BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045074
(108 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LZ06|GSTL3_ARATH Glutathione S-transferase L3 OS=Arabidopsis thaliana GN=GSTL3 PE=2
SV=1
Length = 235
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 51/63 (80%)
Query: 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYRS 60
VDIAYIPF+ERFQ L+E FK DITA RPKL+AWIEE+NK D Y TK DPK++VE ++
Sbjct: 173 VDIAYIPFIERFQTVLNELFKCDITAERPKLSAWIEEINKSDGYAQTKMDPKEIVEVFKK 232
Query: 61 RFV 63
+F+
Sbjct: 233 KFM 235
>sp|Q6NLB0|GSTL1_ARATH Glutathione S-transferase L1 OS=Arabidopsis thaliana GN=GSTL1 PE=2
SV=1
Length = 237
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYRS 60
VDIAYIPF+ERFQ+FL E FKY+I GRP LAAWIE++NK+ AY TK D + +V +++
Sbjct: 176 VDIAYIPFIERFQVFLDEVFKYEIIIGRPNLAAWIEQMNKMVAYTQTKTDSEYVVNYFK- 234
Query: 61 RFV 63
RF+
Sbjct: 235 RFM 237
>sp|Q9M2W2|GSTL2_ARATH Glutathione S-transferase L2, chloroplastic OS=Arabidopsis thaliana
GN=GSTL2 PE=2 SV=1
Length = 292
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 48/61 (78%)
Query: 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYRS 60
VD+AY PF+ERF++ LS+ DIT+GRP LA WI+E+NK++AY T+ DP++LVE Y+
Sbjct: 225 VDVAYAPFIERFRLILSDVMNVDITSGRPNLALWIQEMNKIEAYTETRQDPQELVERYKR 284
Query: 61 R 61
R
Sbjct: 285 R 285
>sp|Q8H8U5|IN21B_ORYSJ Protein IN2-1 homolog B OS=Oryza sativa subsp. japonica GN=GSTZ5
PE=2 SV=1
Length = 244
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 45/64 (70%)
Query: 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYRS 60
VDIAY+PF+ERFQIF S YDIT GRP L +IEE+NK+ AY TK DP+ L+E +
Sbjct: 180 VDIAYVPFIERFQIFFSGIKNYDITKGRPNLQKFIEEVNKIHAYTETKQDPQFLLEHTKK 239
Query: 61 RFVV 64
R +
Sbjct: 240 RLGI 243
>sp|A1XBB7|IN21B_ORYSI Protein IN2-1 homolog B OS=Oryza sativa subsp. indica GN=GSTZ5 PE=1
SV=1
Length = 244
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 45/64 (70%)
Query: 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYRS 60
VDIAY+PF+ERFQIF S YDIT GRP L +IEE+NK+ AY TK DP+ L+E +
Sbjct: 180 VDIAYVPFIERFQIFFSGIKNYDITKGRPNLQKFIEEVNKIHAYTETKQDPQFLLEHTKK 239
Query: 61 RFVV 64
R +
Sbjct: 240 RLGI 243
>sp|Q10N44|IN21A_ORYSJ Protein IN2-1 homolog A OS=Oryza sativa subsp. japonica
GN=Os03g0283200 PE=2 SV=1
Length = 243
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYRS 60
VDIAY+ +ER QI+ S KY+IT GRP L +IEE+N+++AY TK DP L++ ++
Sbjct: 179 VDIAYVTIIERIQIYYSHIRKYEITNGRPNLEKFIEEINRIEAYTQTKNDPLYLLDLAKT 238
Query: 61 RFVV 64
V
Sbjct: 239 HLKV 242
>sp|P49248|IN21_MAIZE Protein IN2-1 OS=Zea mays GN=IN2-1 PE=2 SV=1
Length = 243
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%)
Query: 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYRS 60
D+AY+ +ER QI+ S YDI GRP L +I+E+NK++AY TK DP L++ +S
Sbjct: 179 ADVAYVTILERVQIYYSHLRNYDIAQGRPNLQEFIDEMNKIEAYAQTKNDPLFLLDLAKS 238
Query: 61 RFVV 64
+
Sbjct: 239 HLKI 242
>sp|Q3MIB4|LONP2_RAT Lon protease homolog 2, peroxisomal OS=Rattus norvegicus GN=Lonp2
PE=1 SV=2
Length = 852
Score = 32.3 bits (72), Expect = 0.93, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 15/81 (18%)
Query: 11 RFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVE----FYRSRFVVQF 66
RFQI + +P A +E+L++L+ + +T ++L E FYR + VQ
Sbjct: 107 RFQIV-------QVLKEKPYPVAEVEQLDRLEEFPNTCKTREELGELSEQFYR--YSVQL 157
Query: 67 VE--PSSEPAISRLRSALNQL 85
VE S PA+++LR L+ L
Sbjct: 158 VEMLDMSVPAVAKLRRLLDSL 178
>sp|Q2TAF8|LONP2_XENLA Lon protease homolog 2, peroxisomal OS=Xenopus laevis GN=lonp2 PE=2
SV=1
Length = 856
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 17/82 (20%)
Query: 11 RFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLV-----EFYRSRFVVQ 65
RFQI +I RP A +E+L++L+ S+K + K+ + +FY+ + VQ
Sbjct: 107 RFQI-------TEILKERPYPVAEVEQLDRLEQL-SSKEEFKEALGDLSEQFYK--YAVQ 156
Query: 66 FVE--PSSEPAISRLRSALNQL 85
V+ +S PA+++L+ LN L
Sbjct: 157 LVDMLDNSVPAVAKLKRLLNNL 178
>sp|Q9DBN5|LONP2_MOUSE Lon protease homolog 2, peroxisomal OS=Mus musculus GN=Lonp2 PE=2
SV=1
Length = 852
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 15/81 (18%)
Query: 11 RFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVE----FYRSRFVVQF 66
RFQI + +P A +E+L++L+ + + ++L E FYR + VQ
Sbjct: 107 RFQIV-------QVLKEKPYPVAEVEQLDRLEEFPNICKSREELGELSEQFYR--YAVQL 157
Query: 67 VE--PSSEPAISRLRSALNQL 85
VE S PA+++LR L+ L
Sbjct: 158 VEMLDMSVPAVAKLRRLLDNL 178
>sp|Q10656|EGL15_CAEEL Myoblast growth factor receptor egl-15 OS=Caenorhabditis elegans
GN=egl-15 PE=1 SV=1
Length = 1040
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 19/27 (70%)
Query: 10 ERFQIFLSEEFKYDITAGRPKLAAWIE 36
ER+++FL +E K+D K++A++E
Sbjct: 41 ERYEVFLGDEIKFDCQTAASKISAFVE 67
>sp|Q9ZRW8|GSTUJ_ARATH Glutathione S-transferase U19 OS=Arabidopsis thaliana GN=GSTU19
PE=2 SV=1
Length = 219
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 1 VDIAYIPFVERFQIFLSEEF-KYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEF-- 57
VDIA I F F + E+F + I + PKL AW+++ + ++ + DP+++ EF
Sbjct: 153 VDIALIGFYTWFPAY--EKFANFSIESEVPKLIAWVKKCLQRESVAKSLPDPEKVTEFVS 210
Query: 58 -YRSRFV 63
R +FV
Sbjct: 211 ELRKKFV 217
>sp|Q2RG43|PURA_MOOTA Adenylosuccinate synthetase OS=Moorella thermoacetica (strain ATCC
39073) GN=purA PE=3 SV=1
Length = 427
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 14/82 (17%)
Query: 21 KYDITAGRPKLAAWIE--------ELNKLDAYKSTKAD------PKQLVEFYRSRFVVQF 66
++ T GRP+ W++ E+N L TK D P ++ YR R V
Sbjct: 295 EFGTTTGRPRRCGWLDTVILRHAAEVNGLTGIALTKLDVLTGLDPLRICTSYRYRGTVGE 354
Query: 67 VEPSSEPAISRLRSALNQLVAW 88
P+S A+ +L W
Sbjct: 355 DFPASLKALEECEPVYEELPGW 376
>sp|P46430|GSTT1_MANSE Glutathione S-transferase 1 OS=Manduca sexta GN=GST1 PE=2 SV=1
Length = 217
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 29 PKLAAWIEELNKLDAYKSTKADPKQLVE 56
PKL+AW+E ++LD YK A L +
Sbjct: 182 PKLSAWLERCSQLDVYKKKNAPGNDLCK 209
>sp|Q6GFI4|RECX_STAAR Regulatory protein RecX OS=Staphylococcus aureus (strain MRSA252)
GN=recX PE=3 SV=1
Length = 272
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 14/83 (16%)
Query: 10 ERFQIFLSEEF----------KYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYR 59
ERF +FL E+F K+++ G+ AA + E+ K D Y+ Q + + +
Sbjct: 15 ERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKK 74
Query: 60 --SRFVVQFV--EPSSEPAISRL 78
+ V+Q++ E SE AIS +
Sbjct: 75 RTEKEVIQYLQKEEISEQAISEV 97
>sp|P66003|RECX_STAAN Regulatory protein RecX OS=Staphylococcus aureus (strain N315)
GN=recX PE=1 SV=1
Length = 272
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 14/83 (16%)
Query: 10 ERFQIFLSEEF----------KYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYR 59
ERF +FL E+F K+++ G+ AA + E+ K D Y+ Q + + +
Sbjct: 15 ERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKK 74
Query: 60 --SRFVVQFV--EPSSEPAISRL 78
+ V+Q++ E SE AIS +
Sbjct: 75 RTEKEVIQYLQKEEISEQAISEV 97
>sp|P66002|RECX_STAAM Regulatory protein RecX OS=Staphylococcus aureus (strain Mu50 /
ATCC 700699) GN=recX PE=1 SV=1
Length = 272
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 14/83 (16%)
Query: 10 ERFQIFLSEEF----------KYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYR 59
ERF +FL E+F K+++ G+ AA + E+ K D Y+ Q + + +
Sbjct: 15 ERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKK 74
Query: 60 --SRFVVQFV--EPSSEPAISRL 78
+ V+Q++ E SE AIS +
Sbjct: 75 RTEKEVIQYLQKEEISEQAISEV 97
>sp|Q2YU14|RECX_STAAB Regulatory protein RecX OS=Staphylococcus aureus (strain bovine
RF122 / ET3-1) GN=recX PE=3 SV=1
Length = 272
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 14/83 (16%)
Query: 10 ERFQIFLSEEF----------KYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYR 59
ERF +FL E+F K+++ G+ AA + E+ K D Y+ Q + + +
Sbjct: 15 ERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKK 74
Query: 60 --SRFVVQFV--EPSSEPAISRL 78
+ V+Q++ E SE AIS +
Sbjct: 75 RTEKEVIQYLQKEEISEQAISEV 97
>sp|A5IU39|RECX_STAA9 Regulatory protein RecX OS=Staphylococcus aureus (strain JH9)
GN=recX PE=3 SV=1
Length = 272
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 14/83 (16%)
Query: 10 ERFQIFLSEEF----------KYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYR 59
ERF +FL E+F K+++ G+ AA + E+ K D Y+ Q + + +
Sbjct: 15 ERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKK 74
Query: 60 --SRFVVQFV--EPSSEPAISRL 78
+ V+Q++ E SE AIS +
Sbjct: 75 RTEKEVIQYLQKEEISEQAISEV 97
>sp|A6U2X7|RECX_STAA2 Regulatory protein RecX OS=Staphylococcus aureus (strain JH1)
GN=recX PE=3 SV=1
Length = 272
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 14/83 (16%)
Query: 10 ERFQIFLSEEF----------KYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYR 59
ERF +FL E+F K+++ G+ AA + E+ K D Y+ Q + + +
Sbjct: 15 ERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKK 74
Query: 60 --SRFVVQFV--EPSSEPAISRL 78
+ V+Q++ E SE AIS +
Sbjct: 75 RTEKEVIQYLQKEEISEQAISEV 97
>sp|A7X3Z1|RECX_STAA1 Regulatory protein RecX OS=Staphylococcus aureus (strain Mu3 /
ATCC 700698) GN=recX PE=3 SV=1
Length = 272
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 14/83 (16%)
Query: 10 ERFQIFLSEEF----------KYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYR 59
ERF +FL E+F K+++ G+ AA + E+ K D Y+ Q + + +
Sbjct: 15 ERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKK 74
Query: 60 --SRFVVQFV--EPSSEPAISRL 78
+ V+Q++ E SE AIS +
Sbjct: 75 RTEKEVIQYLQKEEISEQAISEV 97
>sp|Q8NVU3|RECX_STAAW Regulatory protein RecX OS=Staphylococcus aureus (strain MW2)
GN=recX PE=3 SV=1
Length = 272
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 14/83 (16%)
Query: 10 ERFQIFLSEEF----------KYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYR 59
ERF +FL E+F K+++ G+ AA + E+ K D Y+ Q + + +
Sbjct: 15 ERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKK 74
Query: 60 --SRFVVQFV--EPSSEPAISRL 78
+ V+Q++ E SE AIS +
Sbjct: 75 RTEKEVIQYLQKEEISEQAISEV 97
>sp|A8YY45|RECX_STAAT Regulatory protein RecX OS=Staphylococcus aureus (strain USA300 /
TCH1516) GN=recX PE=3 SV=1
Length = 272
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 14/83 (16%)
Query: 10 ERFQIFLSEEF----------KYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYR 59
ERF +FL E+F K+++ G+ AA + E+ K D Y+ Q + + +
Sbjct: 15 ERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKK 74
Query: 60 --SRFVVQFV--EPSSEPAISRL 78
+ V+Q++ E SE AIS +
Sbjct: 75 RTEKEVIQYLQKEEISEQAISEV 97
>sp|Q6G861|RECX_STAAS Regulatory protein RecX OS=Staphylococcus aureus (strain MSSA476)
GN=recX PE=3 SV=1
Length = 272
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 14/83 (16%)
Query: 10 ERFQIFLSEEF----------KYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYR 59
ERF +FL E+F K+++ G+ AA + E+ K D Y+ Q + + +
Sbjct: 15 ERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKK 74
Query: 60 --SRFVVQFV--EPSSEPAISRL 78
+ V+Q++ E SE AIS +
Sbjct: 75 RTEKEVIQYLQKEEISEQAISEV 97
>sp|A6QI55|RECX_STAAE Regulatory protein RecX OS=Staphylococcus aureus (strain Newman)
GN=recX PE=3 SV=1
Length = 272
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 14/83 (16%)
Query: 10 ERFQIFLSEEF----------KYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYR 59
ERF +FL E+F K+++ G+ AA + E+ K D Y+ Q + + +
Sbjct: 15 ERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKK 74
Query: 60 --SRFVVQFV--EPSSEPAISRL 78
+ V+Q++ E SE AIS +
Sbjct: 75 RTEKEVIQYLQKEEISEQAISEV 97
>sp|Q5HEQ1|RECX_STAAC Regulatory protein RecX OS=Staphylococcus aureus (strain COL)
GN=recX PE=3 SV=1
Length = 272
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 14/83 (16%)
Query: 10 ERFQIFLSEEF----------KYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYR 59
ERF +FL E+F K+++ G+ AA + E+ K D Y+ Q + + +
Sbjct: 15 ERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKK 74
Query: 60 --SRFVVQFV--EPSSEPAISRL 78
+ V+Q++ E SE AIS +
Sbjct: 75 RTEKEVIQYLQKEEISEQAISEV 97
>sp|Q2G2G9|RECX_STAA8 Regulatory protein RecX OS=Staphylococcus aureus (strain NCTC
8325) GN=recX PE=3 SV=1
Length = 272
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 14/83 (16%)
Query: 10 ERFQIFLSEEF----------KYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYR 59
ERF +FL E+F K+++ G+ AA + E+ K D Y+ Q + + +
Sbjct: 15 ERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKK 74
Query: 60 --SRFVVQFV--EPSSEPAISRL 78
+ V+Q++ E SE AIS +
Sbjct: 75 RTEKEVIQYLQKEEISEQAISEV 97
>sp|Q2FFM2|RECX_STAA3 Regulatory protein RecX OS=Staphylococcus aureus (strain USA300)
GN=recX PE=3 SV=1
Length = 272
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 14/83 (16%)
Query: 10 ERFQIFLSEEF----------KYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYR 59
ERF +FL E+F K+++ G+ AA + E+ K D Y+ Q + + +
Sbjct: 15 ERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKK 74
Query: 60 --SRFVVQFV--EPSSEPAISRL 78
+ V+Q++ E SE AIS +
Sbjct: 75 RTEKEVIQYLQKEEISEQAISEV 97
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.139 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,754,905
Number of Sequences: 539616
Number of extensions: 1117009
Number of successful extensions: 4217
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 4207
Number of HSP's gapped (non-prelim): 35
length of query: 108
length of database: 191,569,459
effective HSP length: 76
effective length of query: 32
effective length of database: 150,558,643
effective search space: 4817876576
effective search space used: 4817876576
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)