~~~~~~et~ 367 (402)
.++...+..+|.++++.+...+....+ .+|++.+++.++..++.+++.+++||+.
T Consensus 293 ~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESP 358 (742)
T TIGR01299 293 LSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESP 358 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 999999999999988876655543221 1678888887777777766666779874
No 94
>TIGR00895 2A0115 benzoate transport.
Probab=99.58 E-value=2.9e-14 Score=132.12 Aligned_cols=179 Identities=19% Similarity=0.181 Sum_probs=129.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073 154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ 233 (402)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~ 233 (402)
.+.......+...........+.|.+.+++|.+..+.+. ......++.+++.++.|+++||+|||+.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~g~l~d~~g~~~~~ 85 (398)
T TIGR00895 18 AIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGF------------LFSAGLIGMAFGALFFGPLADRIGRKRVL 85 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHH------------HHHHHHHHHHHHHHHhHHHHHHhhhHHHH
Confidence 344444445555555566667788888889988876554 66677788889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073 234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH 313 (402)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 313 (402)
..+.++.+++.++.... .+ .....+.....+.+.....+...++..|.+|++.|+++.
T Consensus 86 ~~~~~~~~~~~~~~~~~---------------------~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~ 143 (398)
T TIGR00895 86 LWSILLFSVFTLLCALA---------------------TN-VTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAV 143 (398)
T ss_pred HHHHHHHHHHHHHHHHc---------------------cc-hHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhH
Confidence 98887777766655542 12 223333333334434445567788899999999999999
Q ss_pred hHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhe-eeeeccCC
Q 045073 314 GISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCS-FMVPETNG 368 (402)
Q Consensus 314 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~-~~~~et~~ 368 (402)
++......+|..+++.+.+.+.+.. +|+..+++.+++.++..++. .++||+..
T Consensus 144 ~~~~~~~~~g~~~~~~~~~~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (398)
T TIGR00895 144 GLMFCGYPIGAAVGGFLAGWLIPVF--GWRSLFYVGGIAPLLLLLLLMRFLPESID 197 (398)
T ss_pred hhHhhHHHHHHHHHHHHHHHHhhcc--cceeehhhhhhHHHHHHHHHHHhCCCCCh
Confidence 9999999999999999999888776 88888888765555444443 34576543
No 95
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.57 E-value=3e-13 Score=128.07 Aligned_cols=258 Identities=11% Similarity=-0.004 Sum_probs=140.5
Q ss_pred hhhhhhcc-CcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHH
Q 045073 6 AVIMSEYA-NKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAA 84 (402)
Q Consensus 6 ~~~i~e~~-~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~ 84 (402)
.+++.|.. ++++|.+..+....+..+|..+.+.+...+...++. .....+|+....+.++..+
T Consensus 128 ~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~----------------~~~~~g~~~~~~i~~~~~~ 191 (473)
T PRK10429 128 WSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGG----------------GDRGFGFQMFTLVLIAFFI 191 (473)
T ss_pred HhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----------------CchhhhHHHHHHHHHHHHH
Confidence 35778988 689999999987777788776666655544322221 1133478888877666555
Q ss_pred HHHHH-HhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHH
Q 045073 85 LTYYW-RMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWF 163 (402)
Q Consensus 85 ~~~~~-~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (402)
+..+. .+..+|.+.. . +.+.++ +++...++.++.. +++ +.+.......+
T Consensus 192 ~~~~~~~~~~~e~~~~--~-~~~~~~------------------------~~~~~~~~~~~~~-~~n--~~~~~ll~~~~ 241 (473)
T PRK10429 192 VSTIITLRNVHEVYSS--D-NQVSAE------------------------GSHLTLKDIVALI-YKN--DQLSCLLGMAL 241 (473)
T ss_pred HHHHHHHcCceecCCc--c-cccccc------------------------ccCCCHHHHHHHH-hcC--HHHHHHHHHHH
Confidence 54333 3346664311 0 000000 0011111122111 111 22333333333
Q ss_pred HHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHH
Q 045073 164 LLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSIC 243 (402)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~ 243 (402)
......+....+.+.+.+....+....+ .......+..+++.++.+++.||+|+|+.+..+..+..++
T Consensus 242 ~~~~~~~~~~~~~~y~~~y~~~~~~~~~------------~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~ 309 (473)
T PRK10429 242 AYNIASNIINGFAIYYFTYVIGDADLFP------------YYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLS 309 (473)
T ss_pred HHHHHHHHHhhheeeEEEEECCCHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 3334444444455555554332322211 1444555677788889999999999999988777665554
Q ss_pred HHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccc-------cchhhhhhhHH
Q 045073 244 MAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFP-------ARLRSTCHGIS 316 (402)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~~~~~~ 316 (402)
.+.+..... .. . .+.+. ..+.....+..........+++.+|..+ .+..|...|..
T Consensus 310 ~~~~~~~~~-~~-~--------------~~~~~-~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~ 372 (473)
T PRK10429 310 CGVLLLMGL-AA-P--------------HNALL-IVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQ 372 (473)
T ss_pred HHHHHHHhc-cC-c--------------hhHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHH
Confidence 444332211 01 1 12222 2222222222233334566777888855 33345678888
Q ss_pred HHHHHHhHHHHhHhHHhhhhcc
Q 045073 317 AAAGKAGAIVGAFGVQYYTQKG 338 (402)
Q Consensus 317 ~~~~~~g~~i~~~~~~~~~~~~ 338 (402)
.....++..+++.+.+.+.+..
T Consensus 373 ~~~~K~~~al~~~i~g~~l~~~ 394 (473)
T PRK10429 373 TMVVKGGSAFAAFFIGVVLGLI 394 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999998887655
No 96
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.56 E-value=1.2e-13 Score=129.42 Aligned_cols=176 Identities=11% Similarity=0.086 Sum_probs=128.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHH
Q 045073 155 LLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQL 234 (402)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~ 234 (402)
.....+.++......+....+.|.+.+++|++..+.+. ......++..++.++.|++.||+|||+++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~ 92 (434)
T PRK11663 25 LITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGL------------LATLFYITYGVSKFVSGIVSDRSNARYFMG 92 (434)
T ss_pred HHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHhhhhHHHhhcCCchhHH
Confidence 33444445554455556677889999999999887665 667778888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhh
Q 045073 235 GGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHG 314 (402)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~ 314 (402)
++.++.+++.++.... .+. ..+.+..+..+.......+....++.|.+|++.|+++.+
T Consensus 93 ~~~~~~~~~~~~~~~~---------------------~~~-~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~ 150 (434)
T PRK11663 93 IGLIATGIINILFGFS---------------------SSL-WAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWA 150 (434)
T ss_pred HHHHHHHHHHHHHHHH---------------------hHH-HHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHH
Confidence 9988888877766553 222 222222222233233334566778899999999999999
Q ss_pred HHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhh-eeeeecc
Q 045073 315 ISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLC-SFMVPET 366 (402)
Q Consensus 315 ~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~-~~~~~et 366 (402)
+.+....+|..+++.+.+.+.+.. +|++.|.+.+++.++..+. .++++|+
T Consensus 151 ~~~~~~~~g~~~~~~~~~~l~~~~--gw~~~f~~~~i~~~~~~~~~~~~~~~~ 201 (434)
T PRK11663 151 IWNTAHNVGGALIPLVVGAIALHY--GWRYGMMIAGIIAIVVGLFLCWRLRDK 201 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcc--cHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999888876 8999998887766544333 3344554
No 97
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.56 E-value=9e-14 Score=129.23 Aligned_cols=183 Identities=17% Similarity=0.163 Sum_probs=135.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchh
Q 045073 151 HGLHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRF 230 (402)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr 230 (402)
+++.+....+.++......+......|.+.+++|.+..+.+. ......++..++.++.|+++||+|||
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~------------~~~~~~~~~~~~~~~~G~l~Dr~g~r 77 (405)
T TIGR00891 10 QWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAAS------------LISAALISRWFGALMFGLWGDRYGRR 77 (405)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHH------------HHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 334566666667777777777777888888899999887665 66777888889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhh
Q 045073 231 IIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRS 310 (402)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 310 (402)
+.+..+.++.+++.++.... .+ ...+.+..+..+.+.....+...+++.|.+|++.|+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~---------------------~~-~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~ 135 (405)
T TIGR00891 78 LPMVTSIVLFSAGTLACGFA---------------------PG-YITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRN 135 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHh---------------------cc-HHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhh
Confidence 99998888777776665542 12 223333334444434445556777889999999999
Q ss_pred hhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccC
Q 045073 311 TCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETN 367 (402)
Q Consensus 311 ~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~ 367 (402)
.+.++.+....+|.++++.+.+.+.+..+.+|+..|.+.++..++..+....+||++
T Consensus 136 ~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~ 192 (405)
T TIGR00891 136 KASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWLRKNIPEAE 192 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 999999999999999999988888776522488888876666655555444557754
No 98
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.56 E-value=1.4e-12 Score=118.61 Aligned_cols=254 Identities=14% Similarity=0.057 Sum_probs=158.4
Q ss_pred hhhhhccC-cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHHH
Q 045073 7 VIMSEYAN-KRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAAL 85 (402)
Q Consensus 7 ~~i~e~~~-~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~~ 85 (402)
++..|+.+ ++||.+..+.-+.+..+|.++...+...+...++++ +...||+....+.++.+++
T Consensus 135 al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~----------------~~~~g~~~~~~~~~vi~~i 198 (467)
T COG2211 135 ALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGG----------------DKALGYQGTALVLGVIGVI 198 (467)
T ss_pred hcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------cchhhHHHHHHHHHHHHHH
Confidence 45566664 689999999999999999999988888887666542 2367999998887777666
Q ss_pred HHHHHhh-ccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHHH
Q 045073 86 TYYWRMK-MPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFL 164 (402)
Q Consensus 86 ~~~~~~~-~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (402)
..+.+++ .+|.+.- ....++ ..+....+.+..-..+|. +...+...++
T Consensus 199 ~~l~~~~~v~ER~~~----~~~~~~------------------------~~~~~~~~~~~~~~~Nrp---~~~~l~~~l~ 247 (467)
T COG2211 199 LLLFCFFNVKERVVE----TQPTKT------------------------GVKLKLKDSFLLIFKNRP---LLLLLLMNLL 247 (467)
T ss_pred HHHHHHHHhhcccCc----cccCcc------------------------cccccHHHHHHHHHccch---HHHHHHHHHH
Confidence 5555444 6664321 000000 000111111111122222 2222223333
Q ss_pred HHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHH
Q 045073 165 LDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSIC 243 (402)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~ 243 (402)
.............+|.+. +|.+...... .......+.+++.++..++++|+|+|+++.++.++..++
T Consensus 248 ~~~~~~i~~s~~~yy~~y~lg~~~l~~~~------------~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~ 315 (467)
T COG2211 248 LFIAFNIRGSIMVYYVTYVLGDPELFAYL------------LLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVG 315 (467)
T ss_pred HHHHHHHHhhhhheeEEEEcCChHHHHHH------------HHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHH
Confidence 333333333344444443 4444443222 455556666666889999999999999999998888877
Q ss_pred HHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccc-------cchhhhhhhHH
Q 045073 244 MAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFP-------ARLRSTCHGIS 316 (402)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~~~~~~ 316 (402)
.+.+.+.. .+...++++..+....+.....+..|++.+|... .+.-|...|..
T Consensus 316 ~~~~~f~~--------------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~ 375 (467)
T COG2211 316 YLLLYFTP--------------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGM 375 (467)
T ss_pred HHHHHhhc--------------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHH
Confidence 77666642 2233444444444445556667789999998853 34446778888
Q ss_pred HHHHHHhHHHHhHhHHhhhhccC
Q 045073 317 AAAGKAGAIVGAFGVQYYTQKGD 339 (402)
Q Consensus 317 ~~~~~~g~~i~~~~~~~~~~~~~ 339 (402)
.++..+|.+++..+.++.....+
T Consensus 376 tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 376 TFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999998887664
No 99
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.56 E-value=1.6e-12 Score=120.66 Aligned_cols=330 Identities=12% Similarity=-0.021 Sum_probs=193.8
Q ss_pred chhhhhhccCcccc--hhHHHHHHHHHHHHHHHHHHHHHHHH--hhhhccccCcccccccccccCCCCCchhHHHHHHhH
Q 045073 5 SAVIMSEYANKRTR--GAFIAAVFAMQGMGILFAGVISLIFS--GIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGA 80 (402)
Q Consensus 5 ~~~~i~e~~~~~~R--g~~~~~~~~~~~lG~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~ 80 (402)
..++++|.+|+++| +.+.++.+.+.++|.++++.+++... ..++....+ .+ ...-.+-|..|++.+
T Consensus 135 ~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~--------~~--~~~~~~~~~~F~i~a 204 (477)
T TIGR01301 135 CRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTE--------AC--GVSCANLKSCFLIDI 204 (477)
T ss_pred HHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccccc--------cc--ccccchHHHHHHHHH
Confidence 46789999998865 68999999999999999999998752 111110000 00 001236799999977
Q ss_pred HHHHHHHH-HHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHH
Q 045073 81 VPAALTYY-WRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTT 159 (402)
Q Consensus 81 i~~~~~~~-~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (402)
+..++..+ ..++++|.|-. . +++.+++ +.++.++. +.+....+.+ ...++..+.+..++
T Consensus 205 ~~l~i~~l~t~~~v~E~~~~--~-~~~~~~~--------------~~~~~~~~-~~~~~~~~i~--~~~~~mP~~m~~l~ 264 (477)
T TIGR01301 205 ILLAILTYIALSAVKENPLI--G-SDDFINS--------------EAAPPSKH-GEEAFFGELF--GAFKYLPRPVWILL 264 (477)
T ss_pred HHHHHHHHHHeeeeeccCCC--c-cccchhh--------------hccccccc-chhhhHHHHH--HHHHHCCHHHHHHH
Confidence 77666544 45568987632 1 1110000 00000000 0001111111 12233334666677
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhh--cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccch-hHHHHHH
Q 045073 160 STWFLLDIAFYTINLAQKDIYPA--TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGR-FIIQLGG 236 (402)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~gr-r~~~~~~ 236 (402)
...++..++++.+..|...+..+ ++-++.+. ..+++..+.+........+...+.+++..++.+|+|+ |.....+
T Consensus 265 ~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~--~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s 342 (477)
T TIGR01301 265 LVTCLNWIAWFPFILFDTDWMGREVYGGSVNQG--AKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIV 342 (477)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHcCCCCcch--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHH
Confidence 77777777777777787777653 33222211 2345555556666666667667777788899999985 6777888
Q ss_pred HHHHHHHHHHHHHHhhcccCC-CCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccc--hhhhhh
Q 045073 237 FLLMSICMAILGARYDSLRGK-KCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPAR--LRSTCH 313 (402)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~r~~~~ 313 (402)
.++.+++++...+......+. +.+..+.... .+........+.....+.......+++++++++..|++ ..|..+
T Consensus 343 ~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~m 420 (477)
T TIGR01301 343 NIILAICLAATVLVTYVAKNSRYYDGDGESLP--PPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSM 420 (477)
T ss_pred HHHHHHHHHHHHHHHhhhhccccccccccccC--cchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchh
Confidence 777777777666543211000 0000000000 00111122222223333334455668899999999954 448899
Q ss_pred hHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee-eccCC
Q 045073 314 GISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV-PETNG 368 (402)
Q Consensus 314 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~et~~ 368 (402)
|+.|.+..+.+++..+..+.+.+..+.+....+.+.++..+++.+..+++ |+++.
T Consensus 421 gilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 421 GVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999988888776665455678888888888888877754 77653
No 100
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.55 E-value=1.5e-13 Score=126.94 Aligned_cols=180 Identities=13% Similarity=0.051 Sum_probs=131.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchh
Q 045073 151 HGLHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRF 230 (402)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr 230 (402)
.|+......+..+......|......|.+.+++|+++.+.+. ......++..++.++.|.+.||+|||
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~Dr~grr 85 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQ------------SVTVTAFVAMFASLFITQTIQATDRR 85 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHhcccCcH
Confidence 444444455444444445556666678888999999887665 56667778888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhh
Q 045073 231 IIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRS 310 (402)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 310 (402)
+.+..+.++.+++.++.... .+. ....+.....+.......+...+++.|.+|++.|+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~---------------------~~~-~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~ 143 (394)
T PRK10213 86 YVVILFAVLLTLSCLLVSFA---------------------NSF-SLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVP 143 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHH---------------------ChH-HHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHH
Confidence 99999998888877665542 222 33333333334333344566777889999999999
Q ss_pred hhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeecc
Q 045073 311 TCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPET 366 (402)
Q Consensus 311 ~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et 366 (402)
.+.++......++..++|.+.+.+.+.. +|+..|++.+++.++..+... ..||+
T Consensus 144 ~a~~~~~~~~~~g~~ig~~l~~~l~~~~--gw~~~f~~~~~l~~~~~l~~~~~~p~~ 198 (394)
T PRK10213 144 KALSVIFGAVSIALVIAAPLGSFLGELI--GWRNVFNAAAVMGVLCIFWIIKSLPSL 198 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc--CHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 9999999999999999999999998877 899999888777666554433 24654
No 101
>PRK03545 putative arabinose transporter; Provisional
Probab=99.54 E-value=1.4e-13 Score=127.36 Aligned_cols=176 Identities=12% Similarity=0.100 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHH
Q 045073 155 LLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQL 234 (402)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~ 234 (402)
.+.+.+..+......+......|.+.+++|.+..+.+. ......++..++.+..|.+.||+|||+++.
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~ 78 (390)
T PRK03545 11 VVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGL------------MLTIYAWVVALMSLPLMLLTSNVERRKLLI 78 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHcCCChHHHHH
Confidence 34434433433344444555678888999999887665 556666777777888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhh
Q 045073 235 GGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHG 314 (402)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~ 314 (402)
.+..+.+++.+..... .+. ..+.+.....+.......+...++..|.+|++.|+++.|
T Consensus 79 ~~~~~~~~~~~~~~~~---------------------~~~-~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g 136 (390)
T PRK03545 79 GLFVLFIASHVLSALA---------------------WNF-TVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALS 136 (390)
T ss_pred HHHHHHHHHHHHHHHh---------------------ccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHH
Confidence 9988888877666553 222 233333333333333334556678899999999999999
Q ss_pred HHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeecc
Q 045073 315 ISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPET 366 (402)
Q Consensus 315 ~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et 366 (402)
+......+|..++|.+.+.+.+.. +|++.|++.+++.++..+..+ .+||.
T Consensus 137 ~~~~~~~~g~~ig~~l~~~l~~~~--gw~~~f~~~~~~~~l~~~~~~~~~~~~ 187 (390)
T PRK03545 137 LLATGTALAMVLGLPLGRVIGQYL--GWRTTFLAIGGGALITLLLLIKLLPLL 187 (390)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999888777 899999998888776655544 34553
No 102
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.53 E-value=1.3e-12 Score=122.40 Aligned_cols=250 Identities=14% Similarity=0.096 Sum_probs=155.3
Q ss_pred hhhhhhccC-cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCC-chhHHHHHHhHHHH
Q 045073 6 AVIMSEYAN-KRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGD-YLWRIVLMFGAVPA 83 (402)
Q Consensus 6 ~~~i~e~~~-~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Wr~~f~~~~i~~ 83 (402)
.++..|.++ +++|.+..+.-..+..+|.++...+...+...++.. +. .+|++...+.++..
T Consensus 125 ~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~-----------------~~~~~~~~~~~v~~iv~ 187 (428)
T PF13347_consen 125 NALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGG-----------------DTSNGYRWMALVLAIVG 187 (428)
T ss_pred hhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccC-----------------ccchHHHHHHHHHHHHH
Confidence 467889997 578999999999999999987777777766443321 22 38999999877666
Q ss_pred HHHHHH-HhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073 84 ALTYYW-RMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW 162 (402)
Q Consensus 84 ~~~~~~-~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (402)
++..+. .+..+|.++. . +++ +++.+.++.++.....|..+.++. ..
T Consensus 188 ~v~~~i~~~~~ke~~~~-----~-~~~------------------------~~~~~~~~~~~~~~~nr~~~~l~~---~~ 234 (428)
T PF13347_consen 188 LVFFLITFFFVKERSVE-----V-TEQ------------------------EKKISLRDSLRSLFRNRPFRILLL---AF 234 (428)
T ss_pred HHHhhhhhheeeecccc-----c-ccc------------------------ccccccccchhhhcccchHHHHHH---HH
Confidence 665444 4456772110 0 000 111122222222222232222222 22
Q ss_pred HHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHH
Q 045073 163 FLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMS 241 (402)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~ 241 (402)
+.............+.+.++ .|.+ ...+ .......+..+++.++.++++||+|+|+.+..+..+.+
T Consensus 235 ~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~------------~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~ 301 (428)
T PF13347_consen 235 FLQWLAFALMNTFLPYYFTYVLGNE-GLIS------------IFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAA 301 (428)
T ss_pred HHHHhhhhhhhhHHHHHHHHHhcCc-hhhH------------HHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHH
Confidence 22223333333344445544 3333 2111 15556777888888999999999999999999998888
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccccccccccc-------chhhhhhh
Q 045073 242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPA-------RLRSTCHG 314 (402)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-------~~r~~~~~ 314 (402)
++.+++.+... +......+.....+.+........+++.+|..+. +..|...|
T Consensus 302 ~~~~~~~~~~~--------------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s 361 (428)
T PF13347_consen 302 LGFLLLFFLGP--------------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFS 361 (428)
T ss_pred HHHHHHHHHHh--------------------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHH
Confidence 87777666421 1223344444444444455557788888998763 34588899
Q ss_pred HHHHHHHHhHHHHhHhHHhhhhcc
Q 045073 315 ISAAAGKAGAIVGAFGVQYYTQKG 338 (402)
Q Consensus 315 ~~~~~~~~g~~i~~~~~~~~~~~~ 338 (402)
+.++...++..+++.+.+.+.+..
T Consensus 362 ~~~~~~k~~~~la~~i~g~~l~~~ 385 (428)
T PF13347_consen 362 VNSFFIKIGQGLAGAIVGLLLALV 385 (428)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHh
Confidence 999999999999999888877654
No 103
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.53 E-value=1.6e-13 Score=126.76 Aligned_cols=177 Identities=16% Similarity=0.082 Sum_probs=128.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHH
Q 045073 156 LGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLG 235 (402)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~ 235 (402)
+...+..+.............|.+.+++|.++.+.+. ......++..++.++.|++.||+|||+.+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~ 75 (385)
T TIGR00710 8 LLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQM------------TLTLYLLGFAAGQLLWGPLSDRYGRRPVLLL 75 (385)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHhhhhHHHhcCChHHHHH
Confidence 3333333444444455555678888889998887665 6777788888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhH
Q 045073 236 GFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGI 315 (402)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~ 315 (402)
+..+.+++.+..... .+. ....+..+..+.......+...+++.|.+|++.|+++.++
T Consensus 76 ~~~~~~~~~~~~~~~---------------------~~~-~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (385)
T TIGR00710 76 GLFIFALSSLGLALS---------------------NNI-ETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSI 133 (385)
T ss_pred HHHHHHHHHHHHHHH---------------------ccH-HHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 888777777665553 222 2233333333333333445667788999999999999999
Q ss_pred HHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccCC
Q 045073 316 SAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETNG 368 (402)
Q Consensus 316 ~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~~ 368 (402)
.+....+|..+++.+.+.+.+.. +|+..+++.+++.++..+..+ +.||++.
T Consensus 134 ~~~~~~~g~~~g~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (385)
T TIGR00710 134 LMPVLALAPAVAPLLGGYILVWL--SWHAIFAFLSLAGILLSALIFFILPETLP 185 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc--CHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999888876 899888888877776655554 3466543
No 104
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.53 E-value=1.2e-13 Score=127.92 Aligned_cols=164 Identities=16% Similarity=0.137 Sum_probs=124.4
Q ss_pred HHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHH
Q 045073 169 FYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILG 248 (402)
Q Consensus 169 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~ 248 (402)
.+......|.+.+++|.++.+.+. ......++..++.++.|+++||+|||+.+..+.++.+++..+..
T Consensus 10 ~~~~~~~~~~~~~~~g~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~ 77 (399)
T TIGR00893 10 RANLSFAAPMLQEDLGLSAAQYGY------------VFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQA 77 (399)
T ss_pred HHhhhHhHHHHHHhhCCChhhHHH------------HHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHH
Confidence 344455567777889998887665 77778888899999999999999999999988887777776665
Q ss_pred HHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHh
Q 045073 249 ARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGA 328 (402)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~ 328 (402)
.. .+ ...+.+.....+.+.....+....++.|.+|++.|+++.++......+|..+++
T Consensus 78 ~~---------------------~~-~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 135 (399)
T TIGR00893 78 FA---------------------GA-YVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGG 135 (399)
T ss_pred HH---------------------cC-HHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHH
Confidence 53 22 233333333444444455567778899999999999999999999999999999
Q ss_pred HhHHhhhhccCCcchhhHHHHHHHHHHHhhheee-eeccCC
Q 045073 329 FGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM-VPETNG 368 (402)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~et~~ 368 (402)
.+.+.+.+.. +|+..|.+.+++.++..++.++ .||++.
T Consensus 136 ~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (399)
T TIGR00893 136 PLVGWILIHF--SWQWAFIIEGVLGIIWGVLWLKFIPDPPQ 174 (399)
T ss_pred HHHHHHHHhC--CchHHHHHHHHHHHHHHHHhhheecCCCC
Confidence 9999887776 8999999888877766655543 455443
No 105
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.53 E-value=3.1e-13 Score=120.42 Aligned_cols=176 Identities=16% Similarity=0.128 Sum_probs=153.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHH
Q 045073 153 LHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFII 232 (402)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~ 232 (402)
...+.+.+..|.....-+...-.+|.+.+++|.+...++. ..+.+..+..++.++...+.||+.||++
T Consensus 13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~------------lis~yAl~~ai~ap~l~~lt~r~~Rr~l 80 (394)
T COG2814 13 LALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQ------------LITAYALGVALGAPLLALLTGRLERRRL 80 (394)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHcccchHHH
Confidence 4677777888888888888999999999999999998777 8888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhh
Q 045073 233 QLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTC 312 (402)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~ 312 (402)
++..+.++.++.++.++. .++....+..+..+......+++..++..++.|+++|+++
T Consensus 81 Ll~~l~lFi~~n~l~alA----------------------p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~A 138 (394)
T COG2814 81 LLGLLALFIVSNLLSALA----------------------PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRA 138 (394)
T ss_pred HHHHHHHHHHHHHHHHHh----------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhH
Confidence 999999999999888873 4445666666666666666777888899999999999999
Q ss_pred hhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheee-ee
Q 045073 313 HGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM-VP 364 (402)
Q Consensus 313 ~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~ 364 (402)
.++.+....+...+|..+..++-+.. |||.+|++.+++.++..+..+. +|
T Consensus 139 iaiv~~G~tlA~v~GvPLGt~ig~~~--GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 139 LALVFTGLTLATVLGVPLGTFLGQLF--GWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999998 9999999999999988887774 48
No 106
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.53 E-value=2.2e-13 Score=126.81 Aligned_cols=182 Identities=15% Similarity=0.094 Sum_probs=132.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccch
Q 045073 150 KHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGR 229 (402)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~gr 229 (402)
+++..+...++..+......+......|.+.+++|.++.+.+. ......++.+++.++.|+++||+||
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~dr~g~ 79 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGW------------AFSAGILGLLPGALLGGRLADRIGR 79 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3334555565666666666777777889999999999887665 7777888889999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchh
Q 045073 230 FIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLR 309 (402)
Q Consensus 230 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 309 (402)
|+++..+.++..++.++.... .+. ..+.+.....+.+.....+...+++.|.+|++.|
T Consensus 80 r~~~~~~~~~~~~~~~~~~~~---------------------~~~-~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r 137 (406)
T PRK11551 80 KRILIVSVALFGLFSLATAQA---------------------WDF-PSLLVARLLTGVGLGGALPNLIALTSEAVGPRLR 137 (406)
T ss_pred chhHHHHHHHHHHHHHHHHHh---------------------ccH-HHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHH
Confidence 999999887776666554442 222 2333333333333334445667788999999999
Q ss_pred hhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccC
Q 045073 310 STCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETN 367 (402)
Q Consensus 310 ~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~ 367 (402)
+++.++.+....+|..+++.+.+.+.+.. +|+..|++.+++.++..++.. ++||++
T Consensus 138 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (406)
T PRK11551 138 GTAVSLMYCGVPFGGALASVIGVLAAGDA--AWRHIFYVGGVGPLLLVPLLMRWLPESR 194 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccc--CHHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 99999999999999999998877776655 788888887766655554433 457754
No 107
>PRK09669 putative symporter YagG; Provisional
Probab=99.53 E-value=1.5e-12 Score=122.58 Aligned_cols=250 Identities=14% Similarity=0.100 Sum_probs=136.2
Q ss_pred hhhhhhcc-CcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHH
Q 045073 6 AVIMSEYA-NKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAA 84 (402)
Q Consensus 6 ~~~i~e~~-~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~ 84 (402)
.++.+|+. ++++|.+..+....+..+|..+++.+...+...++. .....+|+..+.+.++.++
T Consensus 131 ~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~----------------~~~~~g~~~~~~i~~ii~~ 194 (444)
T PRK09669 131 CAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGK----------------GDEQKGYFYAMMVMGLLGV 194 (444)
T ss_pred HHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----------------CchhhhHHHHHHHHHHHHH
Confidence 35778887 568899999999888899988888777666543321 1134689998888666655
Q ss_pred HHHHH-HhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHH
Q 045073 85 LTYYW-RMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWF 163 (402)
Q Consensus 85 ~~~~~-~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (402)
+..+. .+..+|.++. +++ ++.+.++.++...+++.++.++.. .+
T Consensus 195 v~~~~~~~~~~e~~~~----~~~----------------------------~~~~~~~~~~~~~~n~~~~~l~~~---~~ 239 (444)
T PRK09669 195 VLFFCCFFMTKERYTP----EVD----------------------------NSSSVWKDLKLLLGNSQWRIMFIF---NV 239 (444)
T ss_pred HHHHHHhCCeEEecCC----CCc----------------------------CCCCHHHHHHHHhCCchHHHHHHH---HH
Confidence 54443 3334443110 000 000011111222222222222222 22
Q ss_pred HHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHH
Q 045073 164 LLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSIC 243 (402)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~ 243 (402)
.............+.+.+.. +...+. .........+..+++.++.++++||+|+|+.+..+..+.++.
T Consensus 240 ~~~~~~~~~~~~~~y~~~~~-~~~~~~-----------~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~ 307 (444)
T PRK09669 240 VLLTAVVTRGGATLYYVNYV-LLRPDL-----------ATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVIL 307 (444)
T ss_pred HHHHHHHHHhhhhheeeeee-cCCHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence 21112211122223333322 221111 111334455667778888999999999999988776554443
Q ss_pred HHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccc-------cchhhhhhhHH
Q 045073 244 MAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFP-------ARLRSTCHGIS 316 (402)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~~~~~~ 316 (402)
...+... . .+......+..+..+.+.....+..+++.+|..+ .+..|...|+.
T Consensus 308 ~~~~~~~----~----------------~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~ 367 (444)
T PRK09669 308 SALIFFI----P----------------PSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTN 367 (444)
T ss_pred HHHHHHh----C----------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHH
Confidence 3222221 0 1112222222233333344455678888888875 23346677888
Q ss_pred HHHHHHhHHHHhHhHHhhhhcc
Q 045073 317 AAAGKAGAIVGAFGVQYYTQKG 338 (402)
Q Consensus 317 ~~~~~~g~~i~~~~~~~~~~~~ 338 (402)
+.+..+|..+++.+.+.+.+..
T Consensus 368 ~~~~klg~alg~~i~g~ll~~~ 389 (444)
T PRK09669 368 LFAIKLGLAIGGAVVGWILAWV 389 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 8899999999999999888765
No 108
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.51 E-value=5e-13 Score=127.33 Aligned_cols=179 Identities=15% Similarity=0.064 Sum_probs=130.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHH
Q 045073 153 LHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFII 232 (402)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~ 232 (402)
..+..+++..+.............|.+.+++|.+..+.++ ....+.++...+.+..|+++||+|||+.
T Consensus 6 ~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~------------~~~~~~l~~~~~~~~~G~l~D~~Grk~~ 73 (495)
T PRK14995 6 LTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLW------------IIDIYSLVMAGMVLPMGALGDRIGFKRL 73 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHH------------HHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 3455666666666666667777789999999988876555 5555666666777889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccccccccc-ccchhhh
Q 045073 233 QLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELF-PARLRST 311 (402)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~ 311 (402)
++.+..+..++.++.+.. . +...+++.....+.+..+..+.....+.+.+ |++.|++
T Consensus 74 l~~~~~~~~~~~~~~~~a---------------------~-~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~ 131 (495)
T PRK14995 74 LMLGGTLFGLASLAAAFS---------------------P-TASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNM 131 (495)
T ss_pred HHHHHHHHHHHHHHHHHc---------------------C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 999998888887776653 2 2233333333334333334444444455554 7899999
Q ss_pred hhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccC
Q 045073 312 CHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETN 367 (402)
Q Consensus 312 ~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~ 367 (402)
+.|+......+|..+||.+.+.+.+.. +|++.|++...+.++..++.+ ++|+.+
T Consensus 132 ~~g~~~~~~~~g~~~gp~lgg~l~~~~--gwr~~f~i~~~~~~~~~~l~~~~l~~~~ 186 (495)
T PRK14995 132 ALGVWAAVGSGGAAFGPLVGGILLEHF--YWGSVFLINVPIVLVVMGLTARYVPRQA 186 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccC--ChHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999887 899999988877776665554 346643
No 109
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.51 E-value=2e-12 Score=121.87 Aligned_cols=187 Identities=11% Similarity=0.101 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhH
Q 045073 153 LHLLGTTSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFI 231 (402)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~ 231 (402)
|.+....+..+...+.+|....+.|..... ++.+..... ..........++...|.++.|.+..+++|-|
T Consensus 310 r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~---------~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~K 380 (599)
T PF06609_consen 310 RGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISIT---------EIGWISSPVGFGSCAGAVILGLLFSKIRHIK 380 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccc---------eeehhhhhHHHHHHHHHHHHHHHHHHccchh
Confidence 345555556666666777777777766544 333221100 1112555667777788888888988887644
Q ss_pred -HHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhh
Q 045073 232 -IQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRS 310 (402)
Q Consensus 232 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 310 (402)
.++++..++.+++.+++... ..+. ...+.+.. +.+++..+......+.+.-..|++.-+
T Consensus 381 w~li~~~~~~ta~~Gama~~~--~~n~--------------~~~i~~~~----l~g~giG~~~~~~~~~~ql~~p~~~ig 440 (599)
T PF06609_consen 381 WQLIFGSVLMTAFCGAMAAVR--PDNK--------------NAAIAFLV----LAGFGIGGILVPAIVIAQLIVPDEDIG 440 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHcc--CCCc--------------chHHHHHH----HHHHhHHHHHHHHHHeeEeeeCchHHH
Confidence 44556555544433333321 1111 11122222 222212222223444556678999999
Q ss_pred hhhhHHHHHHHHhHHHHhHhHHhhhhc-----------------------------------------c-----------
Q 045073 311 TCHGISAAAGKAGAIVGAFGVQYYTQK-----------------------------------------G----------- 338 (402)
Q Consensus 311 ~~~~~~~~~~~~g~~i~~~~~~~~~~~-----------------------------------------~----------- 338 (402)
++.|+...+..+|+.++..++..+... .
T Consensus 441 ~a~gL~~s~R~~GGsIg~aIy~~I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~iPGit~~i~~a~ 520 (599)
T PF06609_consen 441 TATGLTGSIRSIGGSIGYAIYNAIFTNKLPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAIPGITPEIIAAV 520 (599)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhCCCCCHHHHHHH
Confidence 999999999999999888655433210 0
Q ss_pred --------CCcchhhHHHHHHHHHHHhhheeeeeccCC
Q 045073 339 --------DKQIKQSIITLAVVNFLGFLCSFMVPETNG 368 (402)
Q Consensus 339 --------~~~~~~~~~~~~~~~~i~~i~~~~~~et~~ 368 (402)
..+++++++....+..++.+..+++++.++
T Consensus 521 ~~A~~~aYa~ay~~V~~~siaFG~vaiiaa~fl~d~~~ 558 (599)
T PF06609_consen 521 VAAFQEAYAHAYRYVYYSSIAFGVVAIIAALFLGDIDK 558 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChHH
Confidence 005678888888888888888888876543
No 110
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.50 E-value=9.1e-13 Score=124.75 Aligned_cols=177 Identities=8% Similarity=-0.023 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHH
Q 045073 153 LHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFII 232 (402)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~ 232 (402)
+.+.......+......+....+.|.+.+++|++..+.+. ......++..++.++.|+++||+|||++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~------------~~~~~~~~~~~~~~~~G~l~dr~G~r~~ 103 (476)
T PLN00028 36 RAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGN------------AGIASVSGSIFSRLAMGPVCDLYGPRYG 103 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCChHH
Confidence 3444444455555555666777788888899998877554 5566677788888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhh
Q 045073 233 QLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTC 312 (402)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~ 312 (402)
+..+.++.+++.++.+.. .+. ..+.+..+..+++..+.. ....+++|.+|++.|+++
T Consensus 104 ~~~~~~~~~~~~~~~~~~---------------------~s~-~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a 160 (476)
T PLN00028 104 SAFLLMLTAPAVFCMSLV---------------------SSA-TGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTA 160 (476)
T ss_pred HHHHHHHHHHHHHHHHHh---------------------cCH-HHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHH
Confidence 988887777766655543 222 222222223232222222 234567899999999999
Q ss_pred hhHHHHHHHHhHHHHhHhHHhhhhc---c----CCcchhhHHHHHHHHHHHhhheeeee
Q 045073 313 HGISAAAGKAGAIVGAFGVQYYTQK---G----DKQIKQSIITLAVVNFLGFLCSFMVP 364 (402)
Q Consensus 313 ~~~~~~~~~~g~~i~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~i~~i~~~~~~ 364 (402)
.|+.+....+|..+++.+.+.+... . ..+|++.|++.+++.++..++.++++
T Consensus 161 ~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 161 NGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLG 219 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999888888888877666544321 0 01799999998888776665555443
No 111
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.50 E-value=4.2e-13 Score=125.71 Aligned_cols=164 Identities=14% Similarity=0.142 Sum_probs=123.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073 154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ 233 (402)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~ 233 (402)
.+....+.++......+......|.+.+++|.++.+.+. ......++..++.++.|+++||+|||+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~------------~~~~~~~~~~l~~~~~g~l~dr~g~r~~l 86 (426)
T PRK12307 19 ALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAF------------LATAAFIGRPFGGALFGLLADKFGRKPLM 86 (426)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCChHHH
Confidence 455555556665666666677778888889999877655 66677888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073 234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH 313 (402)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 313 (402)
..+.++.+++.++..+. .....+.+.....+.+..+..+....++.|.+|++.|+++.
T Consensus 87 ~~~~~~~~~~~~~~~~~----------------------~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~ 144 (426)
T PRK12307 87 MWSIVAYSVGTGLSGLA----------------------SGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKAS 144 (426)
T ss_pred HHHHHHHHHHHHHHHHH----------------------hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhh
Confidence 99998888887766653 12233333344444434445556777889999999999999
Q ss_pred hHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHH
Q 045073 314 GISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVN 353 (402)
Q Consensus 314 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (402)
++......+|.++++.+.+.+.+.. +|+..|++.+...
T Consensus 145 ~~~~~~~~lg~~~~~~l~~~l~~~~--~w~~~f~i~~~~~ 182 (426)
T PRK12307 145 AFLVSGFGIGNIIAAYFMPSFAEAY--GWRAAFFVGLLPV 182 (426)
T ss_pred hHHHHHHhHHHHHHHHHHHHHcccC--CHHHHHHHHHHHH
Confidence 9999999999999998888877766 8998888754433
No 112
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.50 E-value=9.2e-13 Score=122.80 Aligned_cols=174 Identities=17% Similarity=0.127 Sum_probs=124.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhcc-chh
Q 045073 153 LHLLGTTSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRI-GRF 230 (402)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-grr 230 (402)
+.++..++........+|+...++|.++.+ +|++..+++. ..........++.+++|+++||+ |||
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~------------i~~~~~~~~~l~~ligG~LaDRilGrr 76 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYE------------LFSAYCSLVYVTPILGGFLADKVLGNR 76 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHccCcH
Confidence 456666666677778899999999999864 7888876554 55666677777888999999999 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccc--h
Q 045073 231 IIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPAR--L 308 (402)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~ 308 (402)
+.+.++.++.+++.+++.... ...........+. ..+.....+...++.+|.+|++ .
T Consensus 77 r~iliG~il~~lg~lll~~~~--------------------~~~~~~~l~l~li-~iG~G~~~~~~~alv~elfp~~~~~ 135 (493)
T PRK15462 77 MAVMLGALLMAIGHVVLGASE--------------------IHPSFLYLSLAII-VCGYGLFKSNVSCLLGELYEPTDPR 135 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhh--------------------cchhHHHHHHHHH-HHhcccccccHHHHHHHHCCCCCcc
Confidence 999999888877766554310 0111111111111 1112223345567889999986 7
Q ss_pred hhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee
Q 045073 309 RSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF 361 (402)
Q Consensus 309 r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~ 361 (402)
|+++.++.+...++|+.++|.+.+++.+.. +|+..|.+.++..+++.+..+
T Consensus 136 R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~--Gw~~~F~iaaigm~l~li~~~ 186 (493)
T PRK15462 136 RDGGFSLMYAAGNVGSIIAPIACGYAQEEY--SWAMGFGLAAVGMIAGLVIFL 186 (493)
T ss_pred ccceehHHHHHHHHHHHHHHHHHHHHHhhh--ChHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998877 899999887665555554443
No 113
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.50 E-value=8.9e-13 Score=125.94 Aligned_cols=148 Identities=20% Similarity=0.142 Sum_probs=108.5
Q ss_pred HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073 205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT 284 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (402)
......++.+++.++.|++.||+|||+.+..+.++..++.++....... .. ......+++..+.
T Consensus 61 ~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~--~~--------------~~~~~~~~~~r~l 124 (502)
T TIGR00887 61 VNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGS--SP--------------KSVMATLCFWRFW 124 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCc--cc--------------chHHHHHHHHHHH
Confidence 6777888899999999999999999999998888777776655543110 00 1112334444445
Q ss_pred HHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhc---------------------cCCcch
Q 045073 285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQK---------------------GDKQIK 343 (402)
Q Consensus 285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~---------------------~~~~~~ 343 (402)
.+++..+..+....+.+|.+|++.|+++.++......+|..+++.+...+... ...+|+
T Consensus 125 ~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR 204 (502)
T TIGR00887 125 LGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWR 204 (502)
T ss_pred HHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHH
Confidence 55555556677889999999999999999999999999998888776554321 011699
Q ss_pred hhHHHHHHHHHHHhhheeeeeccCC
Q 045073 344 QSIITLAVVNFLGFLCSFMVPETNG 368 (402)
Q Consensus 344 ~~~~~~~~~~~i~~i~~~~~~et~~ 368 (402)
..+.+.++..++.+++.+++||+.+
T Consensus 205 ~~~~~~~ip~~i~~~~~~~lpESpr 229 (502)
T TIGR00887 205 ILIGFGAVPALLALYFRLTIPETPR 229 (502)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCHH
Confidence 9998887777777777777899854
No 114
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.50 E-value=2.1e-13 Score=125.55 Aligned_cols=167 Identities=11% Similarity=0.035 Sum_probs=122.2
Q ss_pred HHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHH
Q 045073 165 LDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICM 244 (402)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~ 244 (402)
............|.+.+++|.+..+.+. ......++..++.++.|+++||+|||+.+..+.++.+++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 74 (379)
T TIGR00881 7 YYLVRKNFALAMPYLVEEIGLSKTDLGL------------LLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVN 74 (379)
T ss_pred HHHhHHhhhhhhHHHHHHhCCCHhHHHH------------HHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHH
Confidence 3344455566678888888999887665 7777888888999999999999999999999988888777
Q ss_pred HHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhH
Q 045073 245 AILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGA 324 (402)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~ 324 (402)
++.... .+ .....+.....+.+.....+...+++.|.+|++.|+++.++.+....+|.
T Consensus 75 ~~~~~~---------------------~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 132 (379)
T TIGR00881 75 LFFGFS---------------------TS-LWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGG 132 (379)
T ss_pred HHHHHh---------------------hh-HHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHH
Confidence 766653 22 23333333343444444556778889999999999999999999999999
Q ss_pred HHHh-HhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccC
Q 045073 325 IVGA-FGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETN 367 (402)
Q Consensus 325 ~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~ 367 (402)
.+++ .+...+.+.. +|+..|++.+++.++..++.+ +.||++
T Consensus 133 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T TIGR00881 133 GLLPPLVLFGIAELY--SWHWVFIVPGIIAIIVSLICFLLLRDSP 175 (379)
T ss_pred HHHHHHHHHHHHhcC--CchhHHHHHHHHHHHHHHHHheeeCCCc
Confidence 9999 4555555554 888888888777665544444 445543
No 115
>PRK10054 putative transporter; Provisional
Probab=99.49 E-value=6.3e-13 Score=122.91 Aligned_cols=176 Identities=10% Similarity=-0.031 Sum_probs=124.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073 155 LLGTTSTWFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ 233 (402)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~ 233 (402)
++.+....++...+.+....++|.+++ ++|++..+.+. ......+..+++.++.|+++||+|||+++
T Consensus 9 ~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~------------~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~ 76 (395)
T PRK10054 9 TSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGY------------AMTIALTIGVVFSLGFGILADKFDKKRYM 76 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHhhcCcchhH
Confidence 344444555556667777777777774 58999887665 66666777888889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073 234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH 313 (402)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 313 (402)
..+.++.+++.+.+.+. ++.+..+.... ..+.......+...++..|..|++.|+++.
T Consensus 77 ~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (395)
T PRK10054 77 LLAITAFASGFIAIPLV---------------------NNVTLVVLFFA-LINCAYSVFSTVLKAWFADNLSSTSKTKIF 134 (395)
T ss_pred HHHHHHHHHHHHHHHHH---------------------hHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCHhHHHHHH
Confidence 88887777766655543 22222222222 222222233455677789999999999999
Q ss_pred hHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccC
Q 045073 314 GISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETN 367 (402)
Q Consensus 314 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~ 367 (402)
|+.+....+|.+++|.+.+.+.. . +|+.+|.+.+++.++..++.. ++||.+
T Consensus 135 g~~~~~~~lg~~igp~l~~~l~~-~--g~~~~f~~~~~~~~i~~i~~~~~~~~~~ 186 (395)
T PRK10054 135 SLNYTMLNIGWTVGPPLGTLLVM-Q--SINLPFWLAAICSAFPLVFIQIWVQRSE 186 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-h--ccCcHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999998775 3 888899888877777655444 345543
No 116
>PRK03699 putative transporter; Provisional
Probab=99.49 E-value=2e-12 Score=119.75 Aligned_cols=174 Identities=10% Similarity=0.005 Sum_probs=124.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHH
Q 045073 153 LHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFII 232 (402)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~ 232 (402)
+..+..++.++.............|.+.+++|++..+.+. ......++..++.++.|++.||+|||+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~------------~~s~~~~~~~i~~~~~g~l~dr~g~r~~ 74 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSN------------TFTFLNAGILISIFLNAWLMEIIPLKRQ 74 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 3455555556665555667777789999999999887655 6667778888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhh
Q 045073 233 QLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTC 312 (402)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~ 312 (402)
+..+..+.+++.++.... .+. ....+.....+.......+....++.|.+|++.|+.+
T Consensus 75 ~~~~~~~~~i~~~l~~~~---------------------~~~-~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~ 132 (394)
T PRK03699 75 LIFGFALMILAVAGLMFS---------------------HSL-ALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSR 132 (394)
T ss_pred HHHHHHHHHHHHHHHHHc---------------------chH-HHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHH
Confidence 998887777776665542 122 2223232333332333344566778999999999999
Q ss_pred hhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee
Q 045073 313 HGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF 361 (402)
Q Consensus 313 ~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~ 361 (402)
.++.+....+++.++|.+.+.+..... +|+..|.+.+++.++..++.+
T Consensus 133 ~~~~~~~~~~g~~~~~~~~~~l~~~~~-gw~~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 133 LLFTDSFFSMAGMIFPIIAAYLLARSI-EWYWVYACIGLVYVAIFILTL 180 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHHHHHHH
Confidence 999888888888999988877654321 899999888877766554443
No 117
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.49 E-value=3e-13 Score=128.93 Aligned_cols=177 Identities=12% Similarity=0.118 Sum_probs=132.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHH
Q 045073 155 LLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQL 234 (402)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~ 234 (402)
+..+.+..+.............|.+.+++|.+..+.+. ......++.+++.++.|+++||+|||+.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~ 71 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQW------------VITSYMLANAISIPLTGWLAKRFGTRRLFL 71 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhH------------HHHHHHHHHHHHHHhHHHHHHHhCcHHHHH
Confidence 34444455555555566667789999999998876655 667778888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhh
Q 045073 235 GGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHG 314 (402)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~ 314 (402)
.+.++..++.++.... .....+.+.....+.+.....+...+++.|.+|++.|+++.+
T Consensus 72 ~~~~~~~~~~~~~~~~----------------------~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 129 (485)
T TIGR00711 72 ISTFAFTLGSLLCGVA----------------------PNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMA 129 (485)
T ss_pred HHHHHHHHHHHHHhCc----------------------CCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHH
Confidence 9988777776665542 222333344444444444455677888999999999999999
Q ss_pred HHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheee-eeccC
Q 045073 315 ISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM-VPETN 367 (402)
Q Consensus 315 ~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~et~ 367 (402)
+......+|..++|.+.+.+.+.. +|++.|++.+.+.++..++.++ +||++
T Consensus 130 ~~~~~~~~g~~~g~~~~~~l~~~~--~w~~~f~~~~~~~~~~~~~~~~~~~~~~ 181 (485)
T TIGR00711 130 IWGLTVLVAPALGPTLGGWIIENY--HWRWIFLINVPIGIIVVVVAFFILPRDK 181 (485)
T ss_pred HHHHHHHHHhhhhhccHhHhccCc--CceehhhhhhHHHHHHHHHHHHHcCCcc
Confidence 999999999999999999988876 8999998887777666555443 46543
No 118
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.49 E-value=2.1e-13 Score=118.08 Aligned_cols=272 Identities=13% Similarity=0.074 Sum_probs=139.3
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
.++.++++|+.++|+|++.++.++..+++|.++||.+|+++...... ...+..-.+-++..+.
T Consensus 139 ~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~-----------------~g~~p~alP~~~v~i~ 201 (451)
T KOG2615|consen 139 SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSI-----------------SGSYPFALPCLLVFIL 201 (451)
T ss_pred HHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhh-----------------hccCchHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999741100 0222222333333344
Q ss_pred HHH-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073 83 AAL-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST 161 (402)
Q Consensus 83 ~~~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (402)
+.. ..+..+++||+-.. ++++ ++...+.+..+++ .+..+. .........++...+..........+.
T Consensus 202 a~~~v~~~~~~lpETL~~---rk~~--~~~~~~~~~~~~~--~~~~~~-----~~~~~v~~lrn~p~~~~i~~~~i~~l~ 269 (451)
T KOG2615|consen 202 AAGDVTFFPWFLPETLPL---RKRN--DEHSTLQEAADDR--LALLKF-----ARIFKVAALRNPPLLDFISVLRIFGLH 269 (451)
T ss_pred HHHHHHHHHHhCCccccc---hhhc--ccccchhhhhhhh--hhhcch-----hhhhhhhhhcCccccchHHHHHHHHHH
Confidence 443 45566789998321 1111 1111111111110 000000 000000111111111100011111222
Q ss_pred HHHHHHHHHHHHhhhhhhh--hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccc--hhHHHHHHH
Q 045073 162 WFLLDIAFYTINLAQKDIY--PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIG--RFIIQLGGF 237 (402)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g--rr~~~~~~~ 237 (402)
.+.+... |....+.+..+ +.+|+++.+.+. +....++...+.........+|.+ -+-.+..+.
T Consensus 270 ~~ly~~l-~s~~~~t~~~l~~~rfg~ss~~~G~------------vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l 336 (451)
T KOG2615|consen 270 YFLYLEL-FSGLENTVLFLTHGRFGYSSMQQGK------------VLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSL 336 (451)
T ss_pred HHHHHHH-HHHHHhhHHHhhcCccCCChhhhee------------eeehhhHHHHHHHHhccccccccccchhhHHHHHH
Confidence 2222222 22222333344 568899888665 444444444443333444455544 333444443
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHH
Q 045073 238 LLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISA 317 (402)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~ 317 (402)
.++.-..+++... .....+.+......+......+....+.....|.+.||+..|+..
T Consensus 337 ~~~vP~~llls~~----------------------~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~ 394 (451)
T KOG2615|consen 337 LLIVPAFLLLSLA----------------------RTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFR 394 (451)
T ss_pred HHHHHHHHHHhcc----------------------ccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHH
Confidence 3332222222221 111222222222233333344556677888999999999999999
Q ss_pred HHHHHhHHHHhHhHHhhhhcc
Q 045073 318 AAGKAGAIVGAFGVQYYTQKG 338 (402)
Q Consensus 318 ~~~~~g~~i~~~~~~~~~~~~ 338 (402)
..+.++.++||.+.|.+..+.
T Consensus 395 Sl~alaRaiGPlv~g~i~~Ws 415 (451)
T KOG2615|consen 395 SLGALARAIGPLVSGVIFSWS 415 (451)
T ss_pred HHHHHHHHhhhhhhheeEEEe
Confidence 999999999999998887654
No 119
>PRK10504 putative transporter; Provisional
Probab=99.49 E-value=7.7e-13 Score=125.60 Aligned_cols=176 Identities=13% Similarity=0.124 Sum_probs=130.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073 154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ 233 (402)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~ 233 (402)
.++..+...+......+....+.|.+.+++|.+..+.+. ......++..++.++.|+++||+|||+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~d~~g~r~~~ 78 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHM------------VIVSYVLTVAVMLPASGWLADRVGVRNIF 78 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhchHHHH
Confidence 455566666666667777788899999999999886554 55666677778888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073 234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH 313 (402)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 313 (402)
+.+..+.+++.+..... .+. ..+.+.....+.+.....+...+++.|.+|++.|+++.
T Consensus 79 ~~~~~~~~~~~~~~~~~---------------------~~~-~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (471)
T PRK10504 79 FTAIVLFTLGSLFCALS---------------------GTL-NELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAM 136 (471)
T ss_pred HHHHHHHHHHHHHHHHh---------------------CCH-HHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 98877776666554432 122 22333333334433444556777889999999999999
Q ss_pred hHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee-ec
Q 045073 314 GISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV-PE 365 (402)
Q Consensus 314 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~e 365 (402)
++......+|..++|.+.+.+.+.. +|++.|.+...+..+..+..... |+
T Consensus 137 ~~~~~~~~~g~~~g~~~~g~l~~~~--gw~~~f~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 137 TFVTLPGQVGPLLGPALGGLLVEYA--SWHWIFLINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhhc--cHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999998877 89999988777766665555433 44
No 120
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.49 E-value=1.1e-12 Score=125.55 Aligned_cols=179 Identities=17% Similarity=0.158 Sum_probs=129.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhH
Q 045073 152 GLHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFI 231 (402)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~ 231 (402)
++.+..+.+..+.............|.+.+++|.+..+.+. ......++..++.++.|+++||+|||+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~ 86 (496)
T PRK03893 19 WKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAAS------------LISAAFISRWFGGLLLGAMGDRYGRRL 86 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCcHH
Confidence 34555666666666666667777788888889998876554 666677788888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhh
Q 045073 232 IQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRST 311 (402)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 311 (402)
.+..+.++.+++.++.... .+ .....+.....+++..+..+....++.|.+|++.|+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~---------------------~~-~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~ 144 (496)
T PRK03893 87 AMVISIVLFSVGTLACGFA---------------------PG-YWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNK 144 (496)
T ss_pred HHHHHHHHHHHHHHHHHHH---------------------hH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 9998888777777666653 22 2333333334444344445566778899999999999
Q ss_pred hhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeecc
Q 045073 312 CHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPET 366 (402)
Q Consensus 312 ~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et 366 (402)
+.++......+|..+++.+.+.+.+.. +|+..|.+.++..++..+....+||.
T Consensus 145 ~~~~~~~~~~~g~~~~~~~~~~l~~~~--~w~~~f~~~~~~~~~~~~~~~~~p~~ 197 (496)
T PRK03893 145 ASGFLISGFSIGAVVAAQVYSLVVPVW--GWRALFFIGILPIIFALWLRKNLPEA 197 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccC--CHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 999999999999999999999888876 89988877544444433333334554
No 121
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.49 E-value=9.4e-12 Score=121.02 Aligned_cols=217 Identities=12% Similarity=0.128 Sum_probs=123.6
Q ss_pred CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc--CcccccccccccCCCCCc--hhHHHHH
Q 045073 2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYN--APAFNRNHVLSAQPQGDY--LWRIVLM 77 (402)
Q Consensus 2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~Wr~~f~ 77 (402)
++.+.+|+.|++|+++|+++++++..+..+|.++++.+++.+...+.+... .+.....| .+..| +||..|+
T Consensus 190 ~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~-----~dprWiGaWwl~Fl 264 (633)
T TIGR00805 190 FPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTP-----TDPRWIGAWWIGFL 264 (633)
T ss_pred hhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCC-----CCccHHHHHHHHHH
Confidence 467889999999999999999999999999999999999998754321000 00000000 01122 4888898
Q ss_pred HhHHHHHHHHHHHhhccCC-chhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHH
Q 045073 78 FGAVPAALTYYWRMKMPET-ARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLL 156 (402)
Q Consensus 78 ~~~i~~~~~~~~~~~~pes-p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (402)
+.++++++..+..+++|+. |+.. .+.+.+..+. .. .+ .. +.+.........+...+.++ ..+++ +.++
T Consensus 265 i~g~l~~l~~v~l~~~p~~lp~~~---~~~~~~~~~~-~~-~~--~~-~~~~~~~~~~~~~~~~~~~~-~Ll~n--~~f~ 333 (633)
T TIGR00805 265 ICGGVALLTSIPFFFFPKALPKEG---KRVNVDVHET-EK-LE--KS-EDKSRKKNSDITKDFPKIIK-RLLCN--PIYM 333 (633)
T ss_pred HHHHHHHHHHHHHHhCccccCCcc---cccchhhhhh-hc-cc--cc-ccccchhhhhhHHHHHHHHH-HHHcC--cHHH
Confidence 8777776655555566654 3210 0000000000 00 00 00 00000000000000011111 11222 3566
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHh-hhhhhhhhHHHhhhccc--hhHH
Q 045073 157 GTTSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALF-ATVPGYWFTVFLIDRIG--RFII 232 (402)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~g~l~dr~g--rr~~ 232 (402)
...+..+.....+++...|+|.++++ +|+++.+++. +.....+ +.++|.+++|+++||++ .|+.
T Consensus 334 ~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~------------l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~ 401 (633)
T TIGR00805 334 LVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANF------------LIGVVNLPAAGLGYLIGGFIMKKFKLNVKKA 401 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHH------------HhhhhhhhHHHHHHhhhhheeeeecccHHHH
Confidence 66666667777888888999999975 8888887554 4333333 56788889999999998 4566
Q ss_pred HHHHHHHHHHHHHH
Q 045073 233 QLGGFLLMSICMAI 246 (402)
Q Consensus 233 ~~~~~~~~~~~~~~ 246 (402)
+.++.++..++.+.
T Consensus 402 ~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 402 AYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHHHHHHHH
Confidence 66666555555433
No 122
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.49 E-value=3.1e-12 Score=120.95 Aligned_cols=146 Identities=12% Similarity=0.042 Sum_probs=86.8
Q ss_pred HHHHHHhhhhhhhhhHHHhhhccchhH-------HHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHH
Q 045073 205 MFLVALFATVPGYWFTVFLIDRIGRFI-------IQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWF 277 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr~grr~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (402)
....+.+..++.+++.+++.||+++|+ .+.+|+++.+++++.+..........+ . ..+.++.
T Consensus 314 ~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~--~---------~~s~~~~ 382 (489)
T PRK10207 314 FQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQ--G---------LTSPWFI 382 (489)
T ss_pred HHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCC--C---------ccCHHHH
Confidence 334444555566677889999999886 366677776666554432211111000 0 0223333
Q ss_pred HHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhcc--------CCcchhhHHHH
Q 045073 278 MILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKG--------DKQIKQSIITL 349 (402)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~--------~~~~~~~~~~~ 349 (402)
+..+ +..+.+.....+....++.+..|++.++.++|+.+....+|+.++..+........ ...+.+.|...
T Consensus 383 i~~~-~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~ 461 (489)
T PRK10207 383 VLVY-LFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKI 461 (489)
T ss_pred HHHH-HHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHH
Confidence 3333 33334344455666778889999999999999999999999998887765442100 00244666666
Q ss_pred HHHHHHHhhheee
Q 045073 350 AVVNFLGFLCSFM 362 (402)
Q Consensus 350 ~~~~~i~~i~~~~ 362 (402)
++..++..++.+.
T Consensus 462 ~~~~~~~~v~~~~ 474 (489)
T PRK10207 462 GLVTLGVAVVMAL 474 (489)
T ss_pred HHHHHHHHHHHHH
Confidence 6666655555444
No 123
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.49 E-value=1.3e-12 Score=123.41 Aligned_cols=174 Identities=11% Similarity=-0.020 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhh---cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhc-cc
Q 045073 153 LHLLGTTSTWFLLDIAFYTINLAQKDIYPA---TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDR-IG 228 (402)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~g 228 (402)
+.++.+.+..+....++|+...++|.|+++ +|++..+++. ......++..++.+++|+++|| +|
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~------------~~~~~~~~~~~~~~~~G~laDr~~G 77 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFI------------IFGAYSALVYLLTSVGWWFGDRVWG 77 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHH------------HHHHHHHHHHHHHhhHHHHHHhhcc
Confidence 355666666777778889999999999865 7888877665 6777778888999999999999 89
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccch
Q 045073 229 RFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARL 308 (402)
Q Consensus 229 rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 308 (402)
||+.+..+.++.+++.+++... .+. ....+.....+.+.....+...++.++.+|++.
T Consensus 78 ~~~~l~~~~~~~~~g~~~~~~~---------------------~~~-~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~ 135 (475)
T TIGR00924 78 TKKTMVLGGIVLMLGHFMLAMS---------------------IYP-DLIFYGLGTIAVGSGLFKANPSSMVGKLYERGD 135 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHhc---------------------ccH-hHHHHHHHHHHhccccccCCHHHHHHHhcCCCC
Confidence 9999999998888877766652 111 222222222233333345566778889998754
Q ss_pred ---hhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheee
Q 045073 309 ---RSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM 362 (402)
Q Consensus 309 ---r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~ 362 (402)
|+++.++.+...++|.+++|.+.+.+.+.. +|+..|.+.++..+++.+..++
T Consensus 136 ~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~--g~~~~f~~~~~~~~~~~l~~~~ 190 (475)
T TIGR00924 136 MPRRDGGFTLFYMSINIGSFISPLLAGVIAENY--GYHVGFNLAAVGMVIGLLTFFA 190 (475)
T ss_pred cccccceehhHHHHHHHHHHHHHHHHHHHHHhc--ChHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999998877 8999998877666555444333
No 124
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.48 E-value=6.2e-13 Score=121.12 Aligned_cols=161 Identities=19% Similarity=0.241 Sum_probs=122.5
Q ss_pred HHHHHHHHHHHhhhh-hhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHH
Q 045073 163 FLLDIAFYTINLAQK-DIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMS 241 (402)
Q Consensus 163 ~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~ 241 (402)
+.............| .+.+++|.+..+.+. ......++..++.++.|+++||+|||+++..+.++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~ 73 (352)
T PF07690_consen 6 FLSGFGFSIISPALPLYLAEELGLSPSQIGL------------LFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFA 73 (352)
T ss_dssp HHHHHHHHHHHHHHH-HHHCCSTTTSHCHHH------------HHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhh
Confidence 333444445555667 666788988887665 6777788888999999999999999999999988888
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHH
Q 045073 242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGK 321 (402)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 321 (402)
++.++..+. .+.+ ...+..+..+.+.....+....++.|.+|++.|+++.++......
T Consensus 74 ~~~~~~~~~---------------------~~~~-~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 131 (352)
T PF07690_consen 74 LGSLLLAFA---------------------SNFW-LLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFS 131 (352)
T ss_dssp HHHHHHHHH---------------------CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHH
T ss_pred hHHHHhhhh---------------------hhHH-HHhhhccccccccccccccccccccccchhhhhhhccccccchhh
Confidence 874444432 1222 344444444444445566788889999999999999999999999
Q ss_pred HhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhh
Q 045073 322 AGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLC 359 (402)
Q Consensus 322 ~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~ 359 (402)
+|..+++.+.+.+.+.. +|+..|++.+++.++..++
T Consensus 132 ~g~~~g~~l~~~l~~~~--~~~~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 132 LGSILGPLLGGFLISYF--GWRWAFLISAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHHHHHCCCHC--HHCCHHHHHHHHHHHHHHH
T ss_pred hhhhcccchhhhhhhcc--ccccccccccchhhhhhhh
Confidence 99999999999998766 8899999999988888764
No 125
>PRK11462 putative transporter; Provisional
Probab=99.48 E-value=5.1e-12 Score=118.95 Aligned_cols=249 Identities=9% Similarity=-0.037 Sum_probs=130.1
Q ss_pred hhhhhhccC-cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHH
Q 045073 6 AVIMSEYAN-KRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAA 84 (402)
Q Consensus 6 ~~~i~e~~~-~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~ 84 (402)
.++..|.++ +++|.+..++...+..+|.++++.+...+....+. .....+|+....+.+++++
T Consensus 131 ~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~----------------~~~~~g~~~~~~i~~ii~~ 194 (460)
T PRK11462 131 CALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGG----------------DNKPLGFQGGIAVLSVVAF 194 (460)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----------------CchhhhHHHHHHHHHHHHH
Confidence 356778886 79999999999999999998888887666543321 1133579888777666655
Q ss_pred HHHHHH-hhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHH
Q 045073 85 LTYYWR-MKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWF 163 (402)
Q Consensus 85 ~~~~~~-~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (402)
+..+.. ...+|.++- ++.+ .+.++.++....+|.++.+....+...
T Consensus 195 i~~~i~~~~~kE~~~~----~~~~-----------------------------~~~~~~l~~~~~Nk~~~~l~~~~~~~~ 241 (460)
T PRK11462 195 MMLAFCFFTTKERVEA----PPTT-----------------------------TSMREDLRDIWQNDQWRIVGLLTIFNI 241 (460)
T ss_pred HHHHHHHhcceeccCC----CccC-----------------------------CCHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 544333 334553211 0000 001111122222233333332322222
Q ss_pred HHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHH
Q 045073 164 LLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSIC 243 (402)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~ 243 (402)
.......+...|...+. .|. ....+ .......++.+++.+++++++||+|+|+.+..+..+.++.
T Consensus 242 ~~~~~~~~~~~y~~~y~--~g~-~~~~~------------~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~ 306 (460)
T PRK11462 242 LAVCVRGGAMMYYVTWI--LGT-PEVFV------------AFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVI 306 (460)
T ss_pred HHHHHHHhHhhhhhhhh--cCC-hHHHH------------HHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence 22222223333333322 222 11111 1444556777888889999999999998876554433332
Q ss_pred HHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccc-----cchh--hhhhhHH
Q 045073 244 MAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFP-----ARLR--STCHGIS 316 (402)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-----~~~r--~~~~~~~ 316 (402)
.+++.+. . . ...........+ .+.......+..+++.+|... +..| |...+..
T Consensus 307 ~~~~~~~----~-~--------------~~~~~~~~~~~l-~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~ 366 (460)
T PRK11462 307 SLAMFFV----P-M--------------QASITMFVFIFV-IGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGT 366 (460)
T ss_pred HHHHHHh----c-h--------------hHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHH
Confidence 2222211 0 0 111122222122 222223333445666676654 2244 4445666
Q ss_pred HHHHHHhHHHHhHhHHhhhhcc
Q 045073 317 AAAGKAGAIVGAFGVQYYTQKG 338 (402)
Q Consensus 317 ~~~~~~g~~i~~~~~~~~~~~~ 338 (402)
.....+|..+++.+.+.+.+..
T Consensus 367 ~f~~Klg~alg~~i~g~iL~~~ 388 (460)
T PRK11462 367 LFVLKLGLAFGGALIGWMLAYG 388 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 6888899999998888777654
No 126
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.48 E-value=4e-13 Score=126.52 Aligned_cols=299 Identities=11% Similarity=-0.010 Sum_probs=156.7
Q ss_pred cchhhhhhccCcccchhHHHHHH---HHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhH
Q 045073 4 LSAVIMSEYANKRTRGAFIAAVF---AMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGA 80 (402)
Q Consensus 4 ~~~~~i~e~~~~~~Rg~~~~~~~---~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~ 80 (402)
++-+++.|..+ +++....+... .+..+|.++++.+++.+. +..+||..|++.+
T Consensus 140 ~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~-----------------------~~~~~~~~f~~~a 195 (468)
T TIGR00788 140 LVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLL-----------------------DKTLTRILFLITA 195 (468)
T ss_pred hHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHH-----------------------HhcCcchHHHHHH
Confidence 44577888888 55544433333 334589999999999886 5578999999877
Q ss_pred HHHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073 81 VPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS 160 (402)
Q Consensus 81 i~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (402)
...++..+...+++|++... ..+..++....... ...... ...+.....++....++.....+...+
T Consensus 196 ~l~ll~~~~~~~~~E~~~~~--~~~~~~~~~~~~~~-~~~~~~----------~~~~~~~~~l~~~l~~~~i~~~l~fif 262 (468)
T TIGR00788 196 ALLLLQLFVSNLSKERRAFV--RPRIGTYLEMNMAL-LTLGVL----------ANVKVQILGLRGAIQLLEIAKPLIFIF 262 (468)
T ss_pred HHHHHHHHHHHhcccccccc--cccccccchhhhhh-hhhhHH----------HHHHHHHHHHHHHHhcHHHHHHHHHHH
Confidence 66666666667788864110 00000000000000 000000 000000000111111111111111111
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073 161 TWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240 (402)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~ 240 (402)
..+. .........+. ......|+++...+. ......++.+++..+.+++.+|++.|+++.++.++.
T Consensus 263 l~~~-~~~~~~~~~f~-~~~~~lG~s~~~~G~------------~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~ 328 (468)
T TIGR00788 263 LSYA-NLPGASGSVFC-ATTQCLPGGPSFSGM------------SKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLY 328 (468)
T ss_pred HHHh-hcCCCCceeEE-EEcccCCCCcchhhh------------HHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Confidence 1011 10100100111 111357888887665 666677888999999999999999999999887776
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG 320 (402)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~ 320 (402)
+++..........+... .+. ...+.......+.......... ....++++..|++.+++..++.+.+.
T Consensus 329 ~~~~~~~~~l~~~~~~~---------~gi--~~~~~~~~~~~l~~~~~g~~~~-~~~~~~~~~~p~~~egt~~al~~s~~ 396 (468)
T TIGR00788 329 TLSSLFDLILVKRWNLA---------FGI--SDEVFVLGDSIIAEVLAQLKFM-PFLVLLARLCPSGCESSVFALLASIL 396 (468)
T ss_pred HHHHhCceeeeeccccc---------cCC--CCeeeeeehhHHHHHHHHHHHc-cHHHHHHHhCCCCceehHHHHHHHHH
Confidence 66554432211111000 000 0111111111111222223333 34678899999999999999999999
Q ss_pred HHhHHHHhHhHHhhhhccCC---cchhh---HHHHHHHHHHHhhheeeeec
Q 045073 321 KAGAIVGAFGVQYYTQKGDK---QIKQS---IITLAVVNFLGFLCSFMVPE 365 (402)
Q Consensus 321 ~~g~~i~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~i~~i~~~~~~e 365 (402)
++|..+++.+.+.+.+..+. .+... ..+..+..++...+.+++|+
T Consensus 397 ~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~~~~llP~ 447 (468)
T TIGR00788 397 HLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLPLLHLLPR 447 (468)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999988888887641 13322 22333334444555555686
No 127
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.48 E-value=1e-12 Score=121.69 Aligned_cols=174 Identities=14% Similarity=0.072 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHH
Q 045073 159 TSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFL 238 (402)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~ 238 (402)
....+....+........|.+.+++|.+..+.+. ......++..++.++.|+++||+|||+.+..+..
T Consensus 9 ~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~ 76 (392)
T PRK10473 9 FALVLLYPAGIDMYLVGLPRIAADLNASEAQLHI------------AFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAA 76 (392)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHH
Confidence 3333444445555556788888999998876554 6666777888888999999999999999998887
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHH
Q 045073 239 LMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAA 318 (402)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~ 318 (402)
+..++.++.... .+. ....+.....+.......+...+++.|.+|++.|+++.++.+.
T Consensus 77 ~~~i~~~~~~~~---------------------~~~-~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~ 134 (392)
T PRK10473 77 LFIIASLLCSLA---------------------ETS-SLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNG 134 (392)
T ss_pred HHHHHHHHHHHh---------------------CcH-HHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 777776665542 222 2222222232332233344567788999999999999999999
Q ss_pred HHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccCC
Q 045073 319 AGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETNG 368 (402)
Q Consensus 319 ~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~~ 368 (402)
...++..++|.+.+.+.+.. +|+..+++.+++.++..++.+ ++||++.
T Consensus 135 ~~~i~~~~~~~i~~~l~~~~--g~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 183 (392)
T PRK10473 135 ITCIIPVLAPVLGHLIMLKF--PWQSLFYTMAAMGILVLLLSLFILKETRP 183 (392)
T ss_pred HHHHHHHHHHHHHHHHHhCc--ChHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 99999999998888877665 888888888877776655544 4476643
No 128
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.47 E-value=5.6e-12 Score=111.41 Aligned_cols=293 Identities=16% Similarity=0.139 Sum_probs=186.0
Q ss_pred hhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCc-ccccccccccCCCCCchhHHHHHHhHHHHH
Q 045073 6 AVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAP-AFNRNHVLSAQPQGDYLWRIVLMFGAVPAA 84 (402)
Q Consensus 6 ~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~ 84 (402)
.+++.+..++++-++..++-.....+|..+.-++........+.. ... ...+.| +.+...=|..+.++++.-+
T Consensus 137 ds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~-~~~~~l~~l~-----~~~~~~~ri~~~l~A~W~l 210 (438)
T COG2270 137 DSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQT-GITIILLGLP-----PADGEDVRITGLLAALWWL 210 (438)
T ss_pred hhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhccccc-ceeEEeeccC-----ccccccchhHHHHHHHHHH
Confidence 467788889988888888777777777777766654333111000 000 000001 1133456788887666554
Q ss_pred H-HHHHHhhccCCchhHHhhhCChhHHH-HHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073 85 L-TYYWRMKMPETARYTALVEGNQKKAA-VDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW 162 (402)
Q Consensus 85 ~-~~~~~~~~pesp~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (402)
+ .+.++...||.++- ........ +..++ .++.++....++ .+.......
T Consensus 211 i~~iPm~~~v~~~~~~----~~~~~~~l~~g~k~----------------------L~~t~k~i~~~~---~i~~FLiA~ 261 (438)
T COG2270 211 LFALPMILNVHDAEKI----SSPPPTALRNGFKE----------------------LKSTFKEIRGRK---NLVLFLIAR 261 (438)
T ss_pred HHHhHHHhcccccccc----cccchHHHHHHHHH----------------------HHHHHHHHhccc---chHHHHHHH
Confidence 4 55555666665431 00000100 00110 001111111122 233333344
Q ss_pred HHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHH
Q 045073 163 FLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMS 241 (402)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~ 241 (402)
+...-+..+...+...+.. ++|++..+... ......+.+++|+++.|++.||+|.|+++..+.++..
T Consensus 262 ~~~~DGv~til~~~~~fg~~~~gls~~~lll------------~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~ 329 (438)
T COG2270 262 FFYIDGVNTILAMGGVFGAADLGLSSTELLL------------IGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILS 329 (438)
T ss_pred HHHHhhHHHHHHHHHHHHHHHcCccHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHH
Confidence 4444455566666666665 78999887655 6777788899999999999999999999988877666
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHH
Q 045073 242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGK 321 (402)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 321 (402)
+..+...+.. . .....++.+..+.+..+.++..-++.+++.|++.-+...|+++..++
T Consensus 330 ~~~~~~~~~~--------------------~--~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgr 387 (438)
T COG2270 330 IAALYLIFLE--------------------G--ELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGR 387 (438)
T ss_pred HHHHHHHHcc--------------------c--cHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhh
Confidence 6554444321 1 12333444444555566777888999999999999999999999999
Q ss_pred HhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccCC
Q 045073 322 AGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETNG 368 (402)
Q Consensus 322 ~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~~ 368 (402)
..+++||++.+.+.+.++ +.+..+....++.++++++.+.+|+.++
T Consensus 388 a~S~~gp~lv~v~t~iTg-~~r~g~~~i~vll~iGl~~L~~v~~~~~ 433 (438)
T COG2270 388 AASFLGPFLVAVITQITG-SSRAGVLSIIVLLLIGLLLLLRVKVPGR 433 (438)
T ss_pred HHHHHHHHHHHHHHHHhc-chhhHHHHHHHHHHhhHhhEEeecCCCC
Confidence 999999999999999886 5677777778888889888888765533
No 129
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.46 E-value=1.7e-12 Score=120.80 Aligned_cols=165 Identities=15% Similarity=0.075 Sum_probs=117.8
Q ss_pred HHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 045073 168 AFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAIL 247 (402)
Q Consensus 168 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~ 247 (402)
.........|.+.++++.+..+.+. ......++..++.++.|+++||+|||+.+..+....+++.+..
T Consensus 28 ~~~~~~~~~~~~~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 95 (406)
T PRK15402 28 ANDMIQPGMLAVVEDFNAGAEWVPT------------SMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAI 95 (406)
T ss_pred hhhhHhcchHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 3344444556677889988776554 5667778888888999999999999999998887777776665
Q ss_pred HHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHH
Q 045073 248 GARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVG 327 (402)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~ 327 (402)
... .+. ..........+.......+...++..|.+|++.|.++.++......++..++
T Consensus 96 ~~~---------------------~~~-~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g 153 (406)
T PRK15402 96 LLA---------------------QSI-EQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLG 153 (406)
T ss_pred HHH---------------------ccH-HHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHH
Confidence 543 222 2222233332322223334566778899999999999999888888889999
Q ss_pred hHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccCC
Q 045073 328 AFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETNG 368 (402)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~~ 368 (402)
|.+.+.+.+.. +|+..+++.+++.++..+..+ ..||+++
T Consensus 154 ~~i~~~l~~~~--~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (406)
T PRK15402 154 PLVGAALIHVL--PWRGMFVLFAALAALSFFGLWRAMPETAG 193 (406)
T ss_pred HHHHHHHHHcc--CccHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 99988888766 899999888888777666544 3476643
No 130
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.46 E-value=2.6e-12 Score=121.15 Aligned_cols=164 Identities=13% Similarity=0.012 Sum_probs=108.9
Q ss_pred HHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 045073 171 TINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGAR 250 (402)
Q Consensus 171 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~ 250 (402)
......|.+.++ |++..+.+. ......++..++.++.|+++||+|||+++..+.++.+++.+++.+.
T Consensus 47 ~~~~~~p~l~~~-g~s~~~~g~------------~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~ 113 (452)
T PRK11273 47 NFALAMPYLVEQ-GFSRGDLGF------------ALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFV 113 (452)
T ss_pred HHHHhhHHHHHc-CCCHHHHHH------------HHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhh
Confidence 345566776666 888887665 6777888888999999999999999999999988877777666553
Q ss_pred hhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHH-HHhH
Q 045073 251 YDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAI-VGAF 329 (402)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~-i~~~ 329 (402)
... ......+.+.....+.+.....+.....+.|.+|++.|+++.|+.+....+|+. .++.
T Consensus 114 ~~~------------------~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l 175 (452)
T PRK11273 114 PWA------------------TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLL 175 (452)
T ss_pred hcc------------------cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 110 111222222223333333333444456678999999999999999888888764 4554
Q ss_pred hHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccC
Q 045073 330 GVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETN 367 (402)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~ 367 (402)
......... +|+..|++.+++.++..++.+ ++||+.
T Consensus 176 ~~~~~~~~~--gw~~~f~i~~~~~~~~~~l~~~~~~~~~ 212 (452)
T PRK11273 176 FLLGMAWFN--DWHAALYMPAFAAILVALFAFAMMRDTP 212 (452)
T ss_pred HHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHccCCH
Confidence 332232222 889999888877666544443 456653
No 131
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.46 E-value=1.1e-12 Score=119.97 Aligned_cols=165 Identities=18% Similarity=0.024 Sum_probs=118.5
Q ss_pred HHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 045073 168 AFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAIL 247 (402)
Q Consensus 168 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~ 247 (402)
.........|.+..+.+.+..+.+. ......++.+++.++.|+++||+|||+.+..+..+..++.++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~s~~~~g~------------~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 14 GTAITQVALPLYVLAGTGSASVLSL------------AALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHH------------HHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHH
Confidence 3334444556677777777776554 7777788888899999999999999999998887777766655
Q ss_pred HHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHH
Q 045073 248 GARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVG 327 (402)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~ 327 (402)
....... ......+.+.....+.+.....+...++..|.+|++.|+++.++.+....+|.+++
T Consensus 82 ~~~~~~~-----------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 144 (365)
T TIGR00900 82 PFVALLG-----------------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVG 144 (365)
T ss_pred HHHHHcC-----------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHH
Confidence 5442110 11222333333333333344455677889999999999999999999999999999
Q ss_pred hHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073 328 AFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 363 (402)
|.+.+.+.+.. +|+..|++.++..++..++.+.+
T Consensus 145 ~~l~~~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 145 PGIGGLMYATL--GIKWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred HHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999988877 89988888777666665554433
No 132
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.45 E-value=3e-12 Score=121.02 Aligned_cols=175 Identities=9% Similarity=0.003 Sum_probs=124.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhc-c
Q 045073 150 KHGLHLLGTTSTWFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDR-I 227 (402)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~ 227 (402)
++++.++.+++..+.....+|+...+++.|++ ++|++..+.+. ..........+..+++|+++|| +
T Consensus 11 ~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~------------i~~~~~~~~~~~~~~~G~laDr~~ 78 (489)
T PRK10207 11 QQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFI------------TFGAFAALVYGLISIGGYVGDHLL 78 (489)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHhhHHHhhhhcc
Confidence 34456777777777778899999988888875 48887776443 3333333444445689999999 9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccc
Q 045073 228 GRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPAR 307 (402)
Q Consensus 228 grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 307 (402)
|||+.++.+.++.+++.+.+.+.. .....+.+.....+.+.....+...+++.|.+|++
T Consensus 79 G~r~~~~~g~~~~~~g~~~~~~~~---------------------~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~ 137 (489)
T PRK10207 79 GTKRTIVLGAIVLAIGYFMTGMSL---------------------LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPK 137 (489)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhc---------------------cchhHHHHHHHHHHhccccccCCHHHHHHHhcCCC
Confidence 999999999999888887766531 11112222222333334445566778899999887
Q ss_pred --hhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhh
Q 045073 308 --LRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLC 359 (402)
Q Consensus 308 --~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~ 359 (402)
.|+.+.++.....++|.+++|.+.+++.+.. +|++.|++.++..+++.+.
T Consensus 138 ~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~--gw~~~F~i~~i~~~~~~~~ 189 (489)
T PRK10207 138 DPRLDGAFTLFYMSINIGSLISLSLAPVIADKF--GYSVTYNLCGAGLIIALLV 189 (489)
T ss_pred chhhhcchhHHHHHHHHHHHHHHHHHHHHHHhh--ChHHHHHHHHHHHHHHHHH
Confidence 4577899999999999999999999999887 8999998865544444433
No 133
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.45 E-value=1.7e-11 Score=115.76 Aligned_cols=143 Identities=15% Similarity=0.101 Sum_probs=86.7
Q ss_pred HHHHHHhhhhhhhhhHH----Hhhhc-cchhHHH--HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHH
Q 045073 205 MFLVALFATVPGYWFTV----FLIDR-IGRFIIQ--LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWF 277 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g----~l~dr-~grr~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (402)
...++.+..++...+.. ++.+| .+.+... .+|+++.+++++.+++........ ...+.++
T Consensus 317 ~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~-------------~~~s~~~ 383 (475)
T TIGR00924 317 FQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAG-------------GLTSPWF 383 (475)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCC-------------CccCHHH
Confidence 44444444444444433 34443 2223333 567777777766665432211110 0122333
Q ss_pred HHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHh
Q 045073 278 MILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGF 357 (402)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 357 (402)
.+...+..+.+.....|...++..+..|++.||+.+|+......+|..+++.+.....+.. ++...|...++..++..
T Consensus 384 ~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 461 (475)
T TIGR00924 384 MVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQ--GVTGVFGKIGLVTLLVG 461 (475)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--chhhHHHHHHHHHHHHH
Confidence 3333444445556667788889999999999999999999999999999988877665543 56667777666666555
Q ss_pred hheee
Q 045073 358 LCSFM 362 (402)
Q Consensus 358 i~~~~ 362 (402)
++.++
T Consensus 462 ~~~~~ 466 (475)
T TIGR00924 462 VVMAL 466 (475)
T ss_pred HHHHH
Confidence 55443
No 134
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.44 E-value=1.2e-12 Score=124.29 Aligned_cols=142 Identities=20% Similarity=0.095 Sum_probs=104.7
Q ss_pred HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073 205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT 284 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (402)
......++..++.++.|+++||+|||+.+..+.++..++.++...... ......+++...+
T Consensus 76 ~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~r~l 136 (481)
T TIGR00879 76 VVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAF-------------------ALSVEMLIVGRVL 136 (481)
T ss_pred HHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhcc-------------------ccchHHHHHHHHH
Confidence 677788889999999999999999999999988887777666644311 1111233333333
Q ss_pred HHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhH---HhhhhccCCcchhhHHHHHHHHHHHhhhee
Q 045073 285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGV---QYYTQKGDKQIKQSIITLAVVNFLGFLCSF 361 (402)
Q Consensus 285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~ 361 (402)
.+.+.....+....++.|.+|++.|+++.++.+....+|.++++.+. ....+.. +|++.|++.++..++..+..+
T Consensus 137 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~--~w~~~f~~~~~~~~~~~~~~~ 214 (481)
T TIGR00879 137 LGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTL--GWRIPLGLQLIPAGLLFLGLF 214 (481)
T ss_pred HHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCc--cHHHHHHHHHHHHHHHHHHHh
Confidence 34333444556778899999999999999999999999999999887 4444444 899999987776666666666
Q ss_pred eeeccC
Q 045073 362 MVPETN 367 (402)
Q Consensus 362 ~~~et~ 367 (402)
++||+.
T Consensus 215 ~l~~~~ 220 (481)
T TIGR00879 215 FLPESP 220 (481)
T ss_pred cCCCCh
Confidence 677764
No 135
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.44 E-value=1.8e-12 Score=119.45 Aligned_cols=178 Identities=17% Similarity=0.092 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073 154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ 233 (402)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~ 233 (402)
.++...+..+......+......|.+.+++|.+..+.+. ......++..++.++.|++.||+|||+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~------------~~s~~~~~~~~~~~~~g~l~dr~g~r~~~ 71 (382)
T PRK10091 4 VILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGH------------MISYYALGVVVGAPIIALFSSRYSLKHIL 71 (382)
T ss_pred hHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhH------------HHHHHHHHHHHHHHHHHHHHccCccHHHH
Confidence 344555555555556666677788888999998887665 67778888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073 234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH 313 (402)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 313 (402)
..+..+.+++.++.... .+. ..+.+.....+.......+....+..|.+|++.|+.+.
T Consensus 72 ~~~~~~~~~~~~l~~~~---------------------~~~-~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (382)
T PRK10091 72 LFLVALCVIGNAMFTLS---------------------SSY-LMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAV 129 (382)
T ss_pred HHHHHHHHHHHHHHHHh---------------------CcH-HHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHH
Confidence 99988888877766553 222 33333333333322222334456678999999999999
Q ss_pred hHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccC
Q 045073 314 GISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETN 367 (402)
Q Consensus 314 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~ 367 (402)
++......++..+++.+.+.+.+.. +|++.|.+.+++.++..+..+ ++||.+
T Consensus 130 ~~~~~~~~~g~~~g~~l~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 130 AGMVSGMTVANLLGIPLGTYLSQEF--SWRYTFLLIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred HHHHHHHHHHHHHhccHHHHHhhhc--cHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999888999999999888887766 899999988887766555433 457653
No 136
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.43 E-value=2.5e-12 Score=120.79 Aligned_cols=181 Identities=13% Similarity=0.032 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073 154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ 233 (402)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~ 233 (402)
.++...+.+..............|.+.+ .|.+..+.+. ......++..++.++.|+++||+|||+.+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~------------~~~~~~~~~~~~~~~~G~l~dr~g~~~~~ 94 (438)
T TIGR00712 28 VFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGF------------ALSAISIAYGFSKFIMGSVSDRSNPRVFL 94 (438)
T ss_pred HHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHH------------HHHHHHHHHHHhhhccchhhhccCCceeh
Confidence 3344444444433333334445565554 6888876655 67777888889999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073 234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH 313 (402)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 313 (402)
..+.++.+++.+....... . ........+.....+.......+.....+.|.+|++.|+++.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~----~--------------~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~ 156 (438)
T TIGR00712 95 PAGLILSAAVMLLMGFVPW----A--------------TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIV 156 (438)
T ss_pred HHHHHHHHHHHHHHhcccc----c--------------cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHH
Confidence 8887777776655443210 0 111222222222333323333445566778999999999999
Q ss_pred hHHHHHHHHhHHHHhHhHHhhhh-ccCCcchhhHHHHHHHHHHHhhhee-eeeccC
Q 045073 314 GISAAAGKAGAIVGAFGVQYYTQ-KGDKQIKQSIITLAVVNFLGFLCSF-MVPETN 367 (402)
Q Consensus 314 ~~~~~~~~~g~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~ 367 (402)
++.+....+++.+++.+.+...+ .. +|+..|++.+++.++..+..+ ++||++
T Consensus 157 ~~~~~~~~~g~~~~~~l~~~~~~~~~--~w~~~f~~~~~~~~i~~~~~~~~~~~~~ 210 (438)
T TIGR00712 157 SIWNCAHNIGGGIPPLLVLLGMAWFN--DWHAALYFPAICAIIVALFAFAMMRDTP 210 (438)
T ss_pred HHHHHHHHhHhHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 99999999999988877665443 23 899999998888776554444 456643
No 137
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.43 E-value=2.6e-12 Score=122.33 Aligned_cols=151 Identities=16% Similarity=0.046 Sum_probs=107.8
Q ss_pred HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073 205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT 284 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (402)
......++.+++.++.|+++||+|||++++.+..+.+++.+..+........... .+...+..+++..+.
T Consensus 60 ~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~R~l 129 (479)
T PRK10077 60 CVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGP----------DNTGYVPEFVIYRII 129 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccc----------cchhHHHHHHHHHHH
Confidence 7778888899999999999999999999999988877776655542111100000 001223334455555
Q ss_pred HHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhh--------hccCCcchhhHHHHHHHHHHH
Q 045073 285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYT--------QKGDKQIKQSIITLAVVNFLG 356 (402)
Q Consensus 285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~i~ 356 (402)
.+.+..+..+...++++|.+|++.|+++.++......+|..+++.+...+. +.. +|++.|++.+++.++.
T Consensus 130 ~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~--gWr~~f~~~~~~~~~~ 207 (479)
T PRK10077 130 GGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTD--GWRYMFASEAIPALLF 207 (479)
T ss_pred HhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccC--ChHHHHHHHHHHHHHH
Confidence 555556666778889999999999999999999888888888876554432 222 8999999888777776
Q ss_pred hhheeeeeccC
Q 045073 357 FLCSFMVPETN 367 (402)
Q Consensus 357 ~i~~~~~~et~ 367 (402)
.+..+++||+.
T Consensus 208 ~~~~~~l~~s~ 218 (479)
T PRK10077 208 LMLLYFVPETP 218 (479)
T ss_pred HHHHHcCCCCc
Confidence 66666678874
No 138
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.43 E-value=2.4e-12 Score=117.47 Aligned_cols=164 Identities=12% Similarity=0.039 Sum_probs=114.9
Q ss_pred HHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 045073 168 AFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAIL 247 (402)
Q Consensus 168 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~ 247 (402)
.........|.+.+++|.+..+.+. ......++..++.+..|+++||+|||+++..+......+.. .
T Consensus 6 ~~~~~~~~lp~i~~~~~~s~~~~g~------------~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~-~ 72 (368)
T TIGR00903 6 IWVTFSPVLSLVAEDIDVSKEELGL------------LAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAG-R 72 (368)
T ss_pred HHHHHHhhHHHHHHHhCcCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH-H
Confidence 4445556678888899999887665 66667778888888999999999999876655433333221 1
Q ss_pred HHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHH
Q 045073 248 GARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVG 327 (402)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~ 327 (402)
... ......+.+..+..+.+... ........+|.+|++.|+++.++......+|..++
T Consensus 73 ~~~---------------------~~~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~ 130 (368)
T TIGR00903 73 LLD---------------------PFNYEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFA 130 (368)
T ss_pred HHH---------------------hccHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 11223344444443333222 33445556899999999999999999999999999
Q ss_pred hHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccCC
Q 045073 328 AFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETNG 368 (402)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~~ 368 (402)
+.+.+.+.+.. +|+..|.+.+++.++..++.+ ++||+++
T Consensus 131 ~~~~~~l~~~~--gWr~~f~~~~~l~~~~~~~~~~~lp~~p~ 170 (368)
T TIGR00903 131 LAAGLKIYTAG--GLQLLIIPIAAVAAAGIILVLAALPALPF 170 (368)
T ss_pred HHHHHHHHHcc--chHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 99999888776 999999998888776655544 4577543
No 139
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.42 E-value=3.5e-12 Score=118.18 Aligned_cols=178 Identities=12% Similarity=0.001 Sum_probs=121.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073 154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ 233 (402)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~ 233 (402)
.++....................|.+.+++|.++.+.+. ......++..++.++.|+++||+|||+.+
T Consensus 9 ~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~G~l~Dr~grr~~~ 76 (394)
T PRK11652 9 LLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQA------------VMAAYLLTYGLSQLFYGPLSDRVGRRPVI 76 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHhhhhHHHhcCChHHH
Confidence 444444444444444444455568888889999887655 66777888888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073 234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH 313 (402)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 313 (402)
..+..+..++.++.... .+. ..+.+.....+.+.....+....+..|.++.+.|+.+.
T Consensus 77 ~~~~~~~~~~~~~~~~~---------------------~~~-~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (394)
T PRK11652 77 LVGMSIFILGTLVALFA---------------------HSL-TVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHAN 134 (394)
T ss_pred HHHHHHHHHHHHHHHHH---------------------ccH-HHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHH
Confidence 98887777666554442 122 22222222222222222334455678888989999999
Q ss_pred hHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhe-eeeeccC
Q 045073 314 GISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCS-FMVPETN 367 (402)
Q Consensus 314 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~-~~~~et~ 367 (402)
++.+....++..++|.+.+.+.+.. +|+..|++.++..++..+.. ++.||++
T Consensus 135 ~~~~~~~~~~~~~g~~i~~~l~~~~--g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 135 SLLNMGILVSPLLAPLIGGLLTTLF--GWRACYLFLLLLGAGVTFSMARWMPETR 187 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc--ChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 9998888899999999998888766 89999988877666544433 3457754
No 140
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.42 E-value=7.3e-12 Score=117.42 Aligned_cols=188 Identities=13% Similarity=0.048 Sum_probs=119.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhcC---cchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhH
Q 045073 155 LLGTTSTWFLLDIAFYTINLAQKDIYPATG---IVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFI 231 (402)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~ 231 (402)
+....+.++.............|.+.++++ .+..+.+ ..........++..+|.+++|+++||+|||+
T Consensus 24 ~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~ 94 (432)
T PRK10406 24 IVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLL---------QTAGVFAAGFLMRPIGGWLFGRIADKHGRKK 94 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHhcCcHH
Confidence 334444455544555555556676666664 3332211 1122345556777799999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhh
Q 045073 232 IQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRST 311 (402)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 311 (402)
.+..+.++.+++.++.++...+.... ......+.+..+..+.+..+..+...++++|.+|++.|+.
T Consensus 95 ~l~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~ 160 (432)
T PRK10406 95 SMLISVCMMCFGSLVIACLPGYETIG--------------TWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGF 160 (432)
T ss_pred HHHHHHHHHHHHHHHHhhcCCchhHH--------------HHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccH
Confidence 99999988888887766532100000 0011234444445555555566778889999999999999
Q ss_pred hhhHHHHHHHHhHHHHhHhHHhhhh--------ccCCcchhhHHHHHHHHHHHhhheeeeeccC
Q 045073 312 CHGISAAAGKAGAIVGAFGVQYYTQ--------KGDKQIKQSIITLAVVNFLGFLCSFMVPETN 367 (402)
Q Consensus 312 ~~~~~~~~~~~g~~i~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~ 367 (402)
..++.......|.++++.+...+.. .. +|+.+|++.++..++...+...+||++
T Consensus 161 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~--gWr~~F~i~~~~~ll~~~~~~~~~e~~ 222 (432)
T PRK10406 161 YASFQYVTLIGGQLLALLVVVVLQQTLEDAELREW--GWRIPFALGAVLAVVALWLRRQLDETS 222 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhcc--chHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 9888877777777777655444321 23 899999987777766654433456653
No 141
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.42 E-value=3.9e-12 Score=118.33 Aligned_cols=158 Identities=15% Similarity=0.107 Sum_probs=115.2
Q ss_pred hhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcc
Q 045073 175 AQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSL 254 (402)
Q Consensus 175 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~ 254 (402)
-+|.+.++++.+....+. ......++..++.++.|+++||+|||+++..+..+.+++.++....
T Consensus 38 ~l~~i~~~~~~~~~~~~~------------~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a---- 101 (413)
T PRK15403 38 GIINVVRDFNADVSLAPA------------SVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT---- 101 (413)
T ss_pred CHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc----
Confidence 345566678887776554 5566677788888899999999999999999888777776665542
Q ss_pred cCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhh
Q 045073 255 RGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYY 334 (402)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~ 334 (402)
.+ ...+.+..+..+.+.....+..+++..|.+|++.|+++.++......++..++|.+.+.+
T Consensus 102 -----------------~~-~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l 163 (413)
T PRK15403 102 -----------------TS-MTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAAL 163 (413)
T ss_pred -----------------CC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 223333333333322222334567788999999999999999999999999999998888
Q ss_pred hhccCCcchhhHHHHHHHHHHHhhhee-eeeccCC
Q 045073 335 TQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETNG 368 (402)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~~ 368 (402)
.+.. +|++.|++.+++.++..+..+ .+||+++
T Consensus 164 ~~~~--gw~~~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 164 MHFV--HWKVLFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHhc--CHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 8766 899999998888777766544 4588754
No 142
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.41 E-value=1.2e-13 Score=122.93 Aligned_cols=184 Identities=18% Similarity=0.104 Sum_probs=144.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073 154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ 233 (402)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~ 233 (402)
....+++......+--|.+....+..-+.++.+++..++ +.....+..+++++++|++.||+.|++++
T Consensus 34 ~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gl------------l~~vf~v~~~i~sPl~gyLadryNR~~v~ 101 (493)
T KOG1330|consen 34 TLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGL------------LQTVFIVVFMIASPLFGYLADRYNRKRVI 101 (493)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccc------------hhHHHHHHHHHHHHHHHHHHhhcCcceEE
Confidence 455555555555566666655556666668888887776 78888889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073 234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH 313 (402)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 313 (402)
.+|..+-.++.+..++. ...+.+.++..+.+.+-....++..++++|.+|...|+++.
T Consensus 102 ~vG~~iW~~Av~~~~fs----------------------~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~ 159 (493)
T KOG1330|consen 102 AVGIFIWTLAVFASGFS----------------------NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVL 159 (493)
T ss_pred eeHHHHHHHHHHHHHHH----------------------HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHH
Confidence 99998888888777774 33455666666666667788889999999999999999999
Q ss_pred hHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheee-eeccCCcccc
Q 045073 314 GISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM-VPETNGLSLE 372 (402)
Q Consensus 314 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~et~~~~~~ 372 (402)
++.+....+|..+|-.....+.+... .|++.|...+++.++..++.++ .+|.+++..+
T Consensus 160 ~ify~~ipvGsglG~vvgs~va~~~~-~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~ 218 (493)
T KOG1330|consen 160 GIFYFAIPVGSGLGYVVGSVVASLTF-WWRWAFRGSAVLGVIVGLLVFLFVREPERGARD 218 (493)
T ss_pred HHhhhhcccccceeEEeeeeeccCcc-ceEEEEEeehHHHHHHHHHHHhhccCccccccc
Confidence 99999999999999888888777764 4999999999999888777664 4555444333
No 143
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.40 E-value=9.5e-12 Score=115.50 Aligned_cols=178 Identities=11% Similarity=-0.036 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHH
Q 045073 154 HLLGTTSTWFLLDIAFYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFII 232 (402)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~ 232 (402)
.+.......+............+|.+. +++|.+..+.+. ......++..++.++.|+++||+|||++
T Consensus 16 ~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~------------~~~~~~~~~~i~~~~~G~l~Dr~g~r~~ 83 (399)
T PRK05122 16 RIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGL------------VISLQYLATLLSRPHAGRYADTLGPKKA 83 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHH------------HHHHHHHHHHHhchhhHhHHhccCCcch
Confidence 344444555555555555666677755 568888887665 7777788888889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhh
Q 045073 233 QLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTC 312 (402)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~ 312 (402)
+..+.++.+++.+............ ......+++..+..+.+.....+....+..|.+|++.|+++
T Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~ 149 (399)
T PRK05122 84 VVFGLCGCALSGLLYLLAGLLAAWP--------------VLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRV 149 (399)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhccc--------------hhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccc
Confidence 9998877766655444322100000 01122333333343433444445566677899999999999
Q ss_pred hhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhh
Q 045073 313 HGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLC 359 (402)
Q Consensus 313 ~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~ 359 (402)
.++......+|..+++.+.+.+.+.. +|+..+++.+++.++..+.
T Consensus 150 ~~~~~~~~~~g~~~g~~l~~~l~~~~--g~~~~~~~~~~~~~~~~~~ 194 (399)
T PRK05122 150 ISWNGIATYGALAIGAPLGVLLYHWG--GLAGLGLLIMLLALLGLLL 194 (399)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHcc--cHHHHHHHHHHHHHHHHHH
Confidence 99988888889999999998888876 8888777766655544433
No 144
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.40 E-value=4.8e-11 Score=104.90 Aligned_cols=275 Identities=13% Similarity=0.007 Sum_probs=162.5
Q ss_pred cchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCC-CCCchhHHHHHHhHHH
Q 045073 4 LSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQP-QGDYLWRIVLMFGAVP 82 (402)
Q Consensus 4 ~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Wr~~f~~~~i~ 82 (402)
.+..|++...|++...+.+++.+...++|.+++|.++..+...-.. .+. ..+...... .....||+++...+..
T Consensus 124 aaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~--~~~---~~~~~~~~~~~~~~~v~~pYl~~~~~ 198 (422)
T COG0738 124 AANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVA--LTM---SAAQILAIKGADASSVQFPYLILAGL 198 (422)
T ss_pred ccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhh--hcc---CHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 4678999999999999999999999999999999999888631000 000 000000000 0122477788775544
Q ss_pred HHHHHHHHh--hccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073 83 AALTYYWRM--KMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS 160 (402)
Q Consensus 83 ~~~~~~~~~--~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (402)
.++..+... .+||.+.- ..++. +.++... ......+ .+....+
T Consensus 199 lvll~v~~~~~k~p~~~~~------~~~~~----------------------~~~~~~~----~~l~~~~---~~~~gvl 243 (422)
T COG0738 199 LVLLAVLILLSKLPDLQVA------APSLG----------------------ASGSAGL----SSLFQNK---HLRLGVL 243 (422)
T ss_pred HHHHHHHHHhccCCcCCcc------ccccc----------------------ccccchH----HHHHhCh---HHHHHHH
Confidence 444433332 23432110 00000 0000000 1111222 3344444
Q ss_pred HHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073 161 TWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL 239 (402)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~ 239 (402)
..|++...-.+...|++.++.+ .|.+..++.. ..+..+.+.++|++++.++..|+...+.+.+..++
T Consensus 244 ~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~------------~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~ 311 (422)
T COG0738 244 AIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAY------------YLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALI 311 (422)
T ss_pred HHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 4444444555666778888877 6777665554 78888899999999999999999998888877655
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073 240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA 319 (402)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 319 (402)
..+.++...+. ++.+....+ . ..+.+....+|+.++...+..| ++-+.+ |.....
T Consensus 312 ~ill~~~~~l~---------------------~g~v~~~~l-~-~ig~F~simfPTIfslal~~l~-~~ts~~-s~~l~m 366 (422)
T COG0738 312 AILLLLAVALI---------------------GGVVALYAL-F-LIGLFNSIMFPTIFSLALKNLG-EHTSVG-SGLLVM 366 (422)
T ss_pred HHHHHHHHHHh---------------------cChHHHHHH-H-HHHHHhHHHHHHHHHHHHhccC-cccccc-ceeeee
Confidence 55544444443 222222222 2 2233355667889999999999 333333 444456
Q ss_pred HHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHh
Q 045073 320 GKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGF 357 (402)
Q Consensus 320 ~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 357 (402)
..+|+++.|.+.|++.|.. +....+.+...+|.+..
T Consensus 367 aivGGAiiP~l~G~i~d~~--g~~~~~~~~pllc~lyV 402 (422)
T COG0738 367 AIVGGAIIPPLQGVIADMF--GIQLTFLIVPLLCYLYV 402 (422)
T ss_pred heecchHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHH
Confidence 6689999999999999987 55555544444444333
No 145
>PRK12382 putative transporter; Provisional
Probab=99.40 E-value=7.2e-12 Score=116.01 Aligned_cols=173 Identities=13% Similarity=-0.024 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073 155 LLGTTSTWFLLDIAFYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ 233 (402)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~ 233 (402)
++...+..+............+|.++ +++|.+..+.+. ......+...++.++.|+++||+|||+.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~------------~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l 84 (392)
T PRK12382 17 LFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGI------------AVGIQFLATVLTRGYAGRLADQYGAKRSA 84 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHH------------HHHHHHHHHHHHhhhhhHHHHhhcchHHH
Confidence 33344444444444445555666654 678998887665 77778888888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073 234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH 313 (402)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 313 (402)
..+.+...++.+............ ......+.+.....+.+.....+...++..|.+|++.|+++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~ 150 (392)
T PRK12382 85 LQGMLACGLAGLAYLLAAILPVSA--------------PFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVM 150 (392)
T ss_pred HHHHHHHHHHHHHHHhhhccccch--------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhh
Confidence 988776655543322221100000 112233333333333333333344556778999999999999
Q ss_pred hHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHH
Q 045073 314 GISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFL 355 (402)
Q Consensus 314 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 355 (402)
++......++..++|.+.+.+.+.. +|+..+.+..+..++
T Consensus 151 ~~~~~~~~~g~~~g~~~~~~l~~~~--g~~~~~~~~~~~~~~ 190 (392)
T PRK12382 151 SWNGMAMYGALAAGAPLGLLLHSHF--GFAALALTTMVLPLL 190 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcc--ChHHHHHHHHHHHHH
Confidence 9999888899999999988887766 787766655444333
No 146
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.40 E-value=3.6e-12 Score=117.39 Aligned_cols=161 Identities=16% Similarity=0.109 Sum_probs=120.3
Q ss_pred HHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 045073 171 TINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGAR 250 (402)
Q Consensus 171 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~ 250 (402)
......|.+.+++|.++.+.+. ......++..++.++.|+++||+|||+.+..+.++.+++.+.+...
T Consensus 9 ~~~p~~~~~~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~ 76 (377)
T PRK11102 9 MYLPALPVIAADFGVSAGSVQM------------TLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA 76 (377)
T ss_pred HHhccHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 3345667888889998887665 6677778888899999999999999999999988887777766553
Q ss_pred hhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHh
Q 045073 251 YDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFG 330 (402)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~ 330 (402)
.+. ....+.....+.+.....+...++..|.+|++.|+++.++.+....+|..++|.+
T Consensus 77 ---------------------~~~-~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 134 (377)
T PRK11102 77 ---------------------QTI-DQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPII 134 (377)
T ss_pred ---------------------ccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222 2222233333333333344566788999999999999999999999999999999
Q ss_pred HHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccC
Q 045073 331 VQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETN 367 (402)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~ 367 (402)
.+.+.+.. +|+..|++.+++.++..++.. ++||++
T Consensus 135 ~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (377)
T PRK11102 135 GGWLLVWF--SWHAIFWVLALAAILAAALVFFFIPETL 170 (377)
T ss_pred HHHHHHHc--ChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 99888876 899999888877776655543 456654
No 147
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.39 E-value=4.8e-12 Score=119.85 Aligned_cols=178 Identities=15% Similarity=0.058 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHH
Q 045073 155 LLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQL 234 (402)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~ 234 (402)
+...++.++.....-.......|.+.+++|.+..+.+. ......++..++.++.|+++||+|||+++.
T Consensus 31 ~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~------------~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~ 98 (467)
T PRK09556 31 YLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGM------------IGLGFSITYGVGKTLVGYYADGKNTKQFLP 98 (467)
T ss_pred HHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHhhhhhHhhccCccchHH
Confidence 33334444443334444555678888899999887665 666777888888899999999999999998
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhh
Q 045073 235 GGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHG 314 (402)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~ 314 (402)
.+.++.++..+.++...... ......+.+.....+.+.....+....+++|.+|++.|+++.|
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~g 161 (467)
T PRK09556 99 FLLILSAICMLGFGASLGSG-----------------SVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLG 161 (467)
T ss_pred HHHHHHHHHHHHHHHHHhcc-----------------cchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEE
Confidence 88877777766665532111 1223333334444444444445677788999999999999999
Q ss_pred HHHHHHHHhHHHHhHhHHhhhhcc-CCcchhhHHHHHHHHHHHhhhee
Q 045073 315 ISAAAGKAGAIVGAFGVQYYTQKG-DKQIKQSIITLAVVNFLGFLCSF 361 (402)
Q Consensus 315 ~~~~~~~~g~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~i~~~ 361 (402)
+......+|.++++.+........ ..+|+..|.+.+++.++..++.+
T Consensus 162 i~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~ 209 (467)
T PRK09556 162 FWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGL 209 (467)
T ss_pred eeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHH
Confidence 999999999999988776655432 11477777776766655444433
No 148
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.39 E-value=6.8e-12 Score=118.87 Aligned_cols=137 Identities=12% Similarity=0.044 Sum_probs=106.0
Q ss_pred HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073 205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT 284 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (402)
......++.+++.++.|+++||+|||+.+..+.++.+++.++...... ......++..+.
T Consensus 81 ~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~--------------------~~~~~l~~~r~~ 140 (465)
T TIGR00894 81 ILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAG--------------------GGIALVVFCRVI 140 (465)
T ss_pred HHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHH--------------------cCchHHHHHHHH
Confidence 677778888999999999999999999999888777776655443211 112234444455
Q ss_pred HHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhc-cCCcchhhHHHHHHHHHHHhhheeee
Q 045073 285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQK-GDKQIKQSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~i~~~~~ 363 (402)
.+.+.....+....+++|.+|++.|+++.++......+|.++++.+.+.+.+. . +|+.+|++.+++.++..++.+++
T Consensus 141 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~--gw~~~f~i~~~~~~~~~~~~~~~ 218 (465)
T TIGR00894 141 QGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWG--GWPMIFYVFGIVGCAWSLLWFVF 218 (465)
T ss_pred HHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCCeehhhhhHHHHHHHHHHHHH
Confidence 55555666677788999999999999999999999999999999999988776 4 89999999888877666555544
No 149
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.38 E-value=1.8e-11 Score=113.98 Aligned_cols=176 Identities=22% Similarity=0.230 Sum_probs=122.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHH
Q 045073 159 TSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFL 238 (402)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~ 238 (402)
.+..+...........++|.+.+++|.+..+... ...+.......+...++.++.|+++||+|||+.+..+.+
T Consensus 20 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~-------~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 92 (408)
T PRK09874 20 WLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALN-------MWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSAL 92 (408)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHH-------HHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHH
Confidence 3344444556666677889998888887553210 012236667777888888999999999999999998887
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHH
Q 045073 239 LMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAA 318 (402)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~ 318 (402)
..+++.+++... .+. ....+.....+.. .+..+....+..+.+|++.|+.+.++...
T Consensus 93 ~~~~~~~~~~~~---------------------~~~-~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (408)
T PRK09874 93 GMGIVMVLMGLA---------------------QNI-WQFLILRALLGLL-GGFVPNANALIATQVPRNKSGWALGTLST 149 (408)
T ss_pred HHHHHHHHHHHH---------------------hhH-HHHHHHHHHHHHh-hhhHHhHHHHHHHhcCHhhhhHHHHHHHH
Confidence 777766655442 122 2222222222222 23345556677889999999999999999
Q ss_pred HHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheee-eecc
Q 045073 319 AGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM-VPET 366 (402)
Q Consensus 319 ~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~et 366 (402)
...+|..++|.+.+.+.+.. +|+..+++.+++.++..+..++ +||.
T Consensus 150 ~~~~g~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 150 GGVSGALLGPLAGGLLADSY--GLRPVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999888766 8899998888877766655443 3554
No 150
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.37 E-value=1.3e-11 Score=113.09 Aligned_cols=177 Identities=19% Similarity=0.173 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhh-hhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHH
Q 045073 156 LGTTSTWFLLDIAFYTINLAQKD-IYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQL 234 (402)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~ 234 (402)
+..++..+......+....+.|. +.+++|+++.+.+. ......++..++.++.|+++||+|||+.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~ 71 (366)
T TIGR00886 4 FFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGN------------LVAVPVLAGAVLRIILGFLVDKFGPRYTTT 71 (366)
T ss_pred HHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhH------------hhHHHHHHHHHHHHHHHHHHHHhCchHHHH
Confidence 34455555555667777778885 66789999887665 777788888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhh
Q 045073 235 GGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHG 314 (402)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~ 314 (402)
.+.++..++.+++... ......+.+..+..+... +..+....+++|.+|++.|+++.+
T Consensus 72 ~~~~~~~i~~~~~~~~---------------------~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~r~~~~~ 129 (366)
T TIGR00886 72 LSLLLLAIPCLWAGLA---------------------VQSYSVLLLLRLFIGIAG-GSFASCMPWISFFFPKKIQGTALG 129 (366)
T ss_pred HHHHHHHHHHHHHHHH---------------------hhhHHHHHHHHHHHHHhc-hhhHhHHHHHHHhcCHhhhhHHHH
Confidence 9988888877766653 101222333333333322 233445678899999999999999
Q ss_pred HHHHHHHHhHHHHhHhHHhhhhcc--------CCcchhhH-HHHHHHHHHHhhhe-eeeecc
Q 045073 315 ISAAAGKAGAIVGAFGVQYYTQKG--------DKQIKQSI-ITLAVVNFLGFLCS-FMVPET 366 (402)
Q Consensus 315 ~~~~~~~~g~~i~~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~i~~i~~-~~~~et 366 (402)
+......+|..+++.+.+.+.... ..+|++.+ ...+++..+..++. .+.+|+
T Consensus 130 ~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (366)
T TIGR00886 130 LAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADT 191 (366)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccC
Confidence 999888888887777766554321 01678777 43344443333332 333443
No 151
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.36 E-value=3.7e-12 Score=117.11 Aligned_cols=157 Identities=14% Similarity=0.087 Sum_probs=112.7
Q ss_pred HHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 045073 168 AFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAIL 247 (402)
Q Consensus 168 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~ 247 (402)
..+....+.|.+.+++|.+..+.+. ......++..++.++.|+++||+|||+.+..+.++.+++.+..
T Consensus 18 ~~~~~~~~~~~~~~~~~~s~~~~g~------------~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~ 85 (377)
T TIGR00890 18 YVYTWTLLAPPLGRYFGVGVTAVAI------------WFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFY 85 (377)
T ss_pred HHhhhhhHHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHH
Confidence 3566777889999999999887665 7778888889999999999999999999999988888877666
Q ss_pred HHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHH
Q 045073 248 GARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVG 327 (402)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~ 327 (402)
... .+. ..+.+.....+.+.....+.......|.+| +.|+++.++......+|..++
T Consensus 86 ~~~---------------------~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~ 142 (377)
T TIGR00890 86 AIA---------------------DSL-AALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFIL 142 (377)
T ss_pred HHH---------------------HHH-HHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHH
Confidence 653 122 222222222222222222334445677777 569999999998888888776
Q ss_pred hHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee
Q 045073 328 AFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF 361 (402)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~ 361 (402)
+.+.+...+.. +|++.|.+.+++.++..+..+
T Consensus 143 ~~~~~~~~~~~--~~~~~f~~~~~~~~~~~~~~~ 174 (377)
T TIGR00890 143 SPLITSVINLE--GVPAAFIYMGIIFLLVIVLGA 174 (377)
T ss_pred HHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHH
Confidence 66666665554 899999988888777655544
No 152
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.36 E-value=2.6e-11 Score=115.44 Aligned_cols=189 Identities=17% Similarity=0.083 Sum_probs=120.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhh-hhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHH
Q 045073 154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAA-AMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFII 232 (402)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~ 232 (402)
.++...+.++....-+.......|.+-+++..+.... +. ...........++..+|.++.|+++||+|||++
T Consensus 17 ~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~ 89 (490)
T PRK10642 17 AITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQM-------IAALATFSVPFLIRPLGGLFFGMLGDKYGRQKI 89 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHH
Confidence 3444444555444444444455565555553322111 10 011112456667888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchH--HHHHHHHHHHHHHhhCCccccccccccccccchhh
Q 045073 233 QLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHA--WFMILYGLTLFFANFGPNSTTFIVPAELFPARLRS 310 (402)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 310 (402)
+..+.++.+++.++.++...+.. ...+ ..+++..+..+++..+..+...++++|.+|++.|+
T Consensus 90 l~~~~~l~~i~~~~~a~~~~~~~----------------~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg 153 (490)
T PRK10642 90 LAITIVIMSISTFCIGLIPSYAT----------------IGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRG 153 (490)
T ss_pred HHHHHHHHHHHHHHHHhcccHHH----------------HHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCc
Confidence 99999999888888776421000 0000 12344445555555666677888999999999999
Q ss_pred hhhhHHHHHHHHhHHHHhHhHHhhhh--------ccCCcchhhHHHHHHHHHHHhhheeeeeccC
Q 045073 311 TCHGISAAAGKAGAIVGAFGVQYYTQ--------KGDKQIKQSIITLAVVNFLGFLCSFMVPETN 367 (402)
Q Consensus 311 ~~~~~~~~~~~~g~~i~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~ 367 (402)
...++......+|..+++.+...+.. .. +|++.|++.+++.+++.++...+||+.
T Consensus 154 ~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~--gWR~~f~i~~~~~l~~~~~~~~~~esp 216 (490)
T PRK10642 154 FMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDW--GWRIPFFIALPLGIIGLYLRHALEETP 216 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCc--cHHHHHHHHHHHHHHHHHHHHcCCCCh
Confidence 99999887777777777755443321 23 899999987766665555544567763
No 153
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.36 E-value=6.7e-11 Score=112.49 Aligned_cols=131 Identities=11% Similarity=-0.013 Sum_probs=78.3
Q ss_pred hhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccc
Q 045073 218 WFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTF 297 (402)
Q Consensus 218 ~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (402)
.+.+++.+|++.++.+.+++++.+++++.+..........+ ..+.+ +.+......+.+.....|...
T Consensus 338 ~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~------------~vs~~-~~~~~~~l~~~ge~~~~p~g~ 404 (500)
T PRK09584 338 AIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAG------------IVSVN-WLIASYGLQSIGELMISGLGL 404 (500)
T ss_pred HHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCC------------ccCHH-HHHHHHHHHHHHHHHHhHHHH
Confidence 34466666766667788888888888877666433211110 01222 333333344444566667888
Q ss_pred cccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhh------ccC--CcchhhHHHHHHHHHHHhhhee
Q 045073 298 IVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQ------KGD--KQIKQSIITLAVVNFLGFLCSF 361 (402)
Q Consensus 298 ~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~------~~~--~~~~~~~~~~~~~~~i~~i~~~ 361 (402)
.++.+..|++.||+.+|+......+|..++..+...... ... .++...|...++..++..++.+
T Consensus 405 s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~ 476 (500)
T PRK09584 405 AMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLML 476 (500)
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999998876666666666555432210 000 0255677777766554444433
No 154
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.36 E-value=1.7e-11 Score=113.58 Aligned_cols=165 Identities=16% Similarity=0.165 Sum_probs=117.4
Q ss_pred HHHHHHHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHH
Q 045073 164 LLDIAFYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSI 242 (402)
Q Consensus 164 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~ 242 (402)
....+.+....+.+.++ ++.|++....+. ......+...+..++.|+++||+|||+.+..+..+.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl------------~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~ 88 (400)
T PRK11646 21 LVVLGFFVVFPLISIRFVDQLGWAAVMVGI------------ALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAA 88 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcHHHHHH------------HHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHH
Confidence 33344455555666554 568998887665 55666667777778999999999999999999888888
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHH
Q 045073 243 CMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKA 322 (402)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 322 (402)
+.+.+... .+. +.+.+.....+.......+...+++.|.+|++.|+++.|+......+
T Consensus 89 ~~~~~~~~---------------------~~~-~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 146 (400)
T PRK11646 89 GFATMAIA---------------------HEP-WLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSA 146 (400)
T ss_pred HHHHHHHh---------------------ccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 77766542 222 22333333333333334455667789999999999999999999999
Q ss_pred hHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeec
Q 045073 323 GAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPE 365 (402)
Q Consensus 323 g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~e 365 (402)
|..++|.+.+.+.+ . +|+..|++.+++.++..++.. +.||
T Consensus 147 g~~ig~~l~g~l~~-~--g~~~~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 147 GAVIGALLGSWLLQ-Y--DFRLVCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHHHHHH-h--hHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999998884 4 899999888777666554433 3455
No 155
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.35 E-value=1.2e-11 Score=116.53 Aligned_cols=158 Identities=16% Similarity=0.113 Sum_probs=111.1
Q ss_pred HHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 045073 170 YTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGA 249 (402)
Q Consensus 170 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~ 249 (402)
+....+.|.+.+++|.+..+.+. ......++..++.++.|+++||+|||+.++.+.++.+++.++.+.
T Consensus 36 ~~~~~~~~~i~~~~g~s~~~~~~------------~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 103 (455)
T TIGR00892 36 KAVTVFFKELQQIFQATYSETAW------------ISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASF 103 (455)
T ss_pred cchhhhHHHHHHHhCcchhHHHH------------HHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHH
Confidence 44566778888899998887655 445555566677788999999999999999888777776666554
Q ss_pred HhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhH
Q 045073 250 RYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAF 329 (402)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~ 329 (402)
. .+.+.......+..+.+.....+....++.+.+| +.|+++.|+.+....+|..++|.
T Consensus 104 ~---------------------~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~ 161 (455)
T TIGR00892 104 S---------------------SNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAP 161 (455)
T ss_pred h---------------------hhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHH
Confidence 3 1112222222222222222222344556678886 78999999999999999999999
Q ss_pred hHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073 330 GVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 363 (402)
+.+.+.+.. +|+++|++.+++.++..+..+++
T Consensus 162 l~~~l~~~~--gwr~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 162 LNQYLFESF--GWRGSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred HHHHHHHHh--ChHHHHHHHHHHHHHHHHHHHHh
Confidence 999888877 89999999888777665544433
No 156
>PRK11043 putative transporter; Provisional
Probab=99.35 E-value=2.4e-11 Score=112.92 Aligned_cols=155 Identities=14% Similarity=0.048 Sum_probs=111.2
Q ss_pred hhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcc
Q 045073 175 AQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSL 254 (402)
Q Consensus 175 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~ 254 (402)
..|.+.+++|.++.+.+. ......++..++.++.|+++||+|||+.+..+..+..++.+.....
T Consensus 28 ~~~~i~~~~~~s~~~~g~------------~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~---- 91 (401)
T PRK11043 28 AFKAIQADLQTSASAVSA------------SLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWV---- 91 (401)
T ss_pred hHHHHHHHHCCCHHHHHH------------HHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHh----
Confidence 345556788988887665 6777788888999999999999999999998887777666555442
Q ss_pred cCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhh
Q 045073 255 RGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYY 334 (402)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~ 334 (402)
.+.+.+ .+.....+.+.....+...++..|.+|++.++...+..+....++..++|.+.+.+
T Consensus 92 -----------------~~~~~l-~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l 153 (401)
T PRK11043 92 -----------------ESAAQL-LVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWL 153 (401)
T ss_pred -----------------cCHHHH-HHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222 22222222222222233456678999999899888888888889999999999998
Q ss_pred hhccCCcchhhHHHHHHHHHHHhhheeeeec
Q 045073 335 TQKGDKQIKQSIITLAVVNFLGFLCSFMVPE 365 (402)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~e 365 (402)
.+.. +|+..|++.+++.++..+..++++|
T Consensus 154 ~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~ 182 (401)
T PRK11043 154 LNHF--GWQAIFATLFAITLLLILPTLRLKP 182 (401)
T ss_pred HhcC--ChHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8877 8999998888777776665555544
No 157
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.35 E-value=1.7e-11 Score=113.28 Aligned_cols=154 Identities=10% Similarity=0.051 Sum_probs=110.0
Q ss_pred hhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhc
Q 045073 174 LAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDS 253 (402)
Q Consensus 174 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~ 253 (402)
...+.+..+.+.+....+. ......+...+..++.|+++||+|||++++.+..+.+++.+.+...
T Consensus 24 ~~~~~~~~~~~~s~~~~~~------------~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~--- 88 (393)
T PRK11195 24 FAAIALLKELHYPDWSQPL------------LQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFG--- 88 (393)
T ss_pred HHHHHHHHHcCCcHHHHHH------------HHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHH---
Confidence 3344456677777665444 5666777788888899999999999999999988877766554432
Q ss_pred ccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHh
Q 045073 254 LRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQY 333 (402)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~ 333 (402)
.+. .+..+..+.+.....|...+++.|++|++.|+++.|+......++.++||.+.+.
T Consensus 89 ------------------~~~----~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~ 146 (393)
T PRK11195 89 ------------------IHP----LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGA 146 (393)
T ss_pred ------------------HHH----HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 1222333444455667888899999999999999999999999999999999999
Q ss_pred hhhccCCcchhhHHHHHHHHHHHhhheeeeeccC
Q 045073 334 YTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETN 367 (402)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~ 367 (402)
+.+. .+...+.+.+.+.+++.+....+||.+
T Consensus 147 l~~~---~~~~~~~i~~~~~~~~~~~~~~l~~~~ 177 (393)
T PRK11195 147 LADP---HAEAALAVCALIYLLAALFNLFIPRLG 177 (393)
T ss_pred HHHH---HHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 9875 455566655555454544444567654
No 158
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.35 E-value=4.2e-11 Score=108.05 Aligned_cols=182 Identities=15% Similarity=0.096 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073 154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ 233 (402)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~ 233 (402)
.++...+........++......+.|+..+.-+...... .-+...+...+..++...+..++.+|+|.|+.+
T Consensus 221 ~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~--------~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~L 292 (412)
T PF01306_consen 221 NFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQ--------MYGYLWSVQVFLEALMMFFSPWLINRIGAKNLL 292 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChh--------HHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHH
Confidence 344444444444344555544445555443222211111 233367777888888888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073 234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH 313 (402)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 313 (402)
+++..++.+=.+..++. .+. +.+.+.-..-+.-........+-|+++.+|++..++..
T Consensus 293 llag~i~~iRi~~~~~~---------------------~~~-~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y 350 (412)
T PF01306_consen 293 LLAGVIMAIRIIGSGFA---------------------TNP-WVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLY 350 (412)
T ss_dssp HHHHHHHHHHHHHHHT-----------------------SH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHH
T ss_pred HHHHHHHHHHHHHHhhh---------------------cch-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHH
Confidence 99887777766665553 222 33333333333222122234566889999999999998
Q ss_pred hHH-HHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee-eccC
Q 045073 314 GIS-AAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV-PETN 367 (402)
Q Consensus 314 ~~~-~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~et~ 367 (402)
.+. +....++.++.+.+.|.+.|+. |++.+|++.+.+.++..++..+. ++.+
T Consensus 351 ~v~~~~~~~~~~~i~s~~~G~lyd~~--G~~~tylimg~iv~~~~li~~f~l~~~~ 404 (412)
T PF01306_consen 351 LVGFQFAKQIGIIILSPLAGYLYDRI--GFQHTYLIMGLIVLPFTLISAFTLKKDK 404 (412)
T ss_dssp HHHHTTTHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHS--SS
T ss_pred HHHHHHHHHHHHHHHhhhHHhhHhhc--CcHHHHHHHHHHHHHHHHHheeeecCCC
Confidence 885 5677789999999999999998 88889988888877766666654 4433
No 159
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.34 E-value=5e-11 Score=113.35 Aligned_cols=170 Identities=10% Similarity=0.028 Sum_probs=115.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhc-cchhH
Q 045073 154 HLLGTTSTWFLLDIAFYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDR-IGRFI 231 (402)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~grr~ 231 (402)
.++..++..+.....+|+...+++.++ +++|++..+... .............+++|+++|| +|||+
T Consensus 22 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~------------~~~~~~~~~~~~~~~~G~LaDr~~G~r~ 89 (500)
T PRK09584 22 AFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSIT------------LFSSFSALVYGLVAIGGWLGDKVLGTKR 89 (500)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHhccchHH
Confidence 456666677777788888888898888 568888776433 2222222223333578999999 59999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccch--h
Q 045073 232 IQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARL--R 309 (402)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~--r 309 (402)
.+..+.++.+++..++.+. .+....+.+.....+.+.....+...++..|.+|++. |
T Consensus 90 ~~~~g~~~~~ig~~l~~~~---------------------~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~ 148 (500)
T PRK09584 90 VIMLGAIVLAIGYALVAWS---------------------GHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRL 148 (500)
T ss_pred HHHHHHHHHHHHHHHHHHh---------------------cccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhh
Confidence 9999988888776665542 1111222222222233333344556678899998643 4
Q ss_pred hhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhh
Q 045073 310 STCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFL 358 (402)
Q Consensus 310 ~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i 358 (402)
+.+.++.+...++|.+++|.+.+++.+.. +|+..|.+.++..+++.+
T Consensus 149 ~~~~~~~~~~~~iG~~~gp~i~g~l~~~~--g~~~~F~i~~i~~~i~~i 195 (500)
T PRK09584 149 DGAFTMYYMSINIGSFFSMLATPWLAAKY--GWSVAFALSVVGMLITVV 195 (500)
T ss_pred hhcchHHHHHHHHHHHHHHHHHHHHHHhh--CHHHHHHHHHHHHHHHHH
Confidence 56788889999999999999999998877 899999887765555443
No 160
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.34 E-value=1.2e-11 Score=115.43 Aligned_cols=172 Identities=12% Similarity=-0.037 Sum_probs=118.5
Q ss_pred HHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHH
Q 045073 165 LDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICM 244 (402)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~ 244 (402)
............|.+.++.+.++.+.+. ......++.+++.++.|+++||+|||+++..+..+.+++.
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~------------~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~ 96 (417)
T PRK10489 29 SIFGLGLLGVAVPVQIQMMTGSTLQVGL------------SVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGF 96 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHH------------HHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHH
Confidence 3334445555678887777777766555 7777888888999999999999999999888777666665
Q ss_pred HHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhH
Q 045073 245 AILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGA 324 (402)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~ 324 (402)
+.+...... . .+......+..+..+.+.....+...++..|..|++.|+++.++......+|.
T Consensus 97 ~~~~~~~~~-~----------------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 159 (417)
T PRK10489 97 IGLALNAFL-P----------------EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGS 159 (417)
T ss_pred HHHHHHHHc-C----------------CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHH
Confidence 554432111 0 11122222222222222222234456678899999999999999999999999
Q ss_pred HHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccC
Q 045073 325 IVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETN 367 (402)
Q Consensus 325 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~ 367 (402)
.+||.+.+.+.+.. +|++.+.+.++..++..++.+.+|+++
T Consensus 160 ~~g~~l~g~l~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~ 200 (417)
T PRK10489 160 VISPALGGLLIAAG--GVAWNYGLAAAGTFITLLPLLRLPALP 200 (417)
T ss_pred HhHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999999888766 788888887777776666655666653
No 161
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.34 E-value=1.4e-11 Score=111.99 Aligned_cols=166 Identities=19% Similarity=0.238 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073 160 STWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL 239 (402)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~ 239 (402)
...+......+......|.+.++.|.+..+.+. ......++..++.++.|+++||+|||+.+..+..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~ 73 (352)
T cd06174 6 LGFFLSGLDRGLLSPALPLLAEDLGLSASQAGL------------IVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLL 73 (352)
T ss_pred HHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHH
Confidence 334445556666777778888888888776555 67777888889999999999999999999999888
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073 240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA 319 (402)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 319 (402)
..++.+..... .+ .....+.....+.......+...++..|.+|++.|+++.++....
T Consensus 74 ~~~~~~~~~~~---------------------~~-~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (352)
T cd06174 74 FALGSLLLAFA---------------------SS-LWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAG 131 (352)
T ss_pred HHHHHHHHHHh---------------------cc-HHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHH
Confidence 88877766653 11 233333334444434445567778899999999999999999999
Q ss_pred HHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee
Q 045073 320 GKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF 361 (402)
Q Consensus 320 ~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~ 361 (402)
..+|..+++.+.+.+.+.. +|+..+.+.+++.++..+...
T Consensus 132 ~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 171 (352)
T cd06174 132 FGLGALLGPLLGGLLAESL--GWRWLFLILAILGLLLALLLL 171 (352)
T ss_pred HHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998876 788888887777666655443
No 162
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.34 E-value=8.7e-11 Score=107.73 Aligned_cols=167 Identities=11% Similarity=0.113 Sum_probs=107.2
Q ss_pred HHHHHHhhhhhhhhhcC-cchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHH
Q 045073 168 AFYTINLAQKDIYPATG-IVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAI 246 (402)
Q Consensus 168 ~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 246 (402)
..-....|.+.++++.| .+....+. ...+..++.++.-...+++..|+|.|+++.++.+..++=..+
T Consensus 222 ~~~~~~~f~~~yl~~~gg~~~~~~g~------------~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l 289 (400)
T PF03825_consen 222 SHAAYYTFFSIYLQELGGYSGSTIGI------------LWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLL 289 (400)
T ss_pred HHHHHHHHHHHHHHHcccchhhHHHH------------HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 33344456677888887 55554332 556777888888889999999999999999988777666665
Q ss_pred HHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHH---HHHHHHhhCCccccccccccccccchhhhhhhHHHHH-HHH
Q 045073 247 LGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYG---LTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA-GKA 322 (402)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~-~~~ 322 (402)
.+... .+.+....+.. ..-+............++.+..|++.|+++.++.... ..+
T Consensus 290 ~a~~~--------------------~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Gl 349 (400)
T PF03825_consen 290 YAYFS--------------------DPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGL 349 (400)
T ss_pred HHHhc--------------------CCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhH
Confidence 55531 11111111111 1122211222335667889999999999999998876 458
Q ss_pred hHHHHhHhHHhhhhccCC----cchhhHHHHHHHHHHHhhheee-eecc
Q 045073 323 GAIVGAFGVQYYTQKGDK----QIKQSIITLAVVNFLGFLCSFM-VPET 366 (402)
Q Consensus 323 g~~i~~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~~i~~~~-~~et 366 (402)
|..+|.++.|++.+..+. .+...+.+.+++.++..++.++ .+|+
T Consensus 350 g~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 350 GGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 999999999999998732 2234455555555555444443 3443
No 163
>PRK09848 glucuronide transporter; Provisional
Probab=99.33 E-value=1.9e-10 Score=108.50 Aligned_cols=149 Identities=10% Similarity=-0.041 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHH
Q 045073 158 TTSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGG 236 (402)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~ 236 (402)
.....+.....++......|.++++ +|.++.... .......++.+++.++.+++.||+|+|+.+..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~------------~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g 300 (448)
T PRK09848 233 LCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTV------------LVLVQNLVGTVASAPLVPGMVARIGKKNTFLIG 300 (448)
T ss_pred HHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 3333333334444444556666654 554433211 133334556777888999999999999999988
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccc-------hh
Q 045073 237 FLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPAR-------LR 309 (402)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~-------~r 309 (402)
.++..++.+.+.+. . ....+.........+.+.....+..+++.+|..|.+ .+
T Consensus 301 ~~~~~i~~~~~~~~----~----------------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~ 360 (448)
T PRK09848 301 ALLGTCGYLLFFWV----S----------------VWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIE 360 (448)
T ss_pred HHHHHHHHHHHHHc----C----------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccch
Confidence 87776665554431 0 111222222222222233334455667777777643 45
Q ss_pred hhhhhHHHHHHHHhHHHHhHhHHhhhhcc
Q 045073 310 STCHGISAAAGKAGAIVGAFGVQYYTQKG 338 (402)
Q Consensus 310 ~~~~~~~~~~~~~g~~i~~~~~~~~~~~~ 338 (402)
|...|+.+....+|..+++.+.+.+.+..
T Consensus 361 G~~~~~~~~~~klg~aig~~i~g~~l~~~ 389 (448)
T PRK09848 361 GLTYSLFSFTRKCGQAIGGSIPAFILGLS 389 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 88899999999999999998888876654
No 164
>PRK15075 citrate-proton symporter; Provisional
Probab=99.33 E-value=4.8e-11 Score=112.00 Aligned_cols=177 Identities=14% Similarity=0.036 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073 154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ 233 (402)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~ 233 (402)
.....++.++.............|.+.++++.++.+.+. ...+........+...++.++.|++.||+|||+.+
T Consensus 16 ~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l 89 (434)
T PRK15075 16 AILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFAS------LMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGL 89 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHH------HHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHH
Confidence 455555666666667777778889888888877665321 00111122233444467888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073 234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH 313 (402)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 313 (402)
+.+..+.+++.++.++........ ......+++..+..+.+.....+....+++|.+|++.|+++.
T Consensus 90 ~~~~~~~~~~~~l~~~~~~~~~~~--------------~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~ 155 (434)
T PRK15075 90 IVTLSIMASGTLLIAFVPGYATIG--------------LAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYT 155 (434)
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHH--------------HHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHH
Confidence 999888888777766531100000 000011233333334333334455667899999999999999
Q ss_pred hHHHHHHHHhHHHHhHhHHhhh--------hccCCcchhhHHHHHHH
Q 045073 314 GISAAAGKAGAIVGAFGVQYYT--------QKGDKQIKQSIITLAVV 352 (402)
Q Consensus 314 ~~~~~~~~~g~~i~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 352 (402)
++.....+++..+++.+.+.+. +.. +|+.+|++.++.
T Consensus 156 ~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~--gWr~~f~~~~~~ 200 (434)
T PRK15075 156 SWQSASQQVAVVFAALLGYLLNQWLSPAQMAEW--GWRIPFLIGCLI 200 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhcc--chHHHHHHHHHH
Confidence 9998888888777776655542 233 899888875443
No 165
>TIGR00898 2A0119 cation transport protein.
Probab=99.32 E-value=4.4e-12 Score=121.52 Aligned_cols=155 Identities=15% Similarity=0.190 Sum_probs=116.9
Q ss_pred hhhhhhhhhcCcc---hhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 045073 174 LAQKDIYPATGIV---RKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGAR 250 (402)
Q Consensus 174 ~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~ 250 (402)
.+.|.+.++++++ +.+.+. ......++.+++.++.|+++||+|||+++..+.++.+++.++.++.
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~------------~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~ 177 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDL------------TQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFS 177 (505)
T ss_pred cccccEEEEecceechHHHHHH------------HHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHc
Confidence 3556777778887 554443 7778888999999999999999999999999888877777666542
Q ss_pred hhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHh
Q 045073 251 YDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFG 330 (402)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~ 330 (402)
. ....+.+...+.+++..+..+...+++.|.+|++.|+.+.++......+|.++++.+
T Consensus 178 ---------------------~-~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 235 (505)
T TIGR00898 178 ---------------------P-NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLV 235 (505)
T ss_pred ---------------------c-cHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 2 223344444444554555567788899999999999999999988888888888876
Q ss_pred HHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccC
Q 045073 331 VQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETN 367 (402)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~ 367 (402)
...+. +|++.+++.++..++..+..+++||+.
T Consensus 236 ~~~~~-----~wr~~~~~~~i~~~~~~~~~~~~~esp 267 (505)
T TIGR00898 236 AYFIP-----DWRWLQLAVSLPTFLFFLLSWFVPESP 267 (505)
T ss_pred HHHhh-----HHHHHHHHHHHHHHHHHHHHHhcCCCh
Confidence 65443 588888888888777776666678864
No 166
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.32 E-value=5.4e-11 Score=109.85 Aligned_cols=180 Identities=11% Similarity=0.036 Sum_probs=115.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHH
Q 045073 154 HLLGTTSTWFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFII 232 (402)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~ 232 (402)
.++...+..+......+......+.+.+ ++|++..+.+. ...+..+...++.+..|++.||+|.|++
T Consensus 35 ~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~------------l~ai~~l~~al~rip~G~l~Dr~G~R~v 102 (462)
T PRK15034 35 NLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFL------------LTALPSVSGALLRVPYSFMVPIFGGRRW 102 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCChHH
Confidence 4455554444444455555555556555 68999887665 5555666666777888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhh
Q 045073 233 QLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTC 312 (402)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~ 312 (402)
+.++.++.++..+..++.... . .++...+.+...+.+.. .+..+.....+++.+|++.||++
T Consensus 103 ~~~~~ll~~i~~~~~~~a~~~---~--------------~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A 164 (462)
T PRK15034 103 TVFSTAILIIPCVWLGIAVQN---P--------------NTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSA 164 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHcc---c--------------CCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHH
Confidence 999988887777766653110 0 12233333333333333 33455677788999999999999
Q ss_pred hhHHHHHHHHhHHHHhHhHHhhh-----hccC-----------CcchhhHHHHHHHHHHHhhheeee
Q 045073 313 HGISAAAGKAGAIVGAFGVQYYT-----QKGD-----------KQIKQSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 313 ~~~~~~~~~~g~~i~~~~~~~~~-----~~~~-----------~~~~~~~~~~~~~~~i~~i~~~~~ 363 (402)
.|+....+++|..+++++.+.+. ...+ .+++.+.++..++.++..++.++.
T Consensus 165 ~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 165 LGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99998777788777666554433 1110 035666666667666666555544
No 167
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.32 E-value=6.6e-11 Score=109.77 Aligned_cols=175 Identities=11% Similarity=-0.039 Sum_probs=122.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHH
Q 045073 155 LLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQL 234 (402)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~ 234 (402)
++.++..++.............|.+.+++|.+..+.+. ......++.+++++..|++.||+|||+.+.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~------------l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~ 72 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAAL------------VQSAFYGGYFIMAIPAAIFMKKLSYKAGIL 72 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCchHHHH
Confidence 34455555555555555567778888889999887665 778888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhh
Q 045073 235 GGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHG 314 (402)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~ 314 (402)
.+..+.+++.++...... ..+........+..+.+.....+....+..+..|++.|++..+
T Consensus 73 ~g~~l~~~g~~l~~~~~~-------------------~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 133 (410)
T TIGR00885 73 LGLFLYALGAFLFWPAAE-------------------IMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLN 133 (410)
T ss_pred HHHHHHHHHHHHHHHHHh-------------------hccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHH
Confidence 999888887766543211 1122223333333333223333445566778889999999999
Q ss_pred HHHHHHHHhHHHHhHhHHhhhhccC------------------------CcchhhHHHHHHHHHHHhhhe
Q 045073 315 ISAAAGKAGAIVGAFGVQYYTQKGD------------------------KQIKQSIITLAVVNFLGFLCS 360 (402)
Q Consensus 315 ~~~~~~~~g~~i~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~i~~i~~ 360 (402)
+.+.+..+|..++|.+.+.+..... .+|+.+|.+.+++.++..++.
T Consensus 134 ~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 134 LAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988776643210 048888888887666554443
No 168
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.32 E-value=5e-11 Score=110.73 Aligned_cols=160 Identities=12% Similarity=-0.036 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHH
Q 045073 157 GTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGG 236 (402)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~ 236 (402)
...+..+......+....+.+.+.+++|.+..+.+. ......++..++.++.|++.||+|||+.+..+
T Consensus 17 ~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~------------~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~ 84 (402)
T TIGR00897 17 WGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSAS------------AFTLYGIAAAISAWISGVVAEIIGPLKTMMIG 84 (402)
T ss_pred HHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHH------------HHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHH
Confidence 333333444444444555667778889998887665 77788888899999999999999999999998
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHH
Q 045073 237 FLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGIS 316 (402)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~ 316 (402)
..+.+++.++...... . ...+....+.....+.+.....+....+..+.+|+++|+++.|+.
T Consensus 85 ~~~~~~~~~~~~~~~~--~----------------~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 146 (402)
T TIGR00897 85 LLLWCVGHAAFIVFGL--G----------------HANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWF 146 (402)
T ss_pred HHHHHHHHHHHHHHhc--c----------------CccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHH
Confidence 8877776554322111 0 111222222222222222222233445667889999999999999
Q ss_pred HHHHHHhH-HHHhHhHHhhhhccCCcchhhHHH
Q 045073 317 AAAGKAGA-IVGAFGVQYYTQKGDKQIKQSIIT 348 (402)
Q Consensus 317 ~~~~~~g~-~i~~~~~~~~~~~~~~~~~~~~~~ 348 (402)
+....+|. .++|.+.+.+.+.. ++...++.
T Consensus 147 ~~~~~~g~~~~g~~~~~~l~~~~--g~~~~~~~ 177 (402)
T TIGR00897 147 WAVYSIGIGVFGSYYSSYAIPAF--GEMNTLWS 177 (402)
T ss_pred HHHHHHHHHHHHHHHHHhccccc--chHHHHHH
Confidence 99999886 57888888777665 55444443
No 169
>PRK09952 shikimate transporter; Provisional
Probab=99.31 E-value=1.1e-10 Score=109.58 Aligned_cols=145 Identities=13% Similarity=0.024 Sum_probs=97.6
Q ss_pred HHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHH
Q 045073 207 LVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLF 286 (402)
Q Consensus 207 ~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (402)
....++..+|.++.|+++||+|||+.+..+..+.+++.++.++........ ......+.+.....+
T Consensus 71 ~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~l~~~R~l~G 136 (438)
T PRK09952 71 GVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIG--------------WWAPVLLVTLRAIQG 136 (438)
T ss_pred HHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHH--------------HHHHHHHHHHHHHHH
Confidence 345567788889999999999999999999888888877776642100000 000112333444455
Q ss_pred HHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhh--------ccCCcchhhHHHHHHHHHHHhh
Q 045073 287 FANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQ--------KGDKQIKQSIITLAVVNFLGFL 358 (402)
Q Consensus 287 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~i~~i 358 (402)
.+..+..+....++.|.+|++.|+...+.......+|..+++.+...+.. .. +|+.+|++.++..++...
T Consensus 137 ~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~--gWr~~f~~~~~~~l~~~~ 214 (438)
T PRK09952 137 FAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSW--GWRIPFLFSIVLVLIALW 214 (438)
T ss_pred hhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhcc--ChHHHHHHHHHHHHHHHH
Confidence 54555556667889999999999999998888888888877765554432 23 899999887776655433
Q ss_pred heeeeeccC
Q 045073 359 CSFMVPETN 367 (402)
Q Consensus 359 ~~~~~~et~ 367 (402)
+....||++
T Consensus 215 l~~~~~es~ 223 (438)
T PRK09952 215 VRNGMEESA 223 (438)
T ss_pred HHHhCCCCh
Confidence 322345653
No 170
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.31 E-value=9.4e-10 Score=104.89 Aligned_cols=307 Identities=11% Similarity=0.117 Sum_probs=172.1
Q ss_pred CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCC--chhHHHHHHh
Q 045073 2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGD--YLWRIVLMFG 79 (402)
Q Consensus 2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Wr~~f~~~ 79 (402)
++.+.+|+-|...+++-..++++......+|.++|.++|.++.....+...++ +..+- .+.. ..|..-|+++
T Consensus 255 ~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~-----~~it~-~DPrWIGAWWlGFLi~ 328 (735)
T KOG3626|consen 255 FTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSP-----IGITP-TDPRWIGAWWLGFLIC 328 (735)
T ss_pred ccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCC-----CCCCC-CCcchhhHHHHHHHHH
Confidence 57788999999999999999999999999999999999999986554321110 00000 1122 2576777776
Q ss_pred HHHHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhh-hhhHHHHHH
Q 045073 80 AVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQ-KHGLHLLGT 158 (402)
Q Consensus 80 ~i~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 158 (402)
+...++..+.++++|....- ..++...++. +..++.++..+.........+.|-+..+| -..+.++..
T Consensus 329 g~~~~~~a~p~f~fPk~lp~-----~~~~~~~~~~------~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~ 397 (735)
T KOG3626|consen 329 GALLLFSAVPLFFFPKELPK-----SQKRKRARDL------HVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLV 397 (735)
T ss_pred HHHHHHHHHHHHhCcccCcc-----ccccchhhhh------cccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHH
Confidence 66666666666777765321 1100000000 00000000000000000011111111111 112356677
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccc--hhHHHHH
Q 045073 159 TSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIG--RFIIQLG 235 (402)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g--rr~~~~~ 235 (402)
.+........+.+...|+|.|++. +|.+...+.. +...+...+..+|.+++|+++.|+. .|....+
T Consensus 398 ~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~-----------l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~ 466 (735)
T KOG3626|consen 398 VLASVIESLAITGYITFLPKYLETQFGISASLANI-----------LTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKF 466 (735)
T ss_pred HHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHH-----------HhhhhhhhhhhhhhhccceeeeeecccHHHHHHH
Confidence 777777788888999999999975 8888887554 2344555566778889999999874 3444444
Q ss_pred HHHHHHHHHHHHH---HHhhc-----------c----cCC------------CCC-------------------------
Q 045073 236 GFLLMSICMAILG---ARYDS-----------L----RGK------------KCD------------------------- 260 (402)
Q Consensus 236 ~~~~~~~~~~~~~---~~~~~-----------~----~~~------------~~~------------------------- 260 (402)
.++...++.+... +.... . ... +|+
T Consensus 467 ~~~~~~l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~ 546 (735)
T KOG3626|consen 467 VIVCSVLSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTE 546 (735)
T ss_pred HHHHHHHHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcc
Confidence 4333333333211 11100 0 000 000
Q ss_pred ----------------------CCCCCCccccCCc----hHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhh
Q 045073 261 ----------------------PKKDPLHEYCDGN----HAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHG 314 (402)
Q Consensus 261 ----------------------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~ 314 (402)
.......+.|+.+ ...+++++.+..+....+.. ..+.++-...|++.|+.++|
T Consensus 547 ~~~~~~~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~-p~~~i~LR~V~~e~ks~AlG 625 (735)
T KOG3626|consen 547 SSGTSDGNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAV-PGMLIVLRCVPPEEKSFALG 625 (735)
T ss_pred cccCCCCceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccC-cceEEEEEccCchhchhhhH
Confidence 0011112334433 22333333333333334433 34556677889999999999
Q ss_pred HHHHHHHH-hHHHHhHhHHhhhhc
Q 045073 315 ISAAAGKA-GAIVGAFGVQYYTQK 337 (402)
Q Consensus 315 ~~~~~~~~-g~~i~~~~~~~~~~~ 337 (402)
+..++.++ |.+-+|.++|++.|.
T Consensus 626 ~~~~~irllg~IPsPIifG~~ID~ 649 (735)
T KOG3626|consen 626 FQWMLIRLLGFIPSPIIFGAVIDT 649 (735)
T ss_pred HHHHHHHHHhcCCchHhhhhhHhh
Confidence 99888775 677899999999875
No 171
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.31 E-value=7.8e-11 Score=98.21 Aligned_cols=172 Identities=10% Similarity=0.052 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073 155 LLGTTSTWFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ 233 (402)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~ 233 (402)
++.+....+......+-+....|.+++ .+|+|+..++. +.+.....+.+.+.+.|.++||+|++...
T Consensus 266 fw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~------------i~s~vy~Isav~spvfg~i~Dk~G~n~~w 333 (459)
T KOG4686|consen 266 FWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGN------------ILSTVYGISAVLSPVFGAISDKYGFNLWW 333 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccc------------hhhhhhhhhhhhhhhHHHhHhhhcceehh
Confidence 444444444444555555556677775 49999887554 44444555666777899999999999776
Q ss_pred HHHHHHHHH-HHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhh
Q 045073 234 LGGFLLMSI-CMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTC 312 (402)
Q Consensus 234 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~ 312 (402)
+.+..+..+ +-..+.+.. -+.+.-+.++++....... ..|..++-+.|.+.-|++
T Consensus 334 v~~a~~~tl~~H~~l~Ft~--------------------lsPy~~m~~lGLsysllAc----slWP~va~~vpE~qLGTa 389 (459)
T KOG4686|consen 334 VASACILTLLGHSGLFFTF--------------------LSPYTSMTFLGLSYSLLAC----SLWPCVASLVPEEQLGTA 389 (459)
T ss_pred HHHHHHHHHHHhhhHHhhh--------------------ccHHHHHHHHhhhHHHHHH----HHhhhhhhhCCHHHhcch
Confidence 655433222 222222221 1222333333333222222 355566788899999999
Q ss_pred hhHHHHHHHHhHHHHhHhHHhhhhccCCcch---hhHHHHHHHHHHHhhheeee
Q 045073 313 HGISAAAGKAGAIVGAFGVQYYTQKGDKQIK---QSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 313 ~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~i~~~~~ 363 (402)
.|+.+.+.++|-.+.|.+.+.+.+..+ ++. ..|.+...+++++..+.+.+
T Consensus 390 ygf~qsIqNLgla~i~Iiag~i~d~~g-~y~~le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 390 YGFIQSIQNLGLAFIPIIAGFIADGDG-SYDNLEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred HHHHHHHHhhhhhHHhhhhheeecCCC-chhhHHHHHHHHHHHHHHHHHHHhhe
Confidence 999999999999999999999988764 232 33444445555565555555
No 172
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.31 E-value=6.5e-11 Score=104.70 Aligned_cols=175 Identities=15% Similarity=0.109 Sum_probs=129.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073 154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ 233 (402)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~ 233 (402)
.++.............+......+.+-+++++|+.+..+ +..+..+...+..+..|++.||+|.|+..
T Consensus 15 ~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~l------------l~aiPil~GallRl~~g~l~drfGgR~~~ 82 (417)
T COG2223 15 NLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGL------------LVAIPILVGALLRLPYGFLTDRFGGRKWT 82 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHH------------HHHHHHHHhHHHHHHHHhhhcccCchHHH
Confidence 444444444444444555555556666789999998666 77777888888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073 234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH 313 (402)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 313 (402)
..+.++..+-.+.+++... ....+..+.+.++.+. ..+..++...++++.||++.+|.+.
T Consensus 83 ~~s~~l~~IP~~~~~~a~~-------------------~~~~~~ll~~gll~G~-~GasFav~m~~~s~~fP~~~qG~Al 142 (417)
T COG2223 83 ILSMLLLLIPCLGLAFAVT-------------------YPSTWQLLVIGLLLGL-AGASFAVGMPNASFFFPKEKQGLAL 142 (417)
T ss_pred HHHHHHHHHHHHHHHHHcc-------------------CCchHHHHHHHHHHhc-ccceehcccccccccCChhhhhHHH
Confidence 9998888877777776543 1212333333333333 3455667788899999999999999
Q ss_pred hHHHHHHHHhHHHHhHhHHhhhhccCCc---chhhHHHHHHHHHHHhhheeee
Q 045073 314 GISAAAGKAGAIVGAFGVQYYTQKGDKQ---IKQSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 314 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~i~~~~~ 363 (402)
|+.. .+++|..+..++.+.+.... + |+.+..+..+..++..+..++.
T Consensus 143 GI~g-~GN~G~av~q~~~P~v~~~~--g~~~w~~~~~i~~~~l~v~~v~~~~~ 192 (417)
T COG2223 143 GIAG-AGNLGVAVAQLVAPLVAVAF--GFLAWRNVAGIYVVALAIAAVLAWLG 192 (417)
T ss_pred HHhc-cccccHHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999 99999999999999888877 6 7888888777777777666643
No 173
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.29 E-value=8.9e-11 Score=108.62 Aligned_cols=154 Identities=12% Similarity=0.031 Sum_probs=114.3
Q ss_pred HHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 045073 168 AFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAIL 247 (402)
Q Consensus 168 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~ 247 (402)
..+......|.+.+++|++..+.+. ......++..++.++.|+++||+|||+++..+..+.+++.+..
T Consensus 24 ~~~~~~~~lp~i~~~~~~s~~~~g~------------~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~ 91 (393)
T PRK09705 24 LLTSVGPLLPQLRQASGMSFSVAAL------------LTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMR 91 (393)
T ss_pred hhhccchhHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 3355667789999999999887666 6777778888889999999999999999999999999988887
Q ss_pred HHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHH
Q 045073 248 GARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVG 327 (402)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~ 327 (402)
++. ++. ..+.+..+..+.+.....+....++.+.+| +.|+.+.++.......|..++
T Consensus 92 ~~a---------------------~~~-~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g 148 (393)
T PRK09705 92 ELY---------------------PQS-ALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLG 148 (393)
T ss_pred HHC---------------------cch-HHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHH
Confidence 763 222 233333444443333344455667788887 779999999998888899999
Q ss_pred hHhHHhhhhccCCcchhhHHHHHHHHHHHh
Q 045073 328 AFGVQYYTQKGDKQIKQSIITLAVVNFLGF 357 (402)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 357 (402)
+.+.+.+.+... +|+..+.+.++..++..
T Consensus 149 ~~~~~~l~~~~~-~w~~~~~~~~~~~~~~~ 177 (393)
T PRK09705 149 AAITPWLVQHSE-TWYQTLAWWALPAVVAL 177 (393)
T ss_pred HHHHHHHHHhcC-CHHHHHHHHHHHHHHHH
Confidence 988888776542 68877766555544443
No 174
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.28 E-value=1.3e-10 Score=107.17 Aligned_cols=150 Identities=13% Similarity=0.023 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073 154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ 233 (402)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~ 233 (402)
.++......+...........+.|.+.+++|.+..+.+. ......++..++.++.|+++||+|||+.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~------------~~s~~~l~~~~~~~~~g~l~dr~g~k~~~ 74 (381)
T PRK03633 7 PVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGV------------VSSSYFTGNLVGTLLAGYVIKRIGFNRSY 74 (381)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 345555555556666677778899999999998887665 77778888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073 234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH 313 (402)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 313 (402)
..+.++.+++.+..... ++. ..+.+..+..+.+.....+.......+..|++.|+++.
T Consensus 75 ~~~~~~~~~~~~~~~~~---------------------~~~-~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (381)
T PRK03633 75 YLASLIFAAGCAGLGLM---------------------VGF-WSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLL 132 (381)
T ss_pred HHHHHHHHHHHHHHHHh---------------------ccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 99888887777665543 222 23333333333333333344444556788889999999
Q ss_pred hHHHHHHHHhHHHHhHhHHhhhhc
Q 045073 314 GISAAAGKAGAIVGAFGVQYYTQK 337 (402)
Q Consensus 314 ~~~~~~~~~g~~i~~~~~~~~~~~ 337 (402)
+.......+|..+++.+.+.+.+.
T Consensus 133 ~~~~~~~~~g~~~g~~~~~~l~~~ 156 (381)
T PRK03633 133 AAYMMVYYLGTVLGQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhccccc
Confidence 999999999999999998887654
No 175
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.27 E-value=7.5e-12 Score=109.23 Aligned_cols=268 Identities=11% Similarity=0.054 Sum_probs=155.9
Q ss_pred CcchhhhhhccCccc-chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073 3 PLSAVIMSEYANKRT-RGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV 81 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~-Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i 81 (402)
....++++|.+|++. |++++|+.-.+.++|.++||.+|+.+. +..|.+.+|++.++
T Consensus 178 tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilY-----------------------e~~Gk~aPFlVL~~ 234 (464)
T KOG3764|consen 178 TSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILY-----------------------EFAGKSAPFLVLAI 234 (464)
T ss_pred hhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchH-----------------------hhcCCcCcHHHHHH
Confidence 356788999888655 899999999999999999999999987 77889999999888
Q ss_pred HHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073 82 PAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST 161 (402)
Q Consensus 82 ~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (402)
.+++-..+.+++-|.-+ .+.+ +. ++....|++++++. ........
T Consensus 235 v~Lld~~L~l~vi~p~~-----~~~~-~~-----------------------~~~~~~~~Ll~dP~------I~~~agai 279 (464)
T KOG3764|consen 235 VLLLDGALQLLVIEPTE-----MDPD-ST-----------------------EQGTPMWSLLMDPY------ILLIAGAI 279 (464)
T ss_pred HHHHHHHHHHheeCccc-----cCcc-cc-----------------------ccCccHHHHHhCch------Hhhhhcch
Confidence 88887666666543211 1110 00 11122333333331 12222222
Q ss_pred HHHHHHHHHHHHhhhhhh-hhhcCcchh-hhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccc--hhHHHHHHH
Q 045073 162 WFLLDIAFYTINLAQKDI-YPATGIVRK-AAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIG--RFIIQLGGF 237 (402)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~-~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g--rr~~~~~~~ 237 (402)
.+...... .....++.+ .+++. ++. +.+. ......+...+++.+.|.+.||++ |-.....+.
T Consensus 280 ~~~n~~la-fLePtlslwm~e~m~-~p~w~~G~------------~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl 345 (464)
T KOG3764|consen 280 TFSNSSLA-FLEPTLSLWMLETMF-TPGWEVGL------------AFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGL 345 (464)
T ss_pred hhccchHH-HhCcccHHHHHHhcc-CCCcceee------------eecccccchhccCchHHHHHHhcCchhHHHHHHHH
Confidence 22221111 111122222 23343 222 3333 566677888899999999999999 433333333
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccc---hhhhhhh
Q 045073 238 LLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPAR---LRSTCHG 314 (402)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~---~r~~~~~ 314 (402)
+..+++.....+...+ ...+......++..........|. ..+..|.--.+ .-|...+
T Consensus 346 ~~~G~~~~~iP~~~~~------------------~~L~vp~~~l~~~i~~~dasl~P~-l~~lvd~rh~s~~~vYGsVya 406 (464)
T KOG3764|consen 346 ATVGVSSGPIPFATSI------------------AQLWVPNFGLGFGIGLADASLIPT-LGYLVDPRHVSGFNVYGSVYA 406 (464)
T ss_pred HHHHHHhchhHhhhhH------------------HHHhhhhHHHHHHHHHHHHHHhhh-hHHhcchhhccccceeeeHHH
Confidence 3333332222222110 111111111111112222223322 22333332223 5578899
Q ss_pred HHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073 315 ISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 315 ~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 363 (402)
+......+|.++||.+.+.+.+.. |+.|...+.++..++...+..++
T Consensus 407 Iad~a~sla~a~GP~~gg~iv~~i--GF~wl~~iig~~n~iyapvl~ll 453 (464)
T KOG3764|consen 407 IADAAFSLAYAIGPTFGGSLVEAI--GFEWLMTIIGILNLIYAPVLLLL 453 (464)
T ss_pred HHHHHHHHhhhccccccchheeeh--hHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988 88888888888888776665543
No 176
>PTZ00207 hypothetical protein; Provisional
Probab=99.27 E-value=2.8e-10 Score=108.18 Aligned_cols=181 Identities=17% Similarity=0.056 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhc-CcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchh--
Q 045073 154 HLLGTTSTWFLLDIAFYTINLAQKDIYPAT-GIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRF-- 230 (402)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr-- 230 (402)
.+|+++...++...........+..+.+.+ |.+.+.. ....+..+..+++.+|.+.+|++.....||
T Consensus 354 d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~----------~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~ 423 (591)
T PTZ00207 354 RLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDA----------LNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRA 423 (591)
T ss_pred hHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCcc----------ceeeehhhhhHHHHhhHHHHHHHHHHHHhhcc
Confidence 577777777776655555666667777777 6632220 011145666778888888888877333222
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccccccccc
Q 045073 231 ------IIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELF 304 (402)
Q Consensus 231 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 304 (402)
++.+....++.++.+++.... +. ..+.+-.+..+++.+..+++..+.++|+|
T Consensus 424 ~~r~prt~~l~~~~~~~~~~lll~~~~--------------------p~--~~L~~~~~lvg~~~G~~~~~~~~i~selF 481 (591)
T PTZ00207 424 EDRVPITIALFIPSVCIITMLTLFLTL--------------------PK--AALPLPYFIAAFANGFMAATIALVTRTIF 481 (591)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHC--------------------Cc--cHhHHHHHHHHHHhhHhHHHHHHHHHHHh
Confidence 222222222334434333321 10 12222222223333334456777889999
Q ss_pred ccchhhhhhhHHHHHHHHhHHHH-hHhHHhhhhccCC-----------cchhhHHHHHHHHHHHhhheeee-eccC
Q 045073 305 PARLRSTCHGISAAAGKAGAIVG-AFGVQYYTQKGDK-----------QIKQSIITLAVVNFLGFLCSFMV-PETN 367 (402)
Q Consensus 305 p~~~r~~~~~~~~~~~~~g~~i~-~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~i~~i~~~~~-~et~ 367 (402)
. ++-|+-+-+.....-+|.++- -.+.|.+.|.... =++.+|++.+++++++++....+ -+|+
T Consensus 482 g-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~r 556 (591)
T PTZ00207 482 A-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQYR 556 (591)
T ss_pred c-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeehH
Confidence 9 777888777777777777654 4566766654320 35688999999998888876654 4444
No 177
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.27 E-value=5.3e-11 Score=109.55 Aligned_cols=147 Identities=16% Similarity=0.107 Sum_probs=107.5
Q ss_pred HHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHH
Q 045073 204 AMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGL 283 (402)
Q Consensus 204 ~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (402)
.......+++++|+++.++++||+|||..++.+.++..++.+++..... .+....+++-.+
T Consensus 64 ~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~-------------------~~~~e~li~GR~ 124 (485)
T KOG0569|consen 64 LIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKS-------------------APSFEMLILGRL 124 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH-------------------hhhHHHHHHHHH
Confidence 3667788999999999999999999999999888887777766665543 233344444444
Q ss_pred HHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhH-HhhhhccCCcchhhHHHHHHHHHHHhhheee
Q 045073 284 TLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGV-QYYTQKGDKQIKQSIITLAVVNFLGFLCSFM 362 (402)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~ 362 (402)
..+............+..|..|++.||....+......+|..++..+. ..+..... .|+..+.+..+.+++..+...+
T Consensus 125 i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~-~W~~l~~~~~i~~~~~l~~l~~ 203 (485)
T KOG0569|consen 125 IVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTED-LWPYLLAFPLIPALLQLALLPF 203 (485)
T ss_pred HHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCc-chHHHHHHHHHHHHHHHHHHhc
Confidence 444333333345566889999999999999999998888888885433 34443321 6778888888888888888888
Q ss_pred eeccCCcc
Q 045073 363 VPETNGLS 370 (402)
Q Consensus 363 ~~et~~~~ 370 (402)
+||+.+.-
T Consensus 204 ~PESPk~L 211 (485)
T KOG0569|consen 204 LPESPKYL 211 (485)
T ss_pred CCCCcchH
Confidence 99986543
No 178
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.27 E-value=1.5e-10 Score=109.95 Aligned_cols=179 Identities=15% Similarity=0.096 Sum_probs=121.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhcc-----c
Q 045073 154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRI-----G 228 (402)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-----g 228 (402)
+.+......+.+....+.....+|.++++.|.+..+.+. ...+ ... .++.++.+.++||+ |
T Consensus 13 ~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~------------~~~~-~~~-~~~~~l~gpl~Dr~~~~~~G 78 (491)
T PRK11010 13 NSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGF------------FSLV-GQA-YVFKFLWSPLMDRYTPPFLG 78 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHH------------HHHH-HHH-HHHHHHHHHHHHcccccCCC
Confidence 455566666666667777777788898888888776443 1111 111 25678999999999 9
Q ss_pred hhHH-HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccc
Q 045073 229 RFII-QLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPAR 307 (402)
Q Consensus 229 rr~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 307 (402)
||+. ++.+.+..+++...+++... ......+....+...++.....+...++..|.+|++
T Consensus 79 rrr~~ll~~~i~~~~~~~~~a~~~~-------------------~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~ 139 (491)
T PRK11010 79 RRRGWLLATQLLLLVAIAAMGFLEP-------------------GTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAE 139 (491)
T ss_pred CchHHHHHHHHHHHHHHHHHHHcCC-------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 8875 55665555555555544210 122223332233333333444556778899999999
Q ss_pred hhhhhhhHHHHHHHHhHHHHhHhHHhhhh-ccCCcchhhHHHHHHHHHHHhhheeeeeccC
Q 045073 308 LRSTCHGISAAAGKAGAIVGAFGVQYYTQ-KGDKQIKQSIITLAVVNFLGFLCSFMVPETN 367 (402)
Q Consensus 308 ~r~~~~~~~~~~~~~g~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~ 367 (402)
.|+++.++......+|..+++.+...+.+ .. +|+..|++.+++.++..+..++.||++
T Consensus 140 ~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~--GWr~~f~i~a~l~ll~~l~~~~~~e~~ 198 (491)
T PRK11010 140 ERGAGAAISVLGYRLAMLVSGGLALWLADRYL--GWQGMYWLMAALLIPCIIATLLAPEPT 198 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--CHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 99999999999999999999988888877 34 899999998888777766655567754
No 179
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.26 E-value=1.4e-10 Score=106.68 Aligned_cols=170 Identities=12% Similarity=0.029 Sum_probs=109.6
Q ss_pred HHHHHHHHHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHH-HHHH
Q 045073 162 WFLLDIAFYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLG-GFLL 239 (402)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~-~~~~ 239 (402)
.+.............|.++ +++|.+..+.+. ......+..++..++.|+++||+|||+.++. +...
T Consensus 6 ~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~ 73 (375)
T TIGR00899 6 AFLTGIAGALQFPTLSLFLSEEVRARPAMIGL------------FYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLL 73 (375)
T ss_pred HHHHHHHHHHHhhHHHHHHHcccCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHH
Confidence 3344445555556667665 568988877655 5666667777788899999999998886554 4443
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhh--hhHHH
Q 045073 240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTC--HGISA 317 (402)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~--~~~~~ 317 (402)
..++.++.... .+ ...+.+.....+.......+...++..|..|++.|+.+ .+...
T Consensus 74 ~~~~~~~~~~~---------------------~~-~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (375)
T TIGR00899 74 AALACLLFAWN---------------------RN-YFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMR 131 (375)
T ss_pred HHHHHHHHHhc---------------------ch-HHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHH
Confidence 33343333331 12 22222222222222233445556667788777777654 57777
Q ss_pred HHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheee-eeccC
Q 045073 318 AAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM-VPETN 367 (402)
Q Consensus 318 ~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~et~ 367 (402)
....+|..+++.+.+.+.+.. +|+..|++.+++.++..++.++ +||.+
T Consensus 132 ~~~~~g~~ig~~~~~~l~~~~--~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 180 (375)
T TIGR00899 132 AQISLAWVIGPPLAFWLALGF--GFTVMFLTAALAFVLCGVLVWLFLPSYP 180 (375)
T ss_pred HHHhHHHHHhhhHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 778889999999999888776 8999999988887776665543 57643
No 180
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.25 E-value=2.3e-10 Score=104.15 Aligned_cols=155 Identities=11% Similarity=0.013 Sum_probs=118.2
Q ss_pred HhhhhhhhhhcCcchhh-hhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh
Q 045073 173 NLAQKDIYPATGIVRKA-AAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARY 251 (402)
Q Consensus 173 ~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~ 251 (402)
....|.+.+++|++..+ .+. +......+..+..+.+|+++||+|.|+++..+.+..++..+++++.
T Consensus 46 s~a~p~L~~elglT~~qv~G~------------I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa- 112 (511)
T TIGR00806 46 SFITPYLLTVLNFTEETVTNE------------IIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG- 112 (511)
T ss_pred HHHHHHHHHHcCCCHHHhcch------------HHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH-
Confidence 33456777789999887 555 7777778888888899999999999999999988888888877774
Q ss_pred hcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhH
Q 045073 252 DSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGV 331 (402)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~ 331 (402)
.....+.+..++.+.+..+.. ....++...+|++.|+++.|+.+....+|.++++.+.
T Consensus 113 ---------------------~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ 170 (511)
T TIGR00806 113 ---------------------TSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLG 170 (511)
T ss_pred ---------------------HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 223444445555555555555 7788899999999999999999999999999999999
Q ss_pred HhhhhccCCcchh---hHHHHHHHHHHHhhheeeeec
Q 045073 332 QYYTQKGDKQIKQ---SIITLAVVNFLGFLCSFMVPE 365 (402)
Q Consensus 332 ~~~~~~~~~~~~~---~~~~~~~~~~i~~i~~~~~~e 365 (402)
+.+. .. +|+. ..++..+...+++++.+++|.
T Consensus 171 qll~-s~--gWr~y~~Ln~Isl~s~~~a~~~a~~LP~ 204 (511)
T TIGR00806 171 QLLV-TL--GWISYSTLNIISLVFMTFSVFLALFLKR 204 (511)
T ss_pred HHHH-hc--CchhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 8844 34 6664 344545555677777778874
No 181
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.25 E-value=3.6e-11 Score=104.41 Aligned_cols=113 Identities=14% Similarity=0.030 Sum_probs=91.2
Q ss_pred HhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHH
Q 045073 201 ISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMIL 280 (402)
Q Consensus 201 ~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (402)
.++.+.....+.+++.+...|.++||+|||++++++.+..++...+.+.. .+...++.
T Consensus 69 yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S----------------------~~F~afv~ 126 (451)
T KOG2615|consen 69 YAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALS----------------------RNFAAFVL 126 (451)
T ss_pred hhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHH----------------------HHHHHHHH
Confidence 44458888899999999999999999999999999988888877766653 22222222
Q ss_pred HHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhh
Q 045073 281 YGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQ 336 (402)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~ 336 (402)
..+. ++..-+..++..++++|+++++.|+.+++.......+|.++||.+.+++..
T Consensus 127 aR~l-~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 127 ARFL-GGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHh-hhhccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 2333 333556667888999999999999999999999999999999999999877
No 182
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.25 E-value=5.7e-11 Score=92.65 Aligned_cols=133 Identities=18% Similarity=0.214 Sum_probs=97.0
Q ss_pred HHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHH
Q 045073 209 ALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFA 288 (402)
Q Consensus 209 ~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (402)
..++.+++.++.+++.||+|||+.+..+.....++.+..... .+. ....+.....+..
T Consensus 7 ~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~---------------------~~~-~~~~~~~~~~g~~ 64 (141)
T TIGR00880 7 YALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS---------------------SNI-TVLIIARFLQGFG 64 (141)
T ss_pred ehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh---------------------ccH-HHHHHHHHHHHHH
Confidence 455667778889999999999999988877776666555442 122 2222222233333
Q ss_pred hhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee-ec
Q 045073 289 NFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV-PE 365 (402)
Q Consensus 289 ~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~e 365 (402)
.....+....+..|.+|++.|+++.++.+....++..+++.+.+.+.+.. +|+..+.+.+++.+++.+..+++ ||
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 65 AAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL--GWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred HHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc--chHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 33344567778899999999999999999999999999999999988766 78888888887777776665544 54
No 183
>PTZ00207 hypothetical protein; Provisional
Probab=99.24 E-value=2.3e-10 Score=108.77 Aligned_cols=164 Identities=10% Similarity=0.141 Sum_probs=105.5
Q ss_pred HHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHH
Q 045073 164 LLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSIC 243 (402)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~ 243 (402)
......|....+.|.+.+++|++..+.+. ........ ..+.+++|++.||+|+|+++.++.++..++
T Consensus 38 ~~~g~~y~fsv~s~~L~~~lgls~~~l~~------------i~svg~~~-g~~~lp~G~L~Dr~G~R~vllig~ll~~iG 104 (591)
T PTZ00207 38 ICTSFMYAFNLISGAMQARYNLTQRDLST------------ITTVGIAV-GYFLLPYSFIYDYLGPRPIFVLSMTVFCLG 104 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcCHHHHHH------------HHHHHHHH-HHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 33455678888889998899998877443 22222222 234556899999999999999999999998
Q ss_pred HHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHh
Q 045073 244 MAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAG 323 (402)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g 323 (402)
.++.++...... ....+.++++....+.+.....+.....+.+.|| +.||++.|+......+|
T Consensus 105 ~ll~ala~~~~i----------------~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLG 167 (591)
T PTZ00207 105 TLLFALTFQEVI----------------EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLG 167 (591)
T ss_pred HHHHHHHhcccc----------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHH
Confidence 887776422100 1122333333333333333333344556688887 77999999999999999
Q ss_pred HHH-HhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee
Q 045073 324 AIV-GAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF 361 (402)
Q Consensus 324 ~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~ 361 (402)
+++ ++.....+.+ +++..|++.+++.++..++.+
T Consensus 168 saI~~~l~~~l~~~----~~~~~fl~l~vl~~vv~ll~~ 202 (591)
T PTZ00207 168 SAILGSIQLAFFSD----NTSAYFFFLMSFALVVGILAI 202 (591)
T ss_pred HHHHHHHHHHHHHH----hHHHHHHHHHHHHHHHHHHHH
Confidence 985 4444444432 667777777776665544443
No 184
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.24 E-value=7.5e-11 Score=114.78 Aligned_cols=194 Identities=10% Similarity=-0.040 Sum_probs=130.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHH
Q 045073 162 WFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMS 241 (402)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~ 241 (402)
.+............++.+-+++++++.+.+. +.+...++..++.++.+++.||++||+.+.++.++++
T Consensus 42 ~~~~~~~~g~~~~~l~~iek~F~lss~~~G~------------i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~ 109 (633)
T TIGR00805 42 QLQGLLYNGLVNSSLTTIERRFKLSTSSSGL------------INGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMG 109 (633)
T ss_pred HHHHHHHHHHHHhhchhhhhhhCCCCCccee------------eeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHH
Confidence 3333333334444557777789999887766 6777788888888899999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCC---------------C---C---CCCC---ccccC-----CchHHHHHHHHHHHHHHhhCC
Q 045073 242 ICMAILGARYDSLRGKKCD---------------P---K---KDPL---HEYCD-----GNHAWFMILYGLTLFFANFGP 292 (402)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~---------------~---~---~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 292 (402)
++.++.+++.......+.. . . +.+. ..-+. ...+.++++..++.+.+....
T Consensus 110 lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~ 189 (633)
T TIGR00805 110 LGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPI 189 (633)
T ss_pred HHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcc
Confidence 9988887764221110000 0 0 0000 00000 112334444555555555666
Q ss_pred ccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCC--------------------cchhhHHHHHHH
Q 045073 293 NSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDK--------------------QIKQSIITLAVV 352 (402)
Q Consensus 293 ~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~ 352 (402)
.+...+++.|.+|++.|+...|+.+....+|..+|+.+.+.+.+...+ +|+..|++.+++
T Consensus 190 ~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l 269 (633)
T TIGR00805 190 FPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGV 269 (633)
T ss_pred hhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHH
Confidence 677889999999999999999999999999999999988887653210 255667777777
Q ss_pred HHHHhhheeeeeccC
Q 045073 353 NFLGFLCSFMVPETN 367 (402)
Q Consensus 353 ~~i~~i~~~~~~et~ 367 (402)
.++..+..+++|++.
T Consensus 270 ~~l~~v~l~~~p~~l 284 (633)
T TIGR00805 270 ALLTSIPFFFFPKAL 284 (633)
T ss_pred HHHHHHHHHhCcccc
Confidence 766655555556543
No 185
>PRK10133 L-fucose transporter; Provisional
Probab=99.23 E-value=3.9e-10 Score=105.62 Aligned_cols=150 Identities=11% Similarity=-0.012 Sum_probs=107.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073 154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ 233 (402)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~ 233 (402)
.+......++...+.........|.+.+++|.++.+.+. ......++..++.++.|+++||+|||+++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl------------~~~~~~~g~~i~~~~~g~l~dr~G~r~~l 94 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGL------------IQSAFYFGYFIIPIPAGILMKKLSYKAGI 94 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 445555566666667777888889998889999887666 77788888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073 234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH 313 (402)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 313 (402)
..+..+.+++.+++..... .+....+.+..+..+.+.....+....++.|..|.+.|....
T Consensus 95 ~~g~~~~~~~~~l~~~~~~-------------------a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~ 155 (438)
T PRK10133 95 ITGLFLYALGAALFWPAAE-------------------IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRL 155 (438)
T ss_pred HHHHHHHHHHHHHHHHHHh-------------------cCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHH
Confidence 9999888888766432111 122233333333333333333445556667877777777788
Q ss_pred hHHHHHHHHhHHHHhHhHHhh
Q 045073 314 GISAAAGKAGAIVGAFGVQYY 334 (402)
Q Consensus 314 ~~~~~~~~~g~~i~~~~~~~~ 334 (402)
++.+....+|..+++.+.+.+
T Consensus 156 s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 156 NLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999776544
No 186
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.23 E-value=3e-10 Score=101.21 Aligned_cols=282 Identities=14% Similarity=0.049 Sum_probs=159.3
Q ss_pred hhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHH--HHHhHHHHH-
Q 045073 8 IMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIV--LMFGAVPAA- 84 (402)
Q Consensus 8 ~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~--f~~~~i~~~- 84 (402)
+..-|+|+++|..+..+-.++..+|.+++.++...+..... ..+...|... |+.....+.
T Consensus 164 iA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~-----------------~~~~~~~~~~~~f~~~~~l~~l 226 (480)
T KOG2563|consen 164 IAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSK-----------------DSEDNSWLFFTLFLGVECLAAL 226 (480)
T ss_pred HHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCC-----------------CcchhHHHHHHHHHHHHHHHHH
Confidence 34558999999999999999999999999998887762110 1245667764 443222222
Q ss_pred HHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHHH
Q 045073 85 LTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFL 164 (402)
Q Consensus 85 ~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (402)
+.....+..+|.|.. ......+.. .+....+-.++-+.. +.+++....+..
T Consensus 227 ~l~l~~~~~~~~P~t----Pps~s~~~~----------------------~~~~f~~si~~~~~n---~~F~il~~~ygi 277 (480)
T KOG2563|consen 227 LLALVLFVFTKKPPT----PPSASQAAL----------------------QDASFPKSIKSCFKN---RQFIILAICYGI 277 (480)
T ss_pred HHHHHHHhcCCCCCC----CCchhHhhh----------------------hcCcHHHHHHHHHcC---ccHHHHHHHHhh
Confidence 222222233343321 000000000 000011111111111 245555555555
Q ss_pred HHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHH-HHHHHHHHHHH
Q 045073 165 LDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFII-QLGGFLLMSIC 243 (402)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~-~~~~~~~~~~~ 243 (402)
....+++....+...+...|++...+|. ......+++++++.++|.+.||.+.-+. .+.......++
T Consensus 278 ~~g~F~~l~~~l~~~l~~sgY~~~~aG~------------ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~ 345 (480)
T KOG2563|consen 278 GLGLFNSLSTLLNLALCPSGYEGVFAGY------------IGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVG 345 (480)
T ss_pred hHHHHHHHHHHhhhccccccCCccccch------------hHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHH
Confidence 5556666666665455556666655454 7778888899999999999999876443 33333333333
Q ss_pred HHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHh
Q 045073 244 MAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAG 323 (402)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g 323 (402)
.+.+..... .. ... ..+.......+++..+..|+-.-+..|..-|..-++..|+.+..+++-
T Consensus 346 ~~~l~~~t~---~~--------------~~~-viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f 407 (480)
T KOG2563|consen 346 TLMLLTCTL---FL--------------GDS-VIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIF 407 (480)
T ss_pred HHHHHHhhc---cC--------------Cce-EehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHH
Confidence 222221111 11 111 233333334445567778888888888866666788889999999988
Q ss_pred HHHHhHhHHhhhhccCC-c-chhhHHHHHHHHHHHhhheeeeec
Q 045073 324 AIVGAFGVQYYTQKGDK-Q-IKQSIITLAVVNFLGFLCSFMVPE 365 (402)
Q Consensus 324 ~~i~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~i~~i~~~~~~e 365 (402)
+++-.++.+...+..+. + +...-+.....++++.++..++++
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~ 451 (480)
T KOG2563|consen 408 GVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRP 451 (480)
T ss_pred HHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhh
Confidence 88888877777665421 2 333344445555666666666643
No 187
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.21 E-value=4e-10 Score=104.69 Aligned_cols=175 Identities=11% Similarity=0.062 Sum_probs=119.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhcc-----chhH-H
Q 045073 159 TSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRI-----GRFI-I 232 (402)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-----grr~-~ 232 (402)
...++.+...+......+|.++++.|++.++.+. ....... .+..++.|.++||+ |||+ .
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~------------~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~ 70 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGF------------FSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGW 70 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHH--HHHHHHHHHHHHcccccCCCcchhH
Confidence 3455566666777777889999999999998665 2222222 46667899999999 7765 6
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhh
Q 045073 233 QLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTC 312 (402)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~ 312 (402)
+..+.++.+++...+.+... ....+.+..+.+...+......+...+++.|.+|+++|+++
T Consensus 71 l~~~~~~~~l~~~~l~~~~~-------------------~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~ 131 (402)
T PRK11902 71 LLLTQVGLAASIAAMAFCPP-------------------HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAG 131 (402)
T ss_pred HHHHHHHHHHHHHHHHhcCc-------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHH
Confidence 77766666666665544210 12222223222222333444556677889999999999999
Q ss_pred hhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccC
Q 045073 313 HGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETN 367 (402)
Q Consensus 313 ~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~ 367 (402)
.++......+|..+++.+.+.+.+... +|+..|++.+++.++..+..++.||++
T Consensus 132 ~~~~~~g~~~g~i~g~~l~~~l~~~~~-gw~~~f~i~a~~~l~~~l~~~~~~e~~ 185 (402)
T PRK11902 132 AAVKVLGYRLAMLVSGGLALWLADRVL-GWGNTYLLMAGLMLAGALTTLWAPEPE 185 (402)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHhccc-CHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 999999889999999988887776422 899999998887776655544556654
No 188
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.20 E-value=1.1e-10 Score=112.25 Aligned_cols=138 Identities=20% Similarity=0.239 Sum_probs=115.8
Q ss_pred HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073 205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT 284 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (402)
..++..++.++|+++.|.++||+|||++++.+.++..++.+..++ ...+...+++.++
T Consensus 123 ~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~----------------------a~~~~~~~~~Rfl 180 (521)
T KOG0255|consen 123 GQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAF----------------------APNYWMFLIFRFL 180 (521)
T ss_pred HHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHH----------------------hCcHHHHHHHHHH
Confidence 677888999999999999999999999999999998888877666 3445666666777
Q ss_pred HHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeee
Q 045073 285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVP 364 (402)
Q Consensus 285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~ 364 (402)
.+++..+...+.+.+.+|+++++.|+.+..+ ....+.++.+++...+++.. +|++.+++..+..++.+++.++.|
T Consensus 181 ~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~----~Wr~~~~~~~~~~~~~~~~~~l~~ 255 (521)
T KOG0255|consen 181 SGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR----DWRWLFWIISIPSGLFLLLWFLPP 255 (521)
T ss_pred HHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHHccC
Confidence 7777777778899999999999999999999 88888899999988888887 899999998888887777744446
Q ss_pred ccCCc
Q 045073 365 ETNGL 369 (402)
Q Consensus 365 et~~~ 369 (402)
|+++.
T Consensus 256 Es~rw 260 (521)
T KOG0255|consen 256 ESPRW 260 (521)
T ss_pred cChHH
Confidence 87543
No 189
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.20 E-value=5.2e-10 Score=101.87 Aligned_cols=72 Identities=10% Similarity=0.083 Sum_probs=56.5
Q ss_pred cchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHh---H
Q 045073 4 LSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFG---A 80 (402)
Q Consensus 4 ~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~---~ 80 (402)
+...++..|+|+++|+++.++...+..+|.+++++++.++ ..+|||+.+.+. .
T Consensus 134 A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll------------------------~s~gWr~y~~Ln~Isl 189 (511)
T TIGR00806 134 AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL------------------------VTLGWISYSTLNIISL 189 (511)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------HhcCchhHHHHHHHHH
Confidence 5678999999999999999999999999999999999984 346788876553 3
Q ss_pred HHHHHHHHHHhhccCCchh
Q 045073 81 VPAALTYYWRMKMPETARY 99 (402)
Q Consensus 81 i~~~~~~~~~~~~pesp~~ 99 (402)
....+.+++.+++|..++-
T Consensus 190 ~s~~~a~~~a~~LP~~~~s 208 (511)
T TIGR00806 190 VFMTFSVFLALFLKRPKRS 208 (511)
T ss_pred HHHHHHHHHHHhCCCCchh
Confidence 3334556667788865553
No 190
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.18 E-value=5.7e-10 Score=104.34 Aligned_cols=176 Identities=9% Similarity=-0.082 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073 155 LLGTTSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ 233 (402)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~ 233 (402)
++......++..........+.|.++++ +|++..+.+. ......++..++.++.|+++||+|||+.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~------------~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~ 79 (420)
T PRK09528 12 YWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGI------------IFSANSLFALLFQPLYGLISDKLGLKKHL 79 (420)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCchHHH
Confidence 3344444444445555666777777766 8999987766 78888899999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccc--cchhhh
Q 045073 234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFP--ARLRST 311 (402)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p--~~~r~~ 311 (402)
..+..+.++.......... ... .. ................+. ........+..+ .+.++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~-~~~---------------~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~ 141 (420)
T PRK09528 80 LWIISGLLVLFGPFFIYVF-APL---------------LQ-YNILLGAIVGGIYLGFGF-LAGAGAIEAYIERVSRRSGF 141 (420)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHH---------------HH-HHHHHHHHHHHHHhhhhh-ccchhhhhhHHHHHHhhccc
Confidence 8765554433322111100 000 00 000000011111111111 111111122222 244667
Q ss_pred hhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073 312 CHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 312 ~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 363 (402)
..|.......+|..++|.+.+.+.+. +++.+|++.+++.++..++.++.
T Consensus 142 ~~g~~~~~~~~g~~i~~~~~g~l~~~---~~~~~f~~~~~~~~~~~~~~~~~ 190 (420)
T PRK09528 142 EYGRARMWGSLGWALCAFIAGILFNI---NPQINFWLGSGSALILLVLLFFA 190 (420)
T ss_pred cchhhHHhhhHHHHHHHHHHHHHHhc---CchHhHHHHHHHHHHHHHHHhcc
Confidence 78888888999999999999988764 78888888887777766666554
No 191
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.14 E-value=2e-09 Score=100.25 Aligned_cols=195 Identities=14% Similarity=0.039 Sum_probs=119.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhh----ccch
Q 045073 154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLID----RIGR 229 (402)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~d----r~gr 229 (402)
+++.++...+...+.+.....+.+.+++++|.+....+. ......+..++..++.|+++| |+||
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~------------i~~~~~l~~~i~~Pi~G~lSDr~~sr~GR 72 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAWASI------------IWLCGPLSGLLVQPLVGYLSDRCTSRFGR 72 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHhHeeehhcCCCCCCCC
Confidence 455555666666666666677777788889998876554 677777888888999999999 5999
Q ss_pred hHHHHHH-HHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchH---HHHHHHHHHHHHHhhCCccccccccccccc
Q 045073 230 FIIQLGG-FLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHA---WFMILYGLTLFFANFGPNSTTFIVPAELFP 305 (402)
Q Consensus 230 r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 305 (402)
|+.++.+ .....+++.++............+. + .+.... ..+..+.+.. +......+...++++|..|
T Consensus 73 Rrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~-----~--~~~~~~~i~~~~i~~~lld-~~~n~~~~p~rALiaDl~p 144 (477)
T TIGR01301 73 RRPFIAAGAALVAFAVILIGFAADIGHLFGDNL-----D--KKTKPRAIIVFVVGFWILD-VANNMLQGPCRAFLADLTG 144 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCchhhhhccccc-----c--ccchhHHHHHHHHHHHHHH-HHHHHHHHHHHHhcccccC
Confidence 9988765 4444444444433211000000000 0 001111 1111111221 2222233345678999999
Q ss_pred cchh--hhhhhHHHHHHHHhHHHHhHhHHhhh--hcc-----------CCcchhhHHHHHHHHHHHhhheee-eeccCC
Q 045073 306 ARLR--STCHGISAAAGKAGAIVGAFGVQYYT--QKG-----------DKQIKQSIITLAVVNFLGFLCSFM-VPETNG 368 (402)
Q Consensus 306 ~~~r--~~~~~~~~~~~~~g~~i~~~~~~~~~--~~~-----------~~~~~~~~~~~~~~~~i~~i~~~~-~~et~~ 368 (402)
++.| +.+.++.+....+|+++++.+.+... +.. ..+.+..|++.+++.+++.++..+ .+|...
T Consensus 145 ~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~ 223 (477)
T TIGR01301 145 GDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPL 223 (477)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCC
Confidence 8865 57889999999999999998776541 111 015667888888888777776664 488643
No 192
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.13 E-value=1e-09 Score=101.47 Aligned_cols=145 Identities=19% Similarity=0.151 Sum_probs=95.8
Q ss_pred HHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHH
Q 045073 206 FLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTL 285 (402)
Q Consensus 206 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (402)
.....+...++.++.|+++||+|||+.+..+.++..++.++........... ......+.+..+..
T Consensus 41 ~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~r~l~ 106 (394)
T TIGR00883 41 FAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIG--------------IWAPILLLLARLIQ 106 (394)
T ss_pred HHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhH--------------HHHHHHHHHHHHHH
Confidence 3444455567888999999999999999999888887776665532100000 00001222333333
Q ss_pred HHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhh--------ccCCcchhhHHHHHHHHHHHh
Q 045073 286 FFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQ--------KGDKQIKQSIITLAVVNFLGF 357 (402)
Q Consensus 286 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~i~~ 357 (402)
+.+.....+....++.|.+|++.|+...++......+|..+++.+...+.. .. +|+..|.+.+++.+++.
T Consensus 107 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~--~w~~~~~~~~~~~~~~~ 184 (394)
T TIGR00883 107 GFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEW--GWRIPFLVSAVLVLIGL 184 (394)
T ss_pred HhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhcc--chHHHHHHHHHHHHHHH
Confidence 333344455667789999999999999999999999999988877655432 22 78888887776666655
Q ss_pred hheeeeecc
Q 045073 358 LCSFMVPET 366 (402)
Q Consensus 358 i~~~~~~et 366 (402)
.+....||+
T Consensus 185 ~~~~~~~~~ 193 (394)
T TIGR00883 185 YLRRNLEET 193 (394)
T ss_pred HHHHhcCCC
Confidence 444344554
No 193
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.13 E-value=7e-10 Score=101.36 Aligned_cols=159 Identities=12% Similarity=0.023 Sum_probs=105.2
Q ss_pred HhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhcc-----chhHHH-HHHHHHHHHHHHH
Q 045073 173 NLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRI-----GRFIIQ-LGGFLLMSICMAI 246 (402)
Q Consensus 173 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-----grr~~~-~~~~~~~~~~~~~ 246 (402)
....|.+.++.|++.++.+. .... .+...+ .++.|.++||+ |||+.+ +.+.+..+++...
T Consensus 8 ~~~~~~~~~~~g~s~~~~g~------------~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~ 73 (356)
T TIGR00901 8 GNTLPYWLRSKNVSLKTIGF------------FSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLI 73 (356)
T ss_pred HhHHHHHHHHcCCCHHHHHH------------HHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHH
Confidence 34567888899999887554 2222 222222 66899999998 888864 5555555555444
Q ss_pred HHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHH
Q 045073 247 LGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIV 326 (402)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i 326 (402)
+++.. . ....+.+....+..........+...+++.|.+|++.|+.+.++......+|.++
T Consensus 74 l~~~~----~---------------~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~ 134 (356)
T TIGR00901 74 LSFLV----P---------------STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLL 134 (356)
T ss_pred HHcCC----c---------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHH
Confidence 43321 0 1122222222222233333344566778899999999999999999999999999
Q ss_pred HhHhHHhhhhccCCc--------chhhHHHHHHHHHHHhhheee-eecc
Q 045073 327 GAFGVQYYTQKGDKQ--------IKQSIITLAVVNFLGFLCSFM-VPET 366 (402)
Q Consensus 327 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~i~~i~~~~-~~et 366 (402)
++.+.+.+.... + |+.+|++.+++.++..+..++ .||.
T Consensus 135 ~~~l~~~l~~~~--g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 135 SGSLALVLASPE--FANTGLITLWGYIFFWTALLILPGLLVTLFLAKEP 181 (356)
T ss_pred HHHHHHHHhhhc--ccccccccccHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 999988887766 5 999999988887776665554 3664
No 194
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.12 E-value=1.8e-10 Score=100.71 Aligned_cols=136 Identities=20% Similarity=0.202 Sum_probs=117.5
Q ss_pred HHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHH
Q 045073 204 AMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGL 283 (402)
Q Consensus 204 ~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (402)
++.....+.+++.+.+.|.+.||+|+|..+++|++.+..+.+++++ .+...+..+...
T Consensus 110 ~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFaf----------------------g~sy~~l~vAR~ 167 (464)
T KOG3764|consen 110 LLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAF----------------------GNSYPMLFVARS 167 (464)
T ss_pred HHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHH----------------------cchhHHHHHHHH
Confidence 3778889999999999999999999999999999999999988888 444556666666
Q ss_pred HHHHHhhCCccccccccccccccch-hhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheee
Q 045073 284 TLFFANFGPNSTTFIVPAELFPARL-RSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM 362 (402)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~e~~p~~~-r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~ 362 (402)
..+.+.........+++++.||.+. |++++|+...+..+|-.+||.+.+.+.+.. |...+|.+.++++++...+.++
T Consensus 168 LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~--Gk~aPFlVL~~v~Lld~~L~l~ 245 (464)
T KOG3764|consen 168 LQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA--GKSAPFLVLAIVLLLDGALQLL 245 (464)
T ss_pred HhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc--CCcCcHHHHHHHHHHHHHHHHh
Confidence 6666555555677889999999866 799999999999999999999999999988 8999999999999988888776
Q ss_pred e
Q 045073 363 V 363 (402)
Q Consensus 363 ~ 363 (402)
+
T Consensus 246 v 246 (464)
T KOG3764|consen 246 V 246 (464)
T ss_pred e
Confidence 5
No 195
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.11 E-value=2.7e-08 Score=88.60 Aligned_cols=272 Identities=15% Similarity=0.076 Sum_probs=150.8
Q ss_pred hhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH---
Q 045073 6 AVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP--- 82 (402)
Q Consensus 6 ~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~--- 82 (402)
.++++|..|+++|+++.++...+.-+|.+++..+.+.+.. +...=|..-.+..+.
T Consensus 111 lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~----------------------~~s~~rL~~v~~~~a~i~ 168 (403)
T PF03209_consen 111 LALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLD----------------------PFSPERLIQVIQGVALIA 168 (403)
T ss_pred HHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHcc----------------------ccCHHHHHHHHHHHHHHH
Confidence 5788999999999999999999999999999998887762 222234433332222
Q ss_pred HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073 83 AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW 162 (402)
Q Consensus 83 ~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (402)
.++.++..+. .|.++- .....++ +++....+.+++-...++.++++...
T Consensus 169 ~~l~~ia~wg-~E~r~~--~~~~~~~-------------------------~~~~~f~~a~~~~~~~~~a~~f~~fl--- 217 (403)
T PF03209_consen 169 LLLNLIALWG-QEPRRS--RRAAAAE-------------------------RPRPPFREAWRQVWASPQARRFFVFL--- 217 (403)
T ss_pred HHHHHHHHHh-cccCCc--ccccCCC-------------------------CCCccHHHHHHHHHhCCChhHHHHHH---
Confidence 2222222222 222111 0000000 11111111111111111112222222
Q ss_pred HHHHHHHHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhh-ccchhHHHHHHHHHH
Q 045073 163 FLLDIAFYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLID-RIGRFIIQLGGFLLM 240 (402)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~d-r~grr~~~~~~~~~~ 240 (402)
+.....++.....+-.|- +-+|++..+... ++.....+.++|..+.+++.. |.++++...+++...
T Consensus 218 ~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~------------Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~ 285 (403)
T PF03209_consen 218 FLGTLAFFMQDVILEPYGGEVFGMSVGETTR------------LTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLG 285 (403)
T ss_pred HHHHHHHHhhHHHcCCchhHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHH
Confidence 222234444444333333 448888887665 777777888888888887766 678888877888777
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG 320 (402)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~ 320 (402)
.+++.++...... .+.+.+..... ..+++.........+...++..++..|+.+|.....+
T Consensus 286 ~~~f~lii~a~~~------------------~~~~~~~~~~~-l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQ 346 (403)
T PF03209_consen 286 ALAFALIILAGPL------------------GSPWLFRPGVF-LLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQ 346 (403)
T ss_pred HHHHHHHHHHHhc------------------ccchHHHHHHH-HHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHH
Confidence 7777666554321 11112222111 1121111111223445567777888899999988888
Q ss_pred HHhHHHHhHhHHhhhhcc----C--C--cchhhHHHHHHHHHHHhhhee
Q 045073 321 KAGAIVGAFGVQYYTQKG----D--K--QIKQSIITLAVVNFLGFLCSF 361 (402)
Q Consensus 321 ~~g~~i~~~~~~~~~~~~----~--~--~~~~~~~~~~~~~~i~~i~~~ 361 (402)
.+...++.++.+.+.|.. + . +|..+|.+-++..+++.++..
T Consensus 347 A~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 347 AIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 888888887777766532 1 1 566777777777666665544
No 196
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.10 E-value=1.1e-09 Score=99.99 Aligned_cols=150 Identities=15% Similarity=0.089 Sum_probs=103.6
Q ss_pred HHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 045073 171 TINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGAR 250 (402)
Q Consensus 171 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~ 250 (402)
.....+|.+.+++|.+..+.+. ......++..++.++.|+++||+|||+.+..+.++..++.+.. ..
T Consensus 18 ~~~~~lp~l~~~~~~s~~~~g~------------~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~ 84 (355)
T TIGR00896 18 SVGPLLPQIRSALGMSFSVAGL------------LTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SA 84 (355)
T ss_pred cCcccHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hh
Confidence 3455678888999999887666 7788888999999999999999999999998876665554433 11
Q ss_pred hhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHh
Q 045073 251 YDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFG 330 (402)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~ 330 (402)
.+. ..+.+.....+.+.....+....++.|.+| +.|+++.++.+....+|..+++.+
T Consensus 85 ---------------------~~~-~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~ 141 (355)
T TIGR00896 85 ---------------------PGT-ALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAA 141 (355)
T ss_pred ---------------------ccH-HHHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHH
Confidence 122 222222322222222223344456678776 579999999999999999999988
Q ss_pred HHhhhhccCCcchhhHHHHHHHHHHH
Q 045073 331 VQYYTQKGDKQIKQSIITLAVVNFLG 356 (402)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~i~ 356 (402)
.+.+.+..+.+|+..|.+.+++.++.
T Consensus 142 ~~~l~~~~~~~w~~~f~~~~~~~~~~ 167 (355)
T TIGR00896 142 TVPLAQHSGGHWQQALAWWALPALLA 167 (355)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 88777654214777777666554443
No 197
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.10 E-value=5.1e-09 Score=97.49 Aligned_cols=137 Identities=13% Similarity=0.105 Sum_probs=114.5
Q ss_pred HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073 205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT 284 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (402)
+......+.+++.+.+|++.||+|-|+++..+.++.+++.++...... .+. ..+++..++
T Consensus 78 i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~-------------------~~~-~~~~~~R~l 137 (466)
T KOG2532|consen 78 IFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAAS-------------------IGF-YLLLVLRFL 137 (466)
T ss_pred HHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHH-------------------hcc-hhhHHHHHH
Confidence 677778889999999999999999999999999999888888777643 121 245566666
Q ss_pred HHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhc-cCCcchhhHHHHHHHHHHHhhheeee
Q 045073 285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQK-GDKQIKQSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~i~~~~~ 363 (402)
.+.......|....+.+...|+++|++..++......+|.+++-.+.|.+.+. . ||+.+|++.+++.++..++.+++
T Consensus 138 qGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~--GW~sifY~~g~~g~i~~~~w~~~ 215 (466)
T KOG2532|consen 138 QGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSL--GWPSIFYVFGIVGLIWFILWFLF 215 (466)
T ss_pred hHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCC--CCchHHHHHHHHHHHHHHHHHHH
Confidence 66666667788888999999999999999999999999999999899998887 5 99999999999998877766544
No 198
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.10 E-value=3.6e-08 Score=92.38 Aligned_cols=64 Identities=14% Similarity=0.203 Sum_probs=52.0
Q ss_pred CcchhhhhhccCcc--cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhH
Q 045073 3 PLSAVIMSEYANKR--TRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGA 80 (402)
Q Consensus 3 ~~~~~~i~e~~~~~--~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~ 80 (402)
+...++++|.+|++ +|....++...+.++|..++|.+.+++. +..|||+.|.+++
T Consensus 119 ~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~-----------------------~~~Gw~~~F~iaa 175 (493)
T PRK15462 119 SNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQ-----------------------EEYSWAMGFGLAA 175 (493)
T ss_pred ccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHH-----------------------hhhChHHHHHHHH
Confidence 44568899999875 7999999999999999999999999986 5678999999876
Q ss_pred HHHHHHHHH
Q 045073 81 VPAALTYYW 89 (402)
Q Consensus 81 i~~~~~~~~ 89 (402)
+..++.++.
T Consensus 176 igm~l~li~ 184 (493)
T PRK15462 176 VGMIAGLVI 184 (493)
T ss_pred HHHHHHHHH
Confidence 544444333
No 199
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.10 E-value=3.5e-09 Score=111.75 Aligned_cols=114 Identities=12% Similarity=0.013 Sum_probs=85.0
Q ss_pred HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073 205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT 284 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (402)
......++.+++.+++|+++||+|||++++.+.++..+..++..+... ......+++..++
T Consensus 52 ~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~-------------------~~~~~~l~~~r~l 112 (1146)
T PRK08633 52 VNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYY-------------------LGWFWLAFAVTFL 112 (1146)
T ss_pred HHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHH-------------------HccHHHHHHHHHH
Confidence 566677778888899999999999999998887665555444433221 1122334444444
Q ss_pred HHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhc
Q 045073 285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQK 337 (402)
Q Consensus 285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~ 337 (402)
.+.+.....+...+++.|.+|++.|+.++|+......+|.++++.+.+.+...
T Consensus 113 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 113 LGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred HHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44444555667788999999999999999999999999999999999888765
No 200
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.10 E-value=7.1e-10 Score=104.89 Aligned_cols=156 Identities=13% Similarity=0.043 Sum_probs=103.0
Q ss_pred HHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 045073 168 AFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAIL 247 (402)
Q Consensus 168 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~ 247 (402)
........++.+..++|-++...- +.....++..++.++.|+++|.+|||..++.+.++..++.++.
T Consensus 59 ~~~~~a~~l~~I~~diG~~~~~~w-------------~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~ 125 (599)
T PF06609_consen 59 VLVLPASILPYINADIGGSDNWSW-------------FSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVC 125 (599)
T ss_pred HHhccHHHHHHHHHhcCCCccchH-------------HHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHh
Confidence 333334445667778887654322 4455667777788899999999999999999999888888777
Q ss_pred HHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHH
Q 045073 248 GARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVG 327 (402)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~ 327 (402)
+.. .....++....+.+. +.+........++|+.|.+.|..+.++.....-....++
T Consensus 126 atA----------------------~~~~~~iag~~l~Gv-gaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~ 182 (599)
T PF06609_consen 126 ATA----------------------QNMNTFIAGMVLYGV-GAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWIS 182 (599)
T ss_pred hcC----------------------CcHHHHHHHHHHHHH-hhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhccc
Confidence 653 122222222222222 223333445567999999999988877765544444466
Q ss_pred hHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee
Q 045073 328 AFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF 361 (402)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~ 361 (402)
+.+...+.... +||+.|++.++...++++..+
T Consensus 183 ~~ia~~~~~~~--~WRw~~~~~~i~~~i~~vl~~ 214 (599)
T PF06609_consen 183 PLIAQLFAAHS--GWRWIFYIFIIWSGIALVLIF 214 (599)
T ss_pred HHHHHHhccCC--CcchHHHHHHHHHHHHHHHHH
Confidence 66665554443 899999999888777765544
No 201
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.10 E-value=3.5e-09 Score=111.44 Aligned_cols=142 Identities=11% Similarity=-0.002 Sum_probs=97.8
Q ss_pred HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073 205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT 284 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (402)
......+..++..+++|+++||+|||+++.....+..+.......... ....+.+++..++
T Consensus 57 ~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~-------------------~~s~~~l~~~~~l 117 (1140)
T PRK06814 57 AGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFH-------------------LNSVPLLFAALFL 117 (1140)
T ss_pred HHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHH-------------------HhhHHHHHHHHHH
Confidence 555666777888889999999999999764322222221111111111 1123344444455
Q ss_pred HHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeee
Q 045073 285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVP 364 (402)
Q Consensus 285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~ 364 (402)
.+.+.....+...+++.+++|++.|+.++|+.++...+|.++||.+.+.+.... +|+..|+..+++.++++++.+++|
T Consensus 118 ~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 195 (1140)
T PRK06814 118 MGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISG--NFVILVALLMGIAVLGWLASLFIP 195 (1140)
T ss_pred HHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhcc--ccHHHHHHHHHHHHHHHHHHhhCC
Confidence 555555567788899999999999999999999999999999999999998876 888887555555555555555666
Q ss_pred ccC
Q 045073 365 ETN 367 (402)
Q Consensus 365 et~ 367 (402)
+++
T Consensus 196 ~~~ 198 (1140)
T PRK06814 196 KTG 198 (1140)
T ss_pred CCC
Confidence 553
No 202
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.09 E-value=1.5e-11 Score=116.66 Aligned_cols=314 Identities=11% Similarity=0.116 Sum_probs=0.0
Q ss_pred CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCc----hhHHHHH
Q 045073 2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDY----LWRIVLM 77 (402)
Q Consensus 2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~Wr~~f~ 77 (402)
|+++.+|+-|..++++-+.++|+......+|.++|.++++.+.+.+-+....+.. .... ...+. .|..-|+
T Consensus 159 ~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~----~~~i-~p~dp~WvGAWWLGfl 233 (539)
T PF03137_consen 159 YTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPD----GVGI-TPSDPRWVGAWWLGFL 233 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCcccccc----CCCC-CCCCccHHHHHHHHHH
Confidence 5788999999999999999999999999999999999999887654322111100 0000 01222 3555555
Q ss_pred HhHHHHHHHHHHHhhccCC-chhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhh-hhhHHH
Q 045073 78 FGAVPAALTYYWRMKMPET-ARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQ-KHGLHL 155 (402)
Q Consensus 78 ~~~i~~~~~~~~~~~~pes-p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 155 (402)
+.++..++..+..+++|+. |.. ++.++++ +..+....+.+++..+.++..+......+.+.+..++ -..+.+
T Consensus 234 i~g~~~~l~aipl~~FPk~lp~~----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f 307 (539)
T PF03137_consen 234 ICGILLFLSAIPLFFFPKKLPGT----SERQEEK--ESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVF 307 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHcCCccCCCc----ccccchh--hhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHH
Confidence 5554445444444455543 211 0000000 0000000000000000000000000111111111111 111355
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccc--hhHH
Q 045073 156 LGTTSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIG--RFII 232 (402)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g--rr~~ 232 (402)
+...+..........+...|.|.|++. ++.++..+.. +...+...+.++|.+++|+++.|++ .|..
T Consensus 308 ~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~-----------l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~ 376 (539)
T PF03137_consen 308 MCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASL-----------LTGIVSIPGAALGILLGGYIVKKFKLSARGA 376 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-----------HHhhhhcchhheehheEEEEEEEecCcHHHH
Confidence 566666666667777888999999975 8888776544 1334445567788889999999975 3444
Q ss_pred HHHHHHHHHHHHHH---HHHHhhc--------ccC--CCCCCCC----------------CCCccccCCc----hHHHHH
Q 045073 233 QLGGFLLMSICMAI---LGARYDS--------LRG--KKCDPKK----------------DPLHEYCDGN----HAWFMI 279 (402)
Q Consensus 233 ~~~~~~~~~~~~~~---~~~~~~~--------~~~--~~~~~~~----------------~~~~~~~~~~----~~~~~~ 279 (402)
+....+...++.+. ..+.... ... ....... ....+.|+.+ ...+++
T Consensus 377 ~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~ 456 (539)
T PF03137_consen 377 AKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLI 456 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHH
Confidence 44444333333332 1111100 000 0000000 0023444444 222223
Q ss_pred HHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHH-hHHHHhHhHHhhhhcc
Q 045073 280 LYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKA-GAIVGAFGVQYYTQKG 338 (402)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~-g~~i~~~~~~~~~~~~ 338 (402)
+..+..+.......| ....+-...|++.|+.+.|+...+.++ |.+-+|.++|.+.|..
T Consensus 457 ~~~~~~~~~~~~~~p-~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 457 LLFILSFFTFMSQVP-STLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp ------------------------------------------------------------
T ss_pred HHHHHHHHHHhcccc-hheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 322222322333333 333455778999999999999988775 6678999999998853
No 203
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.08 E-value=4.3e-09 Score=97.44 Aligned_cols=174 Identities=12% Similarity=0.037 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHH-HHHhhhhhhhhhHHHhhhccchhHHHH
Q 045073 157 GTTSTWFLLDIAFYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFL-VALFATVPGYWFTVFLIDRIGRFIIQL 234 (402)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~g~l~dr~grr~~~~ 234 (402)
......+.............|.++ +++|.+..+.+. ... ...++.+.+.+.+++ .||+|||+.++
T Consensus 19 ~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~------------~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~ 85 (393)
T PRK15011 19 AFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGF------------FFTGSAVIGILVSQFLAGR-SDKRGDRKSLI 85 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHH-HhcccchhHHH
Confidence 333334444445555555566655 568988887554 322 334445555556666 99999998754
Q ss_pred -HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhh--h
Q 045073 235 -GGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRS--T 311 (402)
Q Consensus 235 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~--~ 311 (402)
.+.+..+++.++.... . ....+.+......+......+....+..+..+++.|. .
T Consensus 86 ~~~~~~~~~~~~~~~~~---------------------~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (393)
T PRK15011 86 VFCCLLGVLACTLFAWN---------------------R-NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVM 143 (393)
T ss_pred HHHHHHHHHHHHHHHHh---------------------h-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHH
Confidence 4444433444333332 1 1222222222222222333445555666666655443 3
Q ss_pred hhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccC
Q 045073 312 CHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETN 367 (402)
Q Consensus 312 ~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~ 367 (402)
..++.+....+|.+++|.+.+.+.+.. +|+..|++.++..++..+..+ ++||.+
T Consensus 144 ~~~~~~~~~~lg~~~g~~i~~~l~~~~--gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 144 FSSFLRAQVSLAWVIGPPLAYALAMGF--SFTVMYLSAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhc--ChHHHHHHHHHHHHHHHHHHHhhcCccC
Confidence 346777788899999999999998877 999999988887776655544 457653
No 204
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.08 E-value=2.3e-09 Score=99.42 Aligned_cols=177 Identities=11% Similarity=-0.090 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073 155 LLGTTSTWFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ 233 (402)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~ 233 (402)
++......++..........+.|.++. ++|.+..+.+. ......+...++.++.|+++||+|||+.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~------------~~~~~~l~~~i~~~~~G~l~Dr~grr~~~ 71 (396)
T TIGR00882 4 FWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGI------------VFSCISLFSILFQPLFGLISDKLGLKKHL 71 (396)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 444555555555566666667777775 47998887665 77888889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073 234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH 313 (402)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 313 (402)
+.+....++............... ........+..+..+.......+....+..+.. +.++...
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~ 135 (396)
T TIGR00882 72 LWIISGLLVLFAPFFIYVFGPLLQ--------------SNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEY 135 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHH--------------HHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhccccc
Confidence 877655544333221111000000 001111111122222222222333333333332 2334566
Q ss_pred hHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheee
Q 045073 314 GISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM 362 (402)
Q Consensus 314 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~ 362 (402)
|.....+.+|..++|.+.+.+.+. +|+..|++.+++.++..++.+.
T Consensus 136 g~~~~~~~~g~~~g~~~~g~l~~~---~~~~~f~~~~~~~~~~~~~~~~ 181 (396)
T TIGR00882 136 GKARMFGCVGWALCASIAGILFSI---DPQIVFWLGSGFALILMLLLMF 181 (396)
T ss_pred chhhhhcccHHHHHHHHHhhhhcc---CchHHHHHHHHHHHHHHHHHHH
Confidence 777788889999999998877654 8889998888777766655544
No 205
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.07 E-value=6.6e-09 Score=95.86 Aligned_cols=165 Identities=10% Similarity=0.015 Sum_probs=103.4
Q ss_pred HHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHH
Q 045073 166 DIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMA 245 (402)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~ 245 (402)
.........++|.+.++.|.+..+.+. ......+..+++.++.|.++||+|||....-..........
T Consensus 17 ~~~~g~~~p~l~~~l~~~g~s~~~iG~------------~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 84 (382)
T PRK11128 17 FFAYGVFLPFWSVWLKGQGYTPETIGL------------LLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFA 84 (382)
T ss_pred HHHHHHHhhhHHHHHHhcCCCHHHHHH------------HHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHH
Confidence 344555666778899999999887766 67777888888899999999999984321111111111111
Q ss_pred HHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHH
Q 045073 246 ILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAI 325 (402)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~ 325 (402)
+..... .+..+.+.+.....+.......+...++..+. .+.|+.+.+.....+.+|..
T Consensus 85 -~~~~~~-------------------~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~ 142 (382)
T PRK11128 85 -VAFWFG-------------------AHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFV 142 (382)
T ss_pred -HHHHHh-------------------cccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHH
Confidence 111110 12223333333333333334445555555544 35678888999999999999
Q ss_pred HHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeecc
Q 045073 326 VGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPET 366 (402)
Q Consensus 326 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et 366 (402)
++|.+.+.+.+.. +|+..|++.++..++..+...+.||.
T Consensus 143 igp~lgg~l~~~~--g~~~~f~~~~~~~~~~~~~~~~~~~~ 181 (382)
T PRK11128 143 IGSALTGKLVSWF--GEQAILWILTAGVASMLLGQLLRPTI 181 (382)
T ss_pred HHHHHHHHHHHHc--ChhHHHHHHHHHHHHHHHHHHccCCC
Confidence 9999999999887 89988887776555544443334543
No 206
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.05 E-value=1.3e-11 Score=116.54 Aligned_cols=145 Identities=19% Similarity=0.196 Sum_probs=107.3
Q ss_pred HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073 205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT 284 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (402)
......++.++|+++.|+++||+|||+.+..+.++..++.++..+... ......+.+..++
T Consensus 51 ~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~-------------------~~~~~~~~~~R~~ 111 (451)
T PF00083_consen 51 LTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPS-------------------YNNFWMLLIGRFL 111 (451)
T ss_pred HHHHHHhhhccccccccccccccccccccccccccccccccccccccc-------------------ccccccccccccc
Confidence 677788999999999999999999999999998888888777666421 0122344444444
Q ss_pred HHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccC-CcchhhHHHHHHHHHHHhhheeee
Q 045073 285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGD-KQIKQSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~~~~ 363 (402)
.+++..+..+....++.|..|++.|+...++.+....+|..++..+........+ ..|+..+.+.++..++..+..+++
T Consensus 112 ~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~ 191 (451)
T PF00083_consen 112 IGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFL 191 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 5555555667788899999999999999999988888888777765544322221 158888888888877777777777
Q ss_pred eccCC
Q 045073 364 PETNG 368 (402)
Q Consensus 364 ~et~~ 368 (402)
||+.+
T Consensus 192 pESP~ 196 (451)
T PF00083_consen 192 PESPR 196 (451)
T ss_pred ccccc
Confidence 99743
No 207
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.03 E-value=1.3e-08 Score=93.92 Aligned_cols=159 Identities=15% Similarity=0.035 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073 160 STWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL 239 (402)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~ 239 (402)
..++.....+.....++|.++++.|.+..+.+. ......+...++.++.+.++||+||+.........
T Consensus 11 ~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~------------~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 78 (382)
T TIGR00902 11 LGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGL------------LIGAALIARFAGGLFFAPLIKDANHIIIALRLLAL 78 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 334444444455666788999999999887665 66677788888888999999999986443222211
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073 240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA 319 (402)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 319 (402)
......+ ..... .+..+...+.....+.+.....+...++..+ +.+.|+...|.....
T Consensus 79 ~~~l~~~-~~~~~-------------------~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~--~~~~~~~~~g~~~~~ 136 (382)
T TIGR00902 79 ASAIFAA-AFSAG-------------------AHNAWLLFIAIGLFALFFSAGMPIGDALANT--WQKQFGLDYGKVRLI 136 (382)
T ss_pred HHHHHHH-HHHHh-------------------hhhHHHHHHHHHHHHHHHccchhHHHHHHHH--HHHHcCCCccHHHHH
Confidence 1111111 11100 1222222222222233233344555555544 357789999999999
Q ss_pred HHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHH
Q 045073 320 GKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNF 354 (402)
Q Consensus 320 ~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (402)
+.+|.+++|.+.+.+.+.. +|+..|.+.++..+
T Consensus 137 ~slG~~~g~~l~g~l~~~~--g~~~~f~~~~~~~~ 169 (382)
T TIGR00902 137 GSAAFIIGSALFGGLIGMF--DEQNILAILTAGLA 169 (382)
T ss_pred HHHHHHHHHHHHHHHHHHc--ChhHHHHHHHHHHH
Confidence 9999999999999999987 89988877665533
No 208
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.03 E-value=3.1e-08 Score=91.94 Aligned_cols=259 Identities=12% Similarity=0.086 Sum_probs=152.7
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
..+.+|++|....++|....++.......+..++|.+++.+. ...|.-.+|.+..+.
T Consensus 131 s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~-----------------------~~~~~a~~f~ia~~~ 187 (463)
T KOG2816|consen 131 SVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLV-----------------------KFLGIALVFLIAAAS 187 (463)
T ss_pred hhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHH-----------------------HhcCchHHHHHHHHH
Confidence 456789999999999999999999999999999999999887 335566777776666
Q ss_pred HHH-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073 83 AAL-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST 161 (402)
Q Consensus 83 ~~~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (402)
.++ ....++++||+-. ++++++ +...+..... ..........+...+. +..+..+.+.+.
T Consensus 188 ~~~~~~y~~~~l~Esl~-----~~~~~~--~~~~~~~~~~---------~~~~~~~~~~~~~~~~---~~~r~~l~l~l~ 248 (463)
T KOG2816|consen 188 GILSLLYMLLFLPESLQ-----EKERSD--ATLRELTPGS---------LDSSHVADAFQSLTKV---GPDRLLLLLLLV 248 (463)
T ss_pred HHHHHHHHhhccccccC-----cccccc--ccccccCCCc---------ccchhhhhhhhhhccc---CCCccchHHHHH
Confidence 665 4455677999832 111111 0000000000 0000000111111111 111122332322
Q ss_pred HHHHHHHHHHHHh-hhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhH-HHhhhccchhHHHHHHHH
Q 045073 162 WFLLDIAFYTINL-AQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFT-VFLIDRIGRFIIQLGGFL 238 (402)
Q Consensus 162 ~~~~~~~~~~~~~-~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-g~l~dr~grr~~~~~~~~ 238 (402)
.+.......+... ..+.+. ..+|++..+.+. ......+...++.++. +.+...+|-|+....|+.
T Consensus 249 ~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~------------~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~ 316 (463)
T KOG2816|consen 249 AFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSD------------LLSLVSILGIISQLLLLPLLSSILGEKRLISLGLL 316 (463)
T ss_pred HHHHHHHHhcCceeEEEEEEeeecCcCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHH
Confidence 2222211111111 223333 247888887554 3333444444444444 478888999988888888
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHH
Q 045073 239 LMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAA 318 (402)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~ 318 (402)
...+.....++.. .. +.+...... ........+...+..+-...++.+|++.++...
T Consensus 317 ~~~~~~~~~af~~---------------------~~-w~~~~~~v~-~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~ 373 (463)
T KOG2816|consen 317 SEFLQLLLFAFAT---------------------ET-WMMFAAGVV-VALAGIVFPAIRAFASILVSPEEQGKVFGIISG 373 (463)
T ss_pred HHHHHHHHHHHhc---------------------cc-hhhhHHHHH-HHhhcchhHHHHhHHHhhcccccccchhhHHHH
Confidence 7777777777642 11 222222222 222344556677778888899999999999999
Q ss_pred HHHHhHHHHhHhHHhhhhcc
Q 045073 319 AGKAGAIVGAFGVQYYTQKG 338 (402)
Q Consensus 319 ~~~~g~~i~~~~~~~~~~~~ 338 (402)
+..+.+.++|.+.+.+...+
T Consensus 374 i~~l~~~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 374 IEGLSGVVSPALYGNIFALT 393 (463)
T ss_pred HHHHhhhhhHHHHHHHHHHH
Confidence 99999999998888775443
No 209
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.99 E-value=9e-09 Score=97.54 Aligned_cols=140 Identities=14% Similarity=0.053 Sum_probs=102.0
Q ss_pred HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073 205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT 284 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (402)
......+-.++.++++|.++||+.||++++.+-++.++..+++.+..... ....+.++++.+.
T Consensus 50 v~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~-----------------~~~~~~Ll~~~fl 112 (524)
T PF05977_consen 50 VQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFG-----------------LLSPWLLLILTFL 112 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhC-----------------cCCHHHHHHHHHH
Confidence 55555666667778899999999999999999887776665555443211 1222334444444
Q ss_pred HHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073 285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 363 (402)
.+.+.....|...+++.|+.|++....+.++.....++..++||.+.|.+.... |...+|.+-++..++........
T Consensus 113 ~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~--G~~~~f~inalsfl~~i~~l~~~ 189 (524)
T PF05977_consen 113 LGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFF--GAAAAFLINALSFLISILALLRW 189 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHc
Confidence 444444556778889999999999999999999999999999999999988876 77778887777666655444433
No 210
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.94 E-value=4.7e-09 Score=93.75 Aligned_cols=154 Identities=18% Similarity=0.130 Sum_probs=106.6
Q ss_pred hHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHH
Q 045073 202 SKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILY 281 (402)
Q Consensus 202 ~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (402)
.........++.++|.++.|++.||+|||+++...++++.++.++.+....... . ......+..+
T Consensus 86 ~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~-~--------------~~~m~~L~~~ 150 (538)
T KOG0252|consen 86 LALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTS-P--------------LGVMMTLCFF 150 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCC-C--------------cchhhHHHHH
Confidence 334777888999999999999999999999999998888888875554322111 0 2344556666
Q ss_pred HHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhh----hccCC---------cchhhHHH
Q 045073 282 GLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYT----QKGDK---------QIKQSIIT 348 (402)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~----~~~~~---------~~~~~~~~ 348 (402)
..+.+.+..+-.|...+.++|..-.+.||+-.+.....+..|...|..+.-.+. ...+. -||..+.+
T Consensus 151 R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~gl 230 (538)
T KOG0252|consen 151 RFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGL 230 (538)
T ss_pred HHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHH
Confidence 667777777888999999999999999998887776666655554443322221 11110 35666666
Q ss_pred HHHHHHHHhhheeeeeccCCcc
Q 045073 349 LAVVNFLGFLCSFMVPETNGLS 370 (402)
Q Consensus 349 ~~~~~~i~~i~~~~~~et~~~~ 370 (402)
.++..++.+..-+.+|||++..
T Consensus 231 g~vpa~~~ly~Rl~M~Et~~Y~ 252 (538)
T KOG0252|consen 231 GAVPALLVLYFRLKMPETARYT 252 (538)
T ss_pred HHHHHHHHHHhhhcCCcchhHH
Confidence 6666666666666679987654
No 211
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.93 E-value=1.5e-08 Score=97.02 Aligned_cols=142 Identities=18% Similarity=0.165 Sum_probs=108.1
Q ss_pred HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073 205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT 284 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (402)
+.....++..+|.++.|+++|++|||+.++.+.+...++.++.+.. ..+..+.+..++
T Consensus 94 ~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a----------------------~~~~~l~~GR~l 151 (513)
T KOG0254|consen 94 LTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALA----------------------PSWYQLIVGRIL 151 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh----------------------hhHHHHHHHHHH
Confidence 7778889999999999999999999999999999999988888874 233444444444
Q ss_pred HHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeee
Q 045073 285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVP 364 (402)
Q Consensus 285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~ 364 (402)
.+.+..+...+...+.+|+.|++.||...++.+....+|..++ ++.+...+....+|+..+.+..+.+++..+..+++|
T Consensus 152 ~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~p 230 (513)
T KOG0254|consen 152 TGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLP 230 (513)
T ss_pred hccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCC
Confidence 4444444445677889999999999999999999888777777 444444432101688888888888887777766678
Q ss_pred ccCCc
Q 045073 365 ETNGL 369 (402)
Q Consensus 365 et~~~ 369 (402)
|+.+.
T Consensus 231 esp~~ 235 (513)
T KOG0254|consen 231 ESPRW 235 (513)
T ss_pred CChHH
Confidence 87543
No 212
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.93 E-value=4.3e-08 Score=83.01 Aligned_cols=168 Identities=17% Similarity=0.159 Sum_probs=108.8
Q ss_pred HHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHH
Q 045073 164 LLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSIC 243 (402)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~ 243 (402)
......|.+..|.|.+-+.+|++.++... +.....++..+| ++.|.+.|++|.+.++.++.....++
T Consensus 13 ~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~------------l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~G 79 (250)
T PF06813_consen 13 LCSGTTYTFSAYSPQLKSRLGYSQSQLNT------------LSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVG 79 (250)
T ss_pred HhcCcccchhhhhHHHHHHhCCCHHHHHH------------HHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 34457788899999999999999887554 555666666654 68899999999999999999888888
Q ss_pred HHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHh
Q 045073 244 MAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAG 323 (402)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g 323 (402)
...+......... ....+.+.++....+.+.............+.|| +.||++.|+.-.+..++
T Consensus 80 Y~~~~l~~~~~i~---------------~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLS 143 (250)
T PF06813_consen 80 YGLLWLAVSGRIP---------------SLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLS 143 (250)
T ss_pred HHHHHHHHhCccC---------------ccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhH
Confidence 8777665432211 1233344444333332222222333344557888 57999999999999998
Q ss_pred HHHHhHhHHhhhhccCCcchhhHHHHH-HHHHHHhhheeee
Q 045073 324 AIVGAFGVQYYTQKGDKQIKQSIITLA-VVNFLGFLCSFMV 363 (402)
Q Consensus 324 ~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~i~~~~~ 363 (402)
+.+-..+...+.+. +....+.+.+ ...+++++..+++
T Consensus 144 aai~t~i~~~~f~~---~~~~fll~la~~~~~v~l~~~~~v 181 (250)
T PF06813_consen 144 AAIFTQIYSAFFGD---DPSSFLLFLAVLPAVVCLVAMFFV 181 (250)
T ss_pred HHHHHHHHHHHcCC---ChHHHHHHHHHHHHHHHHHHhhhe
Confidence 88777666655553 2222233333 3344455555555
No 213
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.87 E-value=2.1e-08 Score=91.06 Aligned_cols=178 Identities=13% Similarity=0.029 Sum_probs=125.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhh-hcC----cchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhc-
Q 045073 153 LHLLGTTSTWFLLDIAFYTINLAQKDIYP-ATG----IVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDR- 226 (402)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr- 226 (402)
+.++.++..-+.--+.+|++...+..|+. +.+ ++.+++.. ....+....-...+++||++||
T Consensus 21 r~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~------------l~~~y~slVY~t~i~GG~laDr~ 88 (498)
T COG3104 21 RGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATG------------LFSAYGSLVYLTPIIGGWLADRV 88 (498)
T ss_pred chHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHH------------HHHHHHHHHHHHHHHHHHHHHHh
Confidence 46677777777777888888877766663 344 77665432 2333333333455689999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccccccccccc
Q 045073 227 IGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPA 306 (402)
Q Consensus 227 ~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 306 (402)
+|+|+.+..+.+++.++.++++.... .....+.+.+.+.. .+....=+....++.|.+|+
T Consensus 89 LG~~~tI~lGail~~iGh~~L~~~~~-------------------~~~~gl~i~L~~I~-iG~Gl~K~NiS~llg~ly~~ 148 (498)
T COG3104 89 LGTRRTIVLGAILMAIGHLVLAISSV-------------------SGPGGLYIGLALII-VGTGLFKPNISSLLGELYPK 148 (498)
T ss_pred cchhHHHHHHHHHHHHHHHHHhcccc-------------------ccccHHHHHHHHHH-hccccccccHHHHHHHhcCC
Confidence 59999999999999999888877420 11112222222222 22334445677788999975
Q ss_pred c--hhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeee
Q 045073 307 R--LRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVP 364 (402)
Q Consensus 307 ~--~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~ 364 (402)
+ .|..+.++..+..++|++++|.+.+++.+.. +|+..|.+.++-..++++..++.+
T Consensus 149 ~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~--g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 149 DDPRRDGGFTLFYMGINIGSLIAPIITGLLAINY--GWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred CCcccCCCccEEEEEeehHHHHHHHHHHHHHHhh--CHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3 3778888888899999999999999999988 899999999998888888776654
No 214
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.84 E-value=2.1e-08 Score=94.65 Aligned_cols=168 Identities=11% Similarity=0.066 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073 160 STWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL 239 (402)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~ 239 (402)
+.........+....+.+.+.++++.+..+.++ +..+.........++.+.+.||+|.|.+.+.|.++
T Consensus 53 l~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~------------i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v 120 (509)
T KOG2504|consen 53 LVNLSTDGLINSFGLLFEELMDYFGSSSSQIAW------------IGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLV 120 (509)
T ss_pred HHHHhhhcchheehhhHHHHHHHhCCCccHHHH------------HHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHH
Confidence 333333334444445667777788877775444 55555555666677899999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073 240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA 319 (402)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 319 (402)
..+++++..+. .+.+.+++.+.+..+.+..........++. .+..+.|+.+.|+....
T Consensus 121 ~~~g~~lssF~---------------------~~i~~l~lt~gvi~G~G~~~~~~paiviv~-~YF~kkR~lA~Gia~~G 178 (509)
T KOG2504|consen 121 AALGLLLSSFA---------------------TSLWQLYLTFGVIGGLGLGLIYLPAVVILG-TYFEKKRALATGIAVSG 178 (509)
T ss_pred HHHHHHHHHHH---------------------hhHHHHHHHHHHHhhccchhhhcchhhhhh-hHhHHHHHHHHhhhhcc
Confidence 99998887775 334445555555444332222222333344 45568899999999999
Q ss_pred HHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073 320 GKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 320 ~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 363 (402)
..+|.++-|.+...+.+.. ||+..+++++.+.+-..+....+
T Consensus 179 sG~G~~~~~~l~~~l~~~~--G~r~~~l~~~~~~l~~~~~~~~~ 220 (509)
T KOG2504|consen 179 TGVGTVVFPPLLKYLLSKY--GWRGALLIFGGISLNVLVAGALL 220 (509)
T ss_pred CCcceeeHHHHHHHHHHHh--CcHHHHHHHHHHHHHHHHHHHHc
Confidence 9999998888888888888 99999999988887666665554
No 215
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.84 E-value=1.5e-07 Score=83.29 Aligned_cols=177 Identities=14% Similarity=0.032 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073 154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ 233 (402)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~ 233 (402)
.+..+...++...+.........|.+.+.+..+..+++. .......+..++++..+++.+|+|+|+-+
T Consensus 14 ~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~l------------iqfaff~gYf~~~lpa~~~~kk~gyk~gi 81 (422)
T COG0738 14 AFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASL------------IQFAFFGGYFIMSLPAGLLIKKLGYKAGI 81 (422)
T ss_pred HHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHH------------HHHHHHHHHHHHhccHHHHHHHhhhHHHH
Confidence 345555555555666666677788888888888887665 77777888888888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073 234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH 313 (402)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 313 (402)
+.++.++++++.++.-... ...+.+.+......+.+..........+++.+.|++..+.-+
T Consensus 82 ~lgL~l~avg~~lF~pAa~-------------------~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rl 142 (422)
T COG0738 82 VLGLLLYAVGAALFWPAAS-------------------SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRL 142 (422)
T ss_pred HHHHHHHHHHHHHHhhhhh-------------------hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHH
Confidence 9999999998877643211 122222222222222222223345666788888888888889
Q ss_pred hHHHHHHHHhHHHHhHhHHhhhhcc-----C------------CcchhhHHHHHHHHHHHhhhee
Q 045073 314 GISAAAGKAGAIVGAFGVQYYTQKG-----D------------KQIKQSIITLAVVNFLGFLCSF 361 (402)
Q Consensus 314 ~~~~~~~~~g~~i~~~~~~~~~~~~-----~------------~~~~~~~~~~~~~~~i~~i~~~ 361 (402)
.+.+.++.+|++++|.+.+.+.... + ..++.++...+...++..+...
T Consensus 143 nl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~ 207 (422)
T COG0738 143 NLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLIL 207 (422)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888877620 0 0456677777766665555444
No 216
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.84 E-value=7.6e-08 Score=89.12 Aligned_cols=181 Identities=15% Similarity=0.091 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhH-HHhhhccchhHHH
Q 045073 155 LLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFT-VFLIDRIGRFIIQ 233 (402)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-g~l~dr~grr~~~ 233 (402)
+..+...++.+...+.....+.|.++++.|.+..+.+.. + ......+..++..++. ++..||+|||+..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~--------~--~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~ 72 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFL--------P--LVGLPWVVKFLWAPLVDNWWSWRLGRRRSW 72 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHH--------H--HHHHHHHHHHHHHHHHhccccccCCcchhH
Confidence 455666777788888888889999999999998876540 0 1234455666666666 5578999998886
Q ss_pred HHHHHHH-HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhh
Q 045073 234 LGGFLLM-SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTC 312 (402)
Q Consensus 234 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~ 312 (402)
+....+. +.+...+.... ... ....+.... .....+......+..-.+..|..+.+.++..
T Consensus 73 i~~~~~~~~~~~~~~~~~~---~~~--------------~~~~~~~~~-~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~ 134 (390)
T TIGR02718 73 VLPMQCLVSACLASLALVG---PDV--------------AGAGWAVGL-LACASLASATQDIATDGMAAEHFNGRTLAKG 134 (390)
T ss_pred HHHHHHHHHHHHHHHHcCC---cch--------------hhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCCHhhhhHH
Confidence 5554222 21222222110 000 111122222 2222222223333444556777777777877
Q ss_pred hhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeec
Q 045073 313 HGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPE 365 (402)
Q Consensus 313 ~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~e 365 (402)
.+.......+|..+++...+.+.+.. +|+.+|++.+++.++..+..++++|
T Consensus 135 ~~~~~~g~~lG~~~g~~~~~~l~~~~--gw~~~f~~~a~l~~~~~~~~~~~~~ 185 (390)
T TIGR02718 135 NAVQIAGVMIGFFGGGAGTLVLFGKF--GQRPAFLLVACVPLASLVCVLWLKD 185 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 77777777888888888888888877 8999999999888776666555533
No 217
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.83 E-value=8.3e-08 Score=90.29 Aligned_cols=170 Identities=18% Similarity=0.135 Sum_probs=102.1
Q ss_pred HHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhc----cchhH-HHHHHHHHHHH
Q 045073 169 FYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDR----IGRFI-IQLGGFLLMSI 242 (402)
Q Consensus 169 ~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr----~grr~-~~~~~~~~~~~ 242 (402)
......|++.++ +.+|.++...+. ......+...+..++.|+++|| +|||+ .++.+....++
T Consensus 15 ~~~~~~~l~~~~~~~~g~s~~~~g~------------i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i 82 (437)
T TIGR00792 15 FAIVSTYLLFFYTDVLGLSAAFVGT------------LFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSI 82 (437)
T ss_pred HHHHHHHHHHHHHHccCCCHHHHHH------------HHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHH
Confidence 334444455555 458998887665 7778888889999999999998 57644 56666666665
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCCccccCCc-hHHHHHHHHHHHHHHhhCCcccccccccccc-ccchhhhhhhHHHHHH
Q 045073 243 CMAILGARYDSLRGKKCDPKKDPLHEYCDGN-HAWFMILYGLTLFFANFGPNSTTFIVPAELF-PARLRSTCHGISAAAG 320 (402)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~ 320 (402)
+.+++...... .. .. .........+...+.. .......++..|+. +++.|++..++.+...
T Consensus 83 ~~~~~~~~~~~--~~--------------~~~~~~~~~~~~~~~~~~~-~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~ 145 (437)
T TIGR00792 83 VLVLLFTTPDF--SA--------------TGKLVYAYITYILLGLFYS-FVNIPYWSLVPAITLDPRERESLSTFRRFGA 145 (437)
T ss_pred HHHHHHhCCCC--Cc--------------chHHHHHHHHHHHHHHHHH-hhcccHhhCcccccCCHHHHHHHHHHHHHHH
Confidence 55544432110 00 11 1122222222222211 22223456667876 5688999999988888
Q ss_pred HHhHHHHhHhHHhhhhccC-----CcchhhHHHHHHHHHHHhhhee-eeeccC
Q 045073 321 KAGAIVGAFGVQYYTQKGD-----KQIKQSIITLAVVNFLGFLCSF-MVPETN 367 (402)
Q Consensus 321 ~~g~~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~i~~~-~~~et~ 367 (402)
.+|..+++.+.+.+....+ .+|+..+.+.+++.++..++.+ ..||++
T Consensus 146 ~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 146 TLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERY 198 (437)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecC
Confidence 8888777666555443211 1788888888877776665544 447654
No 218
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.83 E-value=1.9e-07 Score=87.43 Aligned_cols=142 Identities=15% Similarity=0.037 Sum_probs=102.2
Q ss_pred HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073 205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT 284 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (402)
...+..++.+++.+.++.+.||++-.+.+....++.++..++.... .+....++..++
T Consensus 86 ~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~----------------------~s~~~~ialr~l 143 (495)
T KOG2533|consen 86 LDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAV----------------------HSFPGLIALRFL 143 (495)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH----------------------hhhHHHHHHHHH
Confidence 6667778888888899999999995555554433333322222221 122445555556
Q ss_pred HHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhcc----CCcchhhHHHHHHHHHHHhhhe
Q 045073 285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKG----DKQIKQSIITLAVVNFLGFLCS 360 (402)
Q Consensus 285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~i~~ 360 (402)
.+.+..+.+|....+++..|.++.|++.+|+.++...+|+++|+++...+.... ..+|++.|++-+++.++..++.
T Consensus 144 lGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~ 223 (495)
T KOG2533|consen 144 LGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVV 223 (495)
T ss_pred HHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheE
Confidence 666677778888899999999999999999999999999999998877753311 1199999999999988877666
Q ss_pred e-eeeccCC
Q 045073 361 F-MVPETNG 368 (402)
Q Consensus 361 ~-~~~et~~ 368 (402)
+ ++|+...
T Consensus 224 f~~lp~~P~ 232 (495)
T KOG2533|consen 224 FFFLPDNPS 232 (495)
T ss_pred EEEecCChh
Confidence 6 4576543
No 219
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.74 E-value=2.3e-07 Score=80.87 Aligned_cols=178 Identities=15% Similarity=0.055 Sum_probs=116.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHH
Q 045073 153 LHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFII 232 (402)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~ 232 (402)
.......+.+..-.+-........|..-...|.+..+..+ +......+..+++...|.+.|++|||+.
T Consensus 78 yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~l------------lt~~v~~gmllga~~w~l~~d~~grr~~ 145 (528)
T KOG0253|consen 78 YLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPL------------LTLSVFLGMLVGAMVWGLSADTIGRRKG 145 (528)
T ss_pred hHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhH------------HHHHHHhhhhhhhhhhheehhhhhcchh
Confidence 3444444444444433333444445444445544444333 6667778889999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhh
Q 045073 233 QLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTC 312 (402)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~ 312 (402)
+...+...++...+-.. ......++.+-...+++..+ .|...++-.|..|...|...
T Consensus 146 f~~T~l~t~v~~~is~~----------------------spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~ 202 (528)
T KOG0253|consen 146 FNLTFLVTGVFGVISGA----------------------SPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLL 202 (528)
T ss_pred hhhhHHHHHHHHHhhcC----------------------CCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcc
Confidence 88776665554443332 22223333333333333333 67777777999999999988
Q ss_pred hhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccCC
Q 045073 313 HGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETNG 368 (402)
Q Consensus 313 ~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~~ 368 (402)
+-+. ....+|.++...+.-...... ||++.+....+...+.+.+.+++||..+
T Consensus 203 ~V~~-~~waig~v~ea~law~vm~~~--gwr~~l~~~~~pl~~~a~f~~w~~ESpR 255 (528)
T KOG0253|consen 203 TVMS-FFWAIGQVFEALLAWGVMSNF--GWRYLLFTSSTPLMFAARFLVWVYESPR 255 (528)
T ss_pred hhHH-HHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHhHHHHHHHHHhhcccCcc
Confidence 6666 777788888887777777777 8998888888777777777778888754
No 220
>PRK09669 putative symporter YagG; Provisional
Probab=98.69 E-value=4.1e-07 Score=85.72 Aligned_cols=175 Identities=17% Similarity=0.175 Sum_probs=100.9
Q ss_pred HHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhc----cchh-HHHHHHH
Q 045073 164 LLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDR----IGRF-IIQLGGF 237 (402)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr----~grr-~~~~~~~ 237 (402)
..+........|++.++. .+|++....+. +..+..+...+..++.|+++|| +||| +.++.+.
T Consensus 20 ~~~~~~~~~~~~l~~~~t~~~gls~~~~g~------------i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~ 87 (444)
T PRK09669 20 ACNLVWQTVMLFLAYFYTDVFGLSAAIMGT------------MFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFA 87 (444)
T ss_pred hhhHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHH
Confidence 333344444555665554 48999887665 7777788888888999999999 6764 5555565
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccccccccc-ccchhhhhhhHH
Q 045073 238 LLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELF-PARLRSTCHGIS 316 (402)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~ 316 (402)
...+++.+++..... .... ...++..+.+.+...+.. .......++.+|+. +++.|+...+..
T Consensus 88 ~~~~i~~~l~f~~p~-~~~~--------------~~~~~~~~~~~l~~~~~t-~~~ip~~al~~~~t~~~~eR~~l~~~r 151 (444)
T PRK09669 88 IPFGVVCLLTFYTPD-FGAT--------------GKIIYACVTYILLSLVYT-AINVPYCAMPGAITNDPRERHSLQSWR 151 (444)
T ss_pred HHHHHHHHHHHhCCC-CCcc--------------hHHHHHHHHHHHHHHHHH-hhcchHHHhHHHhcCCHHHHHHHHHHH
Confidence 555555443322110 0000 112222322323322222 22223456778877 557799888888
Q ss_pred HHHHHHhHHHHhHhHHhhhhccC-----CcchhhHHHHHHHHHHHhhheee-eecc
Q 045073 317 AAAGKAGAIVGAFGVQYYTQKGD-----KQIKQSIITLAVVNFLGFLCSFM-VPET 366 (402)
Q Consensus 317 ~~~~~~g~~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~i~~~~-~~et 366 (402)
.....+|+.+++.+...+....+ .+|...+.+.+++.++..+..++ .+|.
T Consensus 152 ~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~ 207 (444)
T PRK09669 152 FALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKER 207 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEe
Confidence 88888888887765544433221 15566666666666655544443 3554
No 221
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.60 E-value=8.2e-07 Score=83.95 Aligned_cols=177 Identities=13% Similarity=-0.019 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccc----
Q 045073 154 HLLGTTSTWFLLDIAFYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIG---- 228 (402)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g---- 228 (402)
........++.+... +......+.++ +++|.+..+.+. ......+...+ ..+.|.++||++
T Consensus 27 ~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~------------~~sl~~lpw~~-K~l~g~l~D~~~i~G~ 92 (468)
T TIGR00788 27 VLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQR------------LVGLSSLGWAL-KPFAGVMSDTFPLFGY 92 (468)
T ss_pred HHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHH------------HHHHHHHHHHH-HHHHHHHHHhcCCCCc
Confidence 344555566777766 44444455555 468999887543 33333333333 335999999997
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccc
Q 045073 229 -RFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPAR 307 (402)
Q Consensus 229 -rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 307 (402)
||+.++++.++.+ +....... . . .+......+......++........-++..|..+ +
T Consensus 93 rRr~~l~~~~~l~~-~~~~~~l~-~----~--------------~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~ 151 (468)
T TIGR00788 93 TKRWYLVLSGLLGS-AILYGLLP-G----K--------------VSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-E 151 (468)
T ss_pred cchHHHHHHHHHHH-HHHHHhcc-c----c--------------cchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-c
Confidence 6776666654442 11111111 0 0 1111222212222222233333456677788888 5
Q ss_pred hhhhhhh---HHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccC
Q 045073 308 LRSTCHG---ISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETN 367 (402)
Q Consensus 308 ~r~~~~~---~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~ 367 (402)
.++...+ .......+|..+++.+.+.+.+.. +|+..|++.+++.++..+..++++|.+
T Consensus 152 ~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~--~~~~~f~~~a~l~ll~~~~~~~~~E~~ 212 (468)
T TIGR00788 152 SPSAGPSLVSWMWGASATGGLISSLLGGPLLDKT--LTRILFLITAALLLLQLFVSNLSKERR 212 (468)
T ss_pred CCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhc--CcchHHHHHHHHHHHHHHHHHhccccc
Confidence 5544333 333334579999999999998877 899999988888877755555667764
No 222
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.59 E-value=1.2e-06 Score=81.70 Aligned_cols=63 Identities=3% Similarity=-0.085 Sum_probs=46.0
Q ss_pred hhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccch-hHHHHHHHHHHHHHHHHHH
Q 045073 174 LAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGR-FIIQLGGFLLMSICMAILG 248 (402)
Q Consensus 174 ~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~gr-r~~~~~~~~~~~~~~~~~~ 248 (402)
.+++.++ ++.|++..+.+. ......++.+++.++.|+++||+|| |+++.++.++..+...+..
T Consensus 23 ~~l~~~l~~~~g~s~~~iGl------------~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~ 87 (418)
T TIGR00889 23 VTLGSYMSKTLHFSGAEIGW------------VYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAA 87 (418)
T ss_pred HHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 3444444 558999887776 7888889999999999999999965 7677766665555444433
No 223
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.58 E-value=6.2e-07 Score=82.51 Aligned_cols=188 Identities=11% Similarity=0.019 Sum_probs=115.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh--cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccc
Q 045073 151 HGLHLLGTTSTWFLLDIAFYTINLAQKDIYPA--TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIG 228 (402)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g 228 (402)
+||.++...+..+...+.+.....-.-.|.++ .+-+.+..|. ......++..+++++.|+...|.+
T Consensus 32 ~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~------------viaa~slg~~i~~liF~~Ws~k~~ 99 (488)
T KOG2325|consen 32 NWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGL------------VIAASSLGHAIFSLIFGIWSNKTG 99 (488)
T ss_pred chHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhH------------HHHHHHHHHHhcchhhcccccccC
Confidence 34455555555555544433332222334444 3333333333 666688999999999999999988
Q ss_pred h-hHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccc
Q 045073 229 R-FIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPAR 307 (402)
Q Consensus 229 r-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 307 (402)
. |+.++.+.+++.++.++........ ++ ..++++.+-...+.+.+..+..-.|+++..-.+
T Consensus 100 ~~k~Pli~s~ii~~~g~llY~~l~~~~-----------------~~-~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~ 161 (488)
T KOG2325|consen 100 SVKKPLIVSFLIAIIGNLLYLALAYVP-----------------NG-VKYLMLVARILTGVGVGNFAVLRAYIADASTVE 161 (488)
T ss_pred CcccCHHHHHHHHHHHHHHHHHHHhcc-----------------cc-hHHHHHHHHHHcCcCcccHHHHHHHHHhccCcc
Confidence 5 6666778888888887774433211 21 233333333333334556667888899988888
Q ss_pred hhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCC-----------cchhhHHHHHHHHHHHhhheee-eeccCC
Q 045073 308 LRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDK-----------QIKQSIITLAVVNFLGFLCSFM-VPETNG 368 (402)
Q Consensus 308 ~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~i~~i~~~~-~~et~~ 368 (402)
.|.++.+......-+|.++||.+...+.....+ .+..+-++.+++.++.+++.++ ++|...
T Consensus 162 dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 162 DRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred chHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 889888888877778888888654443322111 3446777888888887776664 466443
No 224
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.55 E-value=4.8e-07 Score=84.42 Aligned_cols=151 Identities=12% Similarity=0.040 Sum_probs=83.5
Q ss_pred HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073 205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT 284 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (402)
...+..++.++|..+......+..-|+++..+.++.++..+.-......+... . |+ .+.+..+.--.+.
T Consensus 260 ~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~-~--------Gi--~d~~f~lgd~~l~ 328 (433)
T PF03092_consen 260 LSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLD-L--------GI--PDQWFALGDTILE 328 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeee-e--------Cc--CCeEEEEEhHHHH
Confidence 44666677777777776666666667776665544333322211111100000 0 00 0111111111112
Q ss_pred HHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCC------cchhhHHHHHHHHHHHhh
Q 045073 285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDK------QIKQSIITLAVVNFLGFL 358 (402)
Q Consensus 285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~------~~~~~~~~~~~~~~i~~i 358 (402)
.........| ...+++|+.|+..-|+.+++...+.++|..++..+...+.+..+. +.....++..++.++...
T Consensus 329 ~~~~~i~~mP-~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ 407 (433)
T PF03092_consen 329 EVIGMIAFMP-SLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLP 407 (433)
T ss_pred HHHHHHHHHH-HHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHH
Confidence 2222233333 334679999999999999999999999999998887777665431 334455555566666666
Q ss_pred heeeeeccC
Q 045073 359 CSFMVPETN 367 (402)
Q Consensus 359 ~~~~~~et~ 367 (402)
+..++|+.+
T Consensus 408 ll~lLp~~~ 416 (433)
T PF03092_consen 408 LLFLLPPQK 416 (433)
T ss_pred HHHHcCCCc
Confidence 666666543
No 225
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.54 E-value=1.8e-06 Score=81.96 Aligned_cols=178 Identities=15% Similarity=0.041 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhh----ccch-hHHH
Q 045073 160 STWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLID----RIGR-FIIQ 233 (402)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~d----r~gr-r~~~ 233 (402)
+..+..++.......|++.|+.+ .|+++...+. +..+.-+...+..++.|+++| |+|| |+.+
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~------------i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~i 80 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGT------------LFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWI 80 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHhhchheeehhcCCCCCCCcchhH
Confidence 33344445555566667777765 6998876555 667777888888889999999 5688 5556
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCc-hHHHHHHHHHHHHHHhhCCcccccccccccc-ccchhhh
Q 045073 234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGN-HAWFMILYGLTLFFANFGPNSTTFIVPAELF-PARLRST 311 (402)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~ 311 (402)
+.+....++++.++.... ... +.. .++..+.+.+...+... ......++..|+. +++.|..
T Consensus 81 l~g~i~~~i~~~llf~~p---~~~-------------~~~~~~~~~~~~~l~~~~~t~-~~ip~~al~~~lt~~~~eR~~ 143 (473)
T PRK10429 81 LIGTLANSVVLFLLFSAH---LFE-------------GTAQYVFVCVTYILWGMTYTI-MDIPFWSLVPTLTLDKREREQ 143 (473)
T ss_pred hhhhHHHHHHHHHHHcCC---CCC-------------ccHHHHHHHHHHHHHHHHHHH-HcchHHhhhHHhCCCHHHHHH
Confidence 666665555544432210 000 011 11222222222222222 2233556778887 5789999
Q ss_pred hhhHHHHHHHHhHHHHhHhHHhhhhccCC-----cchhhHHHHHHHHHHHhhheee-eecc
Q 045073 312 CHGISAAAGKAGAIVGAFGVQYYTQKGDK-----QIKQSIITLAVVNFLGFLCSFM-VPET 366 (402)
Q Consensus 312 ~~~~~~~~~~~g~~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~i~~~~-~~et 366 (402)
..+.-..+..+|+.+.+.+...+....+. ++.....+.+++.+++.++.++ .+|.
T Consensus 144 l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~ 204 (473)
T PRK10429 144 LVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEV 204 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceec
Confidence 88887777777766665444333222110 3444555555555554444443 4654
No 226
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.53 E-value=3.1e-07 Score=84.43 Aligned_cols=302 Identities=15% Similarity=0.084 Sum_probs=144.2
Q ss_pred hhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHHH
Q 045073 6 AVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAAL 85 (402)
Q Consensus 6 ~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~~ 85 (402)
-+|+++....++|.++++....+..+|.++||.++..+.....+ .++-.|+. .-.-+..+-++.++..++
T Consensus 151 R~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~-----G~~i~~~~-----~~n~YTap~w~m~i~~i~ 220 (488)
T KOG2325|consen 151 RAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEK-----GFMILPGL-----IFNMYTAPAWLMAILWII 220 (488)
T ss_pred HHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCC-----ceEEcCcc-----eEEecchHHHHHHHHHHH
Confidence 46889988999999999999999999999999998877632211 11111111 111233445566666665
Q ss_pred HH-HHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHHH
Q 045073 86 TY-YWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFL 164 (402)
Q Consensus 86 ~~-~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (402)
.+ ++.+++.|.++--..++.++++ ++..+. +..+.+. ..+...+.+.+..+.
T Consensus 221 ~~v~i~~~f~E~~~~~~~~~~~~~~--------------~~~~~~-----------~~~~~~~--~d~~~~~vc~~~~~~ 273 (488)
T KOG2325|consen 221 YIVIILFFFKEVYRGIIDKKKRSVE--------------EEKSDI-----------EKVKKPK--LDWVAVLVCIFLRFV 273 (488)
T ss_pred HHHHHHhheeecccCccccccccch--------------hhccch-----------hhhccCC--hhHHHHHHHHHHHHH
Confidence 43 3445578875431110000000 000000 0001111 111244455555555
Q ss_pred HHHHHHHHHh-hhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhh-hccchhHHHHHHHHHHHH
Q 045073 165 LDIAFYTINL-AQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLI-DRIGRFIIQLGGFLLMSI 242 (402)
Q Consensus 165 ~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~-dr~grr~~~~~~~~~~~~ 242 (402)
....+..... ..+.....++++.+++.. ..+.......+..++-.+...+.. -++.+|..++.+.+....
T Consensus 274 ~~~~~~~iet~~~~~~m~~y~w~~~~av~--------~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~g~l~~f~ 345 (488)
T KOG2325|consen 274 VNFIATTIETLSSALTMVMYGWTGSEAVL--------YNGITLSISGILSVILLLLYIFTRLGKIDKRRIILLGFLIFFL 345 (488)
T ss_pred HHHHHHHHHhccchHHHHHhccccchHHH--------hhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeeehHHHHHH
Confidence 5555544333 334444456776665433 222233333333333322333332 233345444444333333
Q ss_pred HHHHHHHHhhcccCCCCCCCC-------CCCccccCCchHHHHHHHH----HHHHHHhhCCccccccccccccccchhhh
Q 045073 243 CMAILGARYDSLRGKKCDPKK-------DPLHEYCDGNHAWFMILYG----LTLFFANFGPNSTTFIVPAELFPARLRST 311 (402)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 311 (402)
+..+...+..... .+.+.-+ ..-..||+.....-..++. +..+...-.......+.-+|+..++.+++
T Consensus 346 ~~~i~~yp~~~~s-~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~ 424 (488)
T KOG2325|consen 346 SYYIFTYPWGFYS-GPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGT 424 (488)
T ss_pred hhheeeeeccccc-cccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCccccc
Confidence 3222222211111 0000000 0011222222211111111 11111111112234456688999999999
Q ss_pred hhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHH
Q 045073 312 CHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFL 355 (402)
Q Consensus 312 ~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 355 (402)
..++....+..+..++|.+........ +.++.+.+.++..++
T Consensus 425 ~qg~~~~~~s~~~~~~~~~~t~~~~~~--g~~~v~~~~~~~~l~ 466 (488)
T KOG2325|consen 425 MQGVFSISGSIARVVGPIFSTAIFTLS--GPRPVWIILLCLLLV 466 (488)
T ss_pred eeEEEEeccchhhhhhHHHHhhhHHhc--CccHHHHHHHHHHHH
Confidence 999999999999999998877777666 666665555544443
No 227
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.52 E-value=7.7e-07 Score=83.45 Aligned_cols=171 Identities=18% Similarity=0.169 Sum_probs=103.6
Q ss_pred HHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhh----ccchhHH-HHHHHHHHH
Q 045073 168 AFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLID----RIGRFII-QLGGFLLMS 241 (402)
Q Consensus 168 ~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~d----r~grr~~-~~~~~~~~~ 241 (402)
.......+...++. ..|+++...+. ...+.-+...+..++.|+++| |+|||+. ++++....+
T Consensus 16 ~~~~~~~~~~~f~~~~~gl~~~~~g~------------i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~ 83 (428)
T PF13347_consen 16 IWSLLSSYLLYFYTDVLGLSPALAGL------------ILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLA 83 (428)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHH
Confidence 33334445455554 46898876554 666667777778889999999 7887655 445666666
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCCccccCCch-HHHHHHHHHHHHHHhhCCccccccccccccc-cchhhhhhhHHHHH
Q 045073 242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNH-AWFMILYGLTLFFANFGPNSTTFIVPAELFP-ARLRSTCHGISAAA 319 (402)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~ 319 (402)
++++++..... .+...... .+..+.+.++..+ .........++..|+.+ ++.|....+....+
T Consensus 84 ~~~~llf~~~p--------------~~~~~~~~~~~~~~~~~l~~~~-~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~ 148 (428)
T PF13347_consen 84 LSFFLLFSPPP--------------AGLSFTAKLVWLFVFYILFDIA-YTFVQIPYNALIPELTPDPDERTRLSSWRMIF 148 (428)
T ss_pred HHHHHhhcccc--------------chhhhhhHHHHHHHHHHHHHHh-hhhccCchhhcCccccccHhhhhhHHHHHHHH
Confidence 65555443200 00000111 1222223323222 22233345677899987 47899999999999
Q ss_pred HHHhHHHHhHhHHhhhhccCC-----cchhhHHHHHHHHHHHhhheee-eec
Q 045073 320 GKAGAIVGAFGVQYYTQKGDK-----QIKQSIITLAVVNFLGFLCSFM-VPE 365 (402)
Q Consensus 320 ~~~g~~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~i~~~~-~~e 365 (402)
..+|..+...+.+.+.+..+. +|.....+.+++.+++.++.++ .+|
T Consensus 149 ~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 149 SMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 988887777777666654432 4667777777777766666554 377
No 228
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.50 E-value=4.9e-07 Score=82.70 Aligned_cols=133 Identities=12% Similarity=0.143 Sum_probs=99.5
Q ss_pred HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073 205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT 284 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (402)
.......+.++..++.+++.+|+|+-+++..++.+..+=++.++... +. |.++.+-++
T Consensus 411 ~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~---------------------n~-W~vLPieil 468 (618)
T KOG3762|consen 411 VSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQ---------------------NP-WMVLPIEIL 468 (618)
T ss_pred hhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhc---------------------Cc-hheeeHHHH
Confidence 66677788888888999999999999999888777776666666542 22 333333444
Q ss_pred HHHHhhCCccccccccccccccchhhhhhhHHHHHHH-HhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee
Q 045073 285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGK-AGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF 361 (402)
Q Consensus 285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~-~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~ 361 (402)
.+......+....+|++...|++.|.++.++...... +|-.+|+++.|.+.... +-+..|.++++.+++.+++..
T Consensus 469 qgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f--g~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 469 QGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF--GARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee--hhHHHHHHHHHHHHHHHHHHH
Confidence 4443344455677889999999999999999877654 67779999999998887 778888888887776665544
No 229
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.47 E-value=5.2e-07 Score=81.85 Aligned_cols=173 Identities=10% Similarity=0.043 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHH
Q 045073 156 LGTTSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQL 234 (402)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~ 234 (402)
+......+...+.+-....+.+.++++ .|++..+.|. +.....+..++..++.|.++||+|.|+-++
T Consensus 10 ~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~------------i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll 77 (412)
T PF01306_consen 10 WWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGI------------IFSAGSLFALLAQPVYGFISDKLGLKKHLL 77 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHH------------HHHHHHHHHHHTHHHHHHHHHHCTTCSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHH------------HHHHHHHHHHHHHHhHHHhcchhhhhHHHH
Confidence 333333344333444455566777865 8999998776 788888889999999999999999766554
Q ss_pred HHHHHHHHHHHHHHH-HhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccccccccccc---chhh
Q 045073 235 GGFLLMSICMAILGA-RYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPA---RLRS 310 (402)
Q Consensus 235 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~---~~r~ 310 (402)
.......+....+.. ....... .+. .... .+.....+....+... +.|.+-. +..+
T Consensus 78 ~~i~~l~~l~~pff~~v~~pll~---------------~n~-~lg~--iig~i~l~~~f~~~~~--~~Ea~~er~sr~~~ 137 (412)
T PF01306_consen 78 WFIAILLLLFGPFFIYVFGPLLQ---------------SNF-WLGA--IIGGIYLGLVFNAGVP--LSEAYAERVSRRNG 137 (412)
T ss_dssp HHHHHHHHTCHHHHHHTHHHHHH---------------TT--HHHH--HHTTTTTTTTTTTHHH--HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---------------HHH-HHHH--HHHHHHHHHHHcccch--HHHHHHHHHHHHhc
Confidence 433222111111111 1000000 011 1111 1111111112221111 2344332 2335
Q ss_pred hhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073 311 TCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 311 ~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 363 (402)
.-.|=....+.+|.++++.+.|.+.+. +....|++..+..++..++.++.
T Consensus 138 feYG~~R~wGSig~ai~s~~~G~L~~i---~p~~~fwi~s~~~~il~lll~~~ 187 (412)
T PF01306_consen 138 FEYGRARMWGSIGFAIASLLAGILFNI---NPNIIFWIASAAAIILLLLLLLL 187 (412)
T ss_dssp S-HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHSS
T ss_pred CCcchHHHHhhHHHHHHHHHhheeeee---CccHHHHHHHHHHHHHHHHHHHc
Confidence 557778889999999999999998875 55677777665555444444443
No 230
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.46 E-value=3.7e-06 Score=76.82 Aligned_cols=142 Identities=16% Similarity=0.068 Sum_probs=85.4
Q ss_pred HHHHHHhhhhhhhhhHHHhhhccchh-------HHHHHHHHHHHHHHHHHHHHhhcccC-CCCCCCCCCCccccCCchHH
Q 045073 205 MFLVALFATVPGYWFTVFLIDRIGRF-------IIQLGGFLLMSICMAILGARYDSLRG-KKCDPKKDPLHEYCDGNHAW 276 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr~grr-------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 276 (402)
..+++.+.-++.+++..++..+.+++ .-+-+++.+++.+++++......... .+ ..+.+
T Consensus 329 fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~-------------~~s~~ 395 (498)
T COG3104 329 FQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSG-------------LVSVW 395 (498)
T ss_pred HHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCC-------------CcCHH
Confidence 55666666666666666776664433 22344556666666666555332222 10 23334
Q ss_pred HHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHh------hhhccCCcchhhHHHHH
Q 045073 277 FMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQY------YTQKGDKQIKQSIITLA 350 (402)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~------~~~~~~~~~~~~~~~~~ 350 (402)
+.+...++..++-....|+..+++..+.|+...+..++........++.++..+.+. ..+.. .....|+..+
T Consensus 396 ~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~--~~~~~F~~~g 473 (498)
T COG3104 396 WLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAF--IEGRVFGTIG 473 (498)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhh--hhhhhHHHHH
Confidence 444444445555677778888999999999999998888887777777777665552 11111 3345666666
Q ss_pred HHHHHHhhhee
Q 045073 351 VVNFLGFLCSF 361 (402)
Q Consensus 351 ~~~~i~~i~~~ 361 (402)
...++..+..+
T Consensus 474 ~v~i~~~~~~~ 484 (498)
T COG3104 474 VVAIVIGILLL 484 (498)
T ss_pred HHHHHHHHHHH
Confidence 66555544444
No 231
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.42 E-value=1.9e-05 Score=69.65 Aligned_cols=157 Identities=17% Similarity=0.035 Sum_probs=91.6
Q ss_pred hhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 045073 178 DIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGK 257 (402)
Q Consensus 178 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (402)
.++++.|++..+.+. +.......+.+...+.|.++||+|||+.-+...++.+++++..-.
T Consensus 59 ~LY~~yg~~~~qIa~------------Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~-------- 118 (354)
T PF05631_consen 59 ALYESYGFSEHQIAI------------LFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHS-------- 118 (354)
T ss_pred HHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhc--------
Confidence 344678888876544 666677777777788999999999999888776666666643222
Q ss_pred CCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccc-ccccc----cccchhhhhhhHHHHH-HHHhHHHHhHhH
Q 045073 258 KCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFI-VPAEL----FPARLRSTCHGISAAA-GKAGAIVGAFGV 331 (402)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~----~p~~~r~~~~~~~~~~-~~~g~~i~~~~~ 331 (402)
+....+.+-.++.+.......+..=+ ++.|. +|.+..+...+..... +.+..+++..+.
T Consensus 119 ---------------~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a 183 (354)
T PF05631_consen 119 ---------------SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVA 183 (354)
T ss_pred ---------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHH
Confidence 11233333333333322222221111 23443 5555555555544422 334445555566
Q ss_pred HhhhhccCCcchhhHHHHHHHHHHHhhheeee-eccCCc
Q 045073 332 QYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV-PETNGL 369 (402)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~et~~~ 369 (402)
..+.+..+.+...+|....++.+++.++.... +|..+.
T Consensus 184 ~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~ 222 (354)
T PF05631_consen 184 NVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGD 222 (354)
T ss_pred HHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCC
Confidence 66666553345688888888888777766543 666544
No 232
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.40 E-value=9.6e-06 Score=74.74 Aligned_cols=163 Identities=15% Similarity=0.088 Sum_probs=89.6
Q ss_pred HHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccc-hhHHHHHHHHHHHHHHHHH
Q 045073 169 FYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIG-RFIIQLGGFLLMSICMAIL 247 (402)
Q Consensus 169 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g-rr~~~~~~~~~~~~~~~~~ 247 (402)
+-....+.+.++++.|++..+.+. +.....+..+++.++.|.++||.+ +|+++.+..++.++.....
T Consensus 18 ~G~~~p~~~~~L~~~G~s~~qIG~------------l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~ 85 (400)
T PF03825_consen 18 YGAFLPYLPLYLESRGFSGTQIGI------------LLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL 85 (400)
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH
Confidence 334445678899999999998776 778888889999999999999986 4566655555544443333
Q ss_pred HHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHH
Q 045073 248 GARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVG 327 (402)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~ 327 (402)
... .+.+.+..+..+. ........|..-+++.+... .++.-.|-....+.+|-+++
T Consensus 86 ~~~---------------------~~f~~~~~~~~l~-~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~ 141 (400)
T PF03825_consen 86 AFS---------------------SSFWWLFVIMLLF-SFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVA 141 (400)
T ss_pred HHh---------------------ccHHHHHHHHHHH-HHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHH
Confidence 221 2222333322222 22223333444444444433 34455566666666666666
Q ss_pred hHhH-HhhhhccCC-cchhhHHHHHHHHHHHhhheeeeeccC
Q 045073 328 AFGV-QYYTQKGDK-QIKQSIITLAVVNFLGFLCSFMVPETN 367 (402)
Q Consensus 328 ~~~~-~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~~~~~et~ 367 (402)
.... ..+....+. +....+++.++..++.....+.+|+++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~lp~~~ 183 (400)
T PF03825_consen 142 ALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALFLPKTP 183 (400)
T ss_pred HHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 4432 222222100 222445555555544444445567654
No 233
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.37 E-value=6.9e-06 Score=76.50 Aligned_cols=137 Identities=22% Similarity=0.196 Sum_probs=103.2
Q ss_pred HHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHH
Q 045073 209 ALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFA 288 (402)
Q Consensus 209 ~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (402)
..+..++.+...|.++||+|||..+....+...+....+.+. . +++.++....+ .
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~----------------------~-~~~~~~~~l~g--~ 125 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQ----------------------G-YWFFLLLGLSG--G 125 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHH----------------------H-HHHhhhccccc--c
Confidence 355666777789999999999999988877666655555442 2 22222222222 2
Q ss_pred hhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccC
Q 045073 289 NFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETN 367 (402)
Q Consensus 289 ~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~ 367 (402)
.....+..+++.++....+.|....|+.+.....+..++|.+.+...... ++..+|.+.++..+++.+... ++||+.
T Consensus 126 ~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~--~~a~~f~ia~~~~~~~~~y~~~~l~Esl 203 (463)
T KOG2816|consen 126 FSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFL--GIALVFLIAAASGILSLLYMLLFLPESL 203 (463)
T ss_pred hhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc--CchHHHHHHHHHHHHHHHHHhhcccccc
Confidence 23445678889999999999999999999999999999999999988887 888999999999888888776 458886
Q ss_pred Ccccc
Q 045073 368 GLSLE 372 (402)
Q Consensus 368 ~~~~~ 372 (402)
.++.+
T Consensus 204 ~~~~~ 208 (463)
T KOG2816|consen 204 QEKER 208 (463)
T ss_pred Ccccc
Confidence 55544
No 234
>PRK11462 putative transporter; Provisional
Probab=98.34 E-value=1.2e-05 Score=75.89 Aligned_cols=172 Identities=21% Similarity=0.178 Sum_probs=99.8
Q ss_pred HHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhc----cchh-HHHHHHHHH
Q 045073 166 DIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDR----IGRF-IIQLGGFLL 239 (402)
Q Consensus 166 ~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr----~grr-~~~~~~~~~ 239 (402)
+..+.....|+..++.+ .|+++...+. +..+.-+...+.-++.|+++|| +||| +.++++.+.
T Consensus 22 ~~~~~~~~~~l~~fyt~~~Gl~~~~~g~------------i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~ 89 (460)
T PRK11462 22 HIIFDNVMLYMMFFYTDIFGIPAGFVGT------------MFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALP 89 (460)
T ss_pred hHHHHHHHHHHHHHHHHhhCCCHHHHHH------------HHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHH
Confidence 33444445556666544 7888886554 6777777788888899999996 5765 445556566
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCc-hHHHHHHHHHHHHHHhhCCccccccccccccc-cchhhhhhhHHH
Q 045073 240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGN-HAWFMILYGLTLFFANFGPNSTTFIVPAELFP-ARLRSTCHGISA 317 (402)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~r~~~~~~~~ 317 (402)
.+++++++..... . .. .. ..+..+.+.+...+.... .....++.+|+.+ ++.|++..++-.
T Consensus 90 ~~i~~~llf~~p~-~-s~--------------~~~~~y~~~~~~~~~~~~t~~-~ipy~al~~~lt~d~~eRt~l~s~r~ 152 (460)
T PRK11462 90 FGIVCVLAYSTPD-L-SM--------------NGKMIYAAITYTLLTLLYTVV-NIPYCALGGVITNDPTQRISLQSWRF 152 (460)
T ss_pred HHHHHHHHHhCCC-C-Cc--------------chHHHHHHHHHHHHHHHHHHH-hccHHHHHHHhcCCHHHHHHHHHHHH
Confidence 6665544332210 0 00 12 222333333332222222 2234567778876 688999999999
Q ss_pred HHHHHhHHHHhHhHHhhhhccC-----CcchhhHHHHHHHHHHHhhheee-eecc
Q 045073 318 AAGKAGAIVGAFGVQYYTQKGD-----KQIKQSIITLAVVNFLGFLCSFM-VPET 366 (402)
Q Consensus 318 ~~~~~g~~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~i~~~~-~~et 366 (402)
..+.+|..+++.+...+....+ .+|.....+++++.+++..+.+. .+|.
T Consensus 153 ~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~ 207 (460)
T PRK11462 153 VLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKER 207 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceec
Confidence 9999988888766554444332 13555555666655555544443 3553
No 235
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.24 E-value=0.00012 Score=66.33 Aligned_cols=72 Identities=10% Similarity=0.111 Sum_probs=56.1
Q ss_pred hhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHHH
Q 045073 6 AVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAAL 85 (402)
Q Consensus 6 ~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~~ 85 (402)
.+|+--..|+++-.++.+...++.-+|..++..+|..+.. .+....+..+.+......+
T Consensus 115 ~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs---------------------~~~~sy~~L~~isl~~~~~ 173 (412)
T PF01770_consen 115 YSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVS---------------------FGGVSYFQLNYISLASVSL 173 (412)
T ss_pred HHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------hcCCCHHHHHHHHHHHHHH
Confidence 4566666788888899999999999999999999998873 2456678887777666666
Q ss_pred HHHHHhhccCCch
Q 045073 86 TYYWRMKMPETAR 98 (402)
Q Consensus 86 ~~~~~~~~pesp~ 98 (402)
.+++.+++|..++
T Consensus 174 a~~~~~fLP~~~~ 186 (412)
T PF01770_consen 174 ALLIALFLPMPKR 186 (412)
T ss_pred HHHHHHHcCCCCc
Confidence 6777777887665
No 236
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.19 E-value=2.4e-05 Score=70.50 Aligned_cols=119 Identities=15% Similarity=0.066 Sum_probs=78.5
Q ss_pred HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHH-H
Q 045073 205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYG-L 283 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 283 (402)
.+.++.+..++..+.+.|+.||+|-|..++.+..+.+++..+-.+......++ ..+..+...+ .
T Consensus 84 lsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~---------------~f~~~l~~~Gq~ 148 (480)
T KOG2563|consen 84 LSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPP---------------LFRRPLTHTGQS 148 (480)
T ss_pred HHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccc---------------cchhhhhHHhHH
Confidence 77777888888888999999999999999999888888876655543211111 1111111111 1
Q ss_pred HHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhcc
Q 045073 284 TLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKG 338 (402)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~ 338 (402)
..............-+..-.||+++|+++..+..+.+.+|.+++..+.+.+....
T Consensus 149 iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 149 IAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred HHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 1111111111122234455799999999999999999999999998888777654
No 237
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.14 E-value=0.00022 Score=65.86 Aligned_cols=127 Identities=17% Similarity=0.185 Sum_probs=70.9
Q ss_pred HHHHHHHHhhhhhhhhhHHHhhhc---cchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHH
Q 045073 203 KAMFLVALFATVPGYWFTVFLIDR---IGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMI 279 (402)
Q Consensus 203 ~~~~~~~~~~~~~g~~~~g~l~dr---~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (402)
++......++.+++....+.+.+| +||++.+.++..+..+..++.........+ ..+.+.+..-+ ........
T Consensus 282 ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap--~~~t~~~~~~~--~~~~~~~~ 357 (461)
T KOG3098|consen 282 AIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAP--LRPTDSPPLLF--TPSYYLAL 357 (461)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCC--CCCCccccccc--ccchhHHH
Confidence 335566677777777777777765 678888887776665555444333221111 11111111111 11222333
Q ss_pred HHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhh
Q 045073 280 LYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYY 334 (402)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~ 334 (402)
+.....++.-.......+.++...+ ++.|..+.++.-....++..++-+..+..
T Consensus 358 ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 358 IIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 3333334434445556677778888 57788888888888777776666555443
No 238
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.12 E-value=0.00012 Score=67.64 Aligned_cols=177 Identities=19% Similarity=0.161 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhc----cchh-
Q 045073 157 GTTSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDR----IGRF- 230 (402)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr----~grr- 230 (402)
...+.-+..+..+.....|+..++.+ .|+++..++. +..+.=+.-.+.-++.|.++|| +||+
T Consensus 16 ~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~------------iflv~RiiDAi~DP~~G~i~D~t~~r~GrfR 83 (467)
T COG2211 16 GYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGT------------IFLVARIIDAITDPIMGFIVDRTRSRWGRFR 83 (467)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHH------------HHHHHHHHHHHhcchheeeeccccccccccc
Confidence 33444444555555666677777765 8888886555 6777777788888899999997 5554
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccc-cchh
Q 045073 231 IIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFP-ARLR 309 (402)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~r 309 (402)
+.++++.+..++...++..... .... .......+.+.+...++..... ...++.+|+.+ +++|
T Consensus 84 P~lL~g~ip~~i~~~l~F~~p~-~~~~--------------~k~~ya~vtY~l~~l~YT~vni-Py~al~~~iT~d~~ER 147 (467)
T COG2211 84 PWLLWGAIPFAIVAVLLFITPD-FSMT--------------GKLIYALVTYMLLGLGYTLVNI-PYGALGPEITQDPQER 147 (467)
T ss_pred HHHHHHhHHHHHHHHHHHcCCC-cccC--------------cchHHHHHHHHHHHHHHHheeC-chhhcchhhcCCHHHH
Confidence 5555565555554444333211 0000 2222333333333333333322 34456677764 5789
Q ss_pred hhhhhHHHHHHHHhHHHHhHhHHhhhhccCC-----cchhhHHHHHHHHHHHhhhee
Q 045073 310 STCHGISAAAGKAGAIVGAFGVQYYTQKGDK-----QIKQSIITLAVVNFLGFLCSF 361 (402)
Q Consensus 310 ~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~i~~~ 361 (402)
....+.-..+..+|..+...+.+.+....+. +++...++++++..+..++++
T Consensus 148 ~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~ 204 (467)
T COG2211 148 ASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCF 204 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988888888777665543 444444455555444444444
No 239
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.12 E-value=0.00012 Score=64.42 Aligned_cols=158 Identities=16% Similarity=0.057 Sum_probs=113.2
Q ss_pred HHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHH
Q 045073 167 IAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAI 246 (402)
Q Consensus 167 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 246 (402)
....+....++.+-++.|.|.+.++. +..+..++.-..+++..++.+|+|.++.+..++++.+++.++
T Consensus 26 ~~itsvgPLL~~Ir~~~gls~s~aGl------------LTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~i 93 (395)
T COG2807 26 PAITSVGPLLDEIRQDLGLSFSVAGL------------LTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILI 93 (395)
T ss_pred hhhhhhhhhHHHHHHHhcccHHHHHH------------HHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 44555566677888889999887766 777778888888889999999999999999888777776655
Q ss_pred HHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHH
Q 045073 247 LGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIV 326 (402)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i 326 (402)
=... +....+....+. +.+....+......+-+.||++. +..+|++.....+++.+
T Consensus 94 R~~~----------------------~~~~L~~gt~l~-G~gIav~nVLLPslIK~~Fpk~~-~~mtglYs~sl~~~aaL 149 (395)
T COG2807 94 RSLG----------------------GLPLLFLGTLLA-GAGIAVINVLLPSLIKRDFPKRV-GLMTGLYSTSLGAGAAL 149 (395)
T ss_pred Hhcc----------------------cHHHHHHHHHHH-HhhHHHHHHhhhHHHHhhcccch-hhHHhHHHHHHHHHHHH
Confidence 4442 111222211111 11111122345566788888665 88999999999999999
Q ss_pred HhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee
Q 045073 327 GAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF 361 (402)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~ 361 (402)
++.+...+.++.+ +|+....+.+..++++++..+
T Consensus 150 aa~lavpla~~~~-gW~~aL~~WAl~allAl~~Wl 183 (395)
T COG2807 150 AAALAVPLAQHSG-GWRGALGFWALLALLALLIWL 183 (395)
T ss_pred HhhhhhHHHHhhc-cHHHHHHHHHHHHHHHHHHHh
Confidence 9988888777663 799998888888888876655
No 240
>PRK09848 glucuronide transporter; Provisional
Probab=98.09 E-value=8.4e-05 Score=70.22 Aligned_cols=68 Identities=24% Similarity=0.210 Sum_probs=44.9
Q ss_pred HHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhcc----chhHHH-HHHHH
Q 045073 165 LDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRI----GRFIIQ-LGGFL 238 (402)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~----grr~~~-~~~~~ 238 (402)
..........|++.|+++ .|++....+. ...+..+...+..++.|+++||. |||+.. +.+.+
T Consensus 20 ~~~~~~~~~~~l~~y~~~~~gl~~~~~g~------------~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~ 87 (448)
T PRK09848 20 NNFAFAMGALFLLSYYTDVAGVGAAAAGT------------MLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTA 87 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHH
Confidence 334444444455556655 6898887665 77788888889999999999996 666644 44544
Q ss_pred HHHHHH
Q 045073 239 LMSICM 244 (402)
Q Consensus 239 ~~~~~~ 244 (402)
...+..
T Consensus 88 ~~~~~~ 93 (448)
T PRK09848 88 PLMIFS 93 (448)
T ss_pred HHHHHH
Confidence 444333
No 241
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.09 E-value=7.6e-05 Score=72.85 Aligned_cols=135 Identities=15% Similarity=0.091 Sum_probs=85.6
Q ss_pred hhhhhhhHHHhhhc-cchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhC
Q 045073 213 TVPGYWFTVFLIDR-IGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFG 291 (402)
Q Consensus 213 ~~~g~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (402)
.-+..+++|+++|+ +||++.+..+.++..++..++.+........ ........+...+...+..+
T Consensus 36 ~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~--------------~~~~~~~l~gLaLia~G~Gg 101 (654)
T TIGR00926 36 CYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGH--------------PLHDLLDLLGLALIALGTGG 101 (654)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCccccc--------------chHHHHHHHHHHHHHhhccc
Confidence 33445578899996 6999999998888888777766532100000 11111111122222233344
Q ss_pred Cccccccccccccccc---hhhhhhhHHHHHHHHhHHHHhHhHHhhhhccC-----CcchhhHHHHHHHHHHHhhhee
Q 045073 292 PNSTTFIVPAELFPAR---LRSTCHGISAAAGKAGAIVGAFGVQYYTQKGD-----KQIKQSIITLAVVNFLGFLCSF 361 (402)
Q Consensus 292 ~~~~~~~~~~e~~p~~---~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~i~~~ 361 (402)
.-+...+...|.++++ .|.....+.....++|+++++.+.+++.+..+ .+|...|.+.+++.++++++..
T Consensus 102 iKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 102 IKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFM 179 (654)
T ss_pred cccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHH
Confidence 4566667778887643 46778888888899999999988888864321 1577888888888777766654
No 242
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.01 E-value=0.0006 Score=62.97 Aligned_cols=132 Identities=12% Similarity=0.118 Sum_probs=84.1
Q ss_pred HHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 045073 171 TINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGAR 250 (402)
Q Consensus 171 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~ 250 (402)
++...+..|+...|+++...+. .-....+.++.|.++..++.+|+|..+.-+++......+..+....
T Consensus 276 sf~~lmt~yl~~~G~s~~~igi------------~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~ 343 (432)
T PF06963_consen 276 SFGGLMTAYLKSQGYSPSVIGI------------FRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVS 343 (432)
T ss_pred cCcHHHHHHHHHCCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHH
Confidence 3444556677777999887555 6677788888999999999999998888888877766655544433
Q ss_pred hhcccCCCCCCCCCCCccccCC-chHHHHHHH--HHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHH
Q 045073 251 YDSLRGKKCDPKKDPLHEYCDG-NHAWFMILY--GLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVG 327 (402)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~ 327 (402)
.. .... + .......++ .+..=.+-.+.--...-+..|..|++.||+..|+-+..+++...+.
T Consensus 344 ~~-~~~~--------------~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~ 408 (432)
T PF06963_consen 344 FW-APGS--------------PFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLS 408 (432)
T ss_pred Hh-cCCC--------------CchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHH
Confidence 32 2211 1 111111111 1111112223333344567899999999999999998888766655
Q ss_pred hH
Q 045073 328 AF 329 (402)
Q Consensus 328 ~~ 329 (402)
-.
T Consensus 409 ~~ 410 (432)
T PF06963_consen 409 FV 410 (432)
T ss_pred HH
Confidence 43
No 243
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.98 E-value=7.2e-05 Score=65.04 Aligned_cols=289 Identities=10% Similarity=0.029 Sum_probs=141.0
Q ss_pred hhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHHH
Q 045073 6 AVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAAL 85 (402)
Q Consensus 6 ~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~~ 85 (402)
++|+-+..+|+++.++.+...+..-.|...|..++..+.+ .+..+.+..-.+......+
T Consensus 116 ysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs---------------------~~~~sy~~LN~ISL~~~~i 174 (433)
T KOG3810|consen 116 YSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVS---------------------LETLSYTTLNYISLAEVTI 174 (433)
T ss_pred hheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhh---------------------hcccchhhhchhhHHHHHH
Confidence 5677788899999999999999999999999999988872 2445555555665555555
Q ss_pred HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCcc----ccccchhhhhh-hhhHHHHHHHH
Q 045073 86 TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEAS----TYGLFSKEFVQ-KHGLHLLGTTS 160 (402)
Q Consensus 86 ~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~ 160 (402)
..+...++|..+|-+..+++.++.... +.++... +.+... ....++..+.. -..+.++.-.+
T Consensus 175 a~~~A~fLP~v~rSl~f~~~~~~~~v~------------~~e~~~~-~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSl 241 (433)
T KOG3810|consen 175 AVLLALFLPRVKRSLYFHRLEDKISVG------------DLEEMNP-QASYMSYLRGAFVLLWRDLQECYSNPRLLKWSL 241 (433)
T ss_pred HHHHHhhCCCCchhhhhhcccccceec------------cchhcCc-cchhhHHHHHHHHHHHHHHHHHhcCchhhhhHH
Confidence 666666777666543332222211100 0111111 010011 01111111110 00113333344
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073 161 TWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240 (402)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~ 240 (402)
.+.....++|-...|...+-++.. +..... ..+..-.+..+.+.++.+..|++.-.+.|..-++.+....
T Consensus 242 WwAl~scg~~QV~nY~Q~LW~~~~-~~~~~v---------yNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~ 311 (433)
T KOG3810|consen 242 WWALASCGYYQVTNYTQILWKEVA-PNPANV---------YNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSA 311 (433)
T ss_pred HHHHhhchhHHHHHHHHHHHHhhC-CCchhh---------hcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHH
Confidence 444455566666655555544443 211111 2222444555666677778888876666653333332211
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG 320 (402)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~ 320 (402)
..+..++.... . .+.+.....+.++........ ++...-+++....+.-|...|+..++.
T Consensus 312 ~~agllf~m~~-----t--------------~~Iw~~Ya~yvlfr~~y~l~i-tiA~~~iA~nL~~e~~gLvFGiNTFvA 371 (433)
T KOG3810|consen 312 VQAGLLFIMAQ-----T--------------QHIWVCYAGYVLFRVIYQLTI-TIATFQIARNLSSELFGLVFGINTFVA 371 (433)
T ss_pred Hhhhhhhhhhc-----c--------------cceehhhhhHHHHHhhHhhhh-hHHHHHHHHhhhhhhheeeeehHHHHH
Confidence 11211111111 1 233333333333333222222 223233345556666688888877665
Q ss_pred HHhHHHHhHhHHhhhhccCC---------cchhhHHHHHHHHHHHhhhee
Q 045073 321 KAGAIVGAFGVQYYTQKGDK---------QIKQSIITLAVVNFLGFLCSF 361 (402)
Q Consensus 321 ~~g~~i~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~i~~i~~~ 361 (402)
-+-..+-..+ ..|..+. -+..-|.+.+++.++++.+.+
T Consensus 372 l~lQsilT~i---Vvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~ 418 (433)
T KOG3810|consen 372 LILQSILTLI---VVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEY 418 (433)
T ss_pred HHHHHhheEE---EEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHH
Confidence 5544443332 2221110 233457777777777766543
No 244
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.92 E-value=8e-05 Score=50.69 Aligned_cols=65 Identities=15% Similarity=0.113 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHH
Q 045073 162 WFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFL 238 (402)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~ 238 (402)
++...........|.|.++++.|+++.+.+. +..+..+..+++.++.|.++||+++++..+....
T Consensus 9 yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGi------------l~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~ 73 (77)
T PF12832_consen 9 YFFYFAALGCLYPFLPLYLKQLGLSPSQIGI------------LSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSL 73 (77)
T ss_pred HHHHHHHHHHHHhhhhHhhhhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHH
Confidence 3334445556677889999999999998776 7788888899999999999999999988776543
No 245
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.79 E-value=7.1e-05 Score=57.78 Aligned_cols=70 Identities=19% Similarity=0.287 Sum_probs=56.3
Q ss_pred CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073 3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP 82 (402)
Q Consensus 3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~ 82 (402)
+....++.|..|+++|++..++.+....+|..+++.+++.+. +..+|++.+++.++.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~ 126 (141)
T TIGR00880 70 VAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLA-----------------------QFLGWRAPFLFLAIL 126 (141)
T ss_pred HhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHh-----------------------cccchHHHHHHHHHH
Confidence 345678899999999999999999999999999999998886 557899999887666
Q ss_pred HHHHHHHH-hhccC
Q 045073 83 AALTYYWR-MKMPE 95 (402)
Q Consensus 83 ~~~~~~~~-~~~pe 95 (402)
.++..+.. ++.||
T Consensus 127 ~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 127 ALAAFILLAFLLPE 140 (141)
T ss_pred HHHHHHHHhhcCCC
Confidence 66554443 34555
No 246
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.78 E-value=3.2e-06 Score=80.71 Aligned_cols=180 Identities=11% Similarity=0.031 Sum_probs=1.0
Q ss_pred hhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcc
Q 045073 175 AQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSL 254 (402)
Q Consensus 175 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~ 254 (402)
.+..+-+++++++++.+. +.+..-++.++..++..++.+|..|-+.+-++.++++++.++++++....
T Consensus 25 ~lttiErRF~l~S~~~G~------------i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~ 92 (539)
T PF03137_consen 25 SLTTIERRFGLSSSQSGL------------ISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLS 92 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhc
Confidence 345666779999998776 77888888888888888898887777888889999999999988876543
Q ss_pred cCCCCCCC---------CCCCc----------------cccCCchHHHHHHHH---HHHHHHhhCCcccccccccccccc
Q 045073 255 RGKKCDPK---------KDPLH----------------EYCDGNHAWFMILYG---LTLFFANFGPNSTTFIVPAELFPA 306 (402)
Q Consensus 255 ~~~~~~~~---------~~~~~----------------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~e~~p~ 306 (402)
...+.... +..+- .-.+........++. ++.+.+....+++..+|+=|..++
T Consensus 93 ~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~ 172 (539)
T PF03137_consen 93 GPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSK 172 (539)
T ss_dssp -----------------------------------------------------------SSS------------------
T ss_pred CCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccccc
Confidence 32211100 00000 000111111222222 223333344556778889999999
Q ss_pred chhhhhhhHHHHHHHHhHHHHhHhHHhhhhccC----------------C----cchhhHHHHHHHHHHHhhheeeeecc
Q 045073 307 RLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGD----------------K----QIKQSIITLAVVNFLGFLCSFMVPET 366 (402)
Q Consensus 307 ~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~----------------~----~~~~~~~~~~~~~~i~~i~~~~~~et 366 (402)
+.-+...|+......+|.++|-.+.+.....+. . .|+.-|++.+++.++..+..+++|+.
T Consensus 173 ~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~ 252 (539)
T PF03137_consen 173 KNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKK 252 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 988888898888888888777666655443210 0 35566677777776666666666654
No 247
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.71 E-value=0.0013 Score=62.15 Aligned_cols=144 Identities=16% Similarity=0.073 Sum_probs=85.2
Q ss_pred HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHH-HHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHH
Q 045073 205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSI-CMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGL 283 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (402)
...+..+...+..++.|-++|+-++||.++..+...++ +.+.+.+. .+ ..++...+++.+
T Consensus 75 ~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v-----~~--------------~~~~~~~~l~ii 135 (477)
T PF11700_consen 75 ANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFV-----SP--------------GQWWLALVLFII 135 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHh-----Cc--------------chHHHHHHHHHH
Confidence 45556666667777889999999887776655544433 33333332 11 223333333333
Q ss_pred HHHHHhhCCccccccccccccccchh--------------------------hhhhhHHHHHHHHhHHHHhHhHHhhhhc
Q 045073 284 TLFFANFGPNSTTFIVPAELFPARLR--------------------------STCHGISAAAGKAGAIVGAFGVQYYTQK 337 (402)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~e~~p~~~r--------------------------~~~~~~~~~~~~~g~~i~~~~~~~~~~~ 337 (402)
...+...+ .....++..|+.+++.+ ++..+.....+++|+.+.-.+.-.+...
T Consensus 136 a~v~~~~~-~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~ 214 (477)
T PF11700_consen 136 ANVGYEAS-NVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVIS 214 (477)
T ss_pred HHHHHHHH-HHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 33332222 23466778888888777 8999999999999988776554443322
Q ss_pred cCC------cchhhHHHHHHHHHHHhhh-eeeeeccCC
Q 045073 338 GDK------QIKQSIITLAVVNFLGFLC-SFMVPETNG 368 (402)
Q Consensus 338 ~~~------~~~~~~~~~~~~~~i~~i~-~~~~~et~~ 368 (402)
.+. ..+..+.+.++..++..+. .+++|+.++
T Consensus 215 ~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 215 PGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPG 252 (477)
T ss_pred CCCccccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 211 3466777777766554444 445576654
No 248
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.57 E-value=0.00089 Score=60.30 Aligned_cols=115 Identities=19% Similarity=0.053 Sum_probs=71.4
Q ss_pred hhhhhHHHhhhccc-----hhHHHH-HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHH---HHH
Q 045073 215 PGYWFTVFLIDRIG-----RFIIQL-GGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYG---LTL 285 (402)
Q Consensus 215 ~g~~~~g~l~dr~g-----rr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 285 (402)
+.....|+.+|+.+ ||..++ .+...+..+..+.............+.+ .+.+....... ...
T Consensus 29 p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~---------~~~~~g~~~a~l~F~l~ 99 (403)
T PF03209_consen 29 PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSS---------GPFWLGLALAALAFLLY 99 (403)
T ss_pred HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccc---------cccHHHHHHHHHHHHHH
Confidence 45778999999988 775544 4455555544444444333322100000 12222211111 122
Q ss_pred HHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhcc
Q 045073 286 FFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKG 338 (402)
Q Consensus 286 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~ 338 (402)
+.+.........++++|..|++.|+++.++.....-+|.+++..+.+.+.+.+
T Consensus 100 G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~ 152 (403)
T PF03209_consen 100 GLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPF 152 (403)
T ss_pred HhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 22222334456778999999999999999999999999999999999888865
No 249
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.57 E-value=0.0066 Score=55.28 Aligned_cols=58 Identities=12% Similarity=0.040 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhh
Q 045073 277 FMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYY 334 (402)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~ 334 (402)
.+.+..+..+..++......+..+.|..|++.|..++|.....-.+|..++..+.-.+
T Consensus 337 ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 337 IVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3333333333333333344556667778999999999999988888888777655444
No 250
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.56 E-value=0.0039 Score=56.81 Aligned_cols=128 Identities=13% Similarity=0.021 Sum_probs=81.3
Q ss_pred hhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccc
Q 045073 217 YWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTT 296 (402)
Q Consensus 217 ~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (402)
.+....+.|.+|-|++++.+.+...+...++.+. .....+-+.-++.+..... -...
T Consensus 58 l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~----------------------~sv~~mq~~q~~yg~~~a~-evay 114 (412)
T PF01770_consen 58 LLPVFLLTDYLRYKPVIILQALSYIITWLLLLFG----------------------TSVLAMQLMQFFYGLATAA-EVAY 114 (412)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH----------------------CcHHHHHHHHHHHHHHHHH-HHHH
Confidence 3466788999999999999877766666655552 2223333333333322222 2234
Q ss_pred ccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccC
Q 045073 297 FIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETN 367 (402)
Q Consensus 297 ~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~ 367 (402)
++|+=-..|++.--++.+.+.....+|.+++..+...+......++.....+......+++++.+++|..+
T Consensus 115 ~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~ 185 (412)
T PF01770_consen 115 YSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPK 185 (412)
T ss_pred HHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 45555556777667778888888888888888877777664322555666666666677777777776543
No 251
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.53 E-value=0.0029 Score=53.31 Aligned_cols=57 Identities=11% Similarity=0.050 Sum_probs=35.7
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHHHHHHHH
Q 045073 16 RTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAALTYYWR 90 (402)
Q Consensus 16 ~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~~~~~~~ 90 (402)
|+|+..+.+...+.++|.++....-..-.... ......|++++.+.++..++-++..
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~------------------~~~~~~W~~I~si~~lL~~IpLIly 58 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVV------------------IALTNNWQWILSIFILLIFIPLILY 58 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHH------------------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67888888888889999888765432110000 1123459999988776665544443
No 252
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.47 E-value=0.00074 Score=65.52 Aligned_cols=183 Identities=11% Similarity=-0.006 Sum_probs=113.6
Q ss_pred hhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccC
Q 045073 177 KDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRG 256 (402)
Q Consensus 177 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (402)
..+-+.+++++++.+. +...+-++..+...+..+..-|.-|-+.+-++.++++++.++.+++......
T Consensus 121 ttiErRF~i~Ss~sG~------------I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~ 188 (735)
T KOG3626|consen 121 TTIERRFKISSSQSGL------------IASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGP 188 (735)
T ss_pred hhhhhhcCCCCCccee------------EeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCc
Confidence 3444568888887665 5566666677766777888888888888889999999999988887543322
Q ss_pred CCCC------CCCCC------------------CccccC---Cch---HHHHHHHHHHHHHHhhCCcccccccccccccc
Q 045073 257 KKCD------PKKDP------------------LHEYCD---GNH---AWFMILYGLTLFFANFGPNSTTFIVPAELFPA 306 (402)
Q Consensus 257 ~~~~------~~~~~------------------~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 306 (402)
.+.+ ..+.| ..+.+. ... +.++.+..++.+.+....++.-.+|+=|...+
T Consensus 189 y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~ 268 (735)
T KOG3626|consen 189 YEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKK 268 (735)
T ss_pred chhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccc
Confidence 1110 01111 011111 111 11222222333333344556667777787777
Q ss_pred chhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCC-----------------cchhhHHHHHHHHHHHhhheeeeeccCCc
Q 045073 307 RLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDK-----------------QIKQSIITLAVVNFLGFLCSFMVPETNGL 369 (402)
Q Consensus 307 ~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~i~~i~~~~~~et~~~ 369 (402)
+.-....|+...+..+|-++|-++.+.....+.+ .|+.-|++.+.+.++..+..+++|++.++
T Consensus 269 ~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~ 348 (735)
T KOG3626|consen 269 KNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPK 348 (735)
T ss_pred cCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCcc
Confidence 7777888888888888777777666665432210 45667778888888888888888776555
Q ss_pred cc
Q 045073 370 SL 371 (402)
Q Consensus 370 ~~ 371 (402)
+.
T Consensus 349 ~~ 350 (735)
T KOG3626|consen 349 SQ 350 (735)
T ss_pred cc
Confidence 43
No 253
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.38 E-value=0.002 Score=60.28 Aligned_cols=155 Identities=14% Similarity=0.081 Sum_probs=87.9
Q ss_pred hhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhcc-----chhHHHHHHHHHHHHHHHHHHHHh
Q 045073 177 KDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRI-----GRFIIQLGGFLLMSICMAILGARY 251 (402)
Q Consensus 177 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-----grr~~~~~~~~~~~~~~~~~~~~~ 251 (402)
+.+.+++|.++.+.+. ......+ --...++.|.++|-+ .||+.++++.++..++.+.++...
T Consensus 14 ~~l~~~l~ls~~~~~~------------~~~~~~l-Pw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~ 80 (433)
T PF03092_consen 14 PFLKDDLGLSPAQLQR------------LSSLASL-PWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLP 80 (433)
T ss_pred HHHHHHcCCCHHHHHH------------HHHHHhC-chHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcc
Confidence 4455678999887443 2221111 112345789999986 355666666655544444444321
Q ss_pred hcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccccccccc---ccchhhhhhhHHHHHHHHhHHHHh
Q 045073 252 DSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELF---PARLRSTCHGISAAAGKAGAIVGA 328 (402)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~---p~~~r~~~~~~~~~~~~~g~~i~~ 328 (402)
. . ..+.....++.....++....-...-++..|.. |.+ |+...+.......+|++++.
T Consensus 81 ~----~--------------~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~ 141 (433)
T PF03092_consen 81 A----S--------------ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGS 141 (433)
T ss_pred c----c--------------cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHH
Confidence 1 0 011111111111111111111123334445553 545 78888888889999999999
Q ss_pred HhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee-ec
Q 045073 329 FGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV-PE 365 (402)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~e 365 (402)
.+.|.+.+.. +++..|.+.+++..+..+..+++ +|
T Consensus 142 ~l~G~l~~~~--~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 142 LLSGPLLDSF--GPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred HhhhhhhhcC--CCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 9999998877 77788888877777666555554 55
No 254
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.35 E-value=0.012 Score=55.29 Aligned_cols=119 Identities=8% Similarity=0.026 Sum_probs=70.9
Q ss_pred hhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCC-C----CCCCCCCCc-cccC----CchHHHHHHHHHHHH
Q 045073 217 YWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGK-K----CDPKKDPLH-EYCD----GNHAWFMILYGLTLF 286 (402)
Q Consensus 217 ~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~ 286 (402)
.++.+++++|++|++++-.........+.++++......+. + .+.....+. +... -..|.....+...-.
T Consensus 61 ~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~el 140 (472)
T TIGR00769 61 MLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAEL 140 (472)
T ss_pred HHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHH
Confidence 55789999999999988877666666666655553321111 0 000000000 0000 001122222222222
Q ss_pred HHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhh
Q 045073 287 FANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYT 335 (402)
Q Consensus 287 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~ 335 (402)
.......-..|..++|.+..++-.+-.++....+++|.++++.+..++.
T Consensus 141 w~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 141 WGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222268899999999999999999999999999999998877765
No 255
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.34 E-value=0.14 Score=48.12 Aligned_cols=40 Identities=15% Similarity=0.109 Sum_probs=35.9
Q ss_pred hhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045073 6 AVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSG 45 (402)
Q Consensus 6 ~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~ 45 (402)
..++.|.++.++-.|..++...+.++|.++++.+...+.+
T Consensus 151 W~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 151 WGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999988887764
No 256
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.28 E-value=0.007 Score=47.48 Aligned_cols=107 Identities=13% Similarity=0.006 Sum_probs=69.3
Q ss_pred HHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHH
Q 045073 206 FLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTL 285 (402)
Q Consensus 206 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (402)
..+......+++++.+.+.+++|.|+.++++.+...+-...... .+. ..++....+.
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~----------------------~~~-~~l~~~s~l~ 99 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFY----------------------PNS-YTLYPASALL 99 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh----------------------hhH-HHHHHHHHHH
Confidence 33444455566678889999999999999886655543332222 222 3333333333
Q ss_pred HHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhh
Q 045073 286 FFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYT 335 (402)
Q Consensus 286 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~ 335 (402)
+++....+...-.++.+...++.|++-.++.-.+...+.++|....-.+.
T Consensus 100 G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 100 GFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred hhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44333444455567788888899999999988888888888876554443
No 257
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.18 E-value=0.0044 Score=42.64 Aligned_cols=72 Identities=13% Similarity=0.087 Sum_probs=61.2
Q ss_pred HHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHH
Q 045073 167 IAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAI 246 (402)
Q Consensus 167 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 246 (402)
++-+..+..+|.+.++.+++..+.+. +.+.+.++.++|.+...++.++.++++.+..+.+...++.+.
T Consensus 6 igRFayTplLP~M~~~~~ls~~~ag~------------lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 73 (85)
T PF06779_consen 6 IGRFAYTPLLPLMQADGGLSLSQAGW------------LASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAA 73 (85)
T ss_pred hHHHHHHhHhHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 44556667889999999999998776 889999999999999999999988888899888888888777
Q ss_pred HHHH
Q 045073 247 LGAR 250 (402)
Q Consensus 247 ~~~~ 250 (402)
+++.
T Consensus 74 ma~~ 77 (85)
T PF06779_consen 74 MALT 77 (85)
T ss_pred HHHH
Confidence 7764
No 258
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.04 E-value=0.022 Score=50.07 Aligned_cols=129 Identities=17% Similarity=0.162 Sum_probs=75.3
Q ss_pred HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073 205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT 284 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (402)
......+...++.++.|.+.||+|||+.+..+.....++.+...+.. .............
T Consensus 44 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~ 103 (338)
T COG0477 44 LLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAP--------------------NVGLALLLILRLL 103 (338)
T ss_pred HHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCc--------------------cchHHHHHHHHHH
Confidence 45555566666668999999999999777766654333322222211 1011222222222
Q ss_pred HHHHhhCCcccccccccccccc-chhhhhhhHHHH-HHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHH
Q 045073 285 LFFANFGPNSTTFIVPAELFPA-RLRSTCHGISAA-AGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVN 353 (402)
Q Consensus 285 ~~~~~~~~~~~~~~~~~e~~p~-~~r~~~~~~~~~-~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (402)
.+.......+...++..|.+|. +.|+...+.... ...++..+++.+.+.+......+|+..+.+.....
T Consensus 104 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 104 QGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 2332334455677788999887 678888888777 46677778876665555431116666555544444
No 259
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.78 E-value=0.066 Score=49.73 Aligned_cols=142 Identities=11% Similarity=0.044 Sum_probs=76.2
Q ss_pred HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHH----HHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHH
Q 045073 205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICM----AILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMIL 280 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (402)
....-.+..++.+...|..+||..|.+....+.+..-++. .++.......... . .+.+....+
T Consensus 43 ygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~----~---------~~~~~~~~l 109 (432)
T PF06963_consen 43 YGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSS----S---------QSSWLFIAL 109 (432)
T ss_pred HHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccc----c---------ccchHHHHH
Confidence 4555566667777788999999999888776655543332 2222222111110 0 011111111
Q ss_pred HH---HHHHHHhhCCccccccccccc----c--ccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHH
Q 045073 281 YG---LTLFFANFGPNSTTFIVPAEL----F--PARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAV 351 (402)
Q Consensus 281 ~~---~~~~~~~~~~~~~~~~~~~e~----~--p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (402)
+. ........+......+.--|. . .+..+....+...-+-.+..+++|++.|.+.+.. +......+.++
T Consensus 110 ~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~--s~~~~~~~i~~ 187 (432)
T PF06963_consen 110 FALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFA--SPVIAAIFIAG 187 (432)
T ss_pred HHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--CHHHHHHHHHH
Confidence 11 111111111111111211222 2 3344455555555555678999999999998866 77777777888
Q ss_pred HHHHHhhhee
Q 045073 352 VNFLGFLCSF 361 (402)
Q Consensus 352 ~~~i~~i~~~ 361 (402)
.++++.+.=+
T Consensus 188 ~N~~S~~vEy 197 (432)
T PF06963_consen 188 WNLASVFVEY 197 (432)
T ss_pred HHHHHHHHHH
Confidence 8888776644
No 260
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.71 E-value=0.22 Score=46.71 Aligned_cols=38 Identities=13% Similarity=0.074 Sum_probs=28.8
Q ss_pred cccccccccccccchhhhhhhHHHHHHHHhHHHHhHhH
Q 045073 294 STTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGV 331 (402)
Q Consensus 294 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~ 331 (402)
+..+.+..+..+++.|..+..+...+-.+|-.+|+.+.
T Consensus 391 s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 391 SLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556677778889999888888888777777777553
No 261
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.66 E-value=0.0013 Score=59.75 Aligned_cols=37 Identities=5% Similarity=0.112 Sum_probs=29.8
Q ss_pred chhhhhhccCcccchh-HHHHHHHHHHHHHHHHHHHHH
Q 045073 5 SAVIMSEYANKRTRGA-FIAAVFAMQGMGILFAGVISL 41 (402)
Q Consensus 5 ~~~~i~e~~~~~~Rg~-~~~~~~~~~~lG~~~~~~~~~ 41 (402)
+-++++|.+.+++|.+ +++.+..+.++|..+|..++.
T Consensus 163 ~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 163 CRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred HHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 3578888887766666 999999999999988888775
No 262
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=96.65 E-value=0.055 Score=50.26 Aligned_cols=42 Identities=10% Similarity=0.025 Sum_probs=32.4
Q ss_pred cccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhc
Q 045073 296 TFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQK 337 (402)
Q Consensus 296 ~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~ 337 (402)
..+.-+.+..|..-|+-+.+.|+..++|+-.-..+.-++.|.
T Consensus 426 i~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 426 IMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred HHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence 444557788889999999999999999987766665555553
No 263
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=96.37 E-value=0.0016 Score=55.39 Aligned_cols=115 Identities=15% Similarity=0.148 Sum_probs=68.7
Q ss_pred HHHHHHhhhhhhhhhHHHhhhc-cchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHH
Q 045073 205 MFLVALFATVPGYWFTVFLIDR-IGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGL 283 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (402)
+.+++.--.++-++++|++.|| +|-|...++-.....++-++++.-.. .+..+.+..-.+
T Consensus 84 lYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi-------------------~~aFw~M~~GRF 144 (459)
T KOG4686|consen 84 LYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGI-------------------SHAFWTMLAGRF 144 (459)
T ss_pred eeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchH-------------------HHHHHHHHhhhe
Confidence 4555666667777899999997 46665444433333444444333111 112222222222
Q ss_pred HHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhcc
Q 045073 284 TLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKG 338 (402)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~ 338 (402)
.++.++-........|+.-.|..+.-+.++|+.....++|+.+--.+.+++.+..
T Consensus 145 ~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~ 199 (459)
T KOG4686|consen 145 LFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTM 199 (459)
T ss_pred eeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHH
Confidence 2222222222245567777888889999999999999999988777777777654
No 264
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=96.31 E-value=0.008 Score=53.67 Aligned_cols=78 Identities=14% Similarity=0.015 Sum_probs=56.1
Q ss_pred hhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccC--------------CcchhhHHHHHHHHH
Q 045073 289 NFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGD--------------KQIKQSIITLAVVNF 354 (402)
Q Consensus 289 ~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~ 354 (402)
.....+....+++++.|++.+++..++...++.+|.+++|.+.+.+..... ..|+.++++.+++.+
T Consensus 24 ~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~yl~ia~~~~ 103 (310)
T TIGR01272 24 LTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAKVHTPYLLLAGALA 103 (310)
T ss_pred HHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 344556778889999999999999999999999999999999987763210 156778886666554
Q ss_pred HHhhheeee--ecc
Q 045073 355 LGFLCSFMV--PET 366 (402)
Q Consensus 355 i~~i~~~~~--~et 366 (402)
+..+...+. ||.
T Consensus 104 ~~~i~~~~~~~p~~ 117 (310)
T TIGR01272 104 VLAIIFAFLPLPEL 117 (310)
T ss_pred HHHHHHHHccCCCC
Confidence 444443333 554
No 265
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=96.07 E-value=1.4 Score=41.92 Aligned_cols=40 Identities=18% Similarity=0.247 Sum_probs=35.2
Q ss_pred hhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045073 6 AVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSG 45 (402)
Q Consensus 6 ~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~ 45 (402)
..+..|.++.++-.|..+++..+.++|.++++.+...+.+
T Consensus 166 W~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 166 WGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999888888775
No 266
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.06 E-value=0.03 Score=51.27 Aligned_cols=156 Identities=16% Similarity=0.118 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhc----cch
Q 045073 154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDR----IGR 229 (402)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr----~gr 229 (402)
.++......+...+++-.-..|.+.+.+.+|......+. .-...-+..++...+.|..+|| +||
T Consensus 33 ~li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~------------iw~~gPi~G~~vQP~vG~~SDrc~sr~GR 100 (498)
T KOG0637|consen 33 KLISVASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSI------------IWLCGPLSGLLVQPLVGSASDRCTSRYGR 100 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHHcCCCcccccc------------cccccccccceeccccccccccccccccc
Confidence 455555555555566666777888899999988775333 3444445566667788999996 676
Q ss_pred hHH-HHHHHHHHHHHHHHHHHHhhc---ccCCCCCCCCCCCccccCCchHHHHHHHHHHH---HHHhhCCcccccccccc
Q 045073 230 FII-QLGGFLLMSICMAILGARYDS---LRGKKCDPKKDPLHEYCDGNHAWFMILYGLTL---FFANFGPNSTTFIVPAE 302 (402)
Q Consensus 230 r~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~e 302 (402)
|+. +..+.....++.+++....-. ..+.+.. ......+.+..+.. =+........+-++..|
T Consensus 101 RRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~-----------~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~D 169 (498)
T KOG0637|consen 101 RRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERK-----------PVKPRAIVLFILGFWLLDVANNTLQGPCRALLAD 169 (498)
T ss_pred ccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCccc-----------ccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHH
Confidence 655 444555555665555543211 1111000 01111122211111 12222334456678888
Q ss_pred ccccchhhh-hhhHHHHHHHHhHHHHhHhHH
Q 045073 303 LFPARLRST-CHGISAAAGKAGAIVGAFGVQ 332 (402)
Q Consensus 303 ~~p~~~r~~-~~~~~~~~~~~g~~i~~~~~~ 332 (402)
+.-.+.+.+ +.+....+..+|+.+|-.+.+
T Consensus 170 l~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 170 LARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred hccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 887766666 899998888888888776655
No 267
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=95.87 E-value=0.0018 Score=57.72 Aligned_cols=39 Identities=8% Similarity=0.072 Sum_probs=2.5
Q ss_pred CccccccccccccccchhhhhhhHHHHHHHHhHHHHhHh
Q 045073 292 PNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFG 330 (402)
Q Consensus 292 ~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~ 330 (402)
..+..+.+..+..+++.|..+..+...+-.+|-.+|..+
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp --HHHH---------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444667777888888888888777777777776666644
No 268
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=95.86 E-value=0.44 Score=43.49 Aligned_cols=49 Identities=10% Similarity=-0.008 Sum_probs=30.0
Q ss_pred HHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhH
Q 045073 281 YGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAF 329 (402)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~ 329 (402)
.....+...+-..+..+.++.+..|++.+-.+-.+...+-..|-+.|..
T Consensus 349 l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~ 397 (406)
T KOG1479|consen 349 LMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSL 397 (406)
T ss_pred HHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhH
Confidence 3333333333344567778888888888877766666666555555553
No 269
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.69 E-value=0.12 Score=47.38 Aligned_cols=125 Identities=17% Similarity=0.215 Sum_probs=59.6
Q ss_pred HHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHH
Q 045073 209 ALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFA 288 (402)
Q Consensus 209 ~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (402)
..+-.++..+++.+..+|+.-+.-......++.+++++.++. .... +-++++.....
T Consensus 68 di~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~----------------------~~v~-~~l~Gv~las~ 124 (402)
T PF02487_consen 68 DILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFS----------------------PSVW-VRLLGVVLASL 124 (402)
T ss_pred HHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeec----------------------cchh-HHHHHHHHHhh
Confidence 344455556678888898764333334444555555555442 1112 22233333333
Q ss_pred hhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee
Q 045073 289 NFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF 361 (402)
Q Consensus 289 ~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~ 361 (402)
+.+.+-+.+.-.+..+++.. .+-.......++.+|+.....+.. .+-+.+..+.+...+.++-.+..+
T Consensus 125 ssg~GE~tfL~lt~~y~~~~----l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f 192 (402)
T PF02487_consen 125 SSGLGEVTFLSLTHFYGKSS----LSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYF 192 (402)
T ss_pred hhhhhHHHHHHHHHhcCccc----cccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHH
Confidence 33444344433455666432 222222223455566655555544 322456667766666654444444
No 270
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=95.69 E-value=0.16 Score=46.30 Aligned_cols=142 Identities=14% Similarity=-0.020 Sum_probs=76.9
Q ss_pred HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHH-HHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHH
Q 045073 205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSIC-MAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGL 283 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (402)
...+..+...+-+++.|.++|+.|+|+..+..+....+. .+.+.+.. + ...++..+++..
T Consensus 63 ~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~----~---------------~s~~~~~l~~~i 123 (438)
T COG2270 63 ASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIP----P---------------GSYLLLLLLFLI 123 (438)
T ss_pred HHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhC----C---------------CchHHHHHHHHH
Confidence 444555555566667899999999777665544443333 33333321 0 123333333333
Q ss_pred HHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhH--Hhhhh--------------ccCCcchhhHH
Q 045073 284 TLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGV--QYYTQ--------------KGDKQIKQSII 347 (402)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~--~~~~~--------------~~~~~~~~~~~ 347 (402)
....+.........++..++.+++.-++..++....+++|+.+.-... ..... ..+...+.++.
T Consensus 124 l~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~ 203 (438)
T COG2270 124 LASIGFEFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGL 203 (438)
T ss_pred HHHHhcchhheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHH
Confidence 222222233334567778888888888888888888887776544332 11111 01114567777
Q ss_pred HHHHHHHHHhhhee-eeec
Q 045073 348 TLAVVNFLGFLCSF-MVPE 365 (402)
Q Consensus 348 ~~~~~~~i~~i~~~-~~~e 365 (402)
+.++..++..+-.+ ..++
T Consensus 204 l~A~W~li~~iPm~~~v~~ 222 (438)
T COG2270 204 LAALWWLLFALPMILNVHD 222 (438)
T ss_pred HHHHHHHHHHhHHHhcccc
Confidence 77777666555444 3444
No 271
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=95.61 E-value=1.7 Score=40.63 Aligned_cols=39 Identities=13% Similarity=0.145 Sum_probs=33.7
Q ss_pred hhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045073 7 VIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSG 45 (402)
Q Consensus 7 ~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~ 45 (402)
....|.+..++-.|..++++.+.+++.++++.+..++.+
T Consensus 171 ~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 171 QFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 346788899999999999999999999999988888763
No 272
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=95.38 E-value=1.2 Score=41.72 Aligned_cols=124 Identities=6% Similarity=-0.023 Sum_probs=73.8
Q ss_pred hhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCC---------CCCCc---cccCCchHHHHHH
Q 045073 213 TVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPK---------KDPLH---EYCDGNHAWFMIL 280 (402)
Q Consensus 213 ~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~---~~~~~~~~~~~~~ 280 (402)
+++..++-.++.+++.|++++..........++++++..+...+. .+.+ ..|.. ..---+.|.....
T Consensus 75 avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~-~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~ 153 (509)
T COG3202 75 AVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDI-LHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLF 153 (509)
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccc-cCCCHHHHHHHHhhCCccceeeeEeecchHHHHH
Confidence 344455677888899998888777766666666666654421111 0000 00100 0000011233333
Q ss_pred HHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhc
Q 045073 281 YGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQK 337 (402)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~ 337 (402)
+.+.-...+....-..|..+.|++..++-.+-+++.+...+++..++..+..++...
T Consensus 154 Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 154 YIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 333333333333335677889999999999999999999999998888877777653
No 273
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.29 E-value=0.09 Score=48.33 Aligned_cols=117 Identities=12% Similarity=-0.021 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccc---
Q 045073 231 IIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPAR--- 307 (402)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--- 307 (402)
+.++++.++..++.+++.+........+ +.....+.+.+ .....+.++.=+...++.+|.++++
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~------------~~~~~~~~~gL-~lia~G~G~~K~ni~~~~~dq~~~~~~~ 68 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPS------------GIQLGLFYIGL-ALIAVGTGGIKPNISPFGADQYDEDDDS 68 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------------------CHHHHHH-HHHHHHHHCCHHHHHHHHHHCSSTTTTT
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhh------------hHHHHHHHHHH-HHHHhccccccccHHHHHHHHhcccchh
Confidence 3456677777777777555443221100 01111222222 2233445555667777888888765
Q ss_pred hhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheee
Q 045073 308 LRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM 362 (402)
Q Consensus 308 ~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~ 362 (402)
.|...........++|..++....+++.+.. +|...|.+.++..+++.+..+.
T Consensus 69 ~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~--~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 69 RRDSFFNWFYWGINIGSLFSPTLVPYIQQNY--GWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS---HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhhHHHHHHHHhhhhHhhcccchhhcccc--chhhhhhHHHHHHHHHHHHHHh
Confidence 4667778888889999999999999998777 8999999988888877766554
No 274
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=95.10 E-value=0.39 Score=45.54 Aligned_cols=123 Identities=10% Similarity=-0.011 Sum_probs=70.6
Q ss_pred hhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCC-CCC----C-CCCCCccccC----CchHHHHHHHHH
Q 045073 214 VPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGK-KCD----P-KKDPLHEYCD----GNHAWFMILYGL 283 (402)
Q Consensus 214 ~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~-~~~~~~~~~~----~~~~~~~~~~~~ 283 (402)
++...+-.+++++++|.+++.+..........++++..+...+. +.+ . ....+.+... -..|.....+..
T Consensus 73 ~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~ 152 (491)
T PF03219_consen 73 ILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVM 152 (491)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHH
Confidence 33344678999999999988777666666666666543311110 000 0 0000000000 001111122222
Q ss_pred HHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhh
Q 045073 284 TLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQ 336 (402)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~ 336 (402)
.-..++....-..|.+++|.++.++-.+-.++....+++|.+++..+.....+
T Consensus 153 aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 153 AELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222222468899999999999999999999999999999887777666
No 275
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=94.73 E-value=1.9 Score=41.91 Aligned_cols=145 Identities=18% Similarity=0.182 Sum_probs=79.8
Q ss_pred hhhhhhhhHHHhhhc-cchhHHHHHHHHHHHHHHHHHHHHhhcccCC--CCCCCCCCCccccCCchHH-HHHHHHH--HH
Q 045073 212 ATVPGYWFTVFLIDR-IGRFIIQLGGFLLMSICMAILGARYDSLRGK--KCDPKKDPLHEYCDGNHAW-FMILYGL--TL 285 (402)
Q Consensus 212 ~~~~g~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~ 285 (402)
......+++++++|. +||-+.+.++.++..++..++.......... .+ +..+....|+...-. ..+++.. ..
T Consensus 85 ~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~--~~~~~~~~c~~~s~~q~~~~~~~l~li 162 (571)
T KOG1237|consen 85 TQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMC--KFKPGGNVCESPSKLQLAVLYGALYLI 162 (571)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc--cCCCCCCcccCcchHHHHHHHHHHHHh
Confidence 344455678899997 4888888888877777765555443322111 00 000011111122211 1222221 12
Q ss_pred HHHhhCCcccccccccccccc----chhh--hhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhh
Q 045073 286 FFANFGPNSTTFIVPAELFPA----RLRS--TCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLC 359 (402)
Q Consensus 286 ~~~~~~~~~~~~~~~~e~~p~----~~r~--~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~ 359 (402)
..+..+.-+...+.-+|-++. +.+. .-+.......++|..++..+..+..+.. +|...|.+..+..+++.++
T Consensus 163 a~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~--~w~lgf~i~~~~~~lai~i 240 (571)
T KOG1237|consen 163 ALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNV--GWKLGFGIPTVLNALAILI 240 (571)
T ss_pred eeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcc--cceeeccHHHHHHHHHHHH
Confidence 223445556667777888872 2223 4456666667777777777777776665 7877777777766665544
Q ss_pred e
Q 045073 360 S 360 (402)
Q Consensus 360 ~ 360 (402)
.
T Consensus 241 F 241 (571)
T KOG1237|consen 241 F 241 (571)
T ss_pred H
Confidence 3
No 276
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=94.60 E-value=0.016 Score=54.05 Aligned_cols=67 Identities=16% Similarity=0.080 Sum_probs=50.6
Q ss_pred HHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHH
Q 045073 165 LDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSIC 243 (402)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~ 243 (402)
....+-.....++.+++++|+++...+. +....-+..+++.+++|+++||+.+|+.++++..+..+.
T Consensus 23 ~~~~~g~l~pll~vy~kQLGl~p~~~Gt------------l~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~ 89 (618)
T KOG3762|consen 23 FGARFGSLFPLLAVYFKQLGLNPAVVGT------------LTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVT 89 (618)
T ss_pred eeecccccchHHHHHHHHcCCCHHHhhh------------hhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHH
Confidence 3344455666778899999999998776 667777888899999999999998777666665544433
No 277
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.33 E-value=0.28 Score=45.13 Aligned_cols=66 Identities=14% Similarity=0.180 Sum_probs=49.6
Q ss_pred cchhhhhhccCcc---cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhH
Q 045073 4 LSAVIMSEYANKR---TRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGA 80 (402)
Q Consensus 4 ~~~~~i~e~~~~~---~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~ 80 (402)
....+++|-++++ +|.+....+..+.++|.+++..+..++. ++.||.+.|.++.
T Consensus 53 ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~-----------------------~~~~~~~~f~i~~ 109 (372)
T PF00854_consen 53 NISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQ-----------------------QNYGWFLGFGIPA 109 (372)
T ss_dssp HHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHH-----------------------HCS-HHHHHHHHH
T ss_pred cHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhc-----------------------cccchhhhhhHHH
Confidence 3456778888765 4666777888999999999988887775 6789999999988
Q ss_pred HHHHHHHHHHhh
Q 045073 81 VPAALTYYWRMK 92 (402)
Q Consensus 81 i~~~~~~~~~~~ 92 (402)
+..+++++.+..
T Consensus 110 ~~~~~~~~~f~~ 121 (372)
T PF00854_consen 110 IGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh
Confidence 777766655433
No 278
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=93.83 E-value=2.7 Score=38.49 Aligned_cols=30 Identities=10% Similarity=-0.208 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhc
Q 045073 154 HLLGTTSTWFLLDIAFYTINLAQKDIYPAT 183 (402)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (402)
..+..++...+.....+.+.+-.+++.+++
T Consensus 19 v~~i~~llGiG~LlpWN~fiTa~~y~~~~~ 48 (406)
T KOG1479|consen 19 VYLIFLLLGIGTLLPWNMFITASDYYYYRF 48 (406)
T ss_pred HHHHHHHHhcccccchHhhhccHHHHHhhc
Confidence 344444444455556666666666666553
No 279
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=93.80 E-value=0.75 Score=41.51 Aligned_cols=44 Identities=7% Similarity=-0.008 Sum_probs=35.6
Q ss_pred ccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhcc
Q 045073 295 TTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKG 338 (402)
Q Consensus 295 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~ 338 (402)
..++..+.+.++...|+-+.+.++..++|+-.-..+..++.|..
T Consensus 389 ~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~l 432 (510)
T KOG3574|consen 389 SGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGL 432 (510)
T ss_pred HHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccC
Confidence 34556688899999999999999999999887777777776644
No 280
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.66 E-value=1 Score=42.16 Aligned_cols=106 Identities=11% Similarity=-0.035 Sum_probs=72.4
Q ss_pred HHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHH
Q 045073 206 FLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTL 285 (402)
Q Consensus 206 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (402)
..+......+.+++++.+.|+++.|+.+.++........+.+... +. .+........
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~----------------------N~-y~~yfssall 112 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP----------------------NS-YYLYFSSALL 112 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc----------------------ch-HHHHHHHHHh
Confidence 445555666777889999999999999998876655544433332 11 3333334343
Q ss_pred HHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhh
Q 045073 286 FFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYY 334 (402)
Q Consensus 286 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~ 334 (402)
+++....+...-.|.+|..+.+.+.+-.++.-.+...+.++|......+
T Consensus 113 G~Gaallw~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~ 161 (461)
T KOG3098|consen 113 GFGAALLWTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIILFIY 161 (461)
T ss_pred hhhHHheecccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhheee
Confidence 4433344445667889999999999999999999998888887554433
No 281
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=93.40 E-value=9.2 Score=38.10 Aligned_cols=72 Identities=15% Similarity=0.148 Sum_probs=47.2
Q ss_pred CcchhhhhhccCcc---cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHh
Q 045073 3 PLSAVIMSEYANKR---TRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFG 79 (402)
Q Consensus 3 ~~~~~~i~e~~~~~---~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~ 79 (402)
|...+...|-++++ +|-....++..+.++|.++++.+..++...... .....+|...|.+.
T Consensus 104 p~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~----------------fg~~~~~~~aF~i~ 167 (654)
T TIGR00926 104 PCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGC----------------FGCQDCYPLAFGVP 167 (654)
T ss_pred cCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc----------------cccCcchHHHHHHH
Confidence 34556677777654 366677788888889988888887776421100 01245799999997
Q ss_pred HHHHHHHHHHH
Q 045073 80 AVPAALTYYWR 90 (402)
Q Consensus 80 ~i~~~~~~~~~ 90 (402)
++..++.++..
T Consensus 168 ~i~m~ia~lvf 178 (654)
T TIGR00926 168 AILMILALIVF 178 (654)
T ss_pred HHHHHHHHHHH
Confidence 77766655443
No 282
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=93.33 E-value=1.2 Score=40.22 Aligned_cols=68 Identities=18% Similarity=0.118 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhh-----cc
Q 045073 153 LHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLID-----RI 227 (402)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~d-----r~ 227 (402)
+.+..+.+.+..+.+.+-... ..|.+++.-|.|-++.+. ...... -..--++...++| |+
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~------------fS~ay~--P~sLKllWaPiVDs~y~k~~ 95 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAI------------FSFAYW--PFSLKLLWAPIVDSVYSKRF 95 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhh------------hhhhhh--HHHHHHHHHhhhHHHHHHhh
Confidence 456667777777765553333 779888877776555332 111111 0111235777888 99
Q ss_pred chhHHHHH
Q 045073 228 GRFIIQLG 235 (402)
Q Consensus 228 grr~~~~~ 235 (402)
|||+..++
T Consensus 96 GrrksWvv 103 (510)
T KOG3574|consen 96 GRRKSWVV 103 (510)
T ss_pred ccccceee
Confidence 99986543
No 283
>PRK03612 spermidine synthase; Provisional
Probab=93.08 E-value=4.1 Score=39.33 Aligned_cols=42 Identities=17% Similarity=0.196 Sum_probs=26.6
Q ss_pred hhhhhHHHHHHHHhHHHHhHhHHhhhh-ccCCcchhhHHHHHHHH
Q 045073 310 STCHGISAAAGKAGAIVGAFGVQYYTQ-KGDKQIKQSIITLAVVN 353 (402)
Q Consensus 310 ~~~~~~~~~~~~~g~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 353 (402)
+...|-......+|+++|+++.+.+.- .. |.....++.+.+.
T Consensus 144 g~~~g~ly~~ntlGa~~G~l~~~~vLlp~l--G~~~t~~~~a~l~ 186 (521)
T PRK03612 144 GHNVATVLAADYLGALVGGLAFPFLLLPRL--GLIRTAALTGSLN 186 (521)
T ss_pred hhhhhhhHhHHhHHHHHHHHHHHHHHHHhc--chHHHHHHHHHHH
Confidence 455677788888899988887776543 34 4444444444433
No 284
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=92.98 E-value=1.6 Score=41.04 Aligned_cols=34 Identities=6% Similarity=-0.045 Sum_probs=18.5
Q ss_pred ccccccccchhhhhhhHHHHHHHHhHHHHhHhHH
Q 045073 299 VPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQ 332 (402)
Q Consensus 299 ~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~ 332 (402)
++-.+..++.++-|.........+|.+++-.++-
T Consensus 142 WALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFl 175 (544)
T PF13000_consen 142 WALTMLSPENVGYASTCQTVGQTAGYFLSFTVFL 175 (544)
T ss_pred hhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHH
Confidence 3444556677777655444444555555554443
No 285
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=91.83 E-value=9.5 Score=34.41 Aligned_cols=41 Identities=15% Similarity=0.128 Sum_probs=23.0
Q ss_pred HHHHHHhhhhhhhhhHHHhh-hccchhHHHHHHHHHHHHHHH
Q 045073 205 MFLVALFATVPGYWFTVFLI-DRIGRFIIQLGGFLLMSICMA 245 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~-dr~grr~~~~~~~~~~~~~~~ 245 (402)
+..-..++.++|+.+..++. ++......+.....+.++++.
T Consensus 283 IFssFM~a~MlGS~lf~~l~s~~~~~e~~l~~v~~~aa~~l~ 324 (354)
T PF05631_consen 283 IFSSFMVAMMLGSSLFSRLLSKSLRPESLLRYVFAVAAVSLA 324 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 56666777888888776554 444444444444444344433
No 286
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=90.46 E-value=2.4 Score=39.89 Aligned_cols=25 Identities=32% Similarity=0.340 Sum_probs=11.6
Q ss_pred hhhhhhhhHHHhhhccchhHHHHHH
Q 045073 212 ATVPGYWFTVFLIDRIGRFIIQLGG 236 (402)
Q Consensus 212 ~~~~g~~~~g~l~dr~grr~~~~~~ 236 (402)
..++..+....+..|+..|.-+..+
T Consensus 57 ~~l~~~~~~~~~~~~i~~~~Ri~~~ 81 (437)
T TIGR00939 57 PSLLFNSLNLFLIFRIPVTVRLLGG 81 (437)
T ss_pred HHHHHHHHHHHHhhccCccchhHHH
Confidence 3333334455566666553333334
No 287
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=87.56 E-value=1.9 Score=37.00 Aligned_cols=67 Identities=18% Similarity=0.212 Sum_probs=45.0
Q ss_pred hhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHHHH
Q 045073 7 VIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAALT 86 (402)
Q Consensus 7 ~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~~~ 86 (402)
....+.+| ++||++.++.-...+++..+-..+...+. +...-+..+++...+.++.
T Consensus 119 vt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f-----------------------~~~~~~fll~la~~~~~v~ 174 (250)
T PF06813_consen 119 VTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFF-----------------------GDDPSSFLLFLAVLPAVVC 174 (250)
T ss_pred HHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHc-----------------------CCChHHHHHHHHHHHHHHH
Confidence 33457777 58999999999999998887777666554 2233445555566666666
Q ss_pred HHHHhhccCCc
Q 045073 87 YYWRMKMPETA 97 (402)
Q Consensus 87 ~~~~~~~pesp 97 (402)
++..++++..|
T Consensus 175 l~~~~~vr~~~ 185 (250)
T PF06813_consen 175 LVAMFFVRPVP 185 (250)
T ss_pred HHHhhheeccC
Confidence 66655654443
No 288
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=87.03 E-value=0.48 Score=40.53 Aligned_cols=46 Identities=15% Similarity=0.117 Sum_probs=28.1
Q ss_pred hhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHH
Q 045073 179 IYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGG 236 (402)
Q Consensus 179 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~ 236 (402)
+++.+|+...+.+. +.+......++...+.|-++||.|||+.-..-
T Consensus 63 LYstYgFgkG~Igq------------LfiaGfgSsmLFGtivgSLaDkqGRKracvty 108 (454)
T KOG4332|consen 63 LYSTYGFGKGDIGQ------------LFIAGFGSSMLFGTIVGSLADKQGRKRACVTY 108 (454)
T ss_pred eehhcCccCCccce------------eeecccchHHHHHHHHHHHHhhhccccceeee
Confidence 34556666555433 33333444455556788899999999875544
No 289
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=84.96 E-value=41 Score=32.99 Aligned_cols=36 Identities=11% Similarity=0.102 Sum_probs=29.8
Q ss_pred cccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhc
Q 045073 302 ELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQK 337 (402)
Q Consensus 302 e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~ 337 (402)
+-+|++.|+.+.++......+|..++..+.......
T Consensus 485 ~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~ 520 (571)
T KOG1237|consen 485 SQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFS 520 (571)
T ss_pred hhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 457999999999999999999999999877554443
No 290
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=77.14 E-value=46 Score=28.46 Aligned_cols=34 Identities=18% Similarity=0.085 Sum_probs=21.5
Q ss_pred HHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073 206 FLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL 239 (402)
Q Consensus 206 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~ 239 (402)
.+.-.++..+..+.+-+++.|+.-|.+.+++..+
T Consensus 246 ~iGH~lCT~lAVigGk~lAskIS~rtVt~~ggi~ 279 (294)
T KOG2881|consen 246 IIGHALCTGLAVIGGKYLASKISVRTVTLIGGIL 279 (294)
T ss_pred HHHHHHHHHHHHhhhHHHhhhheeEEEEEecchh
Confidence 3344455555555556788899888887777443
No 291
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=76.76 E-value=50 Score=28.76 Aligned_cols=139 Identities=11% Similarity=0.006 Sum_probs=62.9
Q ss_pred HHHHHHhhhhhhhhhHHHhhhccchh--HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHH
Q 045073 205 MFLVALFATVPGYWFTVFLIDRIGRF--IIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYG 282 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr~grr--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (402)
+..-..++.++|+-+..++..|-..| ..+.+.+.+.+..+.+...... ....+ . ..... .+.++
T Consensus 287 iFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~-vsP~k-e-----------s~~~s-~i~F~ 352 (454)
T KOG4332|consen 287 IFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSS-VSPSK-E-----------SPSES-LIGFC 352 (454)
T ss_pred HHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhc-cCCCc-C-----------CchHH-HHHHH
Confidence 44555666777776766665553332 3444444444443333222221 11111 0 11212 22222
Q ss_pred HHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhe
Q 045073 283 LTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCS 360 (402)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 360 (402)
.+-. +....+|...-+=++..|.+.|++.+-+...--++...++-+ ..-.+....+-+..|-+..+...++.+..
T Consensus 353 ~~E~-cvGlfwPSimkmRsqyIPEearstimNfFRvPLnifvClvLy--nlh~~~~p~~tr~mf~icS~~~~~a~i~~ 427 (454)
T KOG4332|consen 353 LFEA-CVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLY--NLHVDAFPTTTRNMFGICSAFLFVASILQ 427 (454)
T ss_pred HHHH-HHhhcchHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhhe--ecccccCccccchhhhhhHHHHHHHHHHH
Confidence 2222 233455666667788899999988655543332222211111 10011111134456666666665554443
No 292
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=76.55 E-value=10 Score=29.52 Aligned_cols=32 Identities=6% Similarity=0.065 Sum_probs=22.2
Q ss_pred ccccccccccccchhhhhhhHHHHHHHHhHHH
Q 045073 295 TTFIVPAELFPARLRSTCHGISAAAGKAGAIV 326 (402)
Q Consensus 295 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i 326 (402)
+.|..++-...++..|...|+-.+-.+++.+.
T Consensus 114 isYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 114 ISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 44555566667777899999888877766543
No 293
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=73.60 E-value=57 Score=28.08 Aligned_cols=58 Identities=2% Similarity=-0.089 Sum_probs=26.5
Q ss_pred cchhhhhhhHHHHHHHHhHHHHhHhHHhh----hhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073 306 ARLRSTCHGISAAAGKAGAIVGAFGVQYY----TQKGDKQIKQSIITLAVVNFLGFLCSFMV 363 (402)
Q Consensus 306 ~~~r~~~~~~~~~~~~~g~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 363 (402)
+-.|..+.|+...+....+.+.....+.. .+.........=++..++.+++..+..++
T Consensus 74 pii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fi 135 (254)
T PF07857_consen 74 PIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFI 135 (254)
T ss_pred hHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeee
Confidence 34566666666666655555444433221 11110022223334444555666666666
No 294
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=71.09 E-value=1.2 Score=37.89 Aligned_cols=17 Identities=24% Similarity=0.389 Sum_probs=0.0
Q ss_pred HHHHHHhhheeeeeccC
Q 045073 351 VVNFLGFLCSFMVPETN 367 (402)
Q Consensus 351 ~~~~i~~i~~~~~~et~ 367 (402)
.+.++++++.+++.+++
T Consensus 173 L~LFlaiLIWlY~H~~~ 189 (381)
T PF05297_consen 173 LLLFLAILIWLYVHDQR 189 (381)
T ss_dssp -----------------
T ss_pred HHHHHHHHHHHHhcCCC
Confidence 33344444444555554
No 295
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=70.59 E-value=60 Score=31.49 Aligned_cols=24 Identities=8% Similarity=0.184 Sum_probs=12.5
Q ss_pred HHHHHhhhhhhhhhHHHhhhccch
Q 045073 206 FLVALFATVPGYWFTVFLIDRIGR 229 (402)
Q Consensus 206 ~~~~~~~~~~g~~~~g~l~dr~gr 229 (402)
.....+.+.++...++++-..++.
T Consensus 303 i~~y~~~~~iaGy~S~~~yk~~~g 326 (521)
T PF02990_consen 303 IILYALTSFIAGYVSARLYKSFGG 326 (521)
T ss_pred HHHHHHHhhHHHHHHHHHHHHcCC
Confidence 334445555555555555555543
No 296
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=70.41 E-value=9 Score=33.15 Aligned_cols=62 Identities=19% Similarity=0.418 Sum_probs=45.9
Q ss_pred CcchhhhhhccCc-ccchhHHHHHHH-HHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhH
Q 045073 3 PLSAVIMSEYANK-RTRGAFIAAVFA-MQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGA 80 (402)
Q Consensus 3 ~~~~~~i~e~~~~-~~Rg~~~~~~~~-~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~ 80 (402)
+...+++.|+.|+ ++|+...+.... ...+|.++++.++..+... ...+||..|....
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~ 171 (338)
T COG0477 113 PVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA---------------------LLWGWRAAFLLAA 171 (338)
T ss_pred HHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------HhcchHHHHHHHH
Confidence 4567889999998 788999998888 5888999998777776522 2357999776655
Q ss_pred HHHHH
Q 045073 81 VPAAL 85 (402)
Q Consensus 81 i~~~~ 85 (402)
+....
T Consensus 172 ~~~~~ 176 (338)
T COG0477 172 LLGLL 176 (338)
T ss_pred HHHHH
Confidence 55443
No 297
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=69.91 E-value=17 Score=33.46 Aligned_cols=9 Identities=22% Similarity=0.560 Sum_probs=4.2
Q ss_pred hHHHhhhcc
Q 045073 219 FTVFLIDRI 227 (402)
Q Consensus 219 ~~g~l~dr~ 227 (402)
+.|++..|.
T Consensus 14 ~~G~~~~~~ 22 (385)
T PF03547_consen 14 LLGYLLGRF 22 (385)
T ss_pred HHHHHHHHh
Confidence 344555443
No 298
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=68.47 E-value=27 Score=22.02 Aligned_cols=30 Identities=7% Similarity=0.129 Sum_probs=20.7
Q ss_pred CCchhHHHHHHhHHHHHHHHHHHhhccCCc
Q 045073 68 GDYLWRIVLMFGAVPAALTYYWRMKMPETA 97 (402)
Q Consensus 68 ~~~~Wr~~f~~~~i~~~~~~~~~~~~pesp 97 (402)
..++.+...+++.+.+++...+...+|+++
T Consensus 27 ~~~n~~~~~Ii~vi~~i~~~~~~~~i~~~~ 56 (57)
T PF11151_consen 27 VTYNFTTAAIIAVIFGIIVANIIAVIPKKS 56 (57)
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 456677777778888877776665666543
No 299
>PRK10263 DNA translocase FtsK; Provisional
Probab=66.72 E-value=62 Score=34.84 Aligned_cols=19 Identities=26% Similarity=0.516 Sum_probs=9.7
Q ss_pred HhhhhhhhhhHHHhhhccc
Q 045073 210 LFATVPGYWFTVFLIDRIG 228 (402)
Q Consensus 210 ~~~~~~g~~~~g~l~dr~g 228 (402)
..++.+|..++..+..-+|
T Consensus 62 Nl~GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 62 NLGGMPGAWLADTLFFIFG 80 (1355)
T ss_pred cccchHHHHHHHHHHHHHh
Confidence 3445555555555554555
No 300
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=66.26 E-value=13 Score=26.70 Aligned_cols=27 Identities=26% Similarity=0.212 Sum_probs=16.8
Q ss_pred hhHHHhhhcc-chhHHHHHHHHHHHHHH
Q 045073 218 WFTVFLIDRI-GRFIIQLGGFLLMSICM 244 (402)
Q Consensus 218 ~~~g~l~dr~-grr~~~~~~~~~~~~~~ 244 (402)
...||+.||+ |.++..++.+++.+.+.
T Consensus 60 a~iG~llD~~agTsPwglIv~lllGf~A 87 (116)
T COG5336 60 AGIGWLLDKFAGTSPWGLIVFLLLGFGA 87 (116)
T ss_pred HHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 3678999996 56666555554444433
No 301
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=65.68 E-value=19 Score=26.16 Aligned_cols=39 Identities=15% Similarity=0.212 Sum_probs=26.2
Q ss_pred ccccccCCCCCchhHHHHHHhHHHHHH-HHHHHhhccCCc
Q 045073 59 NHVLSAQPQGDYLWRIVLMFGAVPAAL-TYYWRMKMPETA 97 (402)
Q Consensus 59 ~~~~~~~~~~~~~Wr~~f~~~~i~~~~-~~~~~~~~pesp 97 (402)
+|...++..+..+|+.+|+++...+++ +.+...+.||+.
T Consensus 46 ~p~~~G~~~d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 46 NPPSPGEKRDWEGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred CCCcCCCcchHhhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 444445556778999999996665554 455556678874
No 302
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=60.10 E-value=40 Score=24.31 Aligned_cols=35 Identities=9% Similarity=0.147 Sum_probs=27.5
Q ss_pred ccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccC
Q 045073 305 PARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGD 339 (402)
Q Consensus 305 p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~ 339 (402)
.++.++.+.++-...-.+++++.....|++.+++-
T Consensus 36 a~s~k~~~~a~klssefIsGilVGa~iG~llD~~a 70 (116)
T COG5336 36 AESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFA 70 (116)
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34567888888888888888877788899988763
No 303
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=60.10 E-value=1.3e+02 Score=27.13 Aligned_cols=26 Identities=15% Similarity=0.158 Sum_probs=18.8
Q ss_pred hhhhhhhHHHhhhccchhHHHHHHHH
Q 045073 213 TVPGYWFTVFLIDRIGRFIIQLGGFL 238 (402)
Q Consensus 213 ~~~g~~~~g~l~dr~grr~~~~~~~~ 238 (402)
.+..+++.+.+++++|-|+.+..+..
T Consensus 71 l~~s~m~~~~~Ir~~g~K~tm~lav~ 96 (390)
T KOG3097|consen 71 LIDSSMFMPLLIRFLGTKWTMVLAVF 96 (390)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 34445566689999999998876643
No 304
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=59.02 E-value=1.1e+02 Score=27.51 Aligned_cols=61 Identities=10% Similarity=0.019 Sum_probs=36.2
Q ss_pred hHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhh
Q 045073 274 HAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYY 334 (402)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~ 334 (402)
+++++.+..+.-+..+++..-.++--+.+-.+++.|-.+++.+...-.+|..++.++.-.+
T Consensus 341 si~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 341 SIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 3444444444444443333333443445556778899999988887777777766554433
No 305
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=56.99 E-value=70 Score=22.94 Aligned_cols=29 Identities=10% Similarity=0.054 Sum_probs=15.3
Q ss_pred hhhhhhHHHhhhccchhHHHHHHHHHHHH
Q 045073 214 VPGYWFTVFLIDRIGRFIIQLGGFLLMSI 242 (402)
Q Consensus 214 ~~g~~~~g~l~dr~grr~~~~~~~~~~~~ 242 (402)
++|.+++-||-.+++-++.+.+.+++.++
T Consensus 57 l~G~~lG~WLD~~~~t~~~~tl~~lllGv 85 (100)
T TIGR02230 57 LLGVAVGIWLDRHYPSPFSWTLTMLIVGV 85 (100)
T ss_pred HHHHHHHHHHHhhcCCCcHHHHHHHHHHH
Confidence 33444555666667766655544444333
No 306
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=56.70 E-value=13 Score=33.43 Aligned_cols=73 Identities=12% Similarity=0.071 Sum_probs=47.1
Q ss_pred ccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccC
Q 045073 295 TTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETN 367 (402)
Q Consensus 295 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~ 367 (402)
..++++-+..+++.+-++.|.+....-.|...|..+...+...-..++...=.+..+...++..+.+++|..+
T Consensus 114 AYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~ 186 (433)
T KOG3810|consen 114 AYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVK 186 (433)
T ss_pred hhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCc
Confidence 3556666777888888888988888888888888777666554211333333344444455666667776554
No 307
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=55.13 E-value=1.8e+02 Score=26.99 Aligned_cols=44 Identities=7% Similarity=0.027 Sum_probs=27.8
Q ss_pred hhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHH
Q 045073 310 STCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFL 355 (402)
Q Consensus 310 ~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 355 (402)
....+.....-.....+.|.+.|.+.... +.+..-.++++..++
T Consensus 174 t~mnatir~iDq~tn~Lapv~tg~Iitfv--sl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 174 TNMNATIRGIDQSTNLLAPVITGLIITFV--SLRASAGTFAAWALV 217 (503)
T ss_pred hhcchhhhhhhhhhhchhhhhhcccceee--chhhhhhhhHHHHHH
Confidence 33335555555667788999888888776 566554555555444
No 308
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=54.67 E-value=1.2e+02 Score=27.46 Aligned_cols=19 Identities=16% Similarity=0.198 Sum_probs=8.5
Q ss_pred chhhHHHHHHHHHHHhhhe
Q 045073 342 IKQSIITLAVVNFLGFLCS 360 (402)
Q Consensus 342 ~~~~~~~~~~~~~i~~i~~ 360 (402)
..+.+++..++.++++++.
T Consensus 285 ~~~ly~~af~lIiiG~vvy 303 (334)
T PF06027_consen 285 FSWLYILAFALIIIGFVVY 303 (334)
T ss_pred ccHHHHHHHHHHHHHhheE
Confidence 3344444444444444443
No 309
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=51.27 E-value=28 Score=21.89 Aligned_cols=21 Identities=19% Similarity=0.276 Sum_probs=16.7
Q ss_pred chhHHHHHHhHHHHHHHHHHH
Q 045073 70 YLWRIVLMFGAVPAALTYYWR 90 (402)
Q Consensus 70 ~~Wr~~f~~~~i~~~~~~~~~ 90 (402)
.|||...+++++.+++++.+.
T Consensus 3 rg~r~~~~~ggfVg~iG~a~Y 23 (58)
T PF15061_consen 3 RGWRYALFVGGFVGLIGAALY 23 (58)
T ss_pred ccccchhhHHHHHHHHHHHHh
Confidence 479999999888888866554
No 310
>COG1288 Predicted membrane protein [Function unknown]
Probab=49.08 E-value=2.3e+02 Score=26.60 Aligned_cols=31 Identities=16% Similarity=0.175 Sum_probs=18.3
Q ss_pred CCchhHHHHHHhHHHHHHHHHHH--hhccCCch
Q 045073 68 GDYLWRIVLMFGAVPAALTYYWR--MKMPETAR 98 (402)
Q Consensus 68 ~~~~Wr~~f~~~~i~~~~~~~~~--~~~pesp~ 98 (402)
+..+||...++......+..+.+ ..+++.|.
T Consensus 214 sG~~~Riv~~v~~~~~~i~y~~~Ya~KvkkdP~ 246 (481)
T COG1288 214 SGMGLRIVVWVVFTLISIIYVYWYASKVKKDPT 246 (481)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 45789999998554444433332 33666554
No 311
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=47.29 E-value=97 Score=21.71 Aligned_cols=33 Identities=6% Similarity=0.161 Sum_probs=20.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q 045073 150 KHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPA 182 (402)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (402)
++++..+.+....+....++-....+.|.++..
T Consensus 13 ~r~r~~~~l~~i~l~~y~~~~ll~a~~p~~m~~ 45 (91)
T PF04341_consen 13 RRRRLAWPLSAIFLVLYFGFVLLSAFAPELMAT 45 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHcC
Confidence 333455555555666566666677777877754
No 312
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=43.87 E-value=26 Score=31.09 Aligned_cols=87 Identities=17% Similarity=0.268 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHh
Q 045073 278 MILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGF 357 (402)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 357 (402)
+.++++.....+.|.+-+.+.-.+..+|...-+.-.+=.. ..+.+|..-...+.+..+-+.+.+.+++..+.++-.
T Consensus 117 ~sL~GV~~aSissGlGEiTFL~lss~Y~~~~i~~WSSGTG----gAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa 192 (409)
T KOG3880|consen 117 MSLLGVVFASISSGLGEITFLALSSRYPSIVIAGWSSGTG----GAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFA 192 (409)
T ss_pred HHHhhhhhhhhcCCcceeehhhhhccCCCceeccccCCCC----cchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHH
Confidence 3444444444455566566666666666544332211111 123344444444444332255666666666655444
Q ss_pred hheee-e--eccCC
Q 045073 358 LCSFM-V--PETNG 368 (402)
Q Consensus 358 i~~~~-~--~et~~ 368 (402)
...++ + ||+..
T Consensus 193 ~~yf~lL~~pes~~ 206 (409)
T KOG3880|consen 193 FAYFFLLKSPESVY 206 (409)
T ss_pred HHHHheeCCCcccc
Confidence 44443 3 55543
No 313
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=39.01 E-value=1.3e+02 Score=20.82 Aligned_cols=23 Identities=9% Similarity=0.148 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 045073 22 IAAVFAMQGMGILFAGVISLIFS 44 (402)
Q Consensus 22 ~~~~~~~~~lG~~~~~~~~~~l~ 44 (402)
.+.......+|.++|.+....+.
T Consensus 29 ag~lasaNy~GYL~GAl~~~~~~ 51 (85)
T PF06779_consen 29 AGWLASANYLGYLVGALLASRLP 51 (85)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555677888888888777664
No 314
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=38.67 E-value=1e+02 Score=23.65 Aligned_cols=25 Identities=8% Similarity=-0.019 Sum_probs=18.8
Q ss_pred hhhccCcccchhHHHHHHHHHHHHH
Q 045073 9 MSEYANKRTRGAFIAAVFAMQGMGI 33 (402)
Q Consensus 9 i~e~~~~~~Rg~~~~~~~~~~~lG~ 33 (402)
+.|++|+..|..+.+.+........
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~~k 84 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSAVK 84 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 5799999999998887765544433
No 315
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=37.10 E-value=3.7e+02 Score=25.46 Aligned_cols=23 Identities=17% Similarity=0.180 Sum_probs=9.9
Q ss_pred HHHhhhhhhhhhHHHhhhcc-chh
Q 045073 208 VALFATVPGYWFTVFLIDRI-GRF 230 (402)
Q Consensus 208 ~~~~~~~~g~~~~g~l~dr~-grr 230 (402)
+.++.+.+...++|-+-.|. |||
T Consensus 335 vYAlTs~i~GY~~gs~Y~r~gG~~ 358 (593)
T KOG1277|consen 335 VYALTSPINGYVSGSFYARLGGRR 358 (593)
T ss_pred HHHhcccccccccceeeehhccHH
Confidence 33444444333444444444 454
No 316
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=36.56 E-value=86 Score=24.02 Aligned_cols=22 Identities=14% Similarity=0.330 Sum_probs=16.8
Q ss_pred cccccccchhhhhhhHHHHHHH
Q 045073 300 PAELFPARLRSTCHGISAAAGK 321 (402)
Q Consensus 300 ~~e~~p~~~r~~~~~~~~~~~~ 321 (402)
+.|++|+..|....+.++....
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~ 81 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSS 81 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHH
Confidence 3799999999988777665444
No 317
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=35.94 E-value=35 Score=29.46 Aligned_cols=48 Identities=25% Similarity=0.231 Sum_probs=28.0
Q ss_pred HhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhH---------HHhhhccchhHH
Q 045073 173 NLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFT---------VFLIDRIGRFII 232 (402)
Q Consensus 173 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---------g~l~dr~grr~~ 232 (402)
.+|+-.++++.|.++...+. ......+...+..++. .+-.||+|||..
T Consensus 37 FTYlllfltqiglsp~~~Am------------lML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~ 93 (412)
T KOG4830|consen 37 FTYLLLFLTQIGLSPSSRAM------------LMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMS 93 (412)
T ss_pred HHHHHHHHHHhcCCcchhHH------------HHHhhHHHHHHhcccccccccccccHHHhhhhcceee
Confidence 33444566778888876544 4444444444444444 355789999853
No 318
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=35.45 E-value=1.7e+02 Score=21.05 Aligned_cols=22 Identities=5% Similarity=0.030 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 045073 23 AAVFAMQGMGILFAGVISLIFS 44 (402)
Q Consensus 23 ~~~~~~~~lG~~~~~~~~~~l~ 44 (402)
+.......+..++|..+|.++-
T Consensus 46 g~IG~~~v~pil~G~~lG~WLD 67 (100)
T TIGR02230 46 GLIGWSVAIPTLLGVAVGIWLD 67 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444555566666666664
No 319
>PF02659 DUF204: Domain of unknown function DUF; InterPro: IPR003810 Uncharacterised domain in proteins of unknown function.
Probab=35.34 E-value=1.2e+02 Score=19.51 Aligned_cols=30 Identities=13% Similarity=0.131 Sum_probs=16.6
Q ss_pred HHHHHHhhhhhhhhhHHHhhhccchhHHHH
Q 045073 205 MFLVALFATVPGYWFTVFLIDRIGRFIIQL 234 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~ 234 (402)
......+...+|..++.++.++++++.-.+
T Consensus 29 ig~~~~~~~~~G~~~G~~~~~~~~~~~~~i 58 (67)
T PF02659_consen 29 IGIFQFIMPLLGLLLGRRLGRFIGSYAEWI 58 (67)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455555555556666666666554333
No 320
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=35.23 E-value=77 Score=24.34 Aligned_cols=22 Identities=9% Similarity=0.066 Sum_probs=16.7
Q ss_pred cccccccchhhhhhhHHHHHHH
Q 045073 300 PAELFPARLRSTCHGISAAAGK 321 (402)
Q Consensus 300 ~~e~~p~~~r~~~~~~~~~~~~ 321 (402)
+.|++|+..|..+.+.+.....
T Consensus 58 LkDm~Pp~~R~~i~~~~s~t~s 79 (145)
T TIGR00986 58 LKDIVPPTTRGWIYHKYSTTTN 79 (145)
T ss_pred HHhhCCHHHHHHHHHHHHHHHH
Confidence 3789999999987776665544
No 321
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=33.33 E-value=2.5e+02 Score=28.54 Aligned_cols=23 Identities=17% Similarity=0.326 Sum_probs=16.7
Q ss_pred HHHHHHhhhhhhhhhHHHhhhcc
Q 045073 205 MFLVALFATVPGYWFTVFLIDRI 227 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr~ 227 (402)
...+..+.++.+.++.-.+.|+.
T Consensus 162 ~sl~l~i~~l~~p~~~q~viD~V 184 (709)
T COG2274 162 ASLLLQLLALATPLFSQIVIDKV 184 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Confidence 45555666677777888899986
No 322
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=32.77 E-value=1e+02 Score=23.66 Aligned_cols=23 Identities=13% Similarity=0.122 Sum_probs=17.5
Q ss_pred hhhhccCcccchhHHHHHHHHHH
Q 045073 8 IMSEYANKRTRGAFIAAVFAMQG 30 (402)
Q Consensus 8 ~i~e~~~~~~Rg~~~~~~~~~~~ 30 (402)
-+.|++|+..|..+...+.....
T Consensus 57 ALkDm~Pp~~R~~i~~~~s~t~s 79 (145)
T TIGR00986 57 ALKDIVPPTTRGWIYHKYSTTTN 79 (145)
T ss_pred HHHhhCCHHHHHHHHHHHHHHHH
Confidence 36799999999988877665443
No 323
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=32.25 E-value=1.2e+02 Score=19.41 Aligned_cols=30 Identities=13% Similarity=0.187 Sum_probs=17.7
Q ss_pred CCchhHHHHHHhHHHH----HHHHHHHhhccCCc
Q 045073 68 GDYLWRIVLMFGAVPA----ALTYYWRMKMPETA 97 (402)
Q Consensus 68 ~~~~Wr~~f~~~~i~~----~~~~~~~~~~pesp 97 (402)
+..-+|..|.+..+.. ++-+++++.+|+.|
T Consensus 27 d~~~vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 27 DPTLVRLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred CHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 4455788887755432 22344556688765
No 324
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=30.21 E-value=22 Score=33.81 Aligned_cols=18 Identities=33% Similarity=0.366 Sum_probs=8.5
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 045073 230 FIIQLGGFLLMSICMAIL 247 (402)
Q Consensus 230 r~~~~~~~~~~~~~~~~~ 247 (402)
|..++.+.+.-++.+.+.
T Consensus 397 ~~~~lta~l~PGivf~~~ 414 (628)
T KOG1278|consen 397 RNAILTAFLFPGIVFAIF 414 (628)
T ss_pred hhHHhhhhhcchHHHHHH
Confidence 445555555444444433
No 325
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=29.13 E-value=28 Score=26.41 Aligned_cols=16 Identities=31% Similarity=0.314 Sum_probs=7.3
Q ss_pred HHHHHHhHHHHHHHHH
Q 045073 73 RIVLMFGAVPAALTYY 88 (402)
Q Consensus 73 r~~f~~~~i~~~~~~~ 88 (402)
||++++.+|+++++++
T Consensus 1 RW~l~~iii~~i~l~~ 16 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFL 16 (130)
T ss_pred CeeeHHHHHHHHHHHH
Confidence 4555554444444333
No 326
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=27.80 E-value=4e+02 Score=23.03 Aligned_cols=25 Identities=4% Similarity=-0.185 Sum_probs=15.6
Q ss_pred hhHHHHHHhHHHHHHHHHHHhhccC
Q 045073 71 LWRIVLMFGAVPAALTYYWRMKMPE 95 (402)
Q Consensus 71 ~Wr~~f~~~~i~~~~~~~~~~~~pe 95 (402)
...+.-+++.+..++...++.+++.
T Consensus 113 ~~~~Ln~~G~~l~~~~~~~f~fik~ 137 (254)
T PF07857_consen 113 SSPWLNYIGVALVLVSGIIFSFIKS 137 (254)
T ss_pred chhHHHHHHHHHHHHHHHheeeecC
Confidence 3555566777777777666656543
No 327
>TIGR02185 Trep_Strep conserved hypothetical integral membrane protein TIGR02185. This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C-terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae R6.
Probab=27.70 E-value=2.5e+02 Score=22.90 Aligned_cols=27 Identities=7% Similarity=-0.032 Sum_probs=16.4
Q ss_pred HHHHHHhhhhhhhhhHHHhhhccchhH
Q 045073 205 MFLVALFATVPGYWFTVFLIDRIGRFI 231 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr~grr~ 231 (402)
...+..+..++++++++++..|+=||.
T Consensus 160 ~~~~~~~~t~v~~~iG~~iG~kllkKH 186 (189)
T TIGR02185 160 WAVIMIVLTAVAGIAGVLIGKKLLKKH 186 (189)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344455566666667777776665553
No 328
>TIGR00145 FTR1 family protein. A characterized member from yeast acts as oxidase-coupled high affinity iron transporter. Note that the apparent member from E. coli K12-MG1655 has a frameshift by homology with member sequences from other species.
Probab=27.57 E-value=4.3e+02 Score=23.29 Aligned_cols=26 Identities=15% Similarity=0.013 Sum_probs=13.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045073 20 AFIAAVFAMQGMGILFAGVISLIFSG 45 (402)
Q Consensus 20 ~~~~~~~~~~~lG~~~~~~~~~~l~~ 45 (402)
+.......+...|.+++-.++..+..
T Consensus 36 ~~~~~V~~G~~~gl~~s~~~a~~~~~ 61 (283)
T TIGR00145 36 RLRGWVWVGVLAGFAACLAIGIGVIG 61 (283)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455556666666555555543
No 329
>COG2119 Predicted membrane protein [Function unknown]
Probab=26.27 E-value=2e+02 Score=23.31 Aligned_cols=35 Identities=14% Similarity=0.201 Sum_probs=26.9
Q ss_pred HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073 205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL 239 (402)
Q Consensus 205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~ 239 (402)
......+++.++...+.++++|+..|.+...+.++
T Consensus 139 t~lg~~l~s~laVl~G~~ia~ki~~r~l~~~aall 173 (190)
T COG2119 139 TTLGMILASVLAVLLGKLIAGKLPERLLRFIAALL 173 (190)
T ss_pred hHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHH
Confidence 44555677778888899999999999888877443
No 330
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=26.18 E-value=5.2e+02 Score=23.80 Aligned_cols=29 Identities=10% Similarity=0.309 Sum_probs=18.7
Q ss_pred hccCcccchhHHHHH-HHHHHHHHHHHHHHH
Q 045073 11 EYANKRTRGAFIAAV-FAMQGMGILFAGVIS 40 (402)
Q Consensus 11 e~~~~~~Rg~~~~~~-~~~~~lG~~~~~~~~ 40 (402)
|+.|.++ ....+.. ....+.|.++||.++
T Consensus 48 DYvP~~~-~vlfghhf~sIAGaGPI~GPi~a 77 (376)
T PF02554_consen 48 DYVPTNK-WVLFGHHFASIAGAGPIVGPILA 77 (376)
T ss_pred CCCCCch-HHhhHHHHHHHhccccchHHHHH
Confidence 5666544 4555543 344568889999888
No 331
>PF01405 PsbT: Photosystem II reaction centre T protein; InterPro: IPR001743 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbT found in PSII, which is thought to be associated with the D1 (PsbA) - D2 (PsbD) heterodimer. PsbT may be involved in the formation and/or stabilisation of dimeric PSII complexes, because in the absence of this protein dimeric PSII complexes were found to be less abundant. Furthermore, although PsbT does not confer photo-protection, it is required for the efficient recovery of photo-damaged PSII [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3BZ1_T 1S5L_t 2AXT_t 3KZI_T 3PRQ_T 3BZ2_T 3PRR_T 4FBY_g 3A0H_t 3A0B_T ....
Probab=25.54 E-value=1.2e+02 Score=16.08 Aligned_cols=11 Identities=18% Similarity=0.507 Sum_probs=3.8
Q ss_pred HHHhhccCCch
Q 045073 88 YWRMKMPETAR 98 (402)
Q Consensus 88 ~~~~~~pesp~ 98 (402)
+...+..|.||
T Consensus 18 ffAI~FRePPr 28 (29)
T PF01405_consen 18 FFAIFFREPPR 28 (29)
T ss_dssp HHHHHSS----
T ss_pred HhhhhccCCCC
Confidence 33446788875
No 332
>PF08611 DUF1774: Fungal protein of unknown function (DUF1774); InterPro: IPR013920 This is a fungal protein of unknown function.
Probab=24.13 E-value=2.7e+02 Score=19.88 Aligned_cols=21 Identities=19% Similarity=0.218 Sum_probs=13.4
Q ss_pred cchhhHHHHHHHHHHHhhhee
Q 045073 341 QIKQSIITLAVVNFLGFLCSF 361 (402)
Q Consensus 341 ~~~~~~~~~~~~~~i~~i~~~ 361 (402)
.|--+|.+++++.+.+.....
T Consensus 51 QWIFAFvI~avlfv~sl~vav 71 (97)
T PF08611_consen 51 QWIFAFVIAAVLFVLSLVVAV 71 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 566677777777666655543
No 333
>PRK11875 psbT photosystem II reaction center protein T; Reviewed
Probab=23.24 E-value=1.4e+02 Score=16.04 Aligned_cols=10 Identities=0% Similarity=0.245 Sum_probs=6.8
Q ss_pred HhhccCCchh
Q 045073 90 RMKMPETARY 99 (402)
Q Consensus 90 ~~~~pesp~~ 99 (402)
..+..|+|+.
T Consensus 20 AIfFRepPri 29 (31)
T PRK11875 20 AIAFRDPPKI 29 (31)
T ss_pred hhhccCCCCC
Confidence 3467888864
No 334
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=22.80 E-value=4e+02 Score=21.28 Aligned_cols=24 Identities=8% Similarity=0.007 Sum_probs=17.0
Q ss_pred hhHHHHHHhHHHHHHHHHHHhhcc
Q 045073 71 LWRIVLMFGAVPAALTYYWRMKMP 94 (402)
Q Consensus 71 ~Wr~~f~~~~i~~~~~~~~~~~~p 94 (402)
.+....+++++.+.+..++.-.++
T Consensus 56 ~~~f~~~ipgI~stlgm~mvN~V~ 79 (166)
T PF05255_consen 56 HVTFVDWIPGIFSTLGMFMVNSVS 79 (166)
T ss_pred cccceeeehHHHHHHHHHHhcccc
Confidence 577777888888888777654443
No 335
>COG3162 Predicted membrane protein [Function unknown]
Probab=22.74 E-value=2.9e+02 Score=19.71 Aligned_cols=29 Identities=7% Similarity=0.030 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 045073 153 LHLLGTTSTWFLLDIAFYTINLAQKDIYP 181 (402)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (402)
+-.+.+.+.++...+++-....|.|.++.
T Consensus 24 ~Fa~~ltl~flv~Y~~filLiaf~~~~l~ 52 (102)
T COG3162 24 RFAVPLTLIFLVVYFGFILLIAFAPGWLA 52 (102)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHhc
Confidence 34555555666655566555666665554
No 336
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=22.69 E-value=5.4e+02 Score=22.75 Aligned_cols=30 Identities=10% Similarity=-0.036 Sum_probs=17.4
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 045073 14 NKRTRGAFIAAVFAMQGMGILFAGVISLIF 43 (402)
Q Consensus 14 ~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l 43 (402)
+|.+|.++.++-......+.+.+...++.+
T Consensus 8 ~~~er~k~~~~G~~vl~ta~la~~s~~~a~ 37 (301)
T PF14362_consen 8 SPAERNKYAGIGAAVLFTALLAGLSGGYAL 37 (301)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 667888888876555544444443333333
No 337
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=22.32 E-value=3.6e+02 Score=25.82 Aligned_cols=10 Identities=20% Similarity=0.165 Sum_probs=5.5
Q ss_pred HhhhccchhH
Q 045073 222 FLIDRIGRFI 231 (402)
Q Consensus 222 ~l~dr~grr~ 231 (402)
.+..|+++|+
T Consensus 106 ~l~k~l~~~~ 115 (465)
T PF03606_consen 106 LLIKPLKGKK 115 (465)
T ss_pred HHHHHhcCCc
Confidence 4556665553
No 338
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=22.15 E-value=3.1e+02 Score=19.80 Aligned_cols=15 Identities=7% Similarity=-0.164 Sum_probs=9.4
Q ss_pred hhhccchhHHHHHHH
Q 045073 223 LIDRIGRFIIQLGGF 237 (402)
Q Consensus 223 l~dr~grr~~~~~~~ 237 (402)
+-+|+.+|+......
T Consensus 82 ~~er~~~~~~~a~~l 96 (113)
T PF13536_consen 82 FKERLSPRRWLAILL 96 (113)
T ss_pred hcCCCCHHHHHHHHH
Confidence 347888887665443
No 339
>PRK11715 inner membrane protein; Provisional
Probab=22.11 E-value=6.2e+02 Score=24.00 Aligned_cols=19 Identities=5% Similarity=0.038 Sum_probs=10.3
Q ss_pred cccccccccchhhhhhhHH
Q 045073 298 IVPAELFPARLRSTCHGIS 316 (402)
Q Consensus 298 ~~~~e~~p~~~r~~~~~~~ 316 (402)
.|+.-+.....|+..++..
T Consensus 374 ~Y~~~vl~~~k~g~~~~~~ 392 (436)
T PRK11715 374 FYLSAVLRSWKRGLLFAAA 392 (436)
T ss_pred HHHHHHHhcchHHHHHHHH
Confidence 3455555656666654433
No 340
>PRK15015 carbon starvation protein A; Provisional
Probab=21.48 E-value=8.5e+02 Score=24.57 Aligned_cols=32 Identities=22% Similarity=0.294 Sum_probs=22.7
Q ss_pred hhccCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 045073 10 SEYANKRTRGAFIAAVFAMQGMGILFAGVISL 41 (402)
Q Consensus 10 ~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~ 41 (402)
.|+.|.+++-...-=+....+.|.++||.++.
T Consensus 78 ~DYvPt~k~VLfGHHFasIAGAGPivGPvlAa 109 (701)
T PRK15015 78 LDYVPTDKKVLFGHHFAAIAGAGPLVGPVLAA 109 (701)
T ss_pred CCcCcCCccchhHHHHHHHhccCccHHHHHHH
Confidence 36778777755554555666788899998885
No 341
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=21.18 E-value=4.8e+02 Score=24.68 Aligned_cols=18 Identities=6% Similarity=0.001 Sum_probs=9.8
Q ss_pred cccccccccchhhhhhhH
Q 045073 298 IVPAELFPARLRSTCHGI 315 (402)
Q Consensus 298 ~~~~e~~p~~~r~~~~~~ 315 (402)
.|+.-++....|+..++.
T Consensus 368 ~Y~~~vl~~~k~~~~~~~ 385 (430)
T PF06123_consen 368 LYLSSVLKSWKRGLIFAG 385 (430)
T ss_pred HHHHHHHhcchHHHHHHH
Confidence 345555665666655443
No 342
>CHL00031 psbT photosystem II protein T
Probab=20.57 E-value=1.7e+02 Score=16.01 Aligned_cols=11 Identities=9% Similarity=0.259 Sum_probs=7.5
Q ss_pred HHhhccCCchh
Q 045073 89 WRMKMPETARY 99 (402)
Q Consensus 89 ~~~~~pesp~~ 99 (402)
...+..|.||.
T Consensus 19 FAI~FRePPri 29 (33)
T CHL00031 19 FAIFFREPPKV 29 (33)
T ss_pred HhheecCCCCC
Confidence 33467898875
No 343
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=20.04 E-value=35 Score=30.41 Aligned_cols=15 Identities=27% Similarity=0.525 Sum_probs=0.0
Q ss_pred ccccccccccccccch
Q 045073 293 NSTTFIVPAELFPARL 308 (402)
Q Consensus 293 ~~~~~~~~~e~~p~~~ 308 (402)
.+..+.+.+. +|++.
T Consensus 15 q~s~~glas~-~p~~y 29 (309)
T PF01733_consen 15 QSSLFGLASL-FPPKY 29 (309)
T ss_dssp ----------------
T ss_pred hccHHHHHhc-CCHHH
Confidence 3444555554 55544
Done!