BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045076
(145 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9MAH3|DJ1B_ARATH Protein DJ-1 homolog B OS=Arabidopsis thaliana GN=DJ1B PE=2 SV=1
Length = 438
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 95/145 (65%), Positives = 114/145 (78%), Gaps = 1/145 (0%)
Query: 1 KQLRVDACHGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGR 60
Q+ VDACHG+K+VAD L+SD D+VFDLI LP +P LK K LE +VKKQ ++GR
Sbjct: 89 NQVGVDACHGIKMVADTLLSDITDSVFDLIMLPGGLPGGETLKNCKPLEKMVKKQDTDGR 148
Query: 61 LYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGT 120
L AA+C +PA+A G+WGLL+G KATCYP FME+LA ACA VESRV+ DGK+VT+RGPGT
Sbjct: 149 LNAAICCAPALAFGTWGLLEGKKATCYPVFMEKLA-ACATAVESRVEIDGKIVTSRGPGT 207
Query: 121 TMEFAVALVEQLYRKGKADEVSGPL 145
TMEF+V LVEQL K KA EVSGPL
Sbjct: 208 TMEFSVTLVEQLLGKEKAVEVSGPL 232
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 86/142 (60%), Gaps = 2/142 (1%)
Query: 1 KQLRVDACHGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGR 60
L V A VK+VAD L+ + +DLI LP + A S+ L ++KKQA + +
Sbjct: 294 NSLEVVASRKVKLVADVLLDEAEKNSYDLIVLPGGLGGAEAFASSEKLVNMLKKQAESNK 353
Query: 61 LYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGT 120
Y A+CASPA+ GLLKG KAT +P+ +L + +E RV DG ++T+RGPGT
Sbjct: 354 PYGAICASPALVFEPHGLLKGKKATAFPAMCSKLTD--QSHIEHRVLVDGNLITSRGPGT 411
Query: 121 TMEFAVALVEQLYRKGKADEVS 142
++EFA+A+VE+ Y + K ++S
Sbjct: 412 SLEFALAIVEKFYGREKGLQLS 433
>sp|Q9FPF0|DJ1A_ARATH Protein DJ-1 homolog A OS=Arabidopsis thaliana GN=DJ1A PE=1 SV=1
Length = 392
Score = 191 bits (486), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 91/144 (63%), Positives = 113/144 (78%)
Query: 2 QLRVDACHGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRL 61
Q+ VDACHG+K+VAD L+SD D+VFDLI LP +P LK K LE +VKKQ S+GRL
Sbjct: 43 QVGVDACHGIKMVADTLLSDITDSVFDLIVLPGGLPGGETLKNCKSLENMVKKQDSDGRL 102
Query: 62 YAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTT 121
AA+C +PA+ALG+WGLL+G KAT YP FME+LA CA VESRVQ DG++VT+RGPGTT
Sbjct: 103 NAAICCAPALALGTWGLLEGKKATGYPVFMEKLAATCATAVESRVQIDGRIVTSRGPGTT 162
Query: 122 MEFAVALVEQLYRKGKADEVSGPL 145
+EF++ L+EQL+ K KADEVS L
Sbjct: 163 IEFSITLIEQLFGKEKADEVSSIL 186
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 79/138 (57%), Gaps = 2/138 (1%)
Query: 1 KQLRVDACHGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGR 60
L V+ K+VA+ L+ + + FDLI LP + A + L +++KQA +
Sbjct: 248 NSLEVEGSRKAKLVAEVLLDEVAEKSFDLIVLPGGLNGAQRFASCEKLVNMLRKQAEANK 307
Query: 61 LYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGT 120
Y +CASPA GLLKG KAT +P ++L+ + +E RV DG V+T+R PGT
Sbjct: 308 PYGGICASPAYVFEPNGLLKGKKATTHPVVSDKLSD--KSHIEHRVVVDGNVITSRAPGT 365
Query: 121 TMEFAVALVEQLYRKGKA 138
MEF++A+VE+ Y + KA
Sbjct: 366 AMEFSLAIVEKFYGREKA 383
>sp|Q8VY09|DJ1C_ARATH Protein DJ-1 homolog C OS=Arabidopsis thaliana GN=DJ1C PE=2 SV=1
Length = 472
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 93/141 (65%), Gaps = 2/141 (1%)
Query: 1 KQLRVDACHGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGR 60
++L V+ G +++AD L+S C D V+DL+ALP MP A L++ ++LE I+K+QA + R
Sbjct: 120 QKLEVEGSSGTRLLADVLISKCADQVYDLVALPGGMPGAVRLRDCEILEKIMKRQAEDKR 179
Query: 61 LYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGT 120
LY A+ +PA+ L WGLL + T +P+F +L A V++ +Q G++ T+RGPGT
Sbjct: 180 LYGAISMAPAITLLPWGLLTRKRTTGHPAFFGKLPTFWA--VKTNIQISGELTTSRGPGT 237
Query: 121 TMEFAVALVEQLYRKGKADEV 141
+ +FA++L EQL+ + A +
Sbjct: 238 SFQFALSLAEQLFGETTAKSI 258
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 82/143 (57%), Gaps = 4/143 (2%)
Query: 1 KQLRVDACHGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGR 60
+ LR+ A G KI+ D L+ + ++ +DLI LP + L++SK+L+ ++++Q +GR
Sbjct: 323 RSLRITAFQGTKIITDKLIGEAAESSYDLIILPGGHTGSERLQKSKILKKLLREQHESGR 382
Query: 61 LYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVE-SRVQQDGKVVTTRGPG 119
+Y A +S V L GLLK + T YPS E P +E + V DG V+T+ G
Sbjct: 383 IYGATNSSSTV-LHKHGLLKEKRTTVYPS--ESDEPMNQQMIEGAEVVIDGNVITSLGLA 439
Query: 120 TTMEFAVALVEQLYRKGKADEVS 142
T +F++A+V +L+ +A VS
Sbjct: 440 TVTKFSLAIVSKLFGHARARSVS 462
>sp|Q7TQ35|PARK7_MESAU Protein DJ-1 OS=Mesocricetus auratus GN=PARK7 PE=1 SV=1
Length = 189
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 80/137 (58%), Gaps = 3/137 (2%)
Query: 11 VKIVADALVSDCR-DAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASP 69
V I D + D + +D++ LP A NL ES V++ I+K+Q S L AA+CA P
Sbjct: 50 VMICPDTSLEDAKKQGPYDVVVLPGGNLGAQNLSESPVVKEILKEQESRKGLIAAICAGP 109
Query: 70 AVALGSWGLLKGLKATCYPSFMEQLAPACAATV-ESRVQQDGKVVTTRGPGTTMEFAVAL 128
AL + + G K T +P +++ + ESRV++DG ++T+RGPGT+ EFA+A+
Sbjct: 110 -TALLAHEIGFGSKVTTHPGAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAI 168
Query: 129 VEQLYRKGKADEVSGPL 145
VE L K AD+V PL
Sbjct: 169 VEALSGKEAADQVKAPL 185
>sp|Q8UW59|PARK7_CHICK Protein DJ-1 OS=Gallus gallus GN=PARK7 PE=2 SV=1
Length = 189
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 81/139 (58%), Gaps = 7/139 (5%)
Query: 11 VKIVADALVSDCR-DAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASP 69
V I DA + D R + +D+I LP A NL ES ++ I+K Q S L AA+CA P
Sbjct: 50 VLICPDASLEDARKEGPYDVIVLPGGNLGAQNLSESAAVKDILKDQESRKGLIAAICAGP 109
Query: 70 AVALGSWGLLKGLKATCYPSFMEQL---APACAATVESRVQQDGKVVTTRGPGTTMEFAV 126
AL + G+ G K +P +++ A C + ESRV++DG ++T+RGPGT+ EF +
Sbjct: 110 -TALLAHGIGFGSKVITHPLAKDKMMNGAHYCYS--ESRVEKDGNILTSRGPGTSFEFGL 166
Query: 127 ALVEQLYRKGKADEVSGPL 145
A+VE L K A++V PL
Sbjct: 167 AIVEALMGKEVAEQVKAPL 185
>sp|Q99LX0|PARK7_MOUSE Protein DJ-1 OS=Mus musculus GN=Park7 PE=1 SV=1
Length = 189
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 80/137 (58%), Gaps = 3/137 (2%)
Query: 11 VKIVADALVSDCR-DAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASP 69
V I D + D + +D++ LP A NL ES +++ I+K+Q S L AA+CA P
Sbjct: 50 VMICPDTSLEDAKTQGPYDVVVLPGGNLGAQNLSESPMVKEILKEQESRKGLIAAICAGP 109
Query: 70 AVALGSWGLLKGLKATCYPSFMEQLAPACAATV-ESRVQQDGKVVTTRGPGTTMEFAVAL 128
AL + + G K T +P +++ + ESRV++DG ++T+RGPGT+ EFA+A+
Sbjct: 110 -TALLAHEVGFGCKVTTHPLAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAI 168
Query: 129 VEQLYRKGKADEVSGPL 145
VE L K A++V PL
Sbjct: 169 VEALVGKDMANQVKAPL 185
>sp|O88767|PARK7_RAT Protein DJ-1 OS=Rattus norvegicus GN=Park7 PE=1 SV=1
Length = 189
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Query: 27 FDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSWGLLKGLKATC 86
+D++ LP A NL ES +++ I+K+Q + L AA+CA P AL + + G K T
Sbjct: 67 YDVVVLPGGNLGAQNLSESALVKEILKEQENRKGLIAAICAGP-TALLAHEVGFGCKVTS 125
Query: 87 YPSFMEQLAPACAATV-ESRVQQDGKVVTTRGPGTTMEFAVALVEQLYRKGKADEVSGPL 145
+P +++ + ESRV++DG ++T+RGPGT+ EFA+A+VE L K A++V PL
Sbjct: 126 HPLAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIVEALSGKDMANQVKAPL 185
>sp|Q5XJ36|PARK7_DANRE Protein DJ-1 OS=Danio rerio GN=park7 PE=2 SV=1
Length = 189
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 77/137 (56%), Gaps = 3/137 (2%)
Query: 11 VKIVADALVSDC-RDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASP 69
V I D+ + D + +D++ LP + A NL ES ++ ++K Q L AA+CA P
Sbjct: 50 VMICPDSSLEDAHKQGPYDVVLLPGGLLGAQNLSESPAVKEVLKDQEGRKGLIAAICAGP 109
Query: 70 AVALGSWGLLKGLKATCYPSFMEQL-APACAATVESRVQQDGKVVTTRGPGTTMEFAVAL 128
AL + G+ G T +P +++ A E+RVQ+DG V+T+RGPGT+ EFA+ +
Sbjct: 110 -TALLAHGIAYGSTVTTHPGAKDKMMAGDHYKYSEARVQKDGNVITSRGPGTSFEFALTI 168
Query: 129 VEQLYRKGKADEVSGPL 145
VE+L A +V PL
Sbjct: 169 VEELMGAEVAAQVKAPL 185
>sp|Q95LI9|PARK7_CHLAE Protein DJ-1 OS=Chlorocebus aethiops GN=PARK7 PE=2 SV=1
Length = 189
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 80/137 (58%), Gaps = 3/137 (2%)
Query: 11 VKIVADALVSDCR-DAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASP 69
V I DA + D + + +D++ LP A NL ES ++ I+K+Q + L AA+CA P
Sbjct: 50 VVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGP 109
Query: 70 AVALGSWGLLKGLKATCYPSFMEQLAPACAATV-ESRVQQDGKVVTTRGPGTTMEFAVAL 128
AL + + G K T +P +++ T E+RV++DG ++T+RGPGT+ EFA+A+
Sbjct: 110 -TALLAHEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGTSFEFALAI 168
Query: 129 VEQLYRKGKADEVSGPL 145
VE L K A +V PL
Sbjct: 169 VEALNGKEVAAQVKAPL 185
>sp|Q99497|PARK7_HUMAN Protein DJ-1 OS=Homo sapiens GN=PARK7 PE=1 SV=2
Length = 189
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 80/137 (58%), Gaps = 3/137 (2%)
Query: 11 VKIVADALVSDCR-DAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASP 69
V I DA + D + + +D++ LP A NL ES ++ I+K+Q + L AA+CA P
Sbjct: 50 VVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGP 109
Query: 70 AVALGSWGLLKGLKATCYPSFMEQLAPACAATV-ESRVQQDGKVVTTRGPGTTMEFAVAL 128
AL + + G K T +P +++ T E+RV++DG ++T+RGPGT+ EFA+A+
Sbjct: 110 -TALLAHEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGTSFEFALAI 168
Query: 129 VEQLYRKGKADEVSGPL 145
VE L K A +V PL
Sbjct: 169 VEALNGKEVAAQVKAPL 185
>sp|Q5E946|PARK7_BOVIN Protein DJ-1 OS=Bos taurus GN=PARK7 PE=2 SV=1
Length = 189
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 79/137 (57%), Gaps = 3/137 (2%)
Query: 11 VKIVADALVSDCR-DAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASP 69
V I DA + D + + +D++ LP A NL ES ++ I+K+Q L AA+CA P
Sbjct: 50 VVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQEKRKGLIAAICAGP 109
Query: 70 AVALGSWGLLKGLKATCYPSFMEQLAPACAATV-ESRVQQDGKVVTTRGPGTTMEFAVAL 128
AL + + G K T +P +++ + E+RV++DG ++T+RGPGT+ EFA+ +
Sbjct: 110 -TALLAHEIGFGSKVTTHPLAKDKMMNGSHYSYSENRVEKDGLILTSRGPGTSFEFALKI 168
Query: 129 VEQLYRKGKADEVSGPL 145
VE L K AD+V PL
Sbjct: 169 VEVLVGKEVADQVKAPL 185
>sp|Q46948|YAJL_ECOLI Chaperone protein YajL OS=Escherichia coli (strain K12) GN=yajL
PE=1 SV=2
Length = 196
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 82/146 (56%), Gaps = 4/146 (2%)
Query: 2 QLRVDACHGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRL 61
L + GVK++ADA + + D +D+I LP + A ++S +L VK+ +GR+
Sbjct: 42 NLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRI 101
Query: 62 YAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKV--VTTRGPG 119
AA+CA+PA L + T +P+ +++ PA ++ RV D +V +T++GPG
Sbjct: 102 VAAICAAPATVLVPHDIFPIGNMTGFPTLKDKI-PA-EQWLDKRVVWDARVKLLTSQGPG 159
Query: 120 TTMEFAVALVEQLYRKGKADEVSGPL 145
T ++F + +++ L + KA EV+ L
Sbjct: 160 TAIDFGLKIIDLLVGREKAHEVASQL 185
>sp|P55880|YAJL_SALTY Chaperone protein YajL OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=yajL PE=3 SV=2
Length = 196
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 81/146 (55%), Gaps = 4/146 (2%)
Query: 2 QLRVDACHGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRL 61
L + GVK++ADA + + D +D+I LP + A ++S +L VK+ +GR+
Sbjct: 42 NLTIVCSRGVKLLADAPLVEVADGDYDIIVLPGGIKGAECFRDSPLLVETVKQFHRSGRI 101
Query: 62 YAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKV--VTTRGPG 119
AA+CA+ A L + T +P+ +++ PA ++ RV D +V +T++GPG
Sbjct: 102 VAAICAAAATVLVPHDIFPIGNMTGFPALKDKI-PA-EQWLDKRVVWDARVKLLTSQGPG 159
Query: 120 TTMEFAVALVEQLYRKGKADEVSGPL 145
T ++F + +++ L + KA EV+ L
Sbjct: 160 TAIDFGLKIIDLLAGREKAHEVASQL 185
>sp|Q9V1F8|PFPI_PYRAB Intracellular protease 1 OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=pfpI PE=3 SV=1
Length = 166
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
Query: 9 HGVKIVADALVSDCRDAVFDLIALPVCM-PDATNLKESKVLETIVKKQASNGRLYAAVCA 67
HG + D + FD + LP P+ L E V I KK S G+ A++C
Sbjct: 44 HGYTVNVDLAFEEVNPDEFDALVLPGGRAPERVRLNEKAV--EIAKKMFSEGKPVASICH 101
Query: 68 SPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVA 127
P + + + G+L+G + T YP + + A V++ V DG V++R PG +
Sbjct: 102 GPQILISA-GVLRGRRGTSYPGIKDDMINAGVDWVDAEVVVDGNWVSSRVPGDLYAWMRE 160
Query: 128 LVEQL 132
V+ L
Sbjct: 161 FVKLL 165
>sp|O59413|PFPI_PYRHO Intracellular protease 1 OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=pfpI PE=1 SV=1
Length = 166
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 4/125 (3%)
Query: 9 HGVKIVADALVSDCRDAVFDLIALPVCM-PDATNLKESKVLETIVKKQASNGRLYAAVCA 67
HG + D FD + LP P+ L E V +I +K S G+ A++C
Sbjct: 44 HGYSVKVDLTFDKVNPEEFDALVLPGGRAPERVRLNEKAV--SIARKMFSEGKPVASICH 101
Query: 68 SPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVA 127
P + + + G+L+G K T YP + + A V++ V DG V++R P +
Sbjct: 102 GPQILISA-GVLRGRKGTSYPGIKDDMINAGVEWVDAEVVVDGNWVSSRVPADLYAWMRE 160
Query: 128 LVEQL 132
V+ L
Sbjct: 161 FVKLL 165
>sp|Q51732|PFPI_PYRFU Intracellular protease 1 OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=pfpI PE=1 SV=1
Length = 166
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 4/125 (3%)
Query: 9 HGVKIVADALVSDCRDAVFDLIALPVCM-PDATNLKESKVLETIVKKQASNGRLYAAVCA 67
HG + D + FD + LP P+ L E V I +K + G+ A +C
Sbjct: 44 HGYSVKVDLTFDEVNPDEFDALVLPGGRAPERVRLNEKAV--EIARKMFTEGKPVATICH 101
Query: 68 SPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVA 127
P + + + G+LKG K T Y + + A ++ V DG V++R PG +
Sbjct: 102 GPQILISA-GVLKGRKGTSYIGIRDDMINAGVEWIDREVVVDGNWVSSRHPGDLYAWMRE 160
Query: 128 LVEQL 132
V+ L
Sbjct: 161 FVKLL 165
>sp|Q5JGM7|PFPI_PYRKO Intracellular protease 1 OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=pfpI PE=3 SV=1
Length = 166
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 4/130 (3%)
Query: 4 RVDACHGVKIVADALVSDCRDAVFDLIALPVCM-PDATNLKESKVLETIVKKQASNGRLY 62
++ HG + D + FD + LP P+ L E V I KK +G+
Sbjct: 39 KITGKHGYTVNVDLAFDEVDPDEFDALVLPGGRAPEIVRLNEKAV--AITKKMFEDGKPV 96
Query: 63 AAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTM 122
A++C P + + + G+LKG K T + + + A A +++ V DG V++R PG
Sbjct: 97 ASICHGPQILISA-GVLKGRKGTSTVTIRDDVKNAGAEWIDAEVVVDGNWVSSRHPGDLY 155
Query: 123 EFAVALVEQL 132
+ V+ L
Sbjct: 156 AWMREFVKLL 165
>sp|Q8G9F9|INHA_PSEPU Isonitrile hydratase OS=Pseudomonas putida GN=inhA PE=1 SV=1
Length = 228
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 5 VDACHGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAA 64
V + G+++ DC V D+I +P +++ + L+ ++ QA+ R +
Sbjct: 43 VTSSTGLQLKPTTTFEDC--PVLDVICVPGGAGVGPLMEDEQTLD-FIRSQAAQARYVTS 99
Query: 65 VCASPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEF 124
VC ++ LG+ GLL+G +AT + ++ + L A V+ RV +DG + T G ++F
Sbjct: 100 VCTG-SLVLGAAGLLQGKRATTHWAYHDLLPTLGAIPVKDRVVRDGNLFTGGGITAGIDF 158
Query: 125 AVALVEQL 132
A+ L ++L
Sbjct: 159 ALTLAQEL 166
>sp|Q54MG7|PARK7_DICDI Protein DJ-1 OS=Dictyostelium discoideum GN=DDB_G0285969 PE=3 SV=1
Length = 205
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 13/149 (8%)
Query: 5 VDACHGVKIVADALVSDCRDAV--FDLIALPVCMPDATNLKE--SKVLETIVKKQASNGR 60
V + GVK+ D L+ + ++ FD +A+P + + +E S+ + +++ S G+
Sbjct: 52 VTSTFGVKVQVDVLLGEVVKSLDEFDALAIPGGFENYSFYEEAYSEDVSQLIRDFDSKGK 111
Query: 61 LYAAVCASPAVALGSWGLLKGLKATCYPSFM-------EQLAPACAATV-ESRVQQDGKV 112
A+VC + A+ALG G+LKG AT Y + + +QL A + + + D V
Sbjct: 112 HIASVCVA-ALALGKSGILKGRNATTYRNSLREHSVRQQQLRDFGANVIADQSIVIDKNV 170
Query: 113 VTTRGPGTTMEFAVALVEQLYRKGKADEV 141
+T+ P T A L+ +L + KA +V
Sbjct: 171 ITSYNPQTAPYVAFELLSRLSDENKAKKV 199
>sp|Q58377|Y967_METJA Uncharacterized protein MJ0967 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0967 PE=3 SV=1
Length = 205
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 45 SKVLETIVKKQASNGRLYAAVCASPAVALGSWGLLKGLKATCYPS--FMEQLAPACAATV 102
+K++E +VK+ + ++ +A+C SP V L G+LKG KAT YP+ +E+L A A
Sbjct: 113 TKLIE-LVKEFYNKNKVVSAICLSPVV-LARAGILKGKKATVYPAPEAIEELKKAGAIYE 170
Query: 103 ESRVQQDGKVVTTRGPGTTMEFAVALVEQLYRKGK 137
+ V DG V+T + P F + +++ + + +
Sbjct: 171 DRGVVVDGNVITAKSPDYARLFGLEVLKAIEKNNE 205
>sp|Q8CRV8|Y1560_STAES Uncharacterized protein SE_1560 OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=SE_1560 PE=3 SV=1
Length = 172
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Query: 9 HGVKIVADALVSDCRDAVFDLIALPVCM-PDATNLKESKVLETIVKKQASNGRLYAAVCA 67
HG K+ D ++D + +D + +P PD E T K N A+C
Sbjct: 47 HGEKVTVDVSIADAKPENYDALLIPGGFSPDHLRGDEEGRYGTFAKYFTKNDVPTFAICH 106
Query: 68 SPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVA 127
P V + + L KG T + + L+ A A V+ V D +VT+R P +F
Sbjct: 107 GPLVLVDTDDL-KGRTITGVINVRKDLSNAGANVVDESVVVDNNIVTSRVPDDLDDFNRE 165
Query: 128 LVEQL 132
+V++L
Sbjct: 166 IVKKL 170
>sp|Q5HN59|Y1413_STAEQ Uncharacterized protein SERP1413 OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=SERP1413 PE=3 SV=1
Length = 172
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Query: 9 HGVKIVADALVSDCRDAVFDLIALPVCM-PDATNLKESKVLETIVKKQASNGRLYAAVCA 67
HG K+ D ++D + +D + +P PD E T K N A+C
Sbjct: 47 HGEKVTVDVSIADAKPENYDALLIPGGFSPDHLRGDEEGRYGTFAKYFTKNDVPTFAICH 106
Query: 68 SPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVA 127
P V + + L KG T + + L+ A A V+ V D +VT+R P +F
Sbjct: 107 GPLVLVDTDDL-KGRTITGVINVRKDLSNAGANVVDESVVVDNNIVTSRVPDDLDDFNRE 165
Query: 128 LVEQL 132
+V++L
Sbjct: 166 IVKKL 170
>sp|Q49WT1|Y1625_STAS1 Uncharacterized protein SSP1625 OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=SSP1625 PE=3 SV=1
Length = 172
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Query: 9 HGVKIVADALVSDCRDAVFDLIALPVCM-PDATNLKESKVLETIVKKQASNGRLYAAVCA 67
HG K+ D ++D + +D + +P PD E T K N A+C
Sbjct: 47 HGEKVTVDVSIADAKPENYDALLIPGGFSPDHLRGDEEGRYGTFTKYFTQNDVPTFAICH 106
Query: 68 SPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVA 127
P + + + L KG T + + L+ A A V+ V D +VT+R P +F
Sbjct: 107 GPLLLVDTDDL-KGRTITGVINVRKDLSNAGAHVVDESVVIDNNIVTSRVPDDLDDFNRE 165
Query: 128 LVEQL 132
++++L
Sbjct: 166 IIKKL 170
>sp|Q4L7I2|Y1084_STAHJ Uncharacterized protein SH1084 OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=SH1084 PE=3 SV=1
Length = 172
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 2/125 (1%)
Query: 9 HGVKIVADALVSDCRDAVFDLIALPVCM-PDATNLKESKVLETIVKKQASNGRLYAAVCA 67
HG K++ D ++D + +D + +P PD T K N A+C
Sbjct: 47 HGEKVIVDVSIADAKPEDYDGLLIPGGFSPDHLRGDAEGRYGTFAKYFTKNDVPAFAICH 106
Query: 68 SPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVA 127
P + + + L G T + + L+ A A V+ V D +VT+R P +F
Sbjct: 107 GPQILIDTDD-LNGRTLTAVLNVRKDLSNAGANVVDESVVVDKNIVTSRTPDDLDDFNRE 165
Query: 128 LVEQL 132
+V+QL
Sbjct: 166 IVKQL 170
>sp|P0A0K3|Y2013_STAA8 Uncharacterized protein SAOUHSC_02013 OS=Staphylococcus aureus
(strain NCTC 8325) GN=SAOUHSC_02013 PE=3 SV=1
Length = 171
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 2/125 (1%)
Query: 9 HGVKIVADALVSDCRDAVFDLIALPVCM-PDATNLKESKVLETIVKKQASNGRLYAAVCA 67
HG K+ D +++ + +D + +P PD T K N A+C
Sbjct: 47 HGEKVTVDVGIAEAKPEDYDALLIPGGFSPDHLRGDTEGRYGTFAKYFTKNDVPTFAICH 106
Query: 68 SPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVA 127
P + + + L KG T + + L+ A A V+ V D +VT+R P +F
Sbjct: 107 GPQILIDTDDL-KGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDDLDDFNRE 165
Query: 128 LVEQL 132
+V+QL
Sbjct: 166 IVKQL 170
>sp|Q5HEP9|Y1933_STAAC Uncharacterized protein SACOL1933 OS=Staphylococcus aureus (strain
COL) GN=SACOL1933 PE=3 SV=1
Length = 171
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 2/125 (1%)
Query: 9 HGVKIVADALVSDCRDAVFDLIALPVCM-PDATNLKESKVLETIVKKQASNGRLYAAVCA 67
HG K+ D +++ + +D + +P PD T K N A+C
Sbjct: 47 HGEKVTVDVGIAEAKPEDYDALLIPGGFSPDHLRGDTEGRYGTFAKYFTKNDVPTFAICH 106
Query: 68 SPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVA 127
P + + + L KG T + + L+ A A V+ V D +VT+R P +F
Sbjct: 107 GPQILIDTDDL-KGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDDLDDFNRE 165
Query: 128 LVEQL 132
+V+QL
Sbjct: 166 IVKQL 170
>sp|P0A0K0|Y1875_STAAM Uncharacterized protein SAV1875 OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=SAV1875 PE=3 SV=1
Length = 171
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 2/125 (1%)
Query: 9 HGVKIVADALVSDCRDAVFDLIALPVCM-PDATNLKESKVLETIVKKQASNGRLYAAVCA 67
HG K+ D +++ + +D + +P PD T K N A+C
Sbjct: 47 HGEKVTVDVGIAEAKPEDYDALLIPGGFSPDHLRGDTEGRYGTFAKYFTKNDVPTFAICH 106
Query: 68 SPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVA 127
P + + + L KG T + + L+ A A V+ V D +VT+R P +F
Sbjct: 107 GPQILIDTDDL-KGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDDLDDFNRE 165
Query: 128 LVEQL 132
+V+QL
Sbjct: 166 IVKQL 170
>sp|P0A0K2|Y1815_STAAW Uncharacterized protein MW1815 OS=Staphylococcus aureus (strain
MW2) GN=MW1815 PE=3 SV=1
Length = 171
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 2/125 (1%)
Query: 9 HGVKIVADALVSDCRDAVFDLIALPVCM-PDATNLKESKVLETIVKKQASNGRLYAAVCA 67
HG K+ D +++ + +D + +P PD T K N A+C
Sbjct: 47 HGEKVTVDVGIAEAKPEDYDALLIPGGFSPDHLRGDTEGRYGTFAKYFTKNDVPTFAICH 106
Query: 68 SPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVA 127
P + + + L KG T + + L+ A A V+ V D +VT+R P +F
Sbjct: 107 GPQILIDTDDL-KGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDDLDDFNRE 165
Query: 128 LVEQL 132
+V+QL
Sbjct: 166 IVKQL 170
>sp|Q6G859|Y1797_STAAS Uncharacterized protein SAS1797 OS=Staphylococcus aureus (strain
MSSA476) GN=SAS1797 PE=3 SV=1
Length = 171
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 2/125 (1%)
Query: 9 HGVKIVADALVSDCRDAVFDLIALPVCM-PDATNLKESKVLETIVKKQASNGRLYAAVCA 67
HG K+ D +++ + +D + +P PD T K N A+C
Sbjct: 47 HGEKVTVDVGIAEAKPEDYDALLIPGGFSPDHLRGDTEGRYGTFAKYFTKNDVPTFAICH 106
Query: 68 SPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVA 127
P + + + L KG T + + L+ A A V+ V D +VT+R P +F
Sbjct: 107 GPQILIDTDDL-KGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDDLDDFNRE 165
Query: 128 LVEQL 132
+V+QL
Sbjct: 166 IVKQL 170
>sp|P0A0K1|Y1692_STAAN Uncharacterized protein SA1692 OS=Staphylococcus aureus (strain
N315) GN=SA1692 PE=3 SV=1
Length = 171
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 2/125 (1%)
Query: 9 HGVKIVADALVSDCRDAVFDLIALPVCM-PDATNLKESKVLETIVKKQASNGRLYAAVCA 67
HG K+ D +++ + +D + +P PD T K N A+C
Sbjct: 47 HGEKVTVDVGIAEAKPEDYDALLIPGGFSPDHLRGDTEGRYGTFAKYFTKNDVPTFAICH 106
Query: 68 SPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVA 127
P + + + L KG T + + L+ A A V+ V D +VT+R P +F
Sbjct: 107 GPQILIDTDDL-KGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDDLDDFNRE 165
Query: 128 LVEQL 132
+V+QL
Sbjct: 166 IVKQL 170
>sp|Q6GFI2|Y1965_STAAR Uncharacterized protein SAR1965 OS=Staphylococcus aureus (strain
MRSA252) GN=SAR1965 PE=3 SV=1
Length = 171
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 2/125 (1%)
Query: 9 HGVKIVADALVSDCRDAVFDLIALPVCM-PDATNLKESKVLETIVKKQASNGRLYAAVCA 67
HG K+ D +++ + +D + +P PD T K N A+C
Sbjct: 47 HGEKVTVDVGIAEAKPEDYDALLIPGGFSPDHLRGDTEGRYGTFAKYFTKNDVPTFAICH 106
Query: 68 SPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVA 127
P + + + L KG T + + L+ A A V+ V D +VT+R P +F
Sbjct: 107 GPQILIDTDDL-KGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDDLDDFNRE 165
Query: 128 LVEQL 132
+V+QL
Sbjct: 166 IVKQL 170
>sp|O06006|YRAA_BACSU Putative cysteine protease YraA OS=Bacillus subtilis (strain 168)
GN=yraA PE=2 SV=2
Length = 169
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 4/117 (3%)
Query: 9 HGVKIVADALVSDCRDAVFDLIALPVCM-PDATNLKESKVLETIVKKQASNGRLYAAVCA 67
HG K+ D +SD + FD + +P PD L+ K N + A+C
Sbjct: 47 HGEKVKIDKAISDVDASDFDALLIPGGFSPDL--LRADDRPGEFAKAFVENKKPVFAICH 104
Query: 68 SPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEF 124
P V + + LLKG T Y S + L A A ++ V +VT+R P F
Sbjct: 105 GPQVLIDT-DLLKGKDITGYRSIRKDLINAGANYKDAEVVVSHNIVTSRTPDDLEAF 160
>sp|Q10356|YDB3_SCHPO Uncharacterized protein C22E12.03c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC22E12.03c PE=1 SV=1
Length = 191
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
Query: 27 FDLIALPVCMPDATNLKESKVLETIVKK-QASNGRLYAAVCASPAVALGSWGLLKGLKAT 85
+D+ +P A L + ++ +VK+ + +CA A S L + T
Sbjct: 71 YDIAIIPGGGLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAGTLTAKTSG--LPNKQIT 128
Query: 86 CYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVALVEQLYRKGKADEV 141
+PS QL ++ V + ++T++GPGT M F + L+EQ+ K K + V
Sbjct: 129 GHPSVRGQLEEGGYKYLDQPVVLEENLITSQGPGTAMLFGLKLLEQVASKDKYNAV 184
>sp|O28987|Y1281_ARCFU Uncharacterized protein AF_1281 OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_1281 PE=3 SV=1
Length = 168
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 37 PDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAP 96
P+ + E V IVK G+ AA+C P + + + + KG + T + + L
Sbjct: 73 PERVRINERAV--EIVKDFLELGKPVAAICHGPQLLISAMAV-KGRRMTSWIGIRDDLIA 129
Query: 97 ACAATVESRVQQDGKVVTTRGPGTTMEFAVALVEQLYR 134
A A + V DG V+T+R P F L++ L R
Sbjct: 130 AGALYEDRPVVVDGNVITSRMPDDLPYFCGELIKILKR 167
>sp|C4L690|GATA_EXISA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Exiguobacterium
sp. (strain ATCC BAA-1283 / AT1b) GN=gatA PE=3 SV=1
Length = 480
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 80 KGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVA 127
KG++ TC +F+E PA ATV R+ G + T G EFA+
Sbjct: 82 KGMRTTCASTFLENFVPAHDATVVERLHDAGAL--TIGKLNMDEFAMG 127
>sp|B1YM01|GATA_EXIS2 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Exiguobacterium
sibiricum (strain DSM 17290 / JCM 13490 / 255-15)
GN=gatA PE=3 SV=1
Length = 480
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 80 KGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVA 127
KG+ TC F+E PA ATV R+ + G + T G EFA+
Sbjct: 82 KGMTTTCGSKFLENFVPAHDATVVERLHEAGAI--TIGKLNMDEFAMG 127
>sp|Q971U6|GATA_SULTO Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Sulfolobus
tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 /
7) GN=gatA PE=3 SV=2
Length = 472
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 80 KGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVA 127
KG++ TC +E P ATV +++Q+G V+ G EFA+
Sbjct: 75 KGIRTTCASRMLEDYVPPYDATVIEKLKQEGAVIL--GKTNMDEFAMG 120
>sp|Q3AKH0|GATA_SYNSC Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp.
(strain CC9605) GN=gatA PE=3 SV=1
Length = 491
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 80 KGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAV 126
KG++ TC +EQ P +TV R+ Q G V+ G EFA+
Sbjct: 85 KGVRTTCSSRMLEQFVPPYESTVTERLWQAGGVLV--GKTNLDEFAM 129
>sp|Q8HWS3|RFX6_HUMAN DNA-binding protein RFX6 OS=Homo sapiens GN=RFX6 PE=1 SV=2
Length = 928
Score = 30.8 bits (68), Expect = 3.2, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 92 EQLAPACAATVESRVQQDGKVVTTRGPGT 120
E+L PACAAT ++Q ++TTR GT
Sbjct: 156 EKLEPACAATFGKTIRQKFPLLTTRRLGT 184
>sp|A0RU64|GATA_CENSY Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cenarchaeum
symbiosum (strain A) GN=gatA PE=3 SV=1
Length = 479
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 42 LKESKVLETIVKKQASNGRLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACAAT 101
L E++ +++ +KK GR C +A+ ++G++ TC +E AT
Sbjct: 47 LDEARRIDSRIKKGEKVGR-----CLGAPIAVKDNICVRGMRTTCASKMLEGYESPYDAT 101
Query: 102 VESRVQQDGKVVTTRGPGTTM-EFAVALVEQL 132
V +R+ + ++T + T M EFA+ L +
Sbjct: 102 VVTRLLAEDAIITGK---TNMDEFAMGLTTEF 130
>sp|D2HNW6|RFX6_AILME DNA-binding protein RFX6 OS=Ailuropoda melanoleuca GN=RFX6 PE=3
SV=2
Length = 928
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 92 EQLAPACAATVESRVQQDGKVVTTRGPGT 120
E+L PACAAT ++Q ++TTR GT
Sbjct: 156 EKLEPACAATFGKTIRQKFPLLTTRRLGT 184
>sp|Q8C7R7|RFX6_MOUSE DNA-binding protein RFX6 OS=Mus musculus GN=Rfx6 PE=1 SV=2
Length = 927
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 92 EQLAPACAATVESRVQQDGKVVTTRGPGT 120
E+L PACAAT ++Q ++TTR GT
Sbjct: 155 EKLEPACAATFGKTIRQKFPLLTTRRLGT 183
>sp|B2V855|GATA_SULSY Glutamyl-tRNA(Gln) amidotransferase subunit A
OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=gatA
PE=3 SV=1
Length = 485
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 80 KGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVA 127
K +K TC +E P ATV R++ G V+T G EFA+
Sbjct: 85 KDIKTTCSSKMLENFVPVYDATVIERLKSQGYVIT--GKTNLDEFAMG 130
>sp|Q5RJA1|RFX6_DANRE DNA-binding protein RFX6 OS=Danio rerio GN=rfx6 PE=2 SV=2
Length = 848
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 92 EQLAPACAATVESRVQQDGKVVTTRGPGT 120
E+L PACAAT ++Q ++TTR GT
Sbjct: 88 EKLDPACAATFGKTIRQKFPLLTTRRLGT 116
>sp|Q81CK1|KYNB_BACCR Kynurenine formamidase OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=kynB PE=1 SV=1
Length = 209
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 9 HGVKIVADALVSDCRDAVFDLIALPVCMPDA 39
HG+ I+ + ++ D ++LIALP+ + DA
Sbjct: 167 HGIHILENVVLDHVADGDYELIALPLALTDA 197
>sp|Q6HHX8|KYNB_BACHK Kynurenine formamidase OS=Bacillus thuringiensis subsp. konkukian
(strain 97-27) GN=kynB PE=3 SV=1
Length = 209
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 9 HGVKIVADALVSDCRDAVFDLIALPVCMPDA 39
HG+ I+ + ++ D ++LIALP+ + DA
Sbjct: 167 HGIHILENVVLDHVADGDYELIALPLALSDA 197
>sp|Q63AJ1|KYNB_BACCZ Kynurenine formamidase OS=Bacillus cereus (strain ZK / E33L)
GN=kynB PE=3 SV=1
Length = 209
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 9 HGVKIVADALVSDCRDAVFDLIALPVCMPDA 39
HG+ I+ + ++ D ++LIALP+ + DA
Sbjct: 167 HGIHILENVVLDHVADGDYELIALPLALSDA 197
>sp|A0REX1|KYNB_BACAH Kynurenine formamidase OS=Bacillus thuringiensis (strain Al Hakam)
GN=kynB PE=3 SV=1
Length = 209
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 9 HGVKIVADALVSDCRDAVFDLIALPVCMPDA 39
HG+ I+ + ++ D ++LIALP+ + DA
Sbjct: 167 HGIHILENVVLDHVADGDYELIALPLALSDA 197
>sp|Q736W4|KYNB_BACC1 Kynurenine formamidase OS=Bacillus cereus (strain ATCC 10987)
GN=kynB PE=3 SV=1
Length = 209
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 9 HGVKIVADALVSDCRDAVFDLIALPVCMPDA 39
HG+ I+ + ++ D ++LIALP+ + DA
Sbjct: 167 HGIHILENVVLDHVADGDYELIALPLALTDA 197
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,583,031
Number of Sequences: 539616
Number of extensions: 1659789
Number of successful extensions: 4876
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 4821
Number of HSP's gapped (non-prelim): 53
length of query: 145
length of database: 191,569,459
effective HSP length: 106
effective length of query: 39
effective length of database: 134,370,163
effective search space: 5240436357
effective search space used: 5240436357
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)