Query 045074
Match_columns 108
No_of_seqs 102 out of 549
Neff 5.3
Searched_HMMs 46136
Date Fri Mar 29 09:35:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045074.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045074hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0406 Glutathione S-transfer 99.1 5.2E-11 1.1E-15 92.8 4.6 66 1-66 160-227 (231)
2 cd03203 GST_C_Lambda GST_C fam 98.9 7.9E-10 1.7E-14 76.1 2.1 58 1-58 62-119 (120)
3 cd03184 GST_C_Omega GST_C fami 98.6 3.5E-08 7.5E-13 67.6 3.4 60 1-61 64-124 (124)
4 TIGR00862 O-ClC intracellular 98.6 5.2E-08 1.1E-12 75.6 3.9 65 1-65 171-235 (236)
5 cd03201 GST_C_DHAR GST_C famil 98.5 7.1E-08 1.5E-12 67.1 2.7 59 1-59 61-119 (121)
6 cd03190 GST_C_ECM4_like GST_C 98.5 5.3E-08 1.2E-12 68.9 1.8 65 1-65 67-133 (142)
7 cd03185 GST_C_Tau GST_C family 98.2 9.6E-07 2.1E-11 59.5 2.7 59 1-60 65-125 (126)
8 cd03198 GST_C_CLIC GST_C famil 98.2 8.1E-07 1.8E-11 64.0 2.0 59 1-59 75-133 (134)
9 PLN02378 glutathione S-transfe 97.6 2.5E-05 5.5E-10 58.2 2.0 56 1-56 150-205 (213)
10 PLN02817 glutathione dehydroge 97.5 8.4E-05 1.8E-09 58.3 2.9 60 1-60 202-261 (265)
11 cd03186 GST_C_SspA GST_N famil 97.4 5.4E-05 1.2E-09 49.9 0.9 42 1-47 65-106 (107)
12 PRK09481 sspA stringent starva 97.1 0.00024 5.1E-09 52.6 1.3 49 1-54 157-206 (211)
13 cd03188 GST_C_Beta GST_C famil 96.8 0.0003 6.6E-09 46.1 0.2 42 1-48 73-114 (114)
14 cd03178 GST_C_Ure2p_like GST_C 96.8 0.00075 1.6E-08 44.5 1.9 43 1-48 70-112 (113)
15 cd03196 GST_C_5 GST_C family, 96.8 0.00048 1E-08 46.9 0.9 45 1-48 71-115 (115)
16 cd03187 GST_C_Phi GST_C family 96.8 0.00038 8.3E-09 46.0 0.2 44 1-48 75-118 (118)
17 PF00043 GST_C: Glutathione S- 96.7 0.00038 8.3E-09 44.5 0.1 37 1-42 58-95 (95)
18 cd03209 GST_C_Mu GST_C family, 96.7 0.00041 8.9E-09 47.1 0.1 46 1-51 65-110 (121)
19 cd03191 GST_C_Zeta GST_C famil 96.7 0.00069 1.5E-08 45.5 1.0 44 1-50 76-119 (121)
20 cd03210 GST_C_Pi GST_C family, 96.6 0.00046 9.9E-09 47.4 -0.1 45 1-50 68-112 (126)
21 cd03177 GST_C_Delta_Epsilon GS 96.6 0.00076 1.7E-08 45.3 0.6 43 1-48 68-110 (118)
22 TIGR01262 maiA maleylacetoacet 96.3 0.0012 2.6E-08 48.1 0.5 44 1-50 161-204 (210)
23 PTZ00057 glutathione s-transfe 96.3 0.00084 1.8E-08 49.5 -0.4 45 1-50 155-199 (205)
24 cd03207 GST_C_8 GST_C family, 96.3 0.0014 3E-08 42.8 0.6 42 1-49 60-101 (103)
25 PRK10357 putative glutathione 96.3 0.0015 3.3E-08 47.5 0.8 48 1-51 154-201 (202)
26 cd03183 GST_C_Theta GST_C fami 96.2 0.0014 3.1E-08 44.2 0.4 43 1-48 76-120 (126)
27 PLN02395 glutathione S-transfe 96.1 0.0015 3.3E-08 47.8 0.1 46 1-49 164-209 (215)
28 PRK10542 glutathionine S-trans 96.1 0.0013 2.8E-08 47.6 -0.3 44 1-50 154-197 (201)
29 cd03181 GST_C_EFB1gamma GST_C 96.1 0.0013 2.8E-08 44.0 -0.5 48 1-51 70-117 (123)
30 PLN02473 glutathione S-transfe 96.0 0.0015 3.2E-08 47.9 -0.3 46 1-49 165-210 (214)
31 PRK11752 putative S-transferas 95.8 0.0023 5E-08 49.6 -0.0 50 1-50 208-258 (264)
32 cd03182 GST_C_GTT2_like GST_C 95.8 0.0026 5.5E-08 42.1 0.2 39 1-44 79-117 (117)
33 PRK13972 GSH-dependent disulfi 95.8 0.0015 3.3E-08 48.2 -1.1 44 1-50 162-205 (215)
34 cd03195 GST_C_4 GST_C family, 95.8 0.0027 5.9E-08 43.0 0.2 40 1-48 72-111 (114)
35 cd03204 GST_C_GDAP1 GST_C fami 95.6 0.0043 9.3E-08 43.2 0.8 39 1-44 69-111 (111)
36 cd03194 GST_C_3 GST_C family, 95.5 0.0035 7.5E-08 42.7 -0.1 40 1-48 73-112 (114)
37 cd03208 GST_C_Alpha GST_C fami 95.5 0.004 8.6E-08 43.8 0.1 45 1-50 71-115 (137)
38 PF13410 GST_C_2: Glutathione 95.0 0.0046 1E-07 37.7 -0.7 34 1-37 36-69 (69)
39 cd03180 GST_C_2 GST_C family, 95.0 0.0085 1.8E-07 38.9 0.5 38 1-44 73-110 (110)
40 PRK15113 glutathione S-transfe 94.6 0.0071 1.5E-07 44.8 -0.6 45 1-53 167-211 (214)
41 cd03202 GST_C_etherase_LigE GS 94.3 0.021 4.5E-07 39.3 1.2 37 1-41 88-124 (124)
42 cd03206 GST_C_7 GST_C family, 93.8 0.021 4.5E-07 37.2 0.4 38 1-44 63-100 (100)
43 cd00299 GST_C_family Glutathio 93.5 0.021 4.5E-07 35.7 -0.0 35 1-38 66-100 (100)
44 PRK10387 glutaredoxin 2; Provi 90.6 0.035 7.6E-07 40.3 -1.8 38 1-45 171-208 (210)
45 cd03189 GST_C_GTT1_like GST_C 89.6 0.14 3.1E-06 33.8 0.8 36 1-42 84-119 (119)
46 COG0625 Gst Glutathione S-tran 89.4 0.12 2.6E-06 37.8 0.3 39 1-45 161-199 (211)
47 cd03197 GST_C_mPGES2 GST_C fam 88.0 0.19 4E-06 37.1 0.5 35 1-40 110-145 (149)
48 PF14497 GST_C_3: Glutathione 87.8 0.12 2.6E-06 33.6 -0.6 17 24-40 83-99 (99)
49 cd03205 GST_C_6 GST_C family, 86.1 0.18 3.9E-06 32.7 -0.5 35 1-38 64-98 (98)
50 cd03193 GST_C_Metaxin GST_C fa 84.0 0.15 3.3E-06 32.3 -1.5 39 1-39 49-88 (88)
51 KOG4420 Uncharacterized conser 83.7 0.67 1.4E-05 37.9 1.7 59 1-60 239-297 (325)
52 KOG1422 Intracellular Cl- chan 80.2 2.2 4.8E-05 33.5 3.3 60 1-60 156-215 (221)
53 cd03200 GST_C_JTV1 GST_C famil 79.3 0.59 1.3E-05 30.9 -0.0 16 26-41 81-96 (96)
54 TIGR02182 GRXB Glutaredoxin, G 76.7 0.31 6.8E-06 36.1 -2.2 37 1-45 170-207 (209)
55 PLN02907 glutamate-tRNA ligase 73.4 1.3 2.7E-05 39.9 0.4 40 1-43 120-159 (722)
56 KOG0867 Glutathione S-transfer 64.8 2.6 5.7E-05 32.0 0.5 24 25-48 184-207 (226)
57 COG2179 Predicted hydrolase of 47.1 40 0.00087 25.7 4.3 60 26-85 46-106 (175)
58 PF02899 Phage_int_SAM_1: Phag 43.0 75 0.0016 19.2 6.2 59 29-91 24-82 (84)
59 KOG3802 Transcription factor O 34.3 52 0.0011 28.0 3.5 59 9-70 246-304 (398)
60 KOG1695 Glutathione S-transfer 33.7 24 0.00052 27.1 1.3 25 26-50 176-200 (206)
61 PF10414 CysG_dimeriser: Siroh 33.4 26 0.00056 21.2 1.2 38 31-68 3-41 (60)
62 cd03211 GST_C_Metaxin2 GST_C f 33.3 7 0.00015 27.0 -1.5 13 26-38 113-125 (126)
63 cd03212 GST_C_Metaxin1_3 GST_C 30.6 8.4 0.00018 27.1 -1.5 15 26-40 120-134 (137)
64 PF14834 GST_C_4: Glutathione 29.7 14 0.00029 26.5 -0.6 38 2-47 74-111 (117)
65 cd03179 GST_C_1 GST_C family, 25.5 40 0.00086 21.1 1.1 14 26-39 92-105 (105)
66 TIGR03044 PS_II_psb27 photosys 25.0 1.1E+02 0.0023 22.5 3.4 38 51-90 69-106 (135)
67 PTZ00151 translationally contr 24.8 2.1E+02 0.0046 21.6 5.1 45 47-91 81-127 (172)
68 PF13326 PSII_Pbs27: Photosyst 23.0 53 0.0011 23.9 1.5 39 51-91 81-119 (145)
69 PF13543 KSR1-SAM: SAM like do 22.6 2.1E+02 0.0046 20.6 4.5 52 27-85 65-128 (129)
70 KOG1431 GDP-L-fucose synthetas 21.9 60 0.0013 26.5 1.7 21 72-92 289-309 (315)
71 cd03192 GST_C_Sigma_like GST_C 21.7 40 0.00087 21.3 0.6 13 26-38 92-104 (104)
72 cd03199 GST_C_GRX2 GST_C famil 20.5 30 0.00065 24.8 -0.2 16 29-44 110-125 (128)
73 PLN00064 photosystem II protei 20.4 1.4E+02 0.003 22.6 3.3 48 41-90 87-135 (166)
No 1
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.13 E-value=5.2e-11 Score=92.84 Aligned_cols=66 Identities=29% Similarity=0.364 Sum_probs=56.9
Q ss_pred CcEEeehhHHHHHHHhhhcccccc--CCCCccHHHHHHHHcCCcchhhcCCChHHHHHHHHHhhhhhc
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDI--TAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYRSRFVVQF 66 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l--~ee~PkL~aW~eaM~e~PaVKks~~~~Ekl~ef~k~~~~~~~ 66 (108)
+||++||||+|+.......++.++ .+++|+|.+|+++|.++|+|++++++.|++.+|++.++++..
T Consensus 160 vDi~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~~~~V~~~~p~~e~~~e~~~~~~~~~~ 227 (231)
T KOG0406|consen 160 VDIAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKEDEAVKAVLPDSEKVVEFMKKYRQGSP 227 (231)
T ss_pred hhhhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhcChhHHhhcCCHHHHHHHHHHHHHhcc
Confidence 699999999998877644554443 456799999999999999999999999999999999998753
No 2
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=98.88 E-value=7.9e-10 Score=76.12 Aligned_cols=58 Identities=69% Similarity=1.233 Sum_probs=48.4
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcCCChHHHHHHH
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFY 58 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~~~~Ekl~ef~ 58 (108)
+|++++|+++|+........++++.+++|+|.+|.++|.++|+|+++.++.|++.+++
T Consensus 62 ADi~l~~~~~~~~~~~~~~~~~~~~~~~P~l~~W~~~~~~rp~~~~~~~~~~~~~~~~ 119 (120)
T cd03203 62 VDIAYVPFIERFQIFLSELFNYDITEGRPNLAAWIEEMNKIEAYTQTKQDPQELLDLA 119 (120)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccccCcHHHHHHHHHhcchHHHhHcCCHHHHHhhh
Confidence 5999999999987632123356655678999999999999999999999999999875
No 3
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=98.61 E-value=3.5e-08 Score=67.62 Aligned_cols=60 Identities=25% Similarity=0.408 Sum_probs=49.1
Q ss_pred CcEEeehhHHHHHHHhhhcccccc-CCCCccHHHHHHHHcCCcchhhcCCChHHHHHHHHHh
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDI-TAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYRSR 61 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l-~ee~PkL~aW~eaM~e~PaVKks~~~~Ekl~ef~k~~ 61 (108)
+|++++|++.++..+.... |... .+++|+|.+|.++|.++|+|++++++.+.+.++++.+
T Consensus 64 aDi~~~~~~~~~~~~~~~~-~~~~~~~~~p~l~~w~~r~~~~p~v~~~~~~~~~~~~~~~~~ 124 (124)
T cd03184 64 VDYMIWPWFERLEALKLLL-GYEFPLDRFPKLKKWMDAMKEDPAVQAFYTDTEIHAEFLKSY 124 (124)
T ss_pred HHHHhhHHHHHHHHHHhhc-cccCCcccChHHHHHHHHhccChHHHHHhCCHHHHHHHHhcC
Confidence 5999999999988765211 2222 3567999999999999999999999999999998864
No 4
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=98.57 E-value=5.2e-08 Score=75.58 Aligned_cols=65 Identities=14% Similarity=0.173 Sum_probs=56.8
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcCCChHHHHHHHHHhhhhh
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYRSRFVVQ 65 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~~~~Ekl~ef~k~~~~~~ 65 (108)
+|++++|++.++.++..+..|+++++++|+|.+|+++|.++|+++++.++.+.+..++....+|.
T Consensus 171 aD~~l~p~l~~l~~~~~~~~~~~i~~~~p~l~~w~~~~~~~~sf~~t~p~~~~i~~~~~~~~~~~ 235 (236)
T TIGR00862 171 ADCNLLPKLHIVKVVAKKYRNFDIPAEFTGVWRYLSNAYAREEFTNTCPDDKEIELAYADVAKRL 235 (236)
T ss_pred hhHHHHHHHHHHHHHHHHHhCcCccccCchHHHHHHHHhccchHHhhCCChHHHHHHHHHHhhcC
Confidence 69999999999998643455888888899999999999999999999999999999988876553
No 5
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=98.50 E-value=7.1e-08 Score=67.10 Aligned_cols=59 Identities=15% Similarity=0.331 Sum_probs=47.3
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcCCChHHHHHHHH
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYR 59 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~~~~Ekl~ef~k 59 (108)
+|++++|++.++........++.+++++|+|.+|.++|.++|+|+++.+..+++.+.++
T Consensus 61 ADi~l~~~l~~l~~~~~~~~~~~~~~~~P~l~~w~~rl~~rps~~~t~~~~~~~~~~~~ 119 (121)
T cd03201 61 VDLSLAPKLYHLEIALGHYKNWSVPESLTSVKSYMKALFSRESFVKTKAEKEDVIAGWA 119 (121)
T ss_pred HhHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHCCchhhhcCCCHHHHHHHhc
Confidence 59999999988876422223444457789999999999999999999999888877664
No 6
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=98.49 E-value=5.3e-08 Score=68.85 Aligned_cols=65 Identities=17% Similarity=0.211 Sum_probs=51.8
Q ss_pred CcEEeehhHHHHHHHh-hhc-cccccCCCCccHHHHHHHHcCCcchhhcCCChHHHHHHHHHhhhhh
Q 045074 1 VDIAYIPFVERFQIFL-SEE-FKYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYRSRFVVQ 65 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~-~~~-~g~~l~ee~PkL~aW~eaM~e~PaVKks~~~~Ekl~ef~k~~~~~~ 65 (108)
+|++++|++.++..+. ... .+....+++|+|.+|.++|.++|+++++..+.+.+.+|++++++|+
T Consensus 67 ADi~l~~~l~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~P~~k~~~~~~~~~~~~~~~~~~~~ 133 (142)
T cd03190 67 ADIRLFTTLIRFDAVYVQHFKCNLKRIRDYPNLWNYLRRLYQNPGVAETTNFDHIKQHYYGSHFPLN 133 (142)
T ss_pred HHHHHHHHHHHHHHHhhhhcccccchhhhCchHHHHHHHHhcCchHhhhcCHHHHHHHHHhhcCCCC
Confidence 6999999998876532 111 1112234689999999999999999999999999999999998876
No 7
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=98.21 E-value=9.6e-07 Score=59.54 Aligned_cols=59 Identities=34% Similarity=0.490 Sum_probs=47.1
Q ss_pred CcEEeehhHHHHHHHhhhcccccc--CCCCccHHHHHHHHcCCcchhhcCCChHHHHHHHHH
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDI--TAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYRS 60 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l--~ee~PkL~aW~eaM~e~PaVKks~~~~Ekl~ef~k~ 60 (108)
+|++++|++.++..+.. ..+.++ .+++|++.+|.++|.++|+++++..+.+.+.+|+++
T Consensus 65 ADi~l~~~~~~~~~~~~-~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~~~~~~~~~ 125 (126)
T cd03185 65 VDIALGSFLGWFRAYEE-VGGVKLLDEEKTPLLAAWAERFLELEAVKEVLPDRDKLVEFAKA 125 (126)
T ss_pred HHHHHHHHHHHHHHHHH-HcCccccCcccCchHHHHHHHHHhccHHHHhCCCHHHHHHHHHh
Confidence 58999999888866542 113332 356799999999999999999999999999998765
No 8
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=98.18 E-value=8.1e-07 Score=63.97 Aligned_cols=59 Identities=12% Similarity=0.251 Sum_probs=47.1
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcCCChHHHHHHHH
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYR 59 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~~~~Ekl~ef~k 59 (108)
+|++++|++.++..+.....++++++++|+|.+|.++|.++|+++++++..+....+++
T Consensus 75 ADi~l~p~L~~~~~~~~~~~g~~i~~~~P~L~aw~~ri~aRPsfk~t~~~~~~i~~~~~ 133 (134)
T cd03198 75 ADCNLLPKLHIVKVVAKKYRNFEIPADLTGLWRYLKNAYQREEFTNTCPADQEIELAYK 133 (134)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCccccCHHHHHHHHHHHCCHHHHHHcCCHHHHHHHhc
Confidence 58899999888865432233666667789999999999999999999999877776653
No 9
>PLN02378 glutathione S-transferase DHAR1
Probab=97.65 E-value=2.5e-05 Score=58.20 Aligned_cols=56 Identities=21% Similarity=0.431 Sum_probs=42.5
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcCCChHHHHH
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVE 56 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~~~~Ekl~e 56 (108)
+|++++|++.++......+.++++.+++|+|.+|.++|.++|+++++++..+....
T Consensus 150 ADi~l~~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~rpa~~~~~~~~~~~~~ 205 (213)
T PLN02378 150 VDLSLAPKLYHLQVALGHFKSWSVPESFPHVHNYMKTLFSLDSFEKTKTEEKYVIS 205 (213)
T ss_pred hhHHHHHHHHHHHHHHHHhcCCCchhHhHHHHHHHHHHhcCCCeecccCChHHHHH
Confidence 69999999988765321222344456789999999999999999999887655443
No 10
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=97.47 E-value=8.4e-05 Score=58.30 Aligned_cols=60 Identities=15% Similarity=0.371 Sum_probs=46.4
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcCCChHHHHHHHHH
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYRS 60 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~~~~Ekl~ef~k~ 60 (108)
+|++++|++.++........+.++.+++|+|.+|.++|.++|+++++.+..+.+.+.++.
T Consensus 202 ADi~l~p~L~~l~~~~~~~~~~~i~~~~P~L~~w~~ri~~rps~~~~~~~~~~~~~~~~~ 261 (265)
T PLN02817 202 ADLSLGPKLYHLEIALGHYKNWSVPDSLPFVKSYMKNIFSMESFVKTRALPEDVIAGWRP 261 (265)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHhcchhHhhcCCCHHHHHHHhHh
Confidence 599999998887653212334455577899999999999999999999987777666543
No 11
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=97.40 E-value=5.4e-05 Score=49.92 Aligned_cols=42 Identities=19% Similarity=0.382 Sum_probs=32.8
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhc
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKST 47 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks 47 (108)
+|++++|++.++..+ |.++++.+|+|.+|.++|.++|+++.+
T Consensus 65 aDi~~~~~~~~~~~~-----~~~~~~~~p~l~~w~~~~~~rpa~~~~ 106 (107)
T cd03186 65 VDCALAPLLWRLPAL-----GIELPKQAKPLKDYMERVFARDSFQKS 106 (107)
T ss_pred HHHHHHHHHHHHHHc-----CCCCcccchHHHHHHHHHHCCHHHHHh
Confidence 588999998655432 344445679999999999999999875
No 12
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=97.07 E-value=0.00024 Score=52.61 Aligned_cols=49 Identities=14% Similarity=0.384 Sum_probs=38.1
Q ss_pred CcEEeehhHHHHHHHhhhccccccC-CCCccHHHHHHHHcCCcchhhcCCChHHH
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDIT-AGRPKLAAWIEELNKLDAYKSTKADPKQL 54 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~-ee~PkL~aW~eaM~e~PaVKks~~~~Ekl 54 (108)
+|++++|++.++..+ ++++. +++|+|.+|.++|.++|+||+++.+.+.-
T Consensus 157 AD~~l~~~~~~~~~~-----~~~~~~~~~p~l~~w~~~~~~rp~~~~~~~~~~~~ 206 (211)
T PRK09481 157 VDCYLAPLLWRLPVL-----GIELSGPGAKELKGYMTRVFERDSFLASLTEAERE 206 (211)
T ss_pred HHHHHHHHHHHHHhc-----CCCCCCCCChhHHHHHHHHhccHHHHHHcCHHHHH
Confidence 588999998776543 33443 46799999999999999999998775543
No 13
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=96.84 E-value=0.0003 Score=46.10 Aligned_cols=42 Identities=17% Similarity=0.175 Sum_probs=31.5
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcC
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTK 48 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~ 48 (108)
+|++++|.+.++... +++ .+++|++.+|.++|.++|+|++++
T Consensus 73 aDi~~~~~~~~~~~~-----~~~-~~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 73 ADAYLFVVLRWAPGV-----GLD-LSDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred HHHHHHHHHHHHhhc-----CCC-hhhChHHHHHHHHHHhCHHhHhhC
Confidence 588888887665431 222 246799999999999999999863
No 14
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=96.80 E-value=0.00075 Score=44.48 Aligned_cols=43 Identities=23% Similarity=0.413 Sum_probs=33.3
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcC
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTK 48 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~ 48 (108)
+|++++|++.+..... .+..+.+|++.+|.++|.++|+++++.
T Consensus 70 aDi~l~~~~~~~~~~~-----~~~~~~~p~l~~w~~~~~~~p~~~~~~ 112 (113)
T cd03178 70 ADIAIFPWVRRLEWIG-----IDDLDDFPNVKRWLDRIAARPAVQRGL 112 (113)
T ss_pred eeeeHHHHHHHHHhcc-----ccchhhchHHHHHHHHHhhCHHHHHhc
Confidence 5999988887765432 222356799999999999999999864
No 15
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=96.79 E-value=0.00048 Score=46.94 Aligned_cols=45 Identities=22% Similarity=0.406 Sum_probs=32.5
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcC
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTK 48 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~ 48 (108)
+|++++|++.++.... ..++. .+++|+|.+|.++|.++|++++++
T Consensus 71 ADi~l~~~l~~~~~~~--~~~~~-~~~~P~L~~w~~r~~~rpa~~~~~ 115 (115)
T cd03196 71 ADWAIFPFVRQFAHVD--PKWFD-QSPYPRLRRWLNGFLASPLFSKIM 115 (115)
T ss_pred HHHHHHHHHHHHHHhh--hcccC-cccCHHHHHHHHHHHcChHHHhhC
Confidence 4888888877665432 11221 256899999999999999999863
No 16
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=96.76 E-value=0.00038 Score=45.98 Aligned_cols=44 Identities=20% Similarity=0.434 Sum_probs=32.5
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcC
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTK 48 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~ 48 (108)
+|++++|++.++.... . +. ..+++|+|.+|.++|.++|++++++
T Consensus 75 aDi~l~~~~~~~~~~~--~-~~-~~~~~p~l~~~~~~~~~~p~~~~~~ 118 (118)
T cd03187 75 ADLSHLPYLQYLMATP--F-AK-LFDSRPHVKAWWEDISARPAWKKVL 118 (118)
T ss_pred HHHHHHHHHHHHHHcc--c-hh-hhhcCchHHHHHHHHHhCHHHHhhC
Confidence 4888888887775421 1 11 1346899999999999999998753
No 17
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=96.75 E-value=0.00038 Score=44.55 Aligned_cols=37 Identities=27% Similarity=0.458 Sum_probs=29.7
Q ss_pred CcEEeehhHHHHHHHhhhcccccc-CCCCccHHHHHHHHcCCc
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDI-TAGRPKLAAWIEELNKLD 42 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l-~ee~PkL~aW~eaM~e~P 42 (108)
+|+++.|++.++..+.. .. .+++|+|.+|.++|.++|
T Consensus 58 ADi~~~~~~~~~~~~~~-----~~~~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 58 ADIALFPMLDWLERLGP-----DFLFEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHTT-----TTTHTTSHHHHHHHHHHHTSH
T ss_pred hHHHHHHHHHHHHHhCC-----CcccccCHHHHHHHHHHHcCC
Confidence 58899999888877552 22 367899999999999987
No 18
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=96.71 E-value=0.00041 Score=47.10 Aligned_cols=46 Identities=20% Similarity=0.293 Sum_probs=34.7
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcCCCh
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADP 51 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~~~~ 51 (108)
+|+++++++.++.... ....+.+|+|.+|.++|.++|+|++++.+.
T Consensus 65 aDi~l~~~~~~~~~~~-----~~~~~~~P~l~~~~~rv~~~p~vk~~~~~~ 110 (121)
T cd03209 65 VDFLLYEALDQHRIFE-----PDCLDAFPNLKDFLERFEALPKISAYMKSD 110 (121)
T ss_pred HHHHHHHHHHHHHHhC-----ccccccChHHHHHHHHHHHCHHHHHHHhcc
Confidence 4788888877775532 112356899999999999999999987553
No 19
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=96.68 E-value=0.00069 Score=45.48 Aligned_cols=44 Identities=27% Similarity=0.401 Sum_probs=33.4
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcCCC
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKAD 50 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~~~ 50 (108)
+|++++|++.++... ++++ +.+|+|.+|.++|.++|+++++.+.
T Consensus 76 ADi~~~~~~~~~~~~-----~~~~-~~~p~l~~w~~~~~~~p~~~~~~~~ 119 (121)
T cd03191 76 ADICLVPQVYNARRF-----GVDL-SPYPTIARINEACLELPAFQAAHPD 119 (121)
T ss_pred HHHHHHHHHHHHHHh-----CCCc-ccCcHHHHHHHHHHhChhHHHhCcC
Confidence 588888887665432 3332 5679999999999999999998753
No 20
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=96.64 E-value=0.00046 Score=47.38 Aligned_cols=45 Identities=16% Similarity=0.214 Sum_probs=34.1
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcCCC
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKAD 50 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~~~ 50 (108)
+|+++++++.++.... + ...+.+|+|.+|.++|.++|+|++++..
T Consensus 68 ADi~l~~~~~~~~~~~----~-~~~~~~P~l~~~~~rv~~~p~v~~~~~~ 112 (126)
T cd03210 68 ADYNLFDLLDIHLVLA----P-GCLDAFPLLKAFVERLSARPKLKAYLES 112 (126)
T ss_pred HHHHHHHHHHHHHHhC----h-HhhhcChHHHHHHHHHHhCcHHHHHHhC
Confidence 5888888877765432 1 1235679999999999999999998754
No 21
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=96.56 E-value=0.00076 Score=45.29 Aligned_cols=43 Identities=26% Similarity=0.580 Sum_probs=33.3
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcC
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTK 48 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~ 48 (108)
+|++++|++.++.... +++ .+.+|+|.+|.++|.++|++++..
T Consensus 68 aDi~l~~~~~~~~~~~----~~~-~~~~p~l~~w~~~~~~~p~~~~~~ 110 (118)
T cd03177 68 ADLSLVATVSTLEALL----PLD-LSKYPNVRAWLERLKALPPYEEAN 110 (118)
T ss_pred HHHHHHHHHHHHHHhc----CCC-hhhCchHHHHHHHHHcccchHHHH
Confidence 5889999988875411 232 245799999999999999999855
No 22
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=96.32 E-value=0.0012 Score=48.11 Aligned_cols=44 Identities=23% Similarity=0.358 Sum_probs=33.9
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcCCC
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKAD 50 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~~~ 50 (108)
+|+++++++.++..+ +++ .+++|+|.+|.++|.++|++|++..+
T Consensus 161 ADi~~~~~l~~~~~~-----~~~-~~~~p~l~~~~~~~~~rp~~~~~~~~ 204 (210)
T TIGR01262 161 ADLCLVPQVYNAERF-----GVD-LTPYPTLRRIAAALAALPAFQRAHPE 204 (210)
T ss_pred HHHHHHHHHHHHHHc-----CCC-cccchHHHHHHHHHhcCHHHHHhCcc
Confidence 588888887665321 222 25689999999999999999999865
No 23
>PTZ00057 glutathione s-transferase; Provisional
Probab=96.31 E-value=0.00084 Score=49.54 Aligned_cols=45 Identities=18% Similarity=0.182 Sum_probs=34.3
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcCCC
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKAD 50 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~~~ 50 (108)
+|+++++++.++... . +.++ +.+|+|.+|.++|.++|+|++.+.+
T Consensus 155 AD~~l~~~~~~~~~~---~-~~~l-~~~P~l~~~~~r~~~~P~~k~y~~~ 199 (205)
T PTZ00057 155 ADLAVFNLYDDIETK---Y-PNSL-KNFPLLKAHNEFISNLPNIKNYISN 199 (205)
T ss_pred HHHHHHHHHHHHHHh---C-hhhh-ccChhHHHHHHHHHhChHHHHHHHh
Confidence 588888888876531 1 2222 5689999999999999999998643
No 24
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=96.28 E-value=0.0014 Score=42.79 Aligned_cols=42 Identities=19% Similarity=0.234 Sum_probs=31.5
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcCC
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKA 49 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~~ 49 (108)
+|+++++++.+.... +. .+++|+|.+|.++|.++|+++++..
T Consensus 60 aDi~~~~~~~~~~~~-----~~--~~~~p~l~~w~~~~~~~p~~~~~~~ 101 (103)
T cd03207 60 ADVLVGSPLGWGLQF-----GL--LPERPAFDAYIARITDRPAFQRAAA 101 (103)
T ss_pred HHHHHHHHHHHHHHc-----CC--CCCChHHHHHHHHHHcCHHHHHHhc
Confidence 477777777776431 21 3567999999999999999998753
No 25
>PRK10357 putative glutathione S-transferase; Provisional
Probab=96.27 E-value=0.0015 Score=47.48 Aligned_cols=48 Identities=19% Similarity=0.182 Sum_probs=34.9
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcCCCh
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADP 51 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~~~~ 51 (108)
+|+++++++.++.... . +....+++|++.+|.++|.++|+++.+.|+.
T Consensus 154 ADi~l~~~l~~~~~~~--~-~~~~~~~~p~l~~~~~~i~~rp~~~~~~~~~ 201 (202)
T PRK10357 154 ATIAIACAVGYLNFRR--V-APGWCVDRPHLVKLVENLFQRESFARTEPPK 201 (202)
T ss_pred HHHHHHHHHHHHHhcc--c-CcchhhcChHHHHHHHHHhcChhhhhcCCCC
Confidence 4888888877664421 1 1112246799999999999999999988764
No 26
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=96.20 E-value=0.0014 Score=44.19 Aligned_cols=43 Identities=26% Similarity=0.485 Sum_probs=31.6
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcC--CcchhhcC
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNK--LDAYKSTK 48 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e--~PaVKks~ 48 (108)
+|+++++.+.+.... +++..+.+|+|.+|.++|.+ +|++++..
T Consensus 76 ADi~l~~~~~~~~~~-----~~~~~~~~p~l~~w~~~~~~~~~p~~~~~~ 120 (126)
T cd03183 76 ADLSAVCEIMQPEAA-----GYDVFEGRPKLAAWRKRVKEAGNPLFDEAH 120 (126)
T ss_pred HHHHHHHHHHHHHhc-----CCcccccCchHHHHHHHHHHhcchhHHHHH
Confidence 478777776655432 33334668999999999999 89998854
No 27
>PLN02395 glutathione S-transferase
Probab=96.12 E-value=0.0015 Score=47.80 Aligned_cols=46 Identities=26% Similarity=0.366 Sum_probs=32.9
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcCC
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKA 49 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~~ 49 (108)
+|++++|++.++..- ..+....+++|+|.+|.++|.++|++++++.
T Consensus 164 ADi~l~~~~~~~~~~---~~~~~~~~~~p~L~~w~~~~~~rp~~k~~~~ 209 (215)
T PLN02395 164 ADLAHLPFTEYLVGP---IGKAYLIKDRKHVSAWWDDISSRPAWKEVLA 209 (215)
T ss_pred HHHHHHHHHHHHhcc---cchhhhhccCchHHHHHHHHHcChHHHHHHH
Confidence 588889987776321 1111113457999999999999999998763
No 28
>PRK10542 glutathionine S-transferase; Provisional
Probab=96.10 E-value=0.0013 Score=47.60 Aligned_cols=44 Identities=14% Similarity=0.210 Sum_probs=33.3
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcCCC
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKAD 50 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~~~ 50 (108)
+|++++|++.+...+ ++++ +.+|+|.+|.++|.++|++|+++..
T Consensus 154 ADi~l~~~~~~~~~~-----~~~~-~~~p~l~~w~~~~~~~p~~k~~~~~ 197 (201)
T PRK10542 154 ADAYLFTVLRWAYAV-----KLNL-EGLEHIAAYMQRVAERPAVAAALKA 197 (201)
T ss_pred HhHHHHHHHHHhhcc-----CCCc-ccchHHHHHHHHHHcCHHHHHHHHH
Confidence 588888887766432 2222 4579999999999999999997643
No 29
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=96.05 E-value=0.0013 Score=43.97 Aligned_cols=48 Identities=13% Similarity=0.153 Sum_probs=33.9
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcCCCh
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADP 51 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~~~~ 51 (108)
+|+++++.+.++.... . +....+.+|++.+|.++|.++|+++++..+.
T Consensus 70 aDi~l~~~~~~~~~~~--~-~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~ 117 (123)
T cd03181 70 ADIFVAGALLLGFTYV--F-DKEWRAKYPNVTRWFNTVVNQPIFKAVFGEV 117 (123)
T ss_pred HHHHHHHHHHHHHHHH--c-CHHHHHhChHHHHHHHHHHcCHHHHHHcCCC
Confidence 4777777777753321 1 1111245799999999999999999988664
No 30
>PLN02473 glutathione S-transferase
Probab=96.02 E-value=0.0015 Score=47.93 Aligned_cols=46 Identities=17% Similarity=0.255 Sum_probs=33.1
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcCC
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKA 49 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~~ 49 (108)
+|++++|++.++.... .. ..+.+++|+|.+|.++|.++|+++++..
T Consensus 165 ADi~~~~~~~~~~~~~-~~--~~~~~~~P~l~~w~~~~~~~p~~~~~~~ 210 (214)
T PLN02473 165 ADLTHMPGMRYIMNET-SL--SGLVTSRENLNRWWNEISARPAWKKLME 210 (214)
T ss_pred HHHHHHHHHHHHHhcc-cc--HHHHhcCHHHHHHHHHHhcChhhHHHHH
Confidence 4888888877654321 11 1223568999999999999999998763
No 31
>PRK11752 putative S-transferase; Provisional
Probab=95.83 E-value=0.0023 Score=49.61 Aligned_cols=50 Identities=16% Similarity=0.176 Sum_probs=34.8
Q ss_pred CcEEeehhHHHHHHHhhh-ccccccCCCCccHHHHHHHHcCCcchhhcCCC
Q 045074 1 VDIAYIPFVERFQIFLSE-EFKYDITAGRPKLAAWIEELNKLDAYKSTKAD 50 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~-~~g~~l~ee~PkL~aW~eaM~e~PaVKks~~~ 50 (108)
+|++++|++.++...... ..++.-.+++|+|.+|.++|.++|+++++...
T Consensus 208 ADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~rPs~k~~~~~ 258 (264)
T PRK11752 208 ADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAERPAVKRGRIV 258 (264)
T ss_pred HHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHhCHHHHHHHhc
Confidence 588999988777542100 10111135679999999999999999997754
No 32
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=95.82 E-value=0.0026 Score=42.13 Aligned_cols=39 Identities=15% Similarity=0.251 Sum_probs=28.2
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcch
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAY 44 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaV 44 (108)
+|+++++++.++.. .+.++.+++|+|.+|.++|.++|+|
T Consensus 79 aDi~l~~~~~~~~~-----~~~~~~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 79 ADITAFVGLDFAKV-----VKLRVPEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred HHHHHHHHhHHHHh-----cCCCCccccHHHHHHHHHHHhccCC
Confidence 47777777665433 1334445679999999999999986
No 33
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=95.79 E-value=0.0015 Score=48.18 Aligned_cols=44 Identities=25% Similarity=0.389 Sum_probs=31.7
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcCCC
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKAD 50 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~~~ 50 (108)
+|++++|++.+... . +++ .+++|+|.+|.++|.++|++|+++..
T Consensus 162 ADi~l~~~~~~~~~----~-~~~-~~~~P~l~~w~~r~~~rp~~~~~~~~ 205 (215)
T PRK13972 162 ADIACWPWVNAWTR----Q-RID-LAMYPAVKNWHERIRSRPATGQALLK 205 (215)
T ss_pred HHHHHHHHHHHHhh----c-CCc-chhCHHHHHHHHHHHhCHHHHHHHHH
Confidence 47877777654321 1 222 25689999999999999999987644
No 34
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=95.79 E-value=0.0027 Score=43.04 Aligned_cols=40 Identities=8% Similarity=0.072 Sum_probs=31.4
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcC
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTK 48 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~ 48 (108)
+|+++++.+.|+... |++++ |++.+|.++|.++|+|++.+
T Consensus 72 AD~~l~~~~~~~~~~-----g~~l~---p~l~ay~~r~~~rPa~~~~~ 111 (114)
T cd03195 72 ADTDLALMLNRLVLN-----GDPVP---ERLRDYARRQWQRPSVQAWL 111 (114)
T ss_pred HHHHHHHHHHHHHHc-----CCCCC---HHHHHHHHHHHCCHHHHHHH
Confidence 477888887777553 34442 99999999999999999865
No 35
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=95.64 E-value=0.0043 Score=43.17 Aligned_cols=39 Identities=21% Similarity=0.377 Sum_probs=29.4
Q ss_pred CcEEeehhHHHHHHHhhhcccccc----CCCCccHHHHHHHHcCCcch
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDI----TAGRPKLAAWIEELNKLDAY 44 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l----~ee~PkL~aW~eaM~e~PaV 44 (108)
+|+++++++.|+..+. ++. .+++|+|.+|.++|.++|++
T Consensus 69 ADi~l~~~l~~~~~~~-----~~~~~~~~~~~P~l~~w~~rv~aRpsf 111 (111)
T cd03204 69 ADISLGVTLHRLKFLG-----LSRRYWGNGKRPNLEAYFERVLQRESF 111 (111)
T ss_pred HHHHHHHHHHHHHHcC-----ccccccccccChHHHHHHHHHHcCCCC
Confidence 4888888888876432 222 24679999999999999985
No 36
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=95.52 E-value=0.0035 Score=42.69 Aligned_cols=40 Identities=23% Similarity=0.417 Sum_probs=30.5
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcC
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTK 48 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~ 48 (108)
+|++++|++.++... +.+. .|+|.+|.++|.++|+|++.+
T Consensus 73 ADi~l~~~~~~~~~~-----~~~~---~P~l~~~~~rv~~rPsv~~~~ 112 (114)
T cd03194 73 ADAFFAPVVTRFRTY-----GLPL---SPAAQAYVDALLAHPAMQEWI 112 (114)
T ss_pred HHHHHHHHHHHHHHc-----CCCC---CHHHHHHHHHHHCCHHHHHHH
Confidence 488888887777432 2222 299999999999999999864
No 37
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=95.46 E-value=0.004 Score=43.84 Aligned_cols=45 Identities=16% Similarity=0.149 Sum_probs=32.7
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcCCC
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKAD 50 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~~~ 50 (108)
+|+++++++.++.... ....+.+|+|.+|.++|.++|+|++.+..
T Consensus 71 ADi~l~~~l~~~~~~~-----~~~l~~~P~l~~~~~rv~~~P~vk~~~~~ 115 (137)
T cd03208 71 ADIHLLEAILMVEELD-----PSLLSDFPLLQAFKTRISNLPTIKKFLQP 115 (137)
T ss_pred HHHHHHHHHHHHHHhc-----hhhhccChHHHHHHHHHHcCHHHHHHHhc
Confidence 4677777766654322 11235679999999999999999998864
No 38
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=95.00 E-value=0.0046 Score=37.74 Aligned_cols=34 Identities=35% Similarity=0.686 Sum_probs=26.3
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHH
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEE 37 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~ea 37 (108)
+|++++|++.++..... +.++.+++|+|.+|.++
T Consensus 36 aD~~l~~~l~~~~~~~~---~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 36 ADIALAPFLWRLRFVGP---DFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHCTH---TCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCc---CcCccccCHHHHHHHhC
Confidence 58999999999987642 23344678999999986
No 39
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=94.97 E-value=0.0085 Score=38.85 Aligned_cols=38 Identities=21% Similarity=0.247 Sum_probs=26.7
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcch
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAY 44 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaV 44 (108)
+|++++|++.+... . +.. .+++|+|.+|.++|.++|++
T Consensus 73 aDi~~~~~~~~~~~----~-~~~-~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 73 ADIPLGCSAYRWFE----L-PIE-RPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHHHHHHHHHHH----c-ccc-cccCchHHHHHHHHHhCCCC
Confidence 47777777654321 1 121 35679999999999999975
No 40
>PRK15113 glutathione S-transferase; Provisional
Probab=94.64 E-value=0.0071 Score=44.77 Aligned_cols=45 Identities=11% Similarity=0.084 Sum_probs=33.8
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcCCChHH
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKQ 53 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~~~~Ek 53 (108)
+|++++|++.++... +.++ .|+|.+|.++|.++|+|++...+.++
T Consensus 167 ADi~l~~~l~~~~~~-----~~~~---~p~l~~~~~r~~~rp~~~~~~~~~~~ 211 (214)
T PRK15113 167 ADTDLALMLNRLVLH-----GDEV---PERLADYATFQWQRASVQRWLALSAK 211 (214)
T ss_pred HHHHHHHHHHHHHHc-----CCCC---CHHHHHHHHHHhcCHHHHHHHHHhhh
Confidence 588888887766432 2222 29999999999999999998766554
No 41
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=94.32 E-value=0.021 Score=39.35 Aligned_cols=37 Identities=14% Similarity=0.175 Sum_probs=27.0
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCC
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKL 41 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~ 41 (108)
+|+++++++.+..... ++++.+++|++.+|.++|.+.
T Consensus 88 AD~~l~~~l~~~~~~~----~~~~~~~~p~l~~W~~r~~~~ 124 (124)
T cd03202 88 ADYIVFGGFQWARIVS----PFPLLEEDDPVYDWFERCLDL 124 (124)
T ss_pred hHHHHHHHHHHHHHcC----cccccccCChHHHHHHHHhcC
Confidence 5888888877765421 344456789999999999863
No 42
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=93.82 E-value=0.021 Score=37.20 Aligned_cols=38 Identities=21% Similarity=0.439 Sum_probs=26.1
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcch
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAY 44 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaV 44 (108)
+|++++++..+... .++. .+++|+|.+|.++|.++|++
T Consensus 63 aDi~~~~~~~~~~~-----~~~~-~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 63 ADVAVYPYVALAPE-----GGVD-LEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred HHHHHHHHHHHHhc-----cCCC-hhhCcHHHHHHHHHHhCcCC
Confidence 47777777654221 1222 25679999999999999975
No 43
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=93.49 E-value=0.021 Score=35.74 Aligned_cols=35 Identities=31% Similarity=0.571 Sum_probs=25.8
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHH
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEEL 38 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM 38 (108)
+|++++|++.++....... + +.+++|+|.+|.++|
T Consensus 66 aDi~~~~~l~~~~~~~~~~-~--~~~~~p~l~~~~~~~ 100 (100)
T cd00299 66 ADIALAPVLARLDLLGPLL-G--LLDEYPRLAAWYDRL 100 (100)
T ss_pred HHHHHHHHHHHHHHhhhhh-h--hhccCccHHHHHHhC
Confidence 5899999999987754211 1 346689999999875
No 44
>PRK10387 glutaredoxin 2; Provisional
Probab=90.58 E-value=0.035 Score=40.30 Aligned_cols=38 Identities=16% Similarity=0.337 Sum_probs=27.0
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchh
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYK 45 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVK 45 (108)
+|++++|++.++.... +.+ ..|+|.+|.++|.++|+|.
T Consensus 171 ADi~l~~~l~~~~~~~----~~~---~~p~l~~w~~r~~~r~~~~ 208 (210)
T PRK10387 171 DDIHLFPILRNLTLVK----GIE---WPPRVADYRDNMSKKTQVP 208 (210)
T ss_pred HHHHHHHHHhcceeec----CCC---CCHHHHHHHHHHHHHhCCC
Confidence 4777777766664421 221 2499999999999999874
No 45
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=89.64 E-value=0.14 Score=33.76 Aligned_cols=36 Identities=19% Similarity=0.160 Sum_probs=24.6
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCc
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLD 42 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~P 42 (108)
+|+++.+.+.++... +. ..+.+|+|.+|.++|.++|
T Consensus 84 ADi~l~~~~~~~~~~-----~~-~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 84 ADIMMSFPLEAALAR-----GP-LLEKYPNIAAYLERIEARP 119 (119)
T ss_pred HHHHHHHHHHHHHHc-----Cc-ccccCchHHHHHHHHhcCC
Confidence 467766666555331 22 2356799999999999886
No 46
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=89.44 E-value=0.12 Score=37.83 Aligned_cols=39 Identities=31% Similarity=0.550 Sum_probs=27.8
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchh
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYK 45 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVK 45 (108)
+|+++++++.++.... .++ +++|++.+|.++|.++|+.+
T Consensus 161 AD~~~~~~~~~~~~~~-----~~~-~~~p~l~~w~~r~~~rp~~~ 199 (211)
T COG0625 161 ADIALAPLLWRLALLG-----EEL-ADYPALKAWYERVLARPAFR 199 (211)
T ss_pred HHHHHHHHHHHhhhcC-----ccc-ccChHHHHHHHHHHcCCchh
Confidence 4677777776644422 222 56799999999999999954
No 47
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=88.05 E-value=0.19 Score=37.09 Aligned_cols=35 Identities=17% Similarity=0.419 Sum_probs=24.9
Q ss_pred CcEEeehhHHHHHHHhhhcccc-ccCCCCccHHHHHHHHcC
Q 045074 1 VDIAYIPFVERFQIFLSEEFKY-DITAGRPKLAAWIEELNK 40 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~-~l~ee~PkL~aW~eaM~e 40 (108)
+|+++++++..+..+. ++ ++ .++|++.+|.++|.+
T Consensus 110 ADisvyg~l~s~e~~~----~~~Dl-~~~p~I~~W~eRm~~ 145 (149)
T cd03197 110 ADLAVYGVLRSVEGHP----AFKDM-VEETKIGEWYERMDA 145 (149)
T ss_pred HHHHHHHHHHHHHHhc----cccch-hhCcCHHHHHHHHHH
Confidence 5788888865554432 34 43 367999999999986
No 48
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=87.77 E-value=0.12 Score=33.64 Aligned_cols=17 Identities=24% Similarity=0.653 Sum_probs=13.9
Q ss_pred cCCCCccHHHHHHHHcC
Q 045074 24 ITAGRPKLAAWIEELNK 40 (108)
Q Consensus 24 l~ee~PkL~aW~eaM~e 40 (108)
+++++|+|.+|.++|.+
T Consensus 83 ~~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 83 FPKDYPNLVRWYERIEE 99 (99)
T ss_dssp HTTTCHHHHHHHHHHHT
T ss_pred cccccHHHHHHHHhhcC
Confidence 34678999999999974
No 49
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=86.14 E-value=0.18 Score=32.73 Aligned_cols=35 Identities=29% Similarity=0.382 Sum_probs=22.5
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHH
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEEL 38 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM 38 (108)
+|+++++.+.+..... . +.+..+++|+|.+|.++|
T Consensus 64 ADi~l~~~l~~~~~~~--~-~~~~~~~~p~l~~w~~rm 98 (98)
T cd03205 64 ADIAVACALGYLDFRH--P-DLDWRAAHPALAAWYARF 98 (98)
T ss_pred HHHHHHHHHHHHHhHc--c-CcchhhhChHHHHHHHhC
Confidence 4777777776664322 1 222235679999999986
No 50
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=83.96 E-value=0.15 Score=32.35 Aligned_cols=39 Identities=13% Similarity=0.160 Sum_probs=23.7
Q ss_pred CcEEeehhHHHHHHHhhhccccc-cCCCCccHHHHHHHHc
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYD-ITAGRPKLAAWIEELN 39 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~-l~ee~PkL~aW~eaM~ 39 (108)
+|++++|++.++........... ..+++|+|.+|.++|.
T Consensus 49 aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 49 LDATVFGHLASILYAPLPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHHhC
Confidence 48888888877654211000010 1245799999999874
No 51
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=83.73 E-value=0.67 Score=37.85 Aligned_cols=59 Identities=19% Similarity=0.327 Sum_probs=45.0
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcCCChHHHHHHHHH
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYRS 60 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~~~~Ekl~ef~k~ 60 (108)
+|+++++...|+..+..+- .+.-..+.|+|.++.++++.+++-++..++.-...-|...
T Consensus 239 ADVsLg~~LhRL~~Lg~e~-~yw~~gsrpnle~Yf~rvrrR~sf~kvlg~~fnilr~~~~ 297 (325)
T KOG4420|consen 239 ADVSLGATLHRLKFLGLEK-KYWEDGSRPNLESYFERVRRRFSFRKVLGDIFNILRFRLV 297 (325)
T ss_pred HHHHHHHHHHHHHHcccHH-HhcccCCCccHHHHHHHHHhhhHHHHhhhhHHHHHHHHHH
Confidence 5899999999998876221 2322345699999999999999999999886665555444
No 52
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=80.17 E-value=2.2 Score=33.51 Aligned_cols=60 Identities=12% Similarity=0.259 Sum_probs=50.0
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcCCChHHHHHHHHH
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYRS 60 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~~~~Ekl~ef~k~ 60 (108)
+|-.+.|=.+-+.+...++.+++++++++.+.++++++.++++-..+.+..+.....+..
T Consensus 156 aDcsLlPKL~~i~va~k~yk~~~IP~~lt~V~rYl~~~ya~d~F~~tcp~d~ei~~~y~~ 215 (221)
T KOG1422|consen 156 ADCSLLPKLHHIKVAAKHYKNFEIPASLTGVWRYLKNAYARDEFTNTCPADQEIILAYAP 215 (221)
T ss_pred ehhhhchhHHHHHHHHHHhcCCCCchhhhHHHHHHHHHHhHHHhhcCCchHHHHHHhhhh
Confidence 466777777777776567889999999999999999999999999999998777666554
No 53
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=79.31 E-value=0.59 Score=30.89 Aligned_cols=16 Identities=19% Similarity=0.557 Sum_probs=13.3
Q ss_pred CCCccHHHHHHHHcCC
Q 045074 26 AGRPKLAAWIEELNKL 41 (108)
Q Consensus 26 ee~PkL~aW~eaM~e~ 41 (108)
+.+|+|.+|.++|.+.
T Consensus 81 ~~~p~l~~w~~r~~~~ 96 (96)
T cd03200 81 AAPANVQRWLKSCENL 96 (96)
T ss_pred ccChHHHHHHHHHHhC
Confidence 4579999999999763
No 54
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=76.66 E-value=0.31 Score=36.11 Aligned_cols=37 Identities=16% Similarity=0.408 Sum_probs=23.7
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCc-cHHHHHHHHcCCcchh
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRP-KLAAWIEELNKLDAYK 45 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~P-kL~aW~eaM~e~PaVK 45 (108)
+|+++++++.++.... +. ..| +|.+|.++|.+++.|.
T Consensus 170 ADi~l~~~l~~~~~~~----~~----~~p~~l~~w~~Ri~ar~~~~ 207 (209)
T TIGR02182 170 DDILVFPLLRNLTLVA----GI----NWPSRVADYLDNMSKKSKVP 207 (209)
T ss_pred HHHHHHHHhcCeeeec----CC----CCChHHHHHHHHHHHHhCCC
Confidence 4666666655443211 11 245 9999999999998773
No 55
>PLN02907 glutamate-tRNA ligase
Probab=73.35 E-value=1.3 Score=39.87 Aligned_cols=40 Identities=13% Similarity=0.025 Sum_probs=26.5
Q ss_pred CcEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcc
Q 045074 1 VDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDA 43 (108)
Q Consensus 1 vDiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~Pa 43 (108)
+|+++|+++...... ..+....+.+|+|.+|.++|.++|+
T Consensus 120 ADIaL~~~L~~~~~~---~~~~~~~~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 120 ADIAIWSGLAGSGQR---WESLRKSKKYQNLVRWFNSISAEYS 159 (722)
T ss_pred HHHHHHHHHHhhhhh---hhcccccccCHHHHHHHHHHHhCCC
Confidence 478888776443110 1011123567999999999999999
No 56
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=64.76 E-value=2.6 Score=31.98 Aligned_cols=24 Identities=33% Similarity=0.606 Sum_probs=19.8
Q ss_pred CCCCccHHHHHHHHcCCcchhhcC
Q 045074 25 TAGRPKLAAWIEELNKLDAYKSTK 48 (108)
Q Consensus 25 ~ee~PkL~aW~eaM~e~PaVKks~ 48 (108)
.+++|++.+|.+++.+.|+-++..
T Consensus 184 ~~~~p~v~~W~~~~~~~P~~~e~~ 207 (226)
T KOG0867|consen 184 FEKYPKVARWYERIQKRPAYEEAN 207 (226)
T ss_pred hhhChHHHHHHHHHHhCccHHHHH
Confidence 356799999999999998866644
No 57
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=47.08 E-value=40 Score=25.67 Aligned_cols=60 Identities=22% Similarity=0.349 Sum_probs=46.8
Q ss_pred CCCccHHHHHHHHcCCcchhhcC-CChHHHHHHHHHhhhhhccCCCChhHHHHHHHHHHHH
Q 045074 26 AGRPKLAAWIEELNKLDAYKSTK-ADPKQLVEFYRSRFVVQFVEPSSEPAISRLRSALNQL 85 (108)
Q Consensus 26 ee~PkL~aW~eaM~e~PaVKks~-~~~Ekl~ef~k~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (108)
+..|.+.+|.+.|++-..---.+ ...+.-.+++...+...+.-+.-.|--+.+|.|+.++
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~fi~~A~KP~~~~fr~Al~~m 106 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPFIYRAKKPFGRAFRRALKEM 106 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCceeecccCccHHHHHHHHHHc
Confidence 34599999999999874332222 3367778888888889999999999999999999764
No 58
>PF02899 Phage_int_SAM_1: Phage integrase, N-terminal SAM-like domain; InterPro: IPR004107 Proteins containing this domain cleave DNA substrates by a series of staggered cuts, during which the protein becomes covalently linked to the DNA through a catalytic tyrosine residue at the carboxy end of the alignment [, ]. The phage integrase N-terminal SAM-like domain is almost always found with the signature that defines the phage integrase family (see IPR002104 from INTERPRO).; GO: 0003677 DNA binding, 0015074 DNA integration; PDB: 1Z1G_B 1Z19_A 1Z1B_A 2OXO_A 1P7D_B 3NRW_A 1A0P_A.
Probab=42.98 E-value=75 Score=19.20 Aligned_cols=59 Identities=17% Similarity=0.168 Sum_probs=34.0
Q ss_pred ccHHHHHHHHcCCcchhhcCCChHHHHHHHHHhhhhhccCCCChhHHHHHHHHHHHHHHHHHH
Q 045074 29 PKLAAWIEELNKLDAYKSTKADPKQLVEFYRSRFVVQFVEPSSEPAISRLRSALNQLVAWFVK 91 (108)
Q Consensus 29 PkL~aW~eaM~e~PaVKks~~~~Ekl~ef~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (108)
-.|..|.+-+.+.....-.-.+.+.+.+|+....... -|...+.+-.++|..+..|..+
T Consensus 24 ~~l~~f~~~~~~~~~~~~~~i~~~~v~~f~~~~~~~~----~s~~T~~~~~~alr~f~~~l~~ 82 (84)
T PF02899_consen 24 RDLRRFIRWLEEHGIIDWEDITEEDVRDFLEYLAKEG----LSPSTINRRLSALRAFFRFLYR 82 (84)
T ss_dssp HHHHHHHHHHHHTTS-CGGG--HHHHHHHHHHHHCTT------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHccC----CCHHHHHHHHHHHHHHHHHHHH
Confidence 3455555444442222223335666666666654433 7888899999999999999765
No 59
>KOG3802 consensus Transcription factor OCT-1, contains POU and HOX domains [Transcription]
Probab=34.32 E-value=52 Score=28.04 Aligned_cols=59 Identities=17% Similarity=0.222 Sum_probs=35.8
Q ss_pred HHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhcCCChHHHHHHHHHhhhhhccCCC
Q 045074 9 VERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYRSRFVVQFVEPS 70 (108)
Q Consensus 9 feRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks~~~~Ekl~ef~k~~~~~~~~~~~ 70 (108)
++||+++..-+.+. =+=.|.|.+|.+.-...++ -......|++..=-++++++.++|.+
T Consensus 246 IcRFEALqLSFKNM--CKLKPLL~KWLeEAes~~~-~~~~~~~e~i~a~~RkRKKRTSie~~ 304 (398)
T KOG3802|consen 246 ICRFEALQLSFKNM--CKLKPLLEKWLEEAESRES-TGSPNSIEKIGAQSRKRKKRTSIEVN 304 (398)
T ss_pred hhHhHhhccCHHHH--hhhHHHHHHHHHHHhcccc-cCCCCCHHHhhccccccccccceeHH
Confidence 45676655211111 1223999999998666422 22234467776666888888899864
No 60
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=33.72 E-value=24 Score=27.12 Aligned_cols=25 Identities=24% Similarity=0.283 Sum_probs=21.6
Q ss_pred CCCccHHHHHHHHcCCcchhhcCCC
Q 045074 26 AGRPKLAAWIEELNKLDAYKSTKAD 50 (108)
Q Consensus 26 ee~PkL~aW~eaM~e~PaVKks~~~ 50 (108)
+.+|+|.++.+++.++|.+|+.+.+
T Consensus 176 ~~~P~L~a~~~kv~~~p~ik~~i~~ 200 (206)
T KOG1695|consen 176 DHFPKLKAFKERVSSIPNIKKYLES 200 (206)
T ss_pred ccChHHHHHHHHHhcCchHHHHHhc
Confidence 4569999999999999999987644
No 61
>PF10414 CysG_dimeriser: Sirohaem synthase dimerisation region; InterPro: IPR019478 Bacterial sulphur metabolism depends on the iron-containing porphinoid sirohaem. CysG is a multi-functional enzyme with S-adenosyl-L-methionine (SAM)-dependent bismethyltransferase, dehydrogenase and ferrochelatase activities. CysG synthesizes sirohaem from uroporphyrinogen III via reactions which encompass two branchpoint intermediates in tetrapyrrole biosynthesis, diverting flux first from protoporphyrin IX biosynthesis and then from cobalamin (vitamin B12) biosynthesis. CysG is a dimer. Its dimerisation region is 74 residues long, and acts to hold the two structurally similar protomers held together asymmetrically through a number of salt-bridges across complementary residues within the dimerisation region []. CysG dimerisation produces a series of active sites, accounting for CysG's multi-functionality, catalysing four diverse reactions: Two SAM-dependent methylations NAD+-dependent tetrapyrrole dehydrogenation Metal chelation ; GO: 0006779 porphyrin-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1PJT_A 1PJS_A 1PJQ_A.
Probab=33.38 E-value=26 Score=21.18 Aligned_cols=38 Identities=21% Similarity=0.152 Sum_probs=24.9
Q ss_pred HHHHHHHHc-CCcchhhcCCChHHHHHHHHHhhhhhccC
Q 045074 31 LAAWIEELN-KLDAYKSTKADPKQLVEFYRSRFVVQFVE 68 (108)
Q Consensus 31 L~aW~eaM~-e~PaVKks~~~~Ekl~ef~k~~~~~~~~~ 68 (108)
+..|-+-+. -++.||..+++.+.=..|...+..+...+
T Consensus 3 ~g~lA~l~~~~R~~Vk~~l~~~~~RR~FWe~~~~g~~~~ 41 (60)
T PF10414_consen 3 LGRLAELAGRFRERVKQRLPDFAERRRFWERFFDGPFAE 41 (60)
T ss_dssp HHHHHHHHHHHHHHHHHH-SSHHHHHHHHHHHT-HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHcCHHHH
Confidence 344444432 35779999999888899999988666443
No 62
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=33.27 E-value=7 Score=26.97 Aligned_cols=13 Identities=15% Similarity=0.238 Sum_probs=10.5
Q ss_pred CCCccHHHHHHHH
Q 045074 26 AGRPKLAAWIEEL 38 (108)
Q Consensus 26 ee~PkL~aW~eaM 38 (108)
+++|+|.+|.++|
T Consensus 113 ~~~pnL~~y~~Ri 125 (126)
T cd03211 113 KKYSNLLAFCRRI 125 (126)
T ss_pred HhCcHHHHHHHhc
Confidence 4568999999887
No 63
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=30.61 E-value=8.4 Score=27.12 Aligned_cols=15 Identities=13% Similarity=0.317 Sum_probs=11.8
Q ss_pred CCCccHHHHHHHHcC
Q 045074 26 AGRPKLAAWIEELNK 40 (108)
Q Consensus 26 ee~PkL~aW~eaM~e 40 (108)
+++|+|.+|+++|.+
T Consensus 120 ~~~pnL~~~~~ri~~ 134 (137)
T cd03212 120 KQCPNLCRFCDRILS 134 (137)
T ss_pred HHCcHHHHHHHHHHH
Confidence 456999999998864
No 64
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=29.69 E-value=14 Score=26.48 Aligned_cols=38 Identities=13% Similarity=0.177 Sum_probs=23.9
Q ss_pred cEEeehhHHHHHHHhhhccccccCCCCccHHHHHHHHcCCcchhhc
Q 045074 2 DIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKST 47 (108)
Q Consensus 2 DiaiwPwfeRl~vl~~~~~g~~l~ee~PkL~aW~eaM~e~PaVKks 47 (108)
|..++|++.|+..- |.+++ +++..+.+.-.++|+|++-
T Consensus 74 D~dlA~ml~Rl~~~-----gd~vP---~~l~~Ya~~qwqrpsVQ~W 111 (117)
T PF14834_consen 74 DADLALMLNRLVTY-----GDPVP---ERLADYAERQWQRPSVQRW 111 (117)
T ss_dssp HHHHHHHHHHHHTT-----T-------HHHHHHHHHHHT-HHHHHH
T ss_pred HHHHHHHHHHHHHc-----CCCCC---HHHHHHHHHHHCCHHHHHH
Confidence 56667777776541 21221 6788899999999998863
No 65
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=25.48 E-value=40 Score=21.11 Aligned_cols=14 Identities=29% Similarity=0.800 Sum_probs=11.4
Q ss_pred CCCccHHHHHHHHc
Q 045074 26 AGRPKLAAWIEELN 39 (108)
Q Consensus 26 ee~PkL~aW~eaM~ 39 (108)
+++|+|.+|.+++.
T Consensus 92 ~~~p~l~~~~~~~~ 105 (105)
T cd03179 92 ADYPAIRAWLARIE 105 (105)
T ss_pred HhCccHHHHHHhhC
Confidence 45799999999874
No 66
>TIGR03044 PS_II_psb27 photosystem II protein Psb27. Members of this family are the Psb27 protein of the cyanobacterial photosynthetic supracomplex, photosystem II. Although most protein components of both cyanobacterial and chloroplast versions of photosystem II are closely related and described together by single model families, this family is strictly bacterial. Some uncharacterized proteins with highly divergent sequences, from Arabidopsis, score between trusted and noise cutoffs for this model but are not at this time assigned as functionally equivalent photosystem II proteins.
Probab=25.05 E-value=1.1e+02 Score=22.46 Aligned_cols=38 Identities=13% Similarity=0.204 Sum_probs=26.9
Q ss_pred hHHHHHHHHHhhhhhccCCCChhHHHHHHHHHHHHHHHHH
Q 045074 51 PKQLVEFYRSRFVVQFVEPSSEPAISRLRSALNQLVAWFV 90 (108)
Q Consensus 51 ~Ekl~ef~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (108)
.+..-+|+.+|+....+- ..+..+-+++|||.|-..+.
T Consensus 69 r~~indyvsrYRr~~~v~--g~~SFttm~TALNsLAGHY~ 106 (135)
T TIGR03044 69 RQLINDYISRYRRRPRVN--GLSSFTTMQTALNSLAGHYK 106 (135)
T ss_pred HHHHHHHHHHhcCCCCcC--CcccHHHHHHHHHHHHHHhc
Confidence 466777777777665543 35667888999998877664
No 67
>PTZ00151 translationally controlled tumor-like protein; Provisional
Probab=24.83 E-value=2.1e+02 Score=21.58 Aligned_cols=45 Identities=9% Similarity=0.246 Sum_probs=35.6
Q ss_pred cCCChHHHHHHHHHhhhhh--ccCCCChhHHHHHHHHHHHHHHHHHH
Q 045074 47 TKADPKQLVEFYRSRFVVQ--FVEPSSEPAISRLRSALNQLVAWFVK 91 (108)
Q Consensus 47 s~~~~Ekl~ef~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (108)
+..+...|..|++.|++.. ..|..++..+.-.....+..|.|.+.
T Consensus 81 t~f~Kk~Y~~yiK~YmK~vk~~L~e~~pe~v~~Fk~~a~~~vK~il~ 127 (172)
T PTZ00151 81 TPFTKKEYSTYIKKYMQRIKAYLEEKNPDRVEKFKTNAQPFVKHILE 127 (172)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHH
Confidence 3447888999999988877 67777788888888888888877553
No 68
>PF13326 PSII_Pbs27: Photosystem II Pbs27; PDB: 2KND_A 2KMF_A 2Y6X_A.
Probab=23.03 E-value=53 Score=23.93 Aligned_cols=39 Identities=15% Similarity=0.215 Sum_probs=28.9
Q ss_pred hHHHHHHHHHhhhhhccCCCChhHHHHHHHHHHHHHHHHHH
Q 045074 51 PKQLVEFYRSRFVVQFVEPSSEPAISRLRSALNQLVAWFVK 91 (108)
Q Consensus 51 ~Ekl~ef~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (108)
.+...+|+.+|+.+..+. .++....+.+|||+|...|-+
T Consensus 81 r~~in~~vs~YRr~~~v~--g~~Sf~~m~tAln~LaghY~s 119 (145)
T PF13326_consen 81 RELINDYVSRYRRGPSVS--GLPSFTTMYTALNALAGHYSS 119 (145)
T ss_dssp HHHHHHHHCCCCCCHHCC--TSHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHhCCCCCcC--CcchHHHHHHHHHHHHHHHHh
Confidence 466777777777766653 457888999999999887654
No 69
>PF13543 KSR1-SAM: SAM like domain present in kinase suppressor RAS 1
Probab=22.57 E-value=2.1e+02 Score=20.57 Aligned_cols=52 Identities=21% Similarity=0.273 Sum_probs=34.9
Q ss_pred CCccHHHHHHHHcCCcchhhcCCC------------hHHHHHHHHHhhhhhccCCCChhHHHHHHHHHHHH
Q 045074 27 GRPKLAAWIEELNKLDAYKSTKAD------------PKQLVEFYRSRFVVQFVEPSSEPAISRLRSALNQL 85 (108)
Q Consensus 27 e~PkL~aW~eaM~e~PaVKks~~~------------~Ekl~ef~k~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (108)
.+|+|..|..-+.=.|.+-+.+.+ ++++.+.+.. . ..++.-.+||.+|+..|
T Consensus 65 ~yP~l~~WL~vVgl~~~~i~~i~~~~~tLe~Llemsd~el~~~l~~----~---g~~~EE~rRL~~Al~~L 128 (129)
T PF13543_consen 65 SYPSLRQWLRVVGLRPESIQAILSKVLTLEALLEMSDEELKEILNR----C---GAREEECRRLCRALSNL 128 (129)
T ss_pred cCCcHHHHhhhcCCCHHHHHHHHHhhcCHHHHHhCCHHHHHHHHHH----h---CCCHHHHHHHHHHHHhc
Confidence 569999999998888877766622 3334443333 1 22356688999998765
No 70
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=21.86 E-value=60 Score=26.52 Aligned_cols=21 Identities=19% Similarity=0.586 Sum_probs=18.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHh
Q 045074 72 EPAISRLRSALNQLVAWFVKS 92 (108)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~ 92 (108)
.|.++-|+.|++|-++||++.
T Consensus 289 d~~ft~l~~ai~~t~~Wy~~N 309 (315)
T KOG1431|consen 289 DFKFTPLEQAISETVQWYLDN 309 (315)
T ss_pred CcccChHHHHHHHHHHHHHHh
Confidence 467788999999999999875
No 71
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=21.70 E-value=40 Score=21.30 Aligned_cols=13 Identities=38% Similarity=0.416 Sum_probs=10.6
Q ss_pred CCCccHHHHHHHH
Q 045074 26 AGRPKLAAWIEEL 38 (108)
Q Consensus 26 ee~PkL~aW~eaM 38 (108)
+.+|+|.+|.++|
T Consensus 92 ~~~p~l~~~~~~~ 104 (104)
T cd03192 92 KKYPKLKALRERV 104 (104)
T ss_pred HhChhHHHHHHhC
Confidence 4579999999875
No 72
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=20.47 E-value=30 Score=24.82 Aligned_cols=16 Identities=31% Similarity=0.652 Sum_probs=12.7
Q ss_pred ccHHHHHHHHcCCcch
Q 045074 29 PKLAAWIEELNKLDAY 44 (108)
Q Consensus 29 PkL~aW~eaM~e~PaV 44 (108)
|++.+|+++|.+.--|
T Consensus 110 ~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 110 PKVKAYLERMSALTKV 125 (128)
T ss_pred HHHHHHHHHHHHHhCC
Confidence 8899999999875443
No 73
>PLN00064 photosystem II protein Psb27; Provisional
Probab=20.35 E-value=1.4e+02 Score=22.59 Aligned_cols=48 Identities=13% Similarity=0.128 Sum_probs=29.3
Q ss_pred CcchhhcCCC-hHHHHHHHHHhhhhhccCCCChhHHHHHHHHHHHHHHHHH
Q 045074 41 LDAYKSTKAD-PKQLVEFYRSRFVVQFVEPSSEPAISRLRSALNQLVAWFV 90 (108)
Q Consensus 41 ~PaVKks~~~-~Ekl~ef~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (108)
+|...+...+ .+..-+|+.+|+....+ +..+..+-+++|||+|-..|.
T Consensus 87 dp~~a~a~aeaR~~iNdyvSrYRr~~~v--~Gl~SFttMyTALNaLAGHY~ 135 (166)
T PLN00064 87 DPNVADAVAELRETSNSWVAKYRREKAL--LGRPSFRDMYSALNAVSGHYI 135 (166)
T ss_pred CccHHHHHHHHHHHHHHHHHHhcCCCcc--cCcccHHHHHHHHHHHHHHhh
Confidence 3444443333 45666677776665444 234567788899999887763
Done!