Query 045076
Match_columns 145
No_of_seqs 189 out of 1118
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 16:51:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045076.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045076hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e08_A DJ-1 beta; flavodoxin-l 100.0 6.3E-38 2.1E-42 220.2 13.4 141 3-145 44-185 (190)
2 4hcj_A THIJ/PFPI domain protei 100.0 1.7E-37 5.8E-42 215.9 14.8 132 1-134 44-175 (177)
3 4gdh_A DJ-1, uncharacterized p 100.0 1.2E-37 4.2E-42 219.6 13.0 142 2-145 44-191 (194)
4 3noq_A THIJ/PFPI family protei 100.0 5.6E-37 1.9E-41 221.4 15.5 141 1-145 42-182 (231)
5 3ewn_A THIJ/PFPI family protei 100.0 6.5E-37 2.2E-41 223.6 14.6 143 1-145 60-202 (253)
6 3ot1_A 4-methyl-5(B-hydroxyeth 100.0 7.9E-37 2.7E-41 217.5 13.0 141 3-145 48-190 (208)
7 3gra_A Transcriptional regulat 100.0 5.5E-37 1.9E-41 217.5 11.7 140 1-145 47-188 (202)
8 2rk3_A Protein DJ-1; parkinson 100.0 1.6E-36 5.4E-41 214.2 13.3 142 3-145 42-185 (197)
9 3er6_A Putative transcriptiona 100.0 2.5E-36 8.7E-41 215.1 13.4 141 1-145 51-196 (209)
10 3mgk_A Intracellular protease/ 100.0 1.6E-36 5.3E-41 216.4 12.3 141 1-145 42-185 (211)
11 2ab0_A YAJL; DJ-1/THIJ superfa 100.0 6.7E-36 2.3E-40 212.2 13.0 140 4-145 44-185 (205)
12 3bhn_A THIJ/PFPI domain protei 100.0 7.7E-35 2.6E-39 210.7 13.1 140 1-145 57-197 (236)
13 2vrn_A Protease I, DR1199; cys 100.0 3.1E-35 1.1E-39 206.3 10.4 137 2-139 46-188 (190)
14 3l18_A Intracellular protease 100.0 6.7E-35 2.3E-39 201.0 11.4 130 1-132 38-167 (168)
15 3fse_A Two-domain protein cont 100.0 2.5E-34 8.6E-39 218.8 11.3 141 2-144 47-189 (365)
16 3efe_A THIJ/PFPI family protei 100.0 5.8E-34 2E-38 203.3 12.4 139 1-144 49-191 (212)
17 3cne_A Putative protease I; st 100.0 1.7E-33 5.7E-38 195.2 12.3 128 2-132 40-174 (175)
18 1oi4_A Hypothetical protein YH 100.0 8.6E-33 2.9E-37 194.6 12.9 130 2-133 60-192 (193)
19 3f5d_A Protein YDEA; unknow pr 100.0 1.2E-32 4.1E-37 195.7 12.6 136 2-145 41-179 (206)
20 2fex_A Conserved hypothetical 100.0 4.6E-32 1.6E-36 190.0 12.7 135 1-139 38-176 (188)
21 1u9c_A APC35852; structural ge 100.0 1.7E-31 5.7E-36 191.7 9.6 125 11-136 74-224 (224)
22 3kkl_A Probable chaperone prot 100.0 1.3E-30 4.6E-35 189.3 9.7 128 8-136 80-239 (244)
23 3uk7_A Class I glutamine amido 100.0 1E-29 3.4E-34 196.0 12.2 131 4-136 67-201 (396)
24 1rw7_A YDR533CP; alpha-beta sa 100.0 1.6E-30 5.6E-35 188.8 7.2 124 9-133 81-236 (243)
25 1n57_A Chaperone HSP31, protei 100.0 7.8E-30 2.7E-34 189.6 8.0 128 10-138 124-283 (291)
26 3uk7_A Class I glutamine amido 100.0 6.3E-29 2.1E-33 191.6 12.6 130 4-135 260-393 (396)
27 3n7t_A Macrophage binding prot 100.0 1.5E-28 5E-33 178.8 11.3 123 12-135 90-244 (247)
28 1vhq_A Enhancing lycopene bios 99.9 1.7E-27 5.9E-32 171.8 4.6 132 4-142 61-218 (232)
29 3l3b_A ES1 family protein; ssg 99.9 3.7E-27 1.3E-31 170.9 3.9 117 3-120 77-217 (242)
30 1sy7_A Catalase 1; heme oxidat 99.8 1.2E-18 3.9E-23 141.9 8.9 115 1-133 570-697 (715)
31 3ttv_A Catalase HPII; heme ori 99.5 2E-14 7E-19 116.7 8.4 75 2-79 637-711 (753)
32 2iuf_A Catalase; oxidoreductas 99.3 6.9E-12 2.4E-16 101.5 7.8 66 14-80 571-652 (688)
33 3ej6_A Catalase-3; heme, hydro 99.1 1.1E-10 3.7E-15 94.5 6.4 65 15-80 579-650 (688)
34 3d54_D Phosphoribosylformylgly 98.7 1.1E-08 3.9E-13 71.9 3.6 58 24-82 39-101 (213)
35 1q7r_A Predicted amidotransfer 98.1 2.1E-06 7.1E-11 60.8 3.6 51 25-76 59-110 (219)
36 2nv0_A Glutamine amidotransfer 98.1 2E-06 6.7E-11 59.8 3.2 51 25-76 37-88 (196)
37 2iss_D Glutamine amidotransfer 98.0 3.6E-06 1.2E-10 59.1 3.0 51 25-76 56-107 (208)
38 3l7n_A Putative uncharacterize 97.8 3.2E-05 1.1E-09 55.3 5.9 51 25-76 44-100 (236)
39 2ywd_A Glutamine amidotransfer 97.8 1.2E-05 3.9E-10 55.5 3.5 51 25-76 38-90 (191)
40 2abw_A PDX2 protein, glutamina 97.7 1.6E-05 5.5E-10 56.4 3.2 50 26-76 43-96 (227)
41 1wl8_A GMP synthase [glutamine 97.7 1.6E-05 5.6E-10 54.7 2.9 46 26-76 43-88 (189)
42 1ka9_H Imidazole glycerol phos 97.7 4.1E-05 1.4E-09 53.2 4.6 50 25-76 39-91 (200)
43 3m3p_A Glutamine amido transfe 97.6 8.1E-05 2.8E-09 53.8 5.2 51 25-76 47-98 (250)
44 1o1y_A Conserved hypothetical 97.6 0.00012 4E-09 52.5 5.9 51 25-76 56-109 (239)
45 4gud_A Imidazole glycerol phos 97.4 2.5E-05 8.5E-10 54.7 0.5 49 26-76 40-88 (211)
46 1qdl_B Protein (anthranilate s 97.4 0.00013 4.5E-09 50.5 4.0 49 26-76 45-93 (195)
47 3ugj_A Phosphoribosylformylgly 97.4 0.00022 7.7E-09 61.9 6.0 58 24-82 1090-1159(1303)
48 1gpw_B Amidotransferase HISH; 97.4 0.00019 6.4E-09 49.8 4.7 50 25-76 41-93 (201)
49 1a9x_B Carbamoyl phosphate syn 97.4 0.0002 6.9E-09 54.7 4.8 48 25-76 230-277 (379)
50 2v4u_A CTP synthase 2; pyrimid 97.3 0.00033 1.1E-08 51.6 5.1 45 26-75 90-134 (289)
51 2a9v_A GMP synthase; structura 97.2 0.00051 1.8E-08 48.2 5.1 47 26-76 54-101 (212)
52 3fij_A LIN1909 protein; 11172J 97.0 0.00065 2.2E-08 49.0 4.5 50 25-76 60-124 (254)
53 2ywj_A Glutamine amidotransfer 97.0 0.00055 1.9E-08 46.8 3.7 48 25-76 36-84 (186)
54 3uow_A GMP synthetase; structu 96.9 0.0015 5.2E-08 52.2 5.6 59 16-76 40-99 (556)
55 3l4e_A Uncharacterized peptida 96.8 0.0006 2E-08 47.8 2.7 47 26-75 79-128 (206)
56 1fy2_A Aspartyl dipeptidase; s 96.8 0.00051 1.8E-08 48.8 2.1 50 26-76 79-129 (229)
57 2w7t_A CTP synthetase, putativ 96.7 0.002 6.8E-08 47.0 4.5 45 26-75 67-111 (273)
58 2h2w_A Homoserine O-succinyltr 96.6 0.0031 1.1E-07 46.9 5.2 57 19-75 104-163 (312)
59 2vdj_A Homoserine O-succinyltr 96.3 0.0028 9.5E-08 46.9 3.6 57 19-75 92-151 (301)
60 1jvn_A Glutamine, bifunctional 96.3 0.0027 9.3E-08 50.8 3.5 50 25-76 43-95 (555)
61 3r75_A Anthranilate/para-amino 96.3 0.0058 2E-07 49.7 5.3 50 25-76 485-537 (645)
62 3nva_A CTP synthase; rossman f 96.2 0.0066 2.3E-07 48.1 5.2 47 24-75 348-394 (535)
63 1l9x_A Gamma-glutamyl hydrolas 96.1 0.0048 1.6E-07 45.9 3.9 49 26-75 86-139 (315)
64 1s1m_A CTP synthase; CTP synth 96.0 0.011 3.9E-07 47.1 5.8 46 25-75 342-387 (545)
65 2vpi_A GMP synthase; guanine m 95.9 0.00036 1.2E-08 49.3 -3.0 47 25-76 66-112 (218)
66 1vco_A CTP synthetase; tetrame 95.7 0.015 5.1E-07 46.4 5.2 46 25-75 354-399 (550)
67 3tqi_A GMP synthase [glutamine 95.2 0.008 2.7E-07 47.8 2.1 56 16-76 43-98 (527)
68 1i1q_B Anthranilate synthase c 93.8 0.07 2.4E-06 36.4 4.0 45 27-76 48-92 (192)
69 3en0_A Cyanophycinase; serine 93.1 0.059 2E-06 39.6 3.0 47 26-75 110-160 (291)
70 2ywb_A GMP synthase [glutamine 92.1 0.031 1.1E-06 44.1 0.3 46 26-76 42-87 (503)
71 1gpm_A GMP synthetase, XMP ami 91.9 0.05 1.7E-06 43.1 1.3 46 26-76 50-95 (525)
72 2vxo_A GMP synthase [glutamine 91.5 0.016 5.5E-07 47.6 -2.0 47 25-76 71-117 (697)
73 2r47_A Uncharacterized protein 87.9 0.24 8.1E-06 32.9 1.8 53 26-80 84-136 (157)
74 3klb_A Putative flavoprotein; 76.0 1.6 5.4E-05 28.7 2.3 43 24-69 76-118 (162)
75 4ici_A Putative flavoprotein; 75.6 2 6.7E-05 28.6 2.7 43 24-69 85-127 (171)
76 3edo_A Flavoprotein, putative 67.0 4.9 0.00017 25.8 3.1 40 24-66 74-113 (151)
77 1wui_S Periplasmic [NIFE] hydr 65.8 7 0.00024 28.2 3.9 43 24-67 67-113 (267)
78 3i9v_6 NADH-quinone oxidoreduc 59.7 7.1 0.00024 26.5 2.9 39 24-67 72-110 (181)
79 1ffv_A CUTS, iron-sulfur prote 59.4 1.7 5.8E-05 29.0 -0.3 74 47-135 85-158 (163)
80 1h2a_S Hydrogenase; SO ligand, 57.9 12 0.00042 27.7 4.1 43 24-67 117-163 (317)
81 2fz5_A Flavodoxin; alpha/beta 56.4 15 0.00053 22.5 4.0 41 25-68 45-89 (137)
82 3myr_A Hydrogenase (NIFE) smal 56.4 12 0.00041 27.0 3.7 42 26-67 66-112 (269)
83 1yqw_A Periplasmic [NIFE] hydr 56.0 11 0.00038 27.1 3.5 41 26-67 69-113 (264)
84 3hrd_D Nicotinate dehydrogenas 55.7 2.5 8.7E-05 28.1 0.1 70 47-131 85-154 (160)
85 3fni_A Putative diflavin flavo 55.2 9.8 0.00034 24.7 3.0 39 26-69 56-97 (159)
86 1cc1_S Hydrogenase (small subu 53.4 17 0.00059 26.4 4.2 42 26-67 70-125 (283)
87 3rgw_S Membrane-bound hydrogen 53.2 17 0.00057 27.2 4.1 43 25-67 68-114 (339)
88 5nul_A Flavodoxin; electron tr 53.0 19 0.00065 22.3 4.0 72 25-110 44-119 (138)
89 2zuv_A Lacto-N-biose phosphory 51.7 29 0.00099 28.7 5.5 44 24-67 498-544 (759)
90 3vyw_A MNMC2; tRNA wobble urid 51.1 13 0.00045 27.3 3.3 59 19-78 179-240 (308)
91 1rm6_C 4-hydroxybenzoyl-COA re 50.2 1.9 6.5E-05 28.7 -1.2 67 53-134 90-156 (161)
92 1yq9_A Periplasmic [NIFE] hydr 49.6 16 0.00054 26.3 3.5 42 26-67 66-111 (264)
93 2a5l_A Trp repressor binding p 49.3 12 0.00043 24.7 2.8 41 26-69 71-118 (200)
94 3tty_A Beta-GAL, beta-galactos 46.8 35 0.0012 27.8 5.5 39 23-67 449-488 (675)
95 2q9u_A A-type flavoprotein; fl 45.6 25 0.00086 26.2 4.2 41 26-69 307-351 (414)
96 2ark_A Flavodoxin; FMN, struct 44.3 17 0.00059 24.0 2.9 39 26-67 52-96 (188)
97 3ayx_B Membrane-bound hydrogen 41.6 22 0.00074 25.9 3.1 42 26-67 75-120 (283)
98 3uqy_S Hydrogenase-1 small cha 41.1 17 0.00059 27.1 2.6 42 26-67 69-114 (335)
99 1obo_A Flavodoxin; electron tr 41.0 15 0.00051 23.7 2.1 43 25-69 45-90 (169)
100 1n62_A Carbon monoxide dehydro 40.7 4 0.00014 27.3 -0.8 70 48-132 87-156 (166)
101 3d7n_A Flavodoxin, WRBA-like p 40.1 18 0.00061 24.1 2.4 40 26-68 54-100 (193)
102 3qq5_A Small GTP-binding prote 38.3 39 0.0013 25.9 4.3 48 25-80 370-417 (423)
103 1rtt_A Conserved hypothetical 36.3 32 0.0011 22.6 3.3 40 26-68 72-117 (193)
104 2ohh_A Type A flavoprotein FPR 34.1 36 0.0012 25.2 3.5 41 26-69 307-353 (404)
105 2wpn_A Periplasmic [nifese] hy 34.0 22 0.00076 26.2 2.2 42 26-67 104-154 (317)
106 4dvc_A Thiol:disulfide interch 33.8 27 0.00094 22.4 2.5 31 105-135 153-183 (184)
107 2gk3_A Putative cytoplasmic pr 33.4 59 0.002 22.8 4.3 41 25-67 76-126 (256)
108 3b6i_A Flavoprotein WRBA; flav 33.0 20 0.0007 23.5 1.8 42 25-69 67-115 (198)
109 2zki_A 199AA long hypothetical 32.4 22 0.00074 23.5 1.8 41 26-69 70-117 (199)
110 1tk9_A Phosphoheptose isomeras 31.8 94 0.0032 20.0 5.0 36 26-67 110-145 (188)
111 1x92_A APC5045, phosphoheptose 30.6 1E+02 0.0034 20.2 5.0 36 26-67 113-148 (199)
112 2rmf_A Urocortin, HUCN1; CRF l 30.3 41 0.0014 16.7 2.1 24 117-140 2-25 (40)
113 2xbl_A Phosphoheptose isomeras 30.0 1E+02 0.0036 20.0 5.0 36 26-67 116-151 (198)
114 2j9r_A Thymidine kinase; TK1, 29.7 1.3E+02 0.0046 20.6 5.6 57 26-88 101-167 (214)
115 1t5b_A Acyl carrier protein ph 29.3 49 0.0017 21.6 3.3 40 26-68 86-141 (201)
116 1ydg_A Trp repressor binding p 29.1 30 0.001 23.1 2.1 41 26-69 78-125 (211)
117 1rli_A Trp repressor binding p 28.7 43 0.0015 21.6 2.8 41 26-69 71-125 (184)
118 2yva_A DNAA initiator-associat 28.5 1.1E+02 0.0039 19.8 5.0 36 26-67 109-144 (196)
119 3eeq_A Putative cobalamin bios 28.0 79 0.0027 23.4 4.4 70 47-135 43-118 (336)
120 3jx9_A Putative phosphoheptose 27.4 98 0.0034 20.5 4.4 38 24-67 75-112 (170)
121 3hly_A Flavodoxin-like domain; 27.3 61 0.0021 20.7 3.4 39 26-69 51-92 (161)
122 1ag9_A Flavodoxin; electron tr 27.3 68 0.0023 20.7 3.6 43 25-69 44-89 (175)
123 3trj_A Phosphoheptose isomeras 26.2 1.3E+02 0.0046 19.9 5.0 36 26-67 114-149 (201)
124 2ane_A ATP-dependent protease 25.7 45 0.0016 20.7 2.4 37 28-66 25-61 (125)
125 2l27_B Peptide agonist; CRF, E 25.7 19 0.00065 17.7 0.4 22 121-142 4-25 (38)
126 2him_A L-asparaginase 1; hydro 25.4 1.2E+02 0.004 22.7 4.9 37 26-64 253-289 (358)
127 2pd2_A Hypothetical protein ST 25.3 1.1E+02 0.0037 17.9 4.4 48 26-78 29-76 (108)
128 3kbq_A Protein TA0487; structu 25.2 70 0.0024 21.2 3.3 32 26-57 62-107 (172)
129 2i2w_A Phosphoheptose isomeras 24.8 1.1E+02 0.0037 20.4 4.4 36 26-67 131-166 (212)
130 1m3s_A Hypothetical protein YC 24.5 1.4E+02 0.005 19.1 5.0 36 26-67 79-114 (186)
131 3cvj_A Putative phosphoheptose 24.3 1.1E+02 0.0037 20.9 4.4 36 26-67 108-143 (243)
132 2xhz_A KDSD, YRBH, arabinose 5 23.0 1.4E+02 0.0047 19.1 4.5 36 26-67 96-131 (183)
133 1yob_A Flavodoxin 2, flavodoxi 22.7 68 0.0023 20.8 2.9 24 46-69 72-98 (179)
134 4hs4_A Chromate reductase; tri 22.6 88 0.003 20.9 3.5 40 26-68 73-118 (199)
135 1e5d_A Rubredoxin\:oxygen oxid 22.5 1.5E+02 0.0051 21.7 5.1 41 25-68 302-345 (402)
136 4gcm_A TRXR, thioredoxin reduc 22.4 21 0.00072 25.2 0.3 13 26-38 6-18 (312)
137 2fcr_A Flavodoxin; electron tr 22.3 41 0.0014 21.8 1.7 45 25-69 44-94 (173)
138 2an1_A Putative kinase; struct 21.1 86 0.0029 22.2 3.4 33 26-67 63-95 (292)
139 1mwq_A Hypothetical protein HI 21.1 1E+02 0.0034 18.0 3.2 20 45-64 24-43 (101)
140 2lnd_A De novo designed protei 21.0 74 0.0025 18.5 2.4 26 43-68 35-60 (112)
141 2hna_A Protein MIOC, flavodoxi 20.7 1.6E+02 0.0054 18.1 4.8 45 25-69 45-92 (147)
142 3f6r_A Flavodoxin; FMN binding 20.7 1.3E+02 0.0045 18.5 3.9 40 26-68 49-94 (148)
143 1t0i_A YLR011WP; FMN binding p 20.4 58 0.002 21.2 2.2 40 26-68 84-125 (191)
144 3p9z_A Uroporphyrinogen III co 20.3 41 0.0014 23.0 1.5 52 24-79 35-87 (229)
145 2nt2_A Protein phosphatase sli 20.0 1.1E+02 0.0037 18.9 3.4 24 46-69 68-91 (145)
No 1
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=100.00 E-value=6.3e-38 Score=220.22 Aligned_cols=141 Identities=34% Similarity=0.567 Sum_probs=130.2
Q ss_pred CeeeecCCCEEeccccccCCCCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhccccCCc
Q 045076 3 LRVDACHGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSWGLLKGL 82 (145)
Q Consensus 3 ~~v~~~~G~~i~~d~~~~~~~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~agll~g~ 82 (145)
++|++++|+.+.+|..++++++++||+||||||..+...+..++.+++||+++++++++|+++|+|+ ++|+++|+|+||
T Consensus 44 ~~v~~~~g~~i~~d~~l~~~~~~~~D~livpGG~~~~~~~~~~~~~~~~l~~~~~~~k~i~aiC~G~-~~La~aGlL~g~ 122 (190)
T 4e08_A 44 EAVKCSRDVQILPDTSLAQVASDKFDVVVLPGGLGGSNAMGESSLVGDLLRSQESGGGLIAAICAAP-TVLAKHGVASGK 122 (190)
T ss_dssp SCEECTTSCEEECSEETGGGTTCCCSEEEECCCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETTTH-HHHHHTTCSTTC
T ss_pred cceecCCCcEEECCCCHHHCCcccCCEEEECCCChHHHHhhhCHHHHHHHHHHHHCCCEEEEECHHH-HHHHHCCCcCCC
Confidence 6899999999999999999887789999999995455667789999999999999999999999975 689999999999
Q ss_pred eeecCcchhhhhcccCceecc-ccEEEeCCeEecCCcchHHHHHHHHHHHhcChhHHHHHhCCC
Q 045076 83 KATCYPSFMEQLAPACAATVE-SRVQQDGKVVTTRGPGTTMEFAVALVEQLYRKGKADEVSGPL 145 (145)
Q Consensus 83 ~~t~~~~~~~~l~~~~~~~~~-~~~v~dg~iiT~~g~~~~~~~~l~li~~~~g~~~a~~va~~~ 145 (145)
++|+||...+.|++ ++++++ +.+|+|||+|||+|+.+++||++++|++++|++.|+++++.|
T Consensus 123 ~~T~~~~~~~~l~~-~~~~~~~~~~v~dg~iiTs~g~~a~~d~al~li~~~~g~~~a~~va~~l 185 (190)
T 4e08_A 123 SLTSYPSMKPQLVN-NYSYVDDKTVVKDGNLITSRGPGTAYEFALKIAEELAGKEKVQEVAKGL 185 (190)
T ss_dssp EECCCGGGGGGSSS-SSEECSSCSEEEETTEEEECSGGGHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred eEEeCcCHHHHHhc-CCcccCCCcEEEECCEEECCChHHHHHHHHHHHHHhcCHHHHHHHHHhh
Confidence 99999999999977 488884 889999999999999999999999999999999999998754
No 2
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=100.00 E-value=1.7e-37 Score=215.85 Aligned_cols=132 Identities=20% Similarity=0.236 Sum_probs=124.3
Q ss_pred CCCeeeecCCCEEeccccccCCCCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhccccC
Q 045076 1 KQLRVDACHGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSWGLLK 80 (145)
Q Consensus 1 ~~~~v~~~~G~~i~~d~~~~~~~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~agll~ 80 (145)
++++|++++|+++.+|..++++++++||+|+||||+ ++..+..++.+.+||+++++++++|++||+|+ ++|+++|+|+
T Consensus 44 ~~~~v~~~~G~~v~~d~~l~~v~~~~yD~liiPGG~-g~~~l~~~~~~~~~l~~~~~~~k~iaaIC~g~-~~La~aGlL~ 121 (177)
T 4hcj_A 44 FIGTAQGKLGGMTNIDLLFSEVDAVEFDAVVFVGGI-GCITLWDDWRTQGLAKLFLDNQKIVAGIGSGV-VIMANAKILE 121 (177)
T ss_dssp SSEEEEETTSCEEEECEEGGGCCGGGCSEEEECCSG-GGGGGTTCHHHHHHHHHHHHTTCEEEEETTHH-HHHHHTTCCT
T ss_pred CCCeEeeCCCCEEecCccHHHCCHhHCCEEEECCCc-cHHHHhhCHHHHHHHHHHHHhCCEEEEecccH-HHHHHCCCCC
Confidence 357899999999999999999998899999999995 67788899999999999999999999999976 5899999999
Q ss_pred CceeecCcchhhhhcccCceeccccEEEeCCeEecCCcchHHHHHHHHHHHhcC
Q 045076 81 GLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVALVEQLYR 134 (145)
Q Consensus 81 g~~~t~~~~~~~~l~~~~~~~~~~~~v~dg~iiT~~g~~~~~~~~l~li~~~~g 134 (145)
||++|+||..++++++.|+.|+++++|+|||+||++|+.++++|++++|+.+.+
T Consensus 122 gr~~T~~~~~~~~l~~~ga~~~~~~vV~Dg~liTs~g~~~~~~~a~~lve~L~s 175 (177)
T 4hcj_A 122 EINVTCLSADESHVRHGNANIMSENVVVSGNIVTANGPTSSKDFANAVVGVLNS 175 (177)
T ss_dssp TCEECCCGGGHHHHHHTTCEECSSSEEEETTEEEECSGGGHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCHHHHHHhCCCEEecCCEEEECCEEECCCHHHHHHHHHHHHHHHhc
Confidence 999999999999998888899999999999999999999999999999999865
No 3
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=100.00 E-value=1.2e-37 Score=219.57 Aligned_cols=142 Identities=23% Similarity=0.302 Sum_probs=129.8
Q ss_pred CCeeeecCCCEEeccccccCCCC-----CCccEEEEcCCccChhccccChHHHHHHHHHHHC-CCeEEEEcchhHHHhhh
Q 045076 2 QLRVDACHGVKIVADALVSDCRD-----AVFDLIALPVCMPDATNLKESKVLETIVKKQASN-GRLYAAVCASPAVALGS 75 (145)
Q Consensus 2 ~~~v~~~~G~~i~~d~~~~~~~~-----~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~-~~~v~aic~g~~~~La~ 75 (145)
+.+|++++|+++.+|..+++++. ++||+||||||.+++..+..++.+.+||++++++ +++|+++|+|+ +|+.
T Consensus 44 ~~~v~~~~g~~v~~d~~~~~~~~~d~~~~~yD~lvvPGG~~~~~~l~~~~~l~~~l~~~~~~~~k~iaaiC~g~--~l~~ 121 (194)
T 4gdh_A 44 DRLVKMSRDVEMYANRSYKEIPSADDFAKQYDIAIIPGGGLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAGT--LTAK 121 (194)
T ss_dssp TCEEECTTSCEEECSEEGGGSCCHHHHHHHCSEEEECCCHHHHHHHHTCHHHHHHHHHHTTCTTCEEEEEGGGG--HHHH
T ss_pred CceEecCCCceeeccccHhhCCccccccccCCEEEECCCchhHhHhhhCHHHHHHHHHhhhcCCceEEeecccc--cchh
Confidence 35789999999999999998864 3599999999976778888999999999999865 79999999974 5888
Q ss_pred ccccCCceeecCcchhhhhcccCceeccccEEEeCCeEecCCcchHHHHHHHHHHHhcChhHHHHHhCCC
Q 045076 76 WGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVALVEQLYRKGKADEVSGPL 145 (145)
Q Consensus 76 agll~g~~~t~~~~~~~~l~~~~~~~~~~~~v~dg~iiT~~g~~~~~~~~l~li~~~~g~~~a~~va~~~ 145 (145)
+|+|+||++|+||...+++++.++.|+++++|+|||+|||+|+.++++|+++||++++|++.|++|++.|
T Consensus 122 aglL~gr~~T~~~~~~~~l~~~g~~~~d~~vV~Dg~iiTs~g~~~~~d~al~lve~l~G~~~a~~va~~l 191 (194)
T 4gdh_A 122 TSGLPNKQITGHPSVRGQLEEGGYKYLDQPVVLEENLITSQGPGTAMLFGLKLLEQVASKDKYNAVYKSL 191 (194)
T ss_dssp HTTCCCSEECCCGGGHHHHHHTTCEECCSSEEEETTEEEECSGGGHHHHHHHHHHHHSCHHHHHHHHHHT
T ss_pred hceecCCceEecCcHHHHHHhcCCeeecceEEEcCCEEECCCHhHHHHHHHHHHHHHcCHHHHHHHHhhc
Confidence 9999999999999999999888889999999999999999999999999999999999999999999865
No 4
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A
Probab=100.00 E-value=5.6e-37 Score=221.44 Aligned_cols=141 Identities=30% Similarity=0.438 Sum_probs=129.4
Q ss_pred CCCeeeecCCCEEeccccccCCCCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhccccC
Q 045076 1 KQLRVDACHGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSWGLLK 80 (145)
Q Consensus 1 ~~~~v~~~~G~~i~~d~~~~~~~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~agll~ 80 (145)
++++|++++|+.+.+|..+++++ +||+||||||. +...+..++.+++||+++++++++|++||+| .++|+++|||+
T Consensus 42 ~~~~V~~~~G~~v~~d~~l~~~~--~~D~livpGG~-g~~~~~~~~~l~~~lr~~~~~g~~v~aiC~G-~~~La~aGLL~ 117 (231)
T 3noq_A 42 EPGPVVASSGLVLQATTSFADCP--PLDVICIPGGT-GVGALMEDPQALAFIRQQAARARYVTSVSTG-SLVLGAAGLLQ 117 (231)
T ss_dssp SSEEEECTTSCEEEECEETTTCC--CCSEEEECCST-THHHHTTCHHHHHHHHHHHTTCSEEEEETTH-HHHHHHTTTTT
T ss_pred CCCcEEcCCCCEEecccChhHCC--cCCEEEECCCC-ChhhhccCHHHHHHHHHHHhcCCEEEEECHH-HHHHHHcCCCC
Confidence 46789999999999999999875 79999999994 6767788999999999999999999999997 57899999999
Q ss_pred CceeecCcchhhhhcccCceeccccEEEeCCeEecCCcchHHHHHHHHHHHhcChhHHHHHhCCC
Q 045076 81 GLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVALVEQLYRKGKADEVSGPL 145 (145)
Q Consensus 81 g~~~t~~~~~~~~l~~~~~~~~~~~~v~dg~iiT~~g~~~~~~~~l~li~~~~g~~~a~~va~~~ 145 (145)
||++|+||.+.+.+++.+..++++++|+|||+|||+|+.+++||+++||++++|++.|+++++.|
T Consensus 118 Gr~aTthw~~~~~l~~~~~~~~~~~vV~Dg~iiTs~G~~a~~d~aL~li~~~~G~~~A~~va~~l 182 (231)
T 3noq_A 118 GKRATTHWAYHELLAPLGAIPVHERVVRDGNLLTGGGITAGIDFALTLAAELFDAATAQRVQLQL 182 (231)
T ss_dssp TCEECCCGGGGGGTGGGTCEECCSSEEEETTEEEECSTTHHHHHHHHHHHHHSCHHHHHHHHHHT
T ss_pred CceeeecHhHHHHHHhCCCeeeCCcEEEeCCEEECCCHHHHHHHHHHHHHHHcCHHHHHHHHHhc
Confidence 99999999999999766666778899999999999999999999999999999999999998654
No 5
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV}
Probab=100.00 E-value=6.5e-37 Score=223.60 Aligned_cols=143 Identities=23% Similarity=0.286 Sum_probs=130.1
Q ss_pred CCCeeeecCCCEEeccccccCCCCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhccccC
Q 045076 1 KQLRVDACHGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSWGLLK 80 (145)
Q Consensus 1 ~~~~v~~~~G~~i~~d~~~~~~~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~agll~ 80 (145)
++++|++++|+.+.+|..+++++. .||+||||||..+...+..++.+++||+++++++++|++||+| .++|+++|||+
T Consensus 60 ~~~~V~~~~G~~i~~d~~l~~~~~-~yD~liVPGG~~g~~~l~~~~~l~~~Lr~~~~~gk~IaaICtG-~~lLa~AGLL~ 137 (253)
T 3ewn_A 60 SLDPVTSDAGLAIVPTATFGTCPR-DLTVLFAPGGTDGTLAAASDAETLAFMADRGARAKYITSVCSG-SLILGAAGLLK 137 (253)
T ss_dssp SSSCEECTTSCEECCSEETTTSCS-SCSEEEECCBSHHHHHHTTCHHHHHHHHHHHTTCSEEEEETTH-HHHHHHTTCCT
T ss_pred CCCeEEcCCCCEEeCCcCHHHcCC-CCCEEEECCCccchhhhccCHHHHHHHHHHHHcCCEEEEEChH-HHHHHHcCCCC
Confidence 467999999999999999998864 7999999999525566778999999999999999999999997 57899999999
Q ss_pred CceeecCcchhhhhcccCceeccccEEEeCCeEecCCcchHHHHHHHHHHHhcChhHHHHHhCCC
Q 045076 81 GLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVALVEQLYRKGKADEVSGPL 145 (145)
Q Consensus 81 g~~~t~~~~~~~~l~~~~~~~~~~~~v~dg~iiT~~g~~~~~~~~l~li~~~~g~~~a~~va~~~ 145 (145)
||++|+||...+.|++.+..++++++|+|||+|||+|+.+++||+++||++++|++.|+++++.|
T Consensus 138 Gr~aTthw~~~~~l~~~~~~~~~~~vV~Dg~iiTs~G~~a~idlaL~lv~~l~G~~~A~~va~~l 202 (253)
T 3ewn_A 138 GYKATSHWSCRDALAGFGAIPTEARVVRDRNRITGAGVTAGLDFGLSMVAELRDQTYAECAQLMS 202 (253)
T ss_dssp TCEECCCTTTGGGGGGGTCEECCSSEEEETTEEEECSTTHHHHHHHHHHHHHSCHHHHHHHHHHT
T ss_pred CCEEecCHHHHHHHHhCCCeeeCCcEEEECCEEECCCHHHHHHHHHHHHHHHcCHHHHHHHHHhc
Confidence 99999999999999866666778899999999999999999999999999999999999998754
No 6
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=100.00 E-value=7.9e-37 Score=217.50 Aligned_cols=141 Identities=30% Similarity=0.554 Sum_probs=127.9
Q ss_pred CeeeecCCCEEeccccccCCCCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhccccCCc
Q 045076 3 LRVDACHGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSWGLLKGL 82 (145)
Q Consensus 3 ~~v~~~~G~~i~~d~~~~~~~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~agll~g~ 82 (145)
++|++++|+.+.+|..++++++++||+||||||.+++..+..++.+++||+++++++++|++||+|++++|+++|||+||
T Consensus 48 ~~v~~~~G~~v~~d~~l~~~~~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~a~~La~aGlL~g~ 127 (208)
T 3ot1_A 48 LQVQGSRGVWLTAEQTLEACSAEAFDALALPGGVGGAQAFADSTALLALIDAFSQQGKLVAAICATPALVFAKQQKFVGA 127 (208)
T ss_dssp SEEECTTSCEEECSEEGGGCCGGGCSEEEECCCHHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHHHTTTTTTCSTTC
T ss_pred cceecCCCcEEeCCCCHHHCCCcCCCEEEECCCchHHHHHhhCHHHHHHHHHHHHcCCEEEEEChhHHHHHHHCCccCCC
Confidence 69999999999999999998777999999999964566678899999999999999999999999753689999999999
Q ss_pred eeecCcchhhhhcccCceeccccEEEe--CCeEecCCcchHHHHHHHHHHHhcChhHHHHHhCCC
Q 045076 83 KATCYPSFMEQLAPACAATVESRVQQD--GKVVTTRGPGTTMEFAVALVEQLYRKGKADEVSGPL 145 (145)
Q Consensus 83 ~~t~~~~~~~~l~~~~~~~~~~~~v~d--g~iiT~~g~~~~~~~~l~li~~~~g~~~a~~va~~~ 145 (145)
++|+||...+.+.+ .+|.++++++| ||+|||+|+.+++||++++|++++|++.|++|++.|
T Consensus 128 ~~T~~~~~~~~l~~--~~~~~~~vv~d~dg~iiTs~g~~a~~d~al~lv~~l~G~~~a~~va~~l 190 (208)
T 3ot1_A 128 RMTCHPNFFDHIPS--ERLSRQRVCYYATQHLLTSQGPGTALEFALAMIALLAGVELAQHVAAPM 190 (208)
T ss_dssp CBCCCGGGGGGSCT--TTBCCSSEEEEGGGTEEEECSGGGHHHHHHHHHHHHHCHHHHHHHHGGG
T ss_pred EEEECccHHHHccC--CccccCcEEEeCCCCEEECCCHHHHHHHHHHHHHHhcCHHHHHHHHHhh
Confidence 99999999998833 67777788875 499999999999999999999999999999999865
No 7
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida}
Probab=100.00 E-value=5.5e-37 Score=217.49 Aligned_cols=140 Identities=21% Similarity=0.251 Sum_probs=124.9
Q ss_pred CCCeeeecCCCEEeccccccCCCCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhccccC
Q 045076 1 KQLRVDACHGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSWGLLK 80 (145)
Q Consensus 1 ~~~~v~~~~G~~i~~d~~~~~~~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~agll~ 80 (145)
++++|++++|+++.+| .+++++.++||+||||||.. .... . +.+++||+++++++++|++||+| .++|+++|||+
T Consensus 47 ~~~~v~~~~G~~i~~d-~l~~~~~~~~D~livpGG~~-~~~~-~-~~l~~~l~~~~~~g~~iaaIC~G-~~~La~aGLL~ 121 (202)
T 3gra_A 47 DGDRVLSDLGLELVAT-ELSAAALKELDLLVVCGGLR-TPLK-Y-PELDRLLNDCAAHGMALGGLWNG-AWFLGRAGVLD 121 (202)
T ss_dssp SSSEEEBTTSCEEECE-ECCSGGGTTCSEEEEECCTT-CCSC-C-TTHHHHHHHHHHHTCEEEEETTH-HHHHHHHTCCT
T ss_pred CCCceEcCCCCEEECC-CcccccCCCCCEEEEeCCCc-hhhc-c-HHHHHHHHHHHhhCCEEEEECHH-HHHHHHcCCcC
Confidence 4679999999999999 99986666899999999963 3333 4 89999999999999999999997 57899999999
Q ss_pred CceeecCcchhhhhccc--CceeccccEEEeCCeEecCCcchHHHHHHHHHHHhcChhHHHHHhCCC
Q 045076 81 GLKATCYPSFMEQLAPA--CAATVESRVQQDGKVVTTRGPGTTMEFAVALVEQLYRKGKADEVSGPL 145 (145)
Q Consensus 81 g~~~t~~~~~~~~l~~~--~~~~~~~~~v~dg~iiT~~g~~~~~~~~l~li~~~~g~~~a~~va~~~ 145 (145)
||++|+||.+.+.|++. +..+.++.+|+|||+|||+|+.+++||+++||++++|++.|+++++.|
T Consensus 122 gr~aTth~~~~~~l~~~~p~~~~~~~~~v~dg~iiTs~G~~a~~dlal~li~~~~G~~~A~~va~~l 188 (202)
T 3gra_A 122 DYGCSIHPEQRASLSERSPQTRITPASFTLDRDRLSAASPNGAMELMLGLVRRLYGDGLAEGVEEIL 188 (202)
T ss_dssp TEEECCCGGGHHHHHHHCTTEEECSSSEEEETTEEEESSHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred CCcEEeChhHHHHHHHHCCCCEecCCeEEEeCCEEECCCHHHHHHHHHHHHHHHhCHHHHHHHHHHh
Confidence 99999999999988765 345677899999999999999999999999999999999999998754
No 8
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=100.00 E-value=1.6e-36 Score=214.19 Aligned_cols=142 Identities=36% Similarity=0.519 Sum_probs=128.5
Q ss_pred CeeeecCCCEEeccccccCC-CCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhccccCC
Q 045076 3 LRVDACHGVKIVADALVSDC-RDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSWGLLKG 81 (145)
Q Consensus 3 ~~v~~~~G~~i~~d~~~~~~-~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~agll~g 81 (145)
.+|++++|+.+.+|..++++ ++.+||+||||||..+...+..++.+++||+++++++++|++||+|+ ++|+++|+|+|
T Consensus 42 ~~v~~~~g~~v~~d~~l~~~~~~~~~D~livpGG~~~~~~l~~~~~~~~~l~~~~~~gk~i~aiC~G~-~~La~aGll~G 120 (197)
T 2rk3_A 42 DPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIATICAGP-TALLAHEIGFG 120 (197)
T ss_dssp SCEECTTSCEECCSEEHHHHHTTCCCSEEEECCCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETTTH-HHHHHTTCSTT
T ss_pred CccccCCCCEEeCCcCHHHcCCccCCCEEEECCCchhHHHhhhCHHHHHHHHHHHHcCCEEEEECHHH-HHHHHCCCCCC
Confidence 48999999999999999987 66699999999995345567789999999999999999999999975 68999999999
Q ss_pred ceeecCcchhhhhcccC-ceeccccEEEeCCeEecCCcchHHHHHHHHHHHhcChhHHHHHhCCC
Q 045076 82 LKATCYPSFMEQLAPAC-AATVESRVQQDGKVVTTRGPGTTMEFAVALVEQLYRKGKADEVSGPL 145 (145)
Q Consensus 82 ~~~t~~~~~~~~l~~~~-~~~~~~~~v~dg~iiT~~g~~~~~~~~l~li~~~~g~~~a~~va~~~ 145 (145)
|++|+||...+.+++.+ +.+.++.+++|||+|||+|+.+++||++++|+++.|++.|+++++.|
T Consensus 121 ~~~T~~~~~~~~l~~~~~~~~~~~~~v~Dg~iiTs~g~~a~~d~al~li~~l~g~~~a~~va~~~ 185 (197)
T 2rk3_A 121 SKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQVKAPL 185 (197)
T ss_dssp CEECCCGGGHHHHTTTSCSEECCCSEEEETTEEEECSGGGHHHHHHHHHHHHHCHHHHHHHHGGG
T ss_pred CEEEeCCcHHHHHhhcCCceeCCCCEEEeCCEEECCCHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 99999999999997653 34678899999999999999999999999999999999999999864
No 9
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=100.00 E-value=2.5e-36 Score=215.07 Aligned_cols=141 Identities=16% Similarity=0.154 Sum_probs=125.5
Q ss_pred CCCeeeecCCCEEeccccccCCCCCCccEEEEcCCccChhc--cccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhccc
Q 045076 1 KQLRVDACHGVKIVADALVSDCRDAVFDLIALPVCMPDATN--LKESKVLETIVKKQASNGRLYAAVCASPAVALGSWGL 78 (145)
Q Consensus 1 ~~~~v~~~~G~~i~~d~~~~~~~~~~~D~liipGG~~~~~~--~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~agl 78 (145)
++++|++++|+++.+|..+++++ +||+||||||. ++.. +..++.+++||+++++++++|++||+| .++|+++|+
T Consensus 51 ~~~~v~~~~G~~v~~d~~~~~~~--~~D~livpGg~-~~~~~~~~~~~~l~~~l~~~~~~g~~iaaIC~G-~~~La~aGL 126 (209)
T 3er6_A 51 NNRPLIGRGGISVQPTAQWQSFD--FTNILIIGSIG-DPLESLDKIDPALFDWIRELHLKGSKIVAIDTG-IFVVAKAGL 126 (209)
T ss_dssp TSSCEEETTTEEEECSSCGGGCS--CCSEEEECCCS-CHHHHGGGSCHHHHHHHHHHHHTTCEEEEETTH-HHHHHHHTC
T ss_pred CCCceecCCCeEEeCCcCccccC--CCCEEEECCCC-CchhhhccCCHHHHHHHHHHHhcCCEEEEEcHH-HHHHHHcCC
Confidence 46789999999999999999875 89999999995 4433 367999999999999999999999997 578999999
Q ss_pred cCCceeecCcchhhhhccc--Cceecc-ccEEEeCCeEecCCcchHHHHHHHHHHHhcChhHHHHHhCCC
Q 045076 79 LKGLKATCYPSFMEQLAPA--CAATVE-SRVQQDGKVVTTRGPGTTMEFAVALVEQLYRKGKADEVSGPL 145 (145)
Q Consensus 79 l~g~~~t~~~~~~~~l~~~--~~~~~~-~~~v~dg~iiT~~g~~~~~~~~l~li~~~~g~~~a~~va~~~ 145 (145)
|+||++|+||.+.+.|++. +..+.+ +.+|+|||+|||+|+.+++||+++||++++|++.|+++++.|
T Consensus 127 L~gr~aTth~~~~~~l~~~~p~~~~~~~~~~v~Dg~iiTs~G~~a~~dlal~li~~~~G~~~A~~va~~l 196 (209)
T 3er6_A 127 LQQNKAVMHSYFAHLFGELFPEIMLMTEQKALIDGNVYLSSGPYSHSSVMLEIVEEYFGKHTRNLGNQFL 196 (209)
T ss_dssp CSSCEECCCHHHHHHHHHHCTTSEECTTCSEEEETTEEEECCSSCCHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred CCCCeeEECHHHHHHHHHHCCCcEEecCCEEEEeCCEEECCcHHHHHHHHHHHHHHHhCHHHHHHHHHHh
Confidence 9999999999999999765 244554 469999999999999999999999999999999999999765
No 10
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum}
Probab=100.00 E-value=1.6e-36 Score=216.45 Aligned_cols=141 Identities=18% Similarity=0.288 Sum_probs=127.1
Q ss_pred CCCeeeecCCCEEeccccccCCCCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhccccC
Q 045076 1 KQLRVDACHGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSWGLLK 80 (145)
Q Consensus 1 ~~~~v~~~~G~~i~~d~~~~~~~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~agll~ 80 (145)
++++|++++|+.+.+|..+++.+ +||+||||||. +...+..++.+++||+++++++++|++||+| .++|+++|||+
T Consensus 42 ~~~~V~~~~G~~v~~d~~~~~~~--~~D~livpGG~-~~~~~~~~~~~~~~l~~~~~~~k~iaaiC~G-~~~La~aGLL~ 117 (211)
T 3mgk_A 42 DGGLVESSQKVRVETSLYTRDEN--IEKILFVPGGS-GTREKVNDDNFINFIGNMVKESKYIISVCTG-SALLSKAGILN 117 (211)
T ss_dssp SCEEEECTTCCEEEEBCCCCCSS--SEEEEEECCST-HHHHHTTCHHHHHHHHHHHHHCSEEEECTTH-HHHHHHTTTTT
T ss_pred CCCeEecCCCcEEEeccchhhCC--CCCEEEECCCc-chhhhcCCHHHHHHHHHHHHcCCEEEEEchH-HHHHHhcCCcC
Confidence 35789999999999999998876 69999999995 5666778999999999999999999999997 56899999999
Q ss_pred CceeecCcchhhhhcccC--ceec-cccEEEeCCeEecCCcchHHHHHHHHHHHhcChhHHHHHhCCC
Q 045076 81 GLKATCYPSFMEQLAPAC--AATV-ESRVQQDGKVVTTRGPGTTMEFAVALVEQLYRKGKADEVSGPL 145 (145)
Q Consensus 81 g~~~t~~~~~~~~l~~~~--~~~~-~~~~v~dg~iiT~~g~~~~~~~~l~li~~~~g~~~a~~va~~~ 145 (145)
||++|+||...+.|++.+ ..+. ++.+|+|||+|||+|+.+++||+++||++++|++.|++|++.|
T Consensus 118 Gr~~Tth~~~~~~l~~~~p~~~~~~~~~~v~Dg~iiTs~G~~a~~dlal~lv~~~~G~~~A~~va~~l 185 (211)
T 3mgk_A 118 GKRATTNKRSFKWVTEQNEDVLWVKEARWVKDGNIYTSSGVSAGIDMTLGFIEDLIGKEKALEISRSI 185 (211)
T ss_dssp TSEECCCSTTHHHHHTTCTTSEECSSCSEEEETTEEEECSHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred CCeEeeChhHHHHHHHHCCCcEEecCCeEEEeCCEEECCCHHHHHHHHHHHHHHHhCHHHHHHHHHhc
Confidence 999999999999998762 3454 6789999999999999999999999999999999999998753
No 11
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=100.00 E-value=6.7e-36 Score=212.25 Aligned_cols=140 Identities=31% Similarity=0.555 Sum_probs=128.1
Q ss_pred eeeecCCCEEeccccccCCCCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhccccCCce
Q 045076 4 RVDACHGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSWGLLKGLK 83 (145)
Q Consensus 4 ~v~~~~G~~i~~d~~~~~~~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~agll~g~~ 83 (145)
+|++++|+.+.+|..++++++++||+||||||..++..+..++.+.+||+++++++++|++||+|++++|+++|+|+||+
T Consensus 44 ~v~~~~g~~v~~~~~l~~~~~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~~~lLa~aGlL~G~~ 123 (205)
T 2ab0_A 44 AITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGN 123 (205)
T ss_dssp EEECTTSCEEECSEEHHHHTTSCCSEEEECCCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETHHHHHHTTTTTSSSSSC
T ss_pred eeecCCCeEEecCCCHHHCCcccCCEEEECCCcccHHHhccCHHHHHHHHHHHHcCCEEEEECHhHHHHHHHCCccCCCe
Confidence 89999999999999999887778999999999645666778999999999999999999999997636899999999999
Q ss_pred eecCcchhhhhcccCceeccccEEEeCCe--EecCCcchHHHHHHHHHHHhcChhHHHHHhCCC
Q 045076 84 ATCYPSFMEQLAPACAATVESRVQQDGKV--VTTRGPGTTMEFAVALVEQLYRKGKADEVSGPL 145 (145)
Q Consensus 84 ~t~~~~~~~~l~~~~~~~~~~~~v~dg~i--iT~~g~~~~~~~~l~li~~~~g~~~a~~va~~~ 145 (145)
+|+||.+.+.+.+ ..+.++++++|||+ |||+|+.++++|++++|+++.|++.|+++++.|
T Consensus 124 ~T~~~~~~~~~~~--~~~~~~~vv~Dg~i~viTs~g~~s~~d~al~li~~l~g~~~a~~va~~l 185 (205)
T 2ab0_A 124 MTGFPTLKDKIPA--EQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHEVASQL 185 (205)
T ss_dssp BCCCGGGGGGSCT--TTBCCCSEEEETTTTEEEECSGGGHHHHHHHHHHHHTCHHHHHHHHTTT
T ss_pred EEeCccHHHHccC--CEEecCCEEEeCCcCeEECcChhhHHHHHHHHHHHhcChHHHHHHHHhc
Confidence 9999998888854 56778889999999 999999999999999999999999999999876
No 12
>3bhn_A THIJ/PFPI domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.76A {Shewanella loihica pv-4}
Probab=100.00 E-value=7.7e-35 Score=210.70 Aligned_cols=140 Identities=19% Similarity=0.263 Sum_probs=125.7
Q ss_pred CCCeeeecCCCEEeccccccCCCCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCC-eEEEEcchhHHHhhhcccc
Q 045076 1 KQLRVDACHGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGR-LYAAVCASPAVALGSWGLL 79 (145)
Q Consensus 1 ~~~~v~~~~G~~i~~d~~~~~~~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~-~v~aic~g~~~~La~agll 79 (145)
++++|++++|+.+.+|..+++. .+||+||||||+.+...+..++.+++|| ++.+++ +|++||+|+ ++|+++|+|
T Consensus 57 ~~~~V~ss~G~~v~~d~~l~~~--~~~D~liVPGG~~g~~~l~~~~~l~~~L--~~~~~~~~IaaIC~G~-~lLa~AGLL 131 (236)
T 3bhn_A 57 TKPEHHSQLGMTVKTDGHVSEV--KEQDVVLITSGYRGIPAALQDENFMSAL--KLDPSRQLIGSICAGS-FVLHELGLL 131 (236)
T ss_dssp SSSEEEBTTCCEEECSEEGGGG--GGCSEEEECCCTTHHHHHHTCHHHHHHC--CCCTTTCEEEEETTHH-HHHHHTTTT
T ss_pred CCCcEEecCCcEEecCcccccc--cCCCEEEEcCCccCHhhhccCHHHHHHH--HhCCCCCEEEEEcHHH-HHHHHcCCC
Confidence 4679999999999999999874 4899999999943455577899999999 555666 999999975 689999999
Q ss_pred CCceeecCcchhhhhcccCceeccccEEEeCCeEecCCcchHHHHHHHHHHHhcChhHHHHHhCCC
Q 045076 80 KGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVALVEQLYRKGKADEVSGPL 145 (145)
Q Consensus 80 ~g~~~t~~~~~~~~l~~~~~~~~~~~~v~dg~iiT~~g~~~~~~~~l~li~~~~g~~~a~~va~~~ 145 (145)
+||++|+||...+.|++.+..+.++.+|+|||+|||+|+.+++||++++|++++|++.|+++++.|
T Consensus 132 ~Gr~aTth~~~~~~l~~~~p~~~~~~vV~Dg~iiTs~G~~a~~dlal~lIe~l~G~~~A~~va~~l 197 (236)
T 3bhn_A 132 KGKKLTTNPDAKAVLQGMGGDVQDLPLVIEGNIATAGGCLSLLYLVGWLAERLFDSVKRKQIQNQL 197 (236)
T ss_dssp TTCEECCCGGGHHHHHHTTCEECSSSEEEETTEEEECSGGGHHHHHHHHHHHHSCHHHHHHHHTTT
T ss_pred CCCEEECCHHHHHHHHHhCCccCCCcEEEeCCEEECCCHHHHHHHHHHHHHHhcCHHHHHHHHHhc
Confidence 999999999999999887667788899999999999999999999999999999999999999876
No 13
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=100.00 E-value=3.1e-35 Score=206.28 Aligned_cols=137 Identities=25% Similarity=0.323 Sum_probs=123.0
Q ss_pred CCeeee-----cCCCEEeccccccCCCCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhc
Q 045076 2 QLRVDA-----CHGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSW 76 (145)
Q Consensus 2 ~~~v~~-----~~G~~i~~d~~~~~~~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~a 76 (145)
+++|++ ++|+.+.+|..++++++.+||+||||||..++..+..++.+++||+++++++++|+++|+|+ ++|+++
T Consensus 46 ~~~v~~~~~~~~~g~~v~~~~~~~~~~~~~~D~livpGG~~~~~~~~~~~~l~~~l~~~~~~gk~i~aiC~G~-~~La~a 124 (190)
T 2vrn_A 46 PGEIQSMKGDIEPQEKYRVDHVVSEVQVSDYDGLLLPGGTVNPDKLRLEEGAMKFVRDMYDAGKPIAAICHGP-WSLSET 124 (190)
T ss_dssp SSEEEEEETTTEEEEEEECSEEGGGCCGGGCSEEEECCCTHHHHHHTTCHHHHHHHHHHHHTTCCEEEC-CTT-HHHHHT
T ss_pred CCccccccccccCCcEEeCCCChhhCChhhCCEEEECCCchhHHHHhhCHHHHHHHHHHHHcCCEEEEECHhH-HHHHhC
Confidence 567877 78999999999999876789999999995456666789999999999999999999999975 589999
Q ss_pred cccCCceeecCcchhhhhcccCceeccccEEEeCCeEecCCcchHHHHHHHHHHHh-cChhHHH
Q 045076 77 GLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVALVEQL-YRKGKAD 139 (145)
Q Consensus 77 gll~g~~~t~~~~~~~~l~~~~~~~~~~~~v~dg~iiT~~g~~~~~~~~l~li~~~-~g~~~a~ 139 (145)
|||+||++|+||.+.+.|++.+..++++++++|||+|||+|+.++++|++++|+++ .|++.|+
T Consensus 125 GlL~gr~~Tt~~~~~~~l~~~~~~~~~~~~v~Dg~iiTs~g~~s~~~~~l~li~~l~~g~~~a~ 188 (190)
T 2vrn_A 125 GIAQGLKMTSWSSLKRELTLAGAQWVDEECVTDKGVVTSRKPDDLPAFNKKIVEEFAEGDHSSR 188 (190)
T ss_dssp TTTTTCEECCCGGGHHHHHHTTCEECCCSCEEETTEEECSSGGGHHHHHHHHHHHHHHCCCGGG
T ss_pred cccCCcEEecCccHHHHHHHcCCeEECCCEEEcCCEEEcCChhhHHHHHHHHHHHHhccccccc
Confidence 99999999999999999988877888888888999999999999999999999999 8988775
No 14
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=100.00 E-value=6.7e-35 Score=200.98 Aligned_cols=130 Identities=22% Similarity=0.326 Sum_probs=119.8
Q ss_pred CCCeeeecCCCEEeccccccCCCCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhccccC
Q 045076 1 KQLRVDACHGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSWGLLK 80 (145)
Q Consensus 1 ~~~~v~~~~G~~i~~d~~~~~~~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~agll~ 80 (145)
++++|++++|+.+.+|..++++++.+||+|+||||. ++..+..++.+.+||+++++++++|+++|+|+ ++|+++|+|+
T Consensus 38 ~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~-~~~~~~~~~~l~~~l~~~~~~~k~i~aiC~G~-~~La~aGlL~ 115 (168)
T 3l18_A 38 QRGKITGKHGYSVNVDLTFEEVDPDEFDALVLPGGK-APEIVRLNEKAVMITRRMFEDDKPVASICHGP-QILISAKVLK 115 (168)
T ss_dssp SSEEEECTTSCEEEECEEGGGCCGGGCSEEEECCBS-HHHHHTTCHHHHHHHHHHHHTTCCEEEETTTH-HHHHHTTCCT
T ss_pred CCCEEecCCCcEEeccCChhHCCHhhCCEEEECCCc-CHHHhccCHHHHHHHHHHHHCCCEEEEECHhH-HHHHHCCccC
Confidence 357899999999999999999887789999999995 56667789999999999999999999999975 6899999999
Q ss_pred CceeecCcchhhhhcccCceeccccEEEeCCeEecCCcchHHHHHHHHHHHh
Q 045076 81 GLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVALVEQL 132 (145)
Q Consensus 81 g~~~t~~~~~~~~l~~~~~~~~~~~~v~dg~iiT~~g~~~~~~~~l~li~~~ 132 (145)
||++|+||...+.+++.+..++++.++.|||+|||+|+.++++|++++|+++
T Consensus 116 g~~~T~~~~~~~~l~~~~~~~~~~~~v~dg~iiT~~g~~~~~d~~l~li~~l 167 (168)
T 3l18_A 116 GRRGTSTITIRDDVINAGAEWIDAEVVVDGNWVSSRHPGDLYAWMREFVKLL 167 (168)
T ss_dssp TCEECCCGGGHHHHHHTTCEECCSSCEEETTEEEECSGGGHHHHHHHHGGGC
T ss_pred CCEEEeCccHHHHHHhCCCEEecCCEEEeCCEEEcCCHHHHHHHHHHHHHhh
Confidence 9999999999999988877788889999999999999999999999999875
No 15
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=100.00 E-value=2.5e-34 Score=218.75 Aligned_cols=141 Identities=24% Similarity=0.374 Sum_probs=130.3
Q ss_pred CCe-eeecCCC-EEeccccccCCCCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhcccc
Q 045076 2 QLR-VDACHGV-KIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSWGLL 79 (145)
Q Consensus 2 ~~~-v~~~~G~-~i~~d~~~~~~~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~agll 79 (145)
+++ |++++|+ .+.+|..++++++.+||+||||||. ++..+..++.+.+||+++++++++|++||+|+ ++|+++|||
T Consensus 47 ~g~~V~ss~G~~~i~~d~~l~~v~~~~~DaLiVPGG~-g~~~l~~~~~l~~~Lr~~~~~gk~IaAIC~G~-~lLA~AGLL 124 (365)
T 3fse_A 47 MNEKYKGKRGRLSTQADGTTTEAIASEFDAVVIPGGM-APDKMRRNPNTVRFVQEAMEQGKLVAAVCHGP-QVLIEGDLL 124 (365)
T ss_dssp SSCCEECTTSCCEECCSEETTTCCGGGCSEEEECCBT-HHHHHTTCHHHHHHHHHHHHTTCEEEEETTTH-HHHHHTTCC
T ss_pred CCceeecCCCceEEeCCCCHhhCCCcCCCEEEEECCc-chhhccCCHHHHHHHHHHHHCCCEEEEECHHH-HHHHHcCCc
Confidence 566 9999999 9999999999887789999999996 56667789999999999999999999999975 689999999
Q ss_pred CCceeecCcchhhhhcccCceeccccEEEeCCeEecCCcchHHHHHHHHHHHhcChhHHHHHhCC
Q 045076 80 KGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVALVEQLYRKGKADEVSGP 144 (145)
Q Consensus 80 ~g~~~t~~~~~~~~l~~~~~~~~~~~~v~dg~iiT~~g~~~~~~~~l~li~~~~g~~~a~~va~~ 144 (145)
+||++|+||.+.+.|++.+..++++++|+|||+|||+|+.++++|+++||+++.|.+.|+++++.
T Consensus 125 dGrraTthw~~~~~L~~~g~~~~d~~vV~DGniITs~G~~a~~d~al~lIe~L~g~~~A~~lA~~ 189 (365)
T 3fse_A 125 RGKQATGFIAISKDMMNAGADYLDEALVVDGNLITSREPGDLAIFTTAILSRLGYGGKDAALPDE 189 (365)
T ss_dssp TTCEECCCGGGHHHHHHTTCEECCSSCEEETTEEEECSGGGHHHHHHHHHHHTTCCCSSSCCCCT
T ss_pred CCCEEEeChHHHHHHHhCCCEEecCcEEEECCEEECCCHHHHHHHHHHHHHHhcCchHHHHHhhh
Confidence 99999999999999988778888899999999999999999999999999999999998888764
No 16
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=100.00 E-value=5.8e-34 Score=203.26 Aligned_cols=139 Identities=19% Similarity=0.270 Sum_probs=122.0
Q ss_pred CCCeeeecCCCEEeccccccCCCCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhccccC
Q 045076 1 KQLRVDACHGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSWGLLK 80 (145)
Q Consensus 1 ~~~~v~~~~G~~i~~d~~~~~~~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~agll~ 80 (145)
++++|++++|+.+.+|..++++++++||+||||||. +. .+..++.+++||+++++++++|++||+| .++|+++|+|+
T Consensus 49 ~~~~v~~~~G~~i~~d~~~~~~~~~~~D~livpGG~-~~-~~~~~~~l~~~l~~~~~~gk~iaaiC~G-~~~La~aGlL~ 125 (212)
T 3efe_A 49 NKEMITTMGGLRIKPDISLDECTLESKDLLILPGGT-TW-SEEIHQPILERIGQALKIGTIVAAICGA-TDALANMGYLD 125 (212)
T ss_dssp SSCCEECTTCCEECCSEEGGGCCCCTTCEEEECCCS-CT-TSGGGHHHHHHHHHHHHHTCEEEEETHH-HHHHHHTTTTS
T ss_pred CCCeEEcCCCCEEecCcCHHHCCccCCCEEEECCCC-cc-ccccCHHHHHHHHHHHHCCCEEEEEcHH-HHHHHHcCCCC
Confidence 357899999999999999999988899999999995 43 3578899999999999999999999997 56899999999
Q ss_pred CceeecCc-chhhhhccc--C-ceeccccEEEeCCeEecCCcchHHHHHHHHHHHhcChhHHHHHhCC
Q 045076 81 GLKATCYP-SFMEQLAPA--C-AATVESRVQQDGKVVTTRGPGTTMEFAVALVEQLYRKGKADEVSGP 144 (145)
Q Consensus 81 g~~~t~~~-~~~~~l~~~--~-~~~~~~~~v~dg~iiT~~g~~~~~~~~l~li~~~~g~~~a~~va~~ 144 (145)
||++|+|| .+.+.+++. + ..+.++.+|+|||+|||+|++ ++||+++||+++.|. .++++++.
T Consensus 126 Gr~~Tt~~~~~~~~l~~~~p~~~~~~~~~~V~Dg~iiTs~G~~-~~d~al~li~~l~g~-~a~~va~~ 191 (212)
T 3efe_A 126 TRKHTSNNLEYTKMVCPNYKGEKFYELGPAVSDANLVTASGIA-PLEFAMEVLKKIDVF-TLDALHSW 191 (212)
T ss_dssp SSCBCCSCHHHHHHHCTTCCCTTTBCCCSEEEETTEEEECTTC-HHHHHHHHHHHHTCS-CHHHHHHH
T ss_pred CCeeecCCHHHHHHHHhhCCCccccCCCcEEEECCEEECCCch-HHHHHHHHHHHhcCC-CHHHHHHH
Confidence 99999996 777777654 1 235678999999999999985 999999999999997 88888764
No 17
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=1.7e-33 Score=195.20 Aligned_cols=128 Identities=16% Similarity=0.317 Sum_probs=116.1
Q ss_pred CCeeeecCCCEEeccccccCC--CCCCccEEEEcCC--ccChhccc---cChHHHHHHHHHHHCCCeEEEEcchhHHHhh
Q 045076 2 QLRVDACHGVKIVADALVSDC--RDAVFDLIALPVC--MPDATNLK---ESKVLETIVKKQASNGRLYAAVCASPAVALG 74 (145)
Q Consensus 2 ~~~v~~~~G~~i~~d~~~~~~--~~~~~D~liipGG--~~~~~~~~---~~~~l~~~l~~~~~~~~~v~aic~g~~~~La 74 (145)
+++|++++|+.+.+|..++++ ++++||+|||||| .+++..+. .++.+++||+++++++++|++||+|+ ++|+
T Consensus 40 ~~~v~~~~g~~v~~d~~~~~~~~~~~~~D~livpGG~~~~~~~~l~~~~~~~~~~~~l~~~~~~gk~i~aiC~G~-~~La 118 (175)
T 3cne_A 40 TKEIKTNSGMVLIVDDVIANLKGHEDEFDALVFSCGDAVPVFQQYANQPYNVDLMEVIKTFGEKGKMMIGHCAGA-MMFD 118 (175)
T ss_dssp SSEEEBTTSCEEECSEEGGGGTTCGGGCSEEEEECCTTGGGGGGCTTCHHHHHHHHHHHHHHHTTCEEEEETTHH-HHHH
T ss_pred CCceecCCCeEEEeccCHHHhccCcccCCEEEECCCcCcccHHHHhhcccCHHHHHHHHHHHHCCCEEEEECHHH-HHHH
Confidence 368999999999999999987 6668999999999 54555555 78999999999999999999999975 6899
Q ss_pred hccccCCceeecCcchhhhhcccCceeccccEEEeCCeEecCCcchHHHHHHHHHHHh
Q 045076 75 SWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVALVEQL 132 (145)
Q Consensus 75 ~agll~g~~~t~~~~~~~~l~~~~~~~~~~~~v~dg~iiT~~g~~~~~~~~l~li~~~ 132 (145)
++|+|+||++|+||...+.+++ ..+.++.++.|||+|||+|+.+++||++++|+++
T Consensus 119 ~aGlL~G~~~T~~~~~~~~l~~--~~~~~~~~v~Dg~iiTs~g~~~~~d~al~li~~l 174 (175)
T 3cne_A 119 FTGITKGKKVAVHPLAKPAIQN--GIATDEKSEIDGNFFTAQDENTIWTMLPKVIEAL 174 (175)
T ss_dssp HTTTTTTCEEECCGGGGGGCCS--SEEESSSEEEETTEEEESSGGGGGGTHHHHHHHH
T ss_pred HCCCcCCCEEEeCccHHHHhhc--CEEeCCCEEEeCCEEeCCChHHHHHHHHHHHHHh
Confidence 9999999999999999999976 6778899999999999999999999999999986
No 18
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=100.00 E-value=8.6e-33 Score=194.57 Aligned_cols=130 Identities=22% Similarity=0.290 Sum_probs=118.8
Q ss_pred CCe-eeecCCC-EEeccccccCCCCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhcccc
Q 045076 2 QLR-VDACHGV-KIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSWGLL 79 (145)
Q Consensus 2 ~~~-v~~~~G~-~i~~d~~~~~~~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~agll 79 (145)
+++ |++++|+ .+.+|..++++++++||+||||||. ++..+..++.+.+||+++++++++|++||+|+ ++|+++|+|
T Consensus 60 ~~~~v~~~~g~~~v~~~~~l~~~~~~~~D~livpGG~-~~~~l~~~~~l~~~l~~~~~~gk~i~aIC~G~-~lLa~aGLL 137 (193)
T 1oi4_A 60 AGKTVKGKKGEASVTIDKSIDEVTPAEFDALLLPGGH-SPDYLRGDNRFVTFTRDFVNSGKPVFAICHGP-QLLISADVI 137 (193)
T ss_dssp TTCEEECTTSSCEEECCEEGGGCCGGGCSEEEECCBT-HHHHHTTSHHHHHHHHHHHHTTCCEEEETTTH-HHHHHHTCC
T ss_pred CCcceecCCCCeEEECCCChHHCCcccCCEEEECCCc-CHHHhhhCHHHHHHHHHHHHcCCEEEEECHHH-HHHHHCCcc
Confidence 455 9999999 9999999998876789999999994 56666778999999999999999999999975 689999999
Q ss_pred CCceeecCcchhhhhcccCceeccccEEEeCC-eEecCCcchHHHHHHHHHHHhc
Q 045076 80 KGLKATCYPSFMEQLAPACAATVESRVQQDGK-VVTTRGPGTTMEFAVALVEQLY 133 (145)
Q Consensus 80 ~g~~~t~~~~~~~~l~~~~~~~~~~~~v~dg~-iiT~~g~~~~~~~~l~li~~~~ 133 (145)
+||++|+||...+.|++.+..++++++++||| +|||+|+.++++|++++|+++.
T Consensus 138 ~Gr~~Tth~~~~~~l~~~~~~~~~~~~v~Dg~~iiTs~g~~~~~d~~l~li~~l~ 192 (193)
T 1oi4_A 138 RGRKLTAVKPIIIDVKNAGAEFYDQEVVVDKDQLVTSRTPDDLPAFNREALRLLG 192 (193)
T ss_dssp TTCEECCCGGGHHHHHHTTCEECCSSCEEETTTEEEESSGGGHHHHHHHHHHHHC
T ss_pred CCCEEEeChhHHHHHHHcCCEEecCCEEEECCEEEECCCcchHHHHHHHHHHHhh
Confidence 99999999999999988778888888999999 9999999999999999999874
No 19
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=100.00 E-value=1.2e-32 Score=195.69 Aligned_cols=136 Identities=21% Similarity=0.275 Sum_probs=115.2
Q ss_pred CCeeeecCCCEEeccccccCCCCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhccccCC
Q 045076 2 QLRVDACHGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSWGLLKG 81 (145)
Q Consensus 2 ~~~v~~~~G~~i~~d~~~~~~~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~agll~g 81 (145)
++ |++++|+.+.+|..++++ +++||+||||||. ++.. .++.+++||+++++++++|++||+|+ ++|+++|||+|
T Consensus 41 ~~-V~~~~G~~v~~d~~l~~~-~~~~D~livpGG~-~~~~--~~~~l~~~l~~~~~~gk~iaaiC~G~-~~La~aGLL~G 114 (206)
T 3f5d_A 41 PI-VSSIGGFKTSVDYIIGLE-PANFNLLVMIGGD-SWSN--DNKKLLHFVKTAFQKNIPIAAICGAV-DFLAKNGLLNN 114 (206)
T ss_dssp SE-EEBTTSCEEECSEETTSS-CSCCSEEEECCBS-CCCC--CCHHHHHHHHHHHHTTCCEEEETHHH-HHHHHTTTTTT
T ss_pred CC-EEecCCcEEecCcChhhC-CcCCCEEEEcCCC-Chhh--cCHHHHHHHHHHHHcCCEEEEECHHH-HHHHHcCCCCC
Confidence 45 899999999999999988 4689999999995 5544 89999999999999999999999975 68999999999
Q ss_pred ceeecCcch-hhhhc--ccCceeccccEEEeCCeEecCCcchHHHHHHHHHHHhcChhHHHHHhCCC
Q 045076 82 LKATCYPSF-MEQLA--PACAATVESRVQQDGKVVTTRGPGTTMEFAVALVEQLYRKGKADEVSGPL 145 (145)
Q Consensus 82 ~~~t~~~~~-~~~l~--~~~~~~~~~~~v~dg~iiT~~g~~~~~~~~l~li~~~~g~~~a~~va~~~ 145 (145)
|++|+||.. ...+. ..+..++++++|+|||+|||+|++ ++||+++||+++ +.+.|++|++.|
T Consensus 115 r~aTthw~~~~~~~~~~~~~~~~~~~~~V~Dg~iiTs~G~a-~id~al~li~~l-~~~~a~~va~~~ 179 (206)
T 3f5d_A 115 HSHTGNFVYLWKDYKQYKPISSFVEKQAVRDKNLVTANGTA-PIEFTNLILEMI-DFDTPENIEKMM 179 (206)
T ss_dssp SCBCCSCGGGGTTCTTCCCSSCBCCSSEEEETTEEEECTTC-HHHHHHHHHHHT-TCSCHHHHHHHH
T ss_pred CEEEccCHHHhhhhHhhcCCCeEccCCEEEECCEEECCCch-HHHHHHHHHHHh-CcchHHHHHHHh
Confidence 999999942 11111 124667788999999999999986 999999999975 578999988753
No 20
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=99.98 E-value=4.6e-32 Score=190.00 Aligned_cols=135 Identities=24% Similarity=0.322 Sum_probs=117.5
Q ss_pred CCCeeeecCCCEEeccccccCCCCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhccccC
Q 045076 1 KQLRVDACHGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSWGLLK 80 (145)
Q Consensus 1 ~~~~v~~~~G~~i~~d~~~~~~~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~agll~ 80 (145)
++++|++++|+.+.+|..++++++++||+||||||. +.. +..++.+++||+++++++++|++||+|+ ++|+++|+|+
T Consensus 38 ~~~~v~~~~g~~v~~~~~~~~~~~~~~D~livpGG~-~~~-~~~~~~l~~~l~~~~~~~k~i~aiC~G~-~~La~aGlL~ 114 (188)
T 2fex_A 38 DGMPVTSMGGLKVTPDTSYDALDPVDIDALVIPGGL-SWE-KGTAADLGGLVKRFRDRDRLVAGICAAA-SALGGTGVLN 114 (188)
T ss_dssp TSSCEECTTCCEEECSEEGGGCCTTTCSEEEECCBS-HHH-HTCCCCCHHHHHHHHHTTCEEEEETHHH-HHHHHTTTTT
T ss_pred CCCceeeCCCcEEeccccHHHCCcccCCEEEECCCC-ccc-ccccHHHHHHHHHHHHCCCEEEEECHHH-HHHHHCCCcC
Confidence 357899999999999999999887789999999995 333 4678999999999999999999999975 5899999999
Q ss_pred CceeecCcchhhhhccc--Cc-eecccc-EEEeCCeEecCCcchHHHHHHHHHHHhcChhHHH
Q 045076 81 GLKATCYPSFMEQLAPA--CA-ATVESR-VQQDGKVVTTRGPGTTMEFAVALVEQLYRKGKAD 139 (145)
Q Consensus 81 g~~~t~~~~~~~~l~~~--~~-~~~~~~-~v~dg~iiT~~g~~~~~~~~l~li~~~~g~~~a~ 139 (145)
||++|+||.....+++. +. .++++. +|+|||+||++|++ ++||++++|+++.|.+.++
T Consensus 115 gr~~T~~~~~~~~~~~~~~~~~~~~~~~~~v~Dg~iiTs~g~~-~~d~al~lv~~l~~~~~~~ 176 (188)
T 2fex_A 115 DVAHTGNALASHKAYPAYRGEAHYRDQPRAVSDGGVVTAAGSA-PVSFAVEILKSLGLFGPEA 176 (188)
T ss_dssp TSCBCCSCHHHHHTSTTCCCGGGBCCCSSCEEETTEEEECTTC-HHHHHHHHHHHTTCCSHHH
T ss_pred CccccCCcHHHHhhhhhcCCccceecCCCEEEECCEEECCCcc-HHHHHHHHHHHccCCCHHH
Confidence 99999999876666543 12 356778 99999999999996 8999999999999988775
No 21
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=99.97 E-value=1.7e-31 Score=191.65 Aligned_cols=125 Identities=25% Similarity=0.332 Sum_probs=109.0
Q ss_pred CEEeccccccCCCCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhcc------ccCCcee
Q 045076 11 VKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSWG------LLKGLKA 84 (145)
Q Consensus 11 ~~i~~d~~~~~~~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~ag------ll~g~~~ 84 (145)
+.+.++..++++++.+||+||||||......+..++.+.+||+++++++++|++||+|+ ++|+++| ||+||++
T Consensus 74 ~~i~~~~~l~~~~~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~~k~iaaiC~G~-~~La~ag~~~g~~lL~Gr~~ 152 (224)
T 1u9c_A 74 AALKHTARLSKDDAHGFDAIFLPGGHGTMFDFPDNETLQYVLQQFAEDGRIIAAVCHGP-SGLVNATYKDGTPIVKGKTV 152 (224)
T ss_dssp HHTTSBEECCGGGGSSCSEEEECCCTTHHHHSTTCHHHHHHHHHHHHTTCEEEEETTGG-GGGTTCBCTTSCBTTTTCEE
T ss_pred HhhcCCCChHHcChhhCCEEEECCCcchHHHhhcCHHHHHHHHHHHHCCCEEEEEChHH-HHHHHccccCCCceecCcEE
Confidence 67888889988876789999999996433457889999999999999999999999975 5899999 9999999
Q ss_pred ecCcchhhh---------------hcccCceecccc-----EEEeCCeEecCCcchHHHHHHHHHHHhcChh
Q 045076 85 TCYPSFMEQ---------------LAPACAATVESR-----VQQDGKVVTTRGPGTTMEFAVALVEQLYRKG 136 (145)
Q Consensus 85 t~~~~~~~~---------------l~~~~~~~~~~~-----~v~dg~iiT~~g~~~~~~~~l~li~~~~g~~ 136 (145)
|+||...+. |++.+..+++++ +|+|||+|||+|+.++++|+++||+++.|++
T Consensus 153 T~~~~~~~~~~~~~~~~p~~~~~~l~~~g~~~~~~~~~~~~vv~Dg~liTs~g~~s~~d~al~lv~~l~g~~ 224 (224)
T 1u9c_A 153 TSFTDEEEREVGLDVHMPFLLESTLRLRGANFVRGGKWTDFSVRDGNLITGQNPQSSRSTAEKVVAALEERE 224 (224)
T ss_dssp CCSCHHHHHHHTCGGGSSSCHHHHHHHTTCEECCCSTTSCCEEEETTEEEECSGGGHHHHHHHHHHHHHTTC
T ss_pred ecCCCHHHhhccccccCCccHHHHHHHcCCEEecCCCCCccEEEeCCEEECCChhhHHHHHHHHHHHHhccC
Confidence 999986653 555566777665 9999999999999999999999999999864
No 22
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=99.97 E-value=1.3e-30 Score=189.31 Aligned_cols=128 Identities=18% Similarity=0.237 Sum_probs=110.5
Q ss_pred cCCCEEeccccccCCCCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhc-------cccC
Q 045076 8 CHGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSW-------GLLK 80 (145)
Q Consensus 8 ~~G~~i~~d~~~~~~~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~a-------gll~ 80 (145)
+.+..+.++..++++++++||+||||||++.+.++..++.+.+||+++++++++|++||+|+. +|+++ |+|+
T Consensus 80 ~~~~~l~~~~~l~~v~~~~yD~l~vpGG~~~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~G~~-~La~a~~~~~g~gll~ 158 (244)
T 3kkl_A 80 AFNKALARIKTANEVNASDYKVFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPL-LFDGLIDIKTTRPLIE 158 (244)
T ss_dssp -CHHHHHTCEEGGGCCGGGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGG-GGTTCBCTTTSSBTTT
T ss_pred HHHHHhcCCCChHHCCHhhCCEEEEcCCCchhhhcccCHHHHHHHHHHHHcCCEEEEECHHHH-HHHHhhccccCCceeC
Confidence 445677888999999888999999999974446788999999999999999999999999875 79998 9999
Q ss_pred CceeecCcchhh-------------------hhcccCceecc------ccEEEeCCeEecCCcchHHHHHHHHHHHhcCh
Q 045076 81 GLKATCYPSFME-------------------QLAPACAATVE------SRVQQDGKVVTTRGPGTTMEFAVALVEQLYRK 135 (145)
Q Consensus 81 g~~~t~~~~~~~-------------------~l~~~~~~~~~------~~~v~dg~iiT~~g~~~~~~~~l~li~~~~g~ 135 (145)
||++|+||..++ .+++.|+.|++ ..+|+|||+||++|+.++++|+++||+.+.+.
T Consensus 159 G~~~T~~~~~ee~~~~~~~~~p~~~~~~l~~~l~~~Ga~~~~~~~~~~~~vV~Dg~lITg~gp~sa~~~a~~lv~~l~~~ 238 (244)
T 3kkl_A 159 GKAITGFPLEGEIALGVDDILRSRKLTTVERVANKNGAKYLAPIHPWDDYSITDGKLVTGVNANSSYSTTIRAINALYSV 238 (244)
T ss_dssp TCEECCSCHHHHHHHTTHHHHHHTTCCCHHHHHHTTTCEECCCSSTTSCCEEEETTEEEESSGGGHHHHHHHHHHHHTC-
T ss_pred CceecCCCcHHHHhhhhhhhccccccccHHHHHHHCCCEEecCCCCCCCCEEEeCCEEECCChHHHHHHHHHHHHHHhhh
Confidence 999999998743 34556778876 57999999999999999999999999999876
Q ss_pred h
Q 045076 136 G 136 (145)
Q Consensus 136 ~ 136 (145)
+
T Consensus 239 ~ 239 (244)
T 3kkl_A 239 E 239 (244)
T ss_dssp -
T ss_pred h
Confidence 5
No 23
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=99.96 E-value=1e-29 Score=196.00 Aligned_cols=131 Identities=21% Similarity=0.242 Sum_probs=119.3
Q ss_pred eeeecCCCEEeccccccCCCCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhccccCCce
Q 045076 4 RVDACHGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSWGLLKGLK 83 (145)
Q Consensus 4 ~v~~~~G~~i~~d~~~~~~~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~agll~g~~ 83 (145)
+++++.|+.+.++..++++++++||+||||||. ++..+..++.+.+||+++++++++|+++|+|+ ++|+++|+|+||+
T Consensus 67 ~~~~~~g~~i~~~~~~~~~~~~~~D~livpGG~-~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~-~~La~aGlL~g~~ 144 (396)
T 3uk7_A 67 TYFESRGHNFTLNATFDEVDLSKYDGLVIPGGR-APEYLALTASVVELVKEFSRSGKPIASICHGQ-LILAAADTVNGRK 144 (396)
T ss_dssp SCEEEECCCEECCSCGGGCCGGGCSEEEECCBS-HHHHHTTCHHHHHHHHHHHHTTCCEEEETTTH-HHHHHTTCCTTCE
T ss_pred hhhhccCceeeccCChhhcCcccCCEEEECCCc-chhhcccCHHHHHHHHHHHHcCCEEEEECchH-HHHHhccccCCCE
Confidence 567888999999999999877799999999995 56667789999999999999999999999975 6899999999999
Q ss_pred eecCcchhhhhcccCceeccc----cEEEeCCeEecCCcchHHHHHHHHHHHhcChh
Q 045076 84 ATCYPSFMEQLAPACAATVES----RVQQDGKVVTTRGPGTTMEFAVALVEQLYRKG 136 (145)
Q Consensus 84 ~t~~~~~~~~l~~~~~~~~~~----~~v~dg~iiT~~g~~~~~~~~l~li~~~~g~~ 136 (145)
+|+||.+.+.+++.|++|++. .+++|||+|||+|+.++++|+++||+++.|++
T Consensus 145 ~T~~~~~~~~l~~~g~~~~~~~~~~~~v~Dg~iiT~~g~~~~~d~al~li~~l~g~~ 201 (396)
T 3uk7_A 145 CTAYATVGPSLVAAGAKWVEPITPDVCVVDGSLITAATYEGHPEFIQLFVKALGGKI 201 (396)
T ss_dssp ECCCGGGHHHHHHTTCEECCCSSTTCEEEETTEEEESSGGGHHHHHHHHHHHTTCEE
T ss_pred eecCcchHHHHHHCCCEEECCCCCcceEecCCEEEecCcccHHHHHHHHHHHHhccc
Confidence 999999999998777777653 48999999999999999999999999999975
No 24
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=99.96 E-value=1.6e-30 Score=188.85 Aligned_cols=124 Identities=19% Similarity=0.250 Sum_probs=107.9
Q ss_pred CCCEEeccccccCCCCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhcc-------ccCC
Q 045076 9 HGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSWG-------LLKG 81 (145)
Q Consensus 9 ~G~~i~~d~~~~~~~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~ag-------ll~g 81 (145)
.|+.+.++..++++++++||+||||||.+.+.++..++.+.+||+++++++++|++||+|+. +|+++| ||+|
T Consensus 81 ~g~~l~~~~~l~~v~~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~vaaIC~G~~-~La~ag~~~~g~~lL~G 159 (243)
T 1rw7_A 81 FNKTLAKIKTPKEVNADDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGPA-IFDGLTDKKTGRPLIEG 159 (243)
T ss_dssp HHHHHHTCBCGGGCCGGGEEEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGG-GGTTCBCTTTSSBTTTT
T ss_pred HHhhhccCCChHHCCHhhCcEEEECCCCCchhhcccCHHHHHHHHHHHHcCCEEEEECCCHH-HHHhcCcccCCceeeCC
Confidence 35677788888888777999999999964456678899999999999999999999999864 899999 9999
Q ss_pred ceeecCcchhhh-------------------hcccCceec------cccEEEeCCeEecCCcchHHHHHHHHHHHhc
Q 045076 82 LKATCYPSFMEQ-------------------LAPACAATV------ESRVQQDGKVVTTRGPGTTMEFAVALVEQLY 133 (145)
Q Consensus 82 ~~~t~~~~~~~~-------------------l~~~~~~~~------~~~~v~dg~iiT~~g~~~~~~~~l~li~~~~ 133 (145)
|++|+||...+. +++.+..|+ ++.+|+|||+|||+|+.++++|+++||+++.
T Consensus 160 ~~~T~~~~~~e~~~~~~~~~p~~~~~~l~~~l~~~g~~~~~~~~~~~~~vV~Dg~liT~~g~~s~~d~al~lv~~l~ 236 (243)
T 1rw7_A 160 KSITGFTDVGETILGVDSILKAKNLATVEDVAKKYGAKYLAPVGPWDDYSITDGRLVTGVNPASAHSTAVRSIDALK 236 (243)
T ss_dssp CEECCSCHHHHHHTTCHHHHHHTTCCCHHHHHHHTTCEECCCSSTTSCCEEEETTEEEECSGGGHHHHHHHHHHCCC
T ss_pred cEEeecCCHHHhhccccccccccccccHHHHHHHcCCEEEcCCCCCCCCEEEeCCEEECCChhHHHHHHHHHHHHHh
Confidence 999999986665 444467777 6789999999999999999999999999874
No 25
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=99.96 E-value=7.8e-30 Score=189.58 Aligned_cols=128 Identities=18% Similarity=0.265 Sum_probs=109.1
Q ss_pred CCEEeccccccCC-----CCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhc----cccC
Q 045076 10 GVKIVADALVSDC-----RDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSW----GLLK 80 (145)
Q Consensus 10 G~~i~~d~~~~~~-----~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~a----gll~ 80 (145)
|+.+.++..++++ ++++||+||||||.+....+..++.+.+||+++++++++|++||+|+. +|+++ |||+
T Consensus 124 g~~l~~~~~l~~v~~~~~~~~~yD~livPGG~g~~~~l~~~~~l~~~l~~~~~~gk~VaaIC~Gp~-~La~a~~~~GLL~ 202 (291)
T 1n57_A 124 KSLFRNPKKLADVVASLNADSEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRFVISLCHGPA-AFLALRHGDNPLN 202 (291)
T ss_dssp HHHHHSCEEHHHHHHTCCTTCSEEEEEECCSGGGGSSGGGCHHHHHHHHHHHHTTCEEEEETTGGG-GGGGGTTSCCTTT
T ss_pred cceecCCccHHHHhhhccCcccCCEEEecCCcchhhhhhhCHHHHHHHHHHHHcCCEEEEECccHH-HHHhhcccCccCC
Confidence 7778888888873 456999999999963333678899999999999999999999999865 67777 5999
Q ss_pred CceeecCcchhhhhcc-------------------cCceec----cccEEEeCCeEecCCcchHHHHHHHHHHHhcChhH
Q 045076 81 GLKATCYPSFMEQLAP-------------------ACAATV----ESRVQQDGKVVTTRGPGTTMEFAVALVEQLYRKGK 137 (145)
Q Consensus 81 g~~~t~~~~~~~~l~~-------------------~~~~~~----~~~~v~dg~iiT~~g~~~~~~~~l~li~~~~g~~~ 137 (145)
||++|+||...+.+++ .|+.++ +..+|+|||+|||+|+.++++|+++||+++.|.+.
T Consensus 203 Gr~~Tt~~~~~e~~~~~~~~~~~~~P~~le~~L~~~ga~~~~~~~~~~vV~Dg~lITs~gp~s~~d~al~lve~l~g~~~ 282 (291)
T 1n57_A 203 GYSICAFPDAADKQTPEIGYMPGHLTWYFGEELKKMGMNIINDDITGRVHKDRKLLTGDSPFAANALGKLAAQEMLAAYA 282 (291)
T ss_dssp TCEECCCCGGGGGTTTTTTSSSSCCSSCHHHHHHHTTCEECCSSCSCCEEEETTEEEESSGGGHHHHHHHHHHHHHHHHC
T ss_pred CCEEEeCCCHHHhhhccccccccccchhHHHHHHHCCCEEECCCCCCCEEEeCCEEECCCHHHHHHHHHHHHHHHhCchh
Confidence 9999999998877642 256777 77899999999999999999999999999998764
Q ss_pred H
Q 045076 138 A 138 (145)
Q Consensus 138 a 138 (145)
.
T Consensus 283 ~ 283 (291)
T 1n57_A 283 G 283 (291)
T ss_dssp C
T ss_pred h
Confidence 3
No 26
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=99.96 E-value=6.3e-29 Score=191.56 Aligned_cols=130 Identities=22% Similarity=0.268 Sum_probs=118.4
Q ss_pred eeeecCCCEEeccccccCCCCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhccccCCce
Q 045076 4 RVDACHGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSWGLLKGLK 83 (145)
Q Consensus 4 ~v~~~~G~~i~~d~~~~~~~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~agll~g~~ 83 (145)
.++++.|+.+.++..++++++++||+||||||. +...+..++.+++||+++++++++|++||+|+ ++|+++|+|+||+
T Consensus 260 ~~~~~~g~~i~~~~~~~~~~~~~~D~livpGg~-~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~g~-~~La~aGlL~g~~ 337 (396)
T 3uk7_A 260 TYSEKPGHTFALTTNFDDLVSSSYDALVIPGGR-APEYLALNEHVLNIVKEFMNSEKPVASICHGQ-QILAAAGVLKGRK 337 (396)
T ss_dssp SCEEEECCCEECCSCGGGCCGGGCSEEEECCBS-HHHHHTTCHHHHHHHHHHHHTTCCEEEEGGGH-HHHHHTTTTTTCE
T ss_pred hhhhcCCceeeccCCHHHCCcccCCEEEECCCc-chhhhccCHHHHHHHHHHHHCCCEEEEEchHH-HHHHHcCCcCCCE
Confidence 367889999999999999887799999999995 56667789999999999999999999999975 6899999999999
Q ss_pred eecCcchhhhhcccCceeccc----cEEEeCCeEecCCcchHHHHHHHHHHHhcCh
Q 045076 84 ATCYPSFMEQLAPACAATVES----RVQQDGKVVTTRGPGTTMEFAVALVEQLYRK 135 (145)
Q Consensus 84 ~t~~~~~~~~l~~~~~~~~~~----~~v~dg~iiT~~g~~~~~~~~l~li~~~~g~ 135 (145)
+|+||...+.++..+..|+++ ++|+|||+|||+|+.+++||++++|+++.|.
T Consensus 338 ~T~~~~~~~~~~~~~~~~~~~~~~~~~v~Dg~iiTs~g~~~~~d~~l~li~~l~~~ 393 (396)
T 3uk7_A 338 CTAYPAVKLNVVLGGGTWLEPDPIDRCFTDGNLVTGAAWPGHPEFVSQLMALLGIQ 393 (396)
T ss_dssp ECCCGGGHHHHHHTTCEECCCSSTTCEEEETTEEEESSGGGHHHHHHHHHHHHTCE
T ss_pred EecCccHHHHHHHCCCEEEcCCCceeEEEcCCEEECCCchhHHHHHHHHHHHhccc
Confidence 999999999887777888775 5999999999999999999999999999875
No 27
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=99.96 E-value=1.5e-28 Score=178.76 Aligned_cols=123 Identities=20% Similarity=0.200 Sum_probs=106.0
Q ss_pred EEec-cccccCCCCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhc------cccCCcee
Q 045076 12 KIVA-DALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSW------GLLKGLKA 84 (145)
Q Consensus 12 ~i~~-d~~~~~~~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~a------gll~g~~~ 84 (145)
.+.+ +..++++++++||+||||||++...++..++.+.+||+++++++++|++||+|++ +|+++ |+|+||++
T Consensus 90 ~l~~~~~~l~~v~~~~yD~l~ipGG~g~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~Gp~-~La~a~~~~g~gll~G~~~ 168 (247)
T 3n7t_A 90 KMNKQVFKAGDLAPHDYGLMFVCGGHGALYDFPHAKHLQNIAQDIYKRGGVIGAVCHGPA-MLPGIHDENGDSVIKDKTV 168 (247)
T ss_dssp HHHHCCEEGGGSCGGGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGG-GGGGCBCTTSSBTTTTCEE
T ss_pred HHhccCCCHHHCChhhCCEEEEeCCCchhhhcccCHHHHHHHHHHHHcCCEEEEEChHHH-HHHHhhcccCCccccCcee
Confidence 3455 7788898888999999999963336688999999999999999999999999875 79998 99999999
Q ss_pred ecCcchhhh-------------------hcccCceecc------ccEEEeCCeEecCCcchHHHHHHHHHHHhcCh
Q 045076 85 TCYPSFMEQ-------------------LAPACAATVE------SRVQQDGKVVTTRGPGTTMEFAVALVEQLYRK 135 (145)
Q Consensus 85 t~~~~~~~~-------------------l~~~~~~~~~------~~~v~dg~iiT~~g~~~~~~~~l~li~~~~g~ 135 (145)
|+||...+. +++.|+.|++ ..+|+|||+||++|+.++++|+++||+.+.+.
T Consensus 169 T~~~~~ee~~~~~~~~~p~~~~~~l~~~l~~~Ga~~~~~~~~~~~~vV~Dg~lITg~~p~sa~~~a~~lv~~L~~~ 244 (247)
T 3n7t_A 169 TGFTTKGEIMIKVIDKMREDHLHTIADMAQTANAEYVPPEDPWDDFCKVDGRIVTGANPQSATNTARDTIKVYEGI 244 (247)
T ss_dssp CCCCHHHHHHTTCHHHHHHTTCCCHHHHHHHTTCEECCCSSTTSCCEEEETTEEEECSGGGHHHHHHHHHHHHHHH
T ss_pred cCCCcHHHhhhhhhhhccccchhhHHHHHHHCCCEEecCCcCCCceEEEcCCEEECCChHHHHHHHHHHHHHHhhh
Confidence 999997543 4455777876 47999999999999999999999999998643
No 28
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=99.94 E-value=1.7e-27 Score=171.81 Aligned_cols=132 Identities=22% Similarity=0.248 Sum_probs=107.6
Q ss_pred eeeecCCCEEecc-------ccccCCCCCCccEEEEcCCccChhcc----------ccChHHHHHHHHHHHCCCeEEEEc
Q 045076 4 RVDACHGVKIVAD-------ALVSDCRDAVFDLIALPVCMPDATNL----------KESKVLETIVKKQASNGRLYAAVC 66 (145)
Q Consensus 4 ~v~~~~G~~i~~d-------~~~~~~~~~~~D~liipGG~~~~~~~----------~~~~~l~~~l~~~~~~~~~v~aic 66 (145)
+++++.|+.+.++ ..++++++++||+||||||.+...++ ..++.+.+||+++++++++|++||
T Consensus 61 ~~~~~~g~~i~~~~~~~~~~~~l~~~~~~~~D~livpGG~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~gk~vaaIC 140 (232)
T 1vhq_A 61 AMTETRNVLIEAARITRGEIRPLAQADAAELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMC 140 (232)
T ss_dssp BCSCCCBHHHHHTTTTTTCCEEGGGCCGGGCSEEEECCSTHHHHTSBCHHHHGGGCCBCHHHHHHHHHHHHTTCCEEEET
T ss_pred chhhhhhhhHHHHHhhhcCCCCHHHcCcccCCEEEECCCcchHHHHhhhhccccccccCHHHHHHHHHHHHcCCEEEEEC
Confidence 3478889988888 88888777789999999996432212 248999999999999999999999
Q ss_pred chhHHHhhhccccC-CceeecC-c-chhhhhcccCceeccc---cEEEe--CCeEecCCcchHHHHHHHHHHHhcChhH-
Q 045076 67 ASPAVALGSWGLLK-GLKATCY-P-SFMEQLAPACAATVES---RVQQD--GKVVTTRGPGTTMEFAVALVEQLYRKGK- 137 (145)
Q Consensus 67 ~g~~~~La~agll~-g~~~t~~-~-~~~~~l~~~~~~~~~~---~~v~d--g~iiT~~g~~~~~~~~l~li~~~~g~~~- 137 (145)
+|+ ++|+++ |+ ||++|+| | .+.+.|++.|..|++. .+++| ||+|||+ +++++++||+++.|.+.
T Consensus 141 ~G~-~~La~a--L~~Gr~~Tth~~~~~~~~l~~~g~~~~~~~~~~~~vd~dg~liTs~----~~d~al~lv~~~~G~~~~ 213 (232)
T 1vhq_A 141 IAP-AMLPKI--FDFPLRLTIGTDIDTAEVLEEMGAEHVPCPVDDIVVDEDNKIVTTP----AYMLAQNIAEAASGIDKL 213 (232)
T ss_dssp TGG-GGHHHH--CSSCCEECCCSCHHHHHHHHHTTCEECCCCTTCCEEETTTTEEEEC----GGGTCSSHHHHHHHHHHH
T ss_pred HHH-HHHHHH--hcCCCEEeccCCHHHHHHHHHcCCEEecCCCCceEEecCCCEEECC----CHHHHHHHHHHHcCHHHH
Confidence 986 589998 79 9999999 5 6788888777777653 55555 9999997 88899999999999974
Q ss_pred HHHHh
Q 045076 138 ADEVS 142 (145)
Q Consensus 138 a~~va 142 (145)
++++.
T Consensus 214 ~~~~~ 218 (232)
T 1vhq_A 214 VSRVL 218 (232)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 29
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=99.93 E-value=3.7e-27 Score=170.91 Aligned_cols=117 Identities=15% Similarity=0.120 Sum_probs=97.7
Q ss_pred CeeeecCCCEEecc-------ccccCCCCCCccEEEEcCCccChhc-----------cccChHHHHHHHHHHHCCCeEEE
Q 045076 3 LRVDACHGVKIVAD-------ALVSDCRDAVFDLIALPVCMPDATN-----------LKESKVLETIVKKQASNGRLYAA 64 (145)
Q Consensus 3 ~~v~~~~G~~i~~d-------~~~~~~~~~~~D~liipGG~~~~~~-----------~~~~~~l~~~l~~~~~~~~~v~a 64 (145)
.+++++.|+.+.+| ..++++++++||+||||||.+...+ +..++.+.+||+++++++++|++
T Consensus 77 ~~v~~s~g~~v~~d~~~~~~~~~l~dv~~~~~D~livPGG~~~~~~L~~~~~~~~~~~~~~~~l~~~lr~~~~~gk~Iaa 156 (242)
T 3l3b_A 77 ESVGEVRNILVESARIARGSVYDIEQIRVEEFDMLVIPGGYGVAKNFSNLFDEDKENDYILPEFKNAVREFYNAKKPIGA 156 (242)
T ss_dssp EEESCCCBHHHHHHHHTTTCEEEGGGCCGGGCSEEEECCCHHHHHHHBSTTSCC--CCCBCHHHHHHHHHHHHTTCCEEE
T ss_pred ccccccCCeEEecchhccccCCChHHCCcccCCEEEEcCCcchhhhhhhhhccccccccCCHHHHHHHHHHHHcCCEEEE
Confidence 46888899999988 7899988789999999999643222 25679999999999999999999
Q ss_pred EcchhHHHhhhcc-ccCCceeecCcchhhhhcccCceecc---ccEEEe--CCeEecCCcch
Q 045076 65 VCASPAVALGSWG-LLKGLKATCYPSFMEQLAPACAATVE---SRVQQD--GKVVTTRGPGT 120 (145)
Q Consensus 65 ic~g~~~~La~ag-ll~g~~~t~~~~~~~~l~~~~~~~~~---~~~v~d--g~iiT~~g~~~ 120 (145)
||+|+ ++|+++| +|+||++|+||.....+++.|+.|++ +++|+| ||+||++++..
T Consensus 157 IC~G~-~~La~ag~lL~Gr~~T~~~~~~~~l~~~Ga~~~~~~~~~vVvD~~g~liTs~a~~~ 217 (242)
T 3l3b_A 157 VCISP-AVVVALLKDIAKVKVTIGEDSNGLIDKMGGVHVDCPTIKSVKDDVNRIFSCSAYMR 217 (242)
T ss_dssp ETTHH-HHHHHHHTTTCCCEECCCC----CHHHHTCEECCCCTTCCEEETTTTEEEECGGGS
T ss_pred ECHHH-HHHHHhCcccCCCEEEecCChHHHHHHCCCEEEcCCCCeEEEECCCCEEECcCccc
Confidence 99976 5899999 99999999999988888888888887 579999 99999998753
No 30
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=99.76 E-value=1.2e-18 Score=141.89 Aligned_cols=115 Identities=15% Similarity=0.145 Sum_probs=96.5
Q ss_pred CCCeeeecCCCEEeccccccCCCCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhc-ccc
Q 045076 1 KQLRVDACHGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSW-GLL 79 (145)
Q Consensus 1 ~~~~v~~~~G~~i~~d~~~~~~~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~a-gll 79 (145)
++++|+++.|+.+.+|..+++++..+||+||||||..++..+..++.+++||+++++++++|++||+|+ ++|+++ ||.
T Consensus 570 ~gg~V~ss~G~~v~~d~~l~~v~~~~yDaViVPGG~~~~~~l~~~~~l~~~Lr~~~~~gK~IaAIC~G~-~lLA~AlGL~ 648 (715)
T 1sy7_A 570 RRSKVTAANGSTVQPHHHLEGFRSTMVDAIFIPGGAKAAETLSKNGRALHWIREAFGHLKAIGATGEAV-DLVAKAIALP 648 (715)
T ss_dssp CSSCEEBTTSCEECCSEETTTCCGGGSSEEEECCCHHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHH-HHHHHHHCCT
T ss_pred CCCceecCCCceEecccccccCCcccCCEEEEcCCcccHhhhccCHHHHHHHHHHHhCCCEEEEECHHH-HHHHHccCcH
Confidence 357899999999999999999877789999999995456667889999999999999999999999975 689999 983
Q ss_pred CCceeecCcchhhhhcccCceeccccEEEeCCeEecCCcc------------hHHHHHHHHHHHhc
Q 045076 80 KGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPG------------TTMEFAVALVEQLY 133 (145)
Q Consensus 80 ~g~~~t~~~~~~~~l~~~~~~~~~~~~v~dg~iiT~~g~~------------~~~~~~l~li~~~~ 133 (145)
.+++.|. +.+|+||++||++|+. +..+|+.++++.+.
T Consensus 649 -------------~L~~aGa----~~VVvDg~lITs~gp~~~~l~~~~~i~~s~~~fa~~fi~~L~ 697 (715)
T 1sy7_A 649 -------------QVTVSSE----AEVHESYGVVTLKKVKPESFTDAVKIAKGAAGFLGEFFYAIA 697 (715)
T ss_dssp -------------TSCCCCS----SSCEEETTEEEESSCCTTTTTSCCCCSTTCSSHHHHHHHHHH
T ss_pred -------------hHHhcCC----CcEEEeCCEEECCCCcccccccccccccCHHHHHHHHHHHHH
Confidence 2333322 6799999999999986 56778888888774
No 31
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=99.53 E-value=2e-14 Score=116.67 Aligned_cols=75 Identities=9% Similarity=0.054 Sum_probs=69.6
Q ss_pred CCeeeecCCCEEeccccccCCCCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhcccc
Q 045076 2 QLRVDACHGVKIVADALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSWGLL 79 (145)
Q Consensus 2 ~~~v~~~~G~~i~~d~~~~~~~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~agll 79 (145)
+++|++++|+.|.+|.++++++..+||+|||||| +...+..++.+++||+++++++|+|++||+|++ +|+++|+-
T Consensus 637 ~g~V~gs~G~~V~aD~t~~~v~s~~fDALVVPGG--g~~~Lr~d~~vl~~Vre~~~~gKpIAAIC~Gp~-lLa~AGL~ 711 (753)
T 3ttv_A 637 MGEVTADDGTVLPIAATFAGAPSLTVDAVIVPCG--NIADIADNGDANYYLMEAYKHLKPIALAGDARK-FKATIKIA 711 (753)
T ss_dssp SSEEECTTSCEEECCEETTTSCGGGCSEEEECCS--CGGGTTTCHHHHHHHHHHHHTTCCEEEEGGGGG-GGGGGTCC
T ss_pred CCeEEeCCCCEEecccchhhCCCcCCCEEEECCC--ChHHhhhCHHHHHHHHHHHhcCCeEEEECchHH-HHHHcCCC
Confidence 5689999999999999999998888999999999 677889999999999999999999999999875 89999983
No 32
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=99.28 E-value=6.9e-12 Score=101.52 Aligned_cols=66 Identities=18% Similarity=0.115 Sum_probs=59.2
Q ss_pred eccccccCCCCCCccEEEEcCCccC----------------hhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhcc
Q 045076 14 VADALVSDCRDAVFDLIALPVCMPD----------------ATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSWG 77 (145)
Q Consensus 14 ~~d~~~~~~~~~~~D~liipGG~~~----------------~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~ag 77 (145)
.+|.++++++..+||+||||||..+ +..|..++.+++||+++++.+|+|++||+|++ +|..+|
T Consensus 571 ~vD~t~~~~~s~~fDAVvlPGG~~g~~~~~~~~~~~~~~~~~~~L~~~~~~~~~v~~~~~~gKpIaAIc~ap~-vL~~aG 649 (688)
T 2iuf_A 571 NVDETYSASDAVQFDAVVVADGAEGLFGADSFTVEPSAGSGASTLYPAGRPLNILLDAFRFGKTVGALGSGSD-ALESGQ 649 (688)
T ss_dssp TCCEESTTCCGGGCSEEEECTTCGGGCCTTTTTCCCCTTSCCCSSSCTTHHHHHHHHHHHHTCEEEEEGGGHH-HHHHTT
T ss_pred ccccchhcCCccccCeEEecCCCcccccccccccccccccchhhcccChHHHHHHHHHHHcCCEEEEECchHH-HHHHcC
Confidence 6888999988889999999999656 66788999999999999999999999999887 799999
Q ss_pred ccC
Q 045076 78 LLK 80 (145)
Q Consensus 78 ll~ 80 (145)
+..
T Consensus 650 i~~ 652 (688)
T 2iuf_A 650 ISS 652 (688)
T ss_dssp CCT
T ss_pred CCC
Confidence 853
No 33
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=99.10 E-value=1.1e-10 Score=94.46 Aligned_cols=65 Identities=22% Similarity=0.189 Sum_probs=57.6
Q ss_pred ccccccCCCCCCccEEEEcCCccC-------hhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhccccC
Q 045076 15 ADALVSDCRDAVFDLIALPVCMPD-------ATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSWGLLK 80 (145)
Q Consensus 15 ~d~~~~~~~~~~~D~liipGG~~~-------~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~agll~ 80 (145)
+|.++++++..+||+|+||||..+ +..++.++.+++|++++++++|+|++||+|++ +|.++|+-.
T Consensus 579 vD~t~~~~~s~~fDAVvlPGG~~~~~~~~~~~d~Lr~~~~a~~fV~e~~~hgKpIAAIchgp~-lL~~AGI~~ 650 (688)
T 3ej6_A 579 VDQTYSAADATAFDAVVVAEGAERVFSGKGAMSPLFPAGRPSQILTDGYRWGKPVAAVGSAKK-ALQSIGVEE 650 (688)
T ss_dssp CCEETTTCCGGGCSEEEECTTCCTTTSTTTTCCTTSCTTHHHHHHHHHHHTTCCEEEEGGGHH-HHHHTTCCS
T ss_pred cccCcccCChhcCcEEEECCCcccccccccchhhhccCHHHHHHHHHHHHcCCEEEEeCccHH-HHHHcCCCC
Confidence 788999998889999999999654 26688899999999999999999999999876 799999843
No 34
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=98.67 E-value=1.1e-08 Score=71.92 Aligned_cols=58 Identities=26% Similarity=0.361 Sum_probs=46.3
Q ss_pred CCCccEEEEcCCccChhc-----cccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhccccCCc
Q 045076 24 DAVFDLIALPVCMPDATN-----LKESKVLETIVKKQASNGRLYAAVCASPAVALGSWGLLKGL 82 (145)
Q Consensus 24 ~~~~D~liipGG~~~~~~-----~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~agll~g~ 82 (145)
..++|.||||||...... +.+++.+.++|+++.+++++|.+||.|. .+|+.+|+|.|+
T Consensus 39 ~~~~d~lil~Gg~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pilgIC~G~-qlLa~aGll~g~ 101 (213)
T 3d54_D 39 LDDYELIILPGGFSYGDYLRPGAVAAREKIAFEIAKAAERGKLIMGICNGF-QILIEMGLLKGA 101 (213)
T ss_dssp CSSCSEEEECEECGGGGCSSTTHHHHTSTTHHHHHHHHHHTCEEEECHHHH-HHHHHHTSSCSE
T ss_pred cccCCEEEECCCCchhhhhccccccccHHHHHHHHHHHHCCCEEEEECHHH-HHHHHcCCCCCC
Confidence 458999999999532222 2245778999999999999999999975 589999999984
No 35
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=98.09 E-value=2.1e-06 Score=60.81 Aligned_cols=51 Identities=22% Similarity=0.200 Sum_probs=38.8
Q ss_pred CCccEEEEcCCccChh-ccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhc
Q 045076 25 AVFDLIALPVCMPDAT-NLKESKVLETIVKKQASNGRLYAAVCASPAVALGSW 76 (145)
Q Consensus 25 ~~~D~liipGG~~~~~-~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~a 76 (145)
+++|.||||||..... .+.++..+.++|+++.+++++|.+||.|.+ +|+.+
T Consensus 59 ~~~Dglil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~PilGIC~G~Q-lL~~~ 110 (219)
T 1q7r_A 59 EGLDGLVLPGGESTTMRRLIDRYGLMEPLKQFAAAGKPMFGTCAGLI-LLAKR 110 (219)
T ss_dssp TTCSEEEECCCCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETTHHH-HHEEE
T ss_pred hhCCEEEECCCChHHHHHHhhhhHHHHHHHHHHHcCCeEEEECHHHH-HHHHH
Confidence 3799999999953221 223345567999999999999999999877 67764
No 36
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=98.07 E-value=2e-06 Score=59.75 Aligned_cols=51 Identities=18% Similarity=0.185 Sum_probs=38.5
Q ss_pred CCccEEEEcCCccChh-ccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhc
Q 045076 25 AVFDLIALPVCMPDAT-NLKESKVLETIVKKQASNGRLYAAVCASPAVALGSW 76 (145)
Q Consensus 25 ~~~D~liipGG~~~~~-~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~a 76 (145)
+++|.|++|||..... .+.++..+.++|+++.++++++.+||.|.. +|+.+
T Consensus 37 ~~~d~iil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~pilgIC~G~q-~l~~~ 88 (196)
T 2nv0_A 37 NEVDGLILPGGESTTMRRLIDTYQFMEPLREFAAQGKPMFGTCAGLI-ILAKE 88 (196)
T ss_dssp GGCSEEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETHHHH-HHSBC
T ss_pred hhCCEEEECCCChhhHHHHhhhHHHHHHHHHHHHCCCcEEEECHHHH-HHHHH
Confidence 3799999999953222 222345568899999999999999999876 67764
No 37
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=97.97 E-value=3.6e-06 Score=59.09 Aligned_cols=51 Identities=18% Similarity=0.205 Sum_probs=37.9
Q ss_pred CCccEEEEcCCccChh-ccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhc
Q 045076 25 AVFDLIALPVCMPDAT-NLKESKVLETIVKKQASNGRLYAAVCASPAVALGSW 76 (145)
Q Consensus 25 ~~~D~liipGG~~~~~-~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~a 76 (145)
.++|.||+|||.+... .+..+..+.++|+++.+++++|.+||.|.+ +|+.+
T Consensus 56 ~~~d~iil~GG~~~~~~~~~~~~~~~~~i~~~~~~g~PilGIC~G~Q-lL~~~ 107 (208)
T 2iss_D 56 DMVDGLILPGGESTTMIRILKEMDMDEKLVERINNGLPVFATCAGVI-LLAKR 107 (208)
T ss_dssp GGCSEEEECSSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETHHHH-HHEEE
T ss_pred hhCCEEEECCCcHHHHHhhhhhhhHHHHHHHHHHCCCeEEEECHHHH-HHHHH
Confidence 3799999999953221 122234467899999999999999999876 67764
No 38
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=97.83 E-value=3.2e-05 Score=55.26 Aligned_cols=51 Identities=18% Similarity=0.307 Sum_probs=38.4
Q ss_pred CCccEEEEcCCccChhccccC------hHHHHHHHHHHHCCCeEEEEcchhHHHhhhc
Q 045076 25 AVFDLIALPVCMPDATNLKES------KVLETIVKKQASNGRLYAAVCASPAVALGSW 76 (145)
Q Consensus 25 ~~~D~liipGG~~~~~~~~~~------~~l~~~l~~~~~~~~~v~aic~g~~~~La~a 76 (145)
++||+|||+||..++.....+ ....++|+++.+++++|.+||-|.+ +|+.+
T Consensus 44 ~~~d~lii~GGp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~PvLGIClG~Q-lL~~~ 100 (236)
T 3l7n_A 44 DDFDMLILMGGPQSPSSTKKEFPYYDAQAEVKLIQKAAKSEKIIVGVCLGAQ-LMGVA 100 (236)
T ss_dssp GGCSEEEECCCSSCTTCCTTTCTTCCHHHHHHHHHHHHHTTCEEEEETHHHH-HHHHH
T ss_pred cccCEEEECCCCCCcccccccCcccchHHHHHHHHHHHHcCCCEEEEchHHH-HHHHH
Confidence 479999999995443221111 3478999999999999999999877 57764
No 39
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.83 E-value=1.2e-05 Score=55.46 Aligned_cols=51 Identities=18% Similarity=0.184 Sum_probs=38.4
Q ss_pred CCccEEEEcCCccC-hhccccChHHHHHHHHHHHCC-CeEEEEcchhHHHhhhc
Q 045076 25 AVFDLIALPVCMPD-ATNLKESKVLETIVKKQASNG-RLYAAVCASPAVALGSW 76 (145)
Q Consensus 25 ~~~D~liipGG~~~-~~~~~~~~~l~~~l~~~~~~~-~~v~aic~g~~~~La~a 76 (145)
+++|.|++|||.+. ...+..+..+.++|+++.+++ ++|.+||.|.. +|+.+
T Consensus 38 ~~~dglil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~~PilGiC~G~Q-~l~~~ 90 (191)
T 2ywd_A 38 EGLKALIVPGGESTTIGKLAREYGIEDEVRKRVEEGSLALFGTCAGAI-WLAKE 90 (191)
T ss_dssp TTCSEEEECSSCHHHHHHHHHHTTHHHHHHHHHHTTCCEEEEETHHHH-HHEEE
T ss_pred ccCCEEEECCCChhhhHHhhhhhhHHHHHHHHHHCCCCeEEEECHHHH-HHHHH
Confidence 37999999999422 222332456789999999999 99999999866 67764
No 40
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G
Probab=97.74 E-value=1.6e-05 Score=56.37 Aligned_cols=50 Identities=12% Similarity=0.030 Sum_probs=38.1
Q ss_pred CccEEEEcCCccCh-hccccC--hHHHHHHHHHHHC-CCeEEEEcchhHHHhhhc
Q 045076 26 VFDLIALPVCMPDA-TNLKES--KVLETIVKKQASN-GRLYAAVCASPAVALGSW 76 (145)
Q Consensus 26 ~~D~liipGG~~~~-~~~~~~--~~l~~~l~~~~~~-~~~v~aic~g~~~~La~a 76 (145)
++|.||+|||.... ..+..+ ..+.++|+++.++ +++|.+||.|.. +|+.+
T Consensus 43 ~~dglil~GG~~~~~~~~~~~d~~~~~~~i~~~~~~~g~PilGIC~G~Q-lL~~~ 96 (227)
T 2abw_A 43 LCDGLVIPGGESTTVRRCCAYENDTLYNALVHFIHVLKKPIWGTCAGCI-LLSKN 96 (227)
T ss_dssp TCSEEEECCSCHHHHHHHTTHHHHHHHHHHHHHHHTSCCCEEEETHHHH-HTEEE
T ss_pred cCCEEEECCCcHHHHHHHHHHhHHHHHHHHHHHHHhcCCEEEEECHHHH-HHHHH
Confidence 69999999995222 122222 5678999999999 999999999866 68765
No 41
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=97.72 E-value=1.6e-05 Score=54.74 Aligned_cols=46 Identities=9% Similarity=0.047 Sum_probs=36.2
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhc
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSW 76 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~a 76 (145)
+||.|++|||. .+.. ...+.++++++.++++++.+||.|.+ +|+.+
T Consensus 43 ~~dglil~Gg~-~~~~---~~~~~~~i~~~~~~~~PilGIC~G~Q-~l~~~ 88 (189)
T 1wl8_A 43 NPKGIIFSGGP-SLEN---TGNCEKVLEHYDEFNVPILGICLGHQ-LIAKF 88 (189)
T ss_dssp CCSEEEECCCS-CTTC---CTTHHHHHHTGGGTCSCEEEETHHHH-HHHHH
T ss_pred CCCEEEECCCC-Chhh---hhhHHHHHHHHhhCCCeEEEEcHHHH-HHHHH
Confidence 59999999994 4432 45568889877788999999999877 57764
No 42
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=97.69 E-value=4.1e-05 Score=53.20 Aligned_cols=50 Identities=16% Similarity=0.200 Sum_probs=37.7
Q ss_pred CCccEEEEcCCccChhc-c--ccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhc
Q 045076 25 AVFDLIALPVCMPDATN-L--KESKVLETIVKKQASNGRLYAAVCASPAVALGSW 76 (145)
Q Consensus 25 ~~~D~liipGG~~~~~~-~--~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~a 76 (145)
+++|.|++||+ +.+.. + .++..+.++|+++.+++++|.+||.|.+ +|+.+
T Consensus 39 ~~~d~lil~G~-g~~~~~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Q-ll~~~ 91 (200)
T 1ka9_H 39 EEADLLVLPGQ-GHFGQVMRAFQESGFVERVRRHLERGLPFLGICVGMQ-VLYEG 91 (200)
T ss_dssp SSCSEEEECCC-SCHHHHHHTTSSSCTHHHHHHHHHTTCCEEECTHHHH-TTSSE
T ss_pred ccCCEEEECCC-CcHHHHHHHHHhcCHHHHHHHHHHcCCeEEEEcHHHH-HHHHh
Confidence 47999999995 23221 1 1224578999999999999999999876 68887
No 43
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=97.61 E-value=8.1e-05 Score=53.77 Aligned_cols=51 Identities=12% Similarity=0.019 Sum_probs=38.2
Q ss_pred CCccEEEEcCCccChhc-cccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhc
Q 045076 25 AVFDLIALPVCMPDATN-LKESKVLETIVKKQASNGRLYAAVCASPAVALGSW 76 (145)
Q Consensus 25 ~~~D~liipGG~~~~~~-~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~a 76 (145)
.+||.||||||..++.. ...-..+.++|+++.+.+++|.+||-|.. +|+.+
T Consensus 47 ~~~d~lIl~GGp~~~~d~~~~~~~~~~~i~~~~~~~~PvlGIC~G~Q-ll~~~ 98 (250)
T 3m3p_A 47 RDCSGLAMMGGPMSANDDLPWMPTLLALIRDAVAQRVPVIGHCLGGQ-LLAKA 98 (250)
T ss_dssp GGSSEEEECCCSSCTTSCCTTHHHHHHHHHHHHHHTCCEEEETHHHH-HHHHH
T ss_pred ccCCEEEECCCCCcccccchHHHHHHHHHHHHHHcCCCEEEECHHHH-HHHHH
Confidence 47999999999533322 12224678899998889999999999877 57764
No 44
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=97.59 E-value=0.00012 Score=52.47 Aligned_cols=51 Identities=12% Similarity=0.130 Sum_probs=37.7
Q ss_pred CCccEEEEcCCccChhccccC---hHHHHHHHHHHHCCCeEEEEcchhHHHhhhc
Q 045076 25 AVFDLIALPVCMPDATNLKES---KVLETIVKKQASNGRLYAAVCASPAVALGSW 76 (145)
Q Consensus 25 ~~~D~liipGG~~~~~~~~~~---~~l~~~l~~~~~~~~~v~aic~g~~~~La~a 76 (145)
.++|.||+|||..+....... ..+.++|+++.+++++|.+||-|.. +|+.+
T Consensus 56 ~~~Dglil~GG~~~~~~~~~~~~l~~~~~~i~~~~~~~~PiLGIC~G~Q-lL~~a 109 (239)
T 1o1y_A 56 EEYSLVVLLGGYMGAYEEEKYPFLKYEFQLIEEILKKEIPFLGICLGSQ-MLAKV 109 (239)
T ss_dssp GGCSEEEECCCSCCTTCTTTCTHHHHHHHHHHHHHHHTCCEEEETHHHH-HHHHH
T ss_pred hcCCEEEECCCCccccCCccChhHHHHHHHHHHHHHCCCCEEEEchhHH-HHHHH
Confidence 479999999995333221111 3578899998888999999999877 57764
No 45
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=97.43 E-value=2.5e-05 Score=54.69 Aligned_cols=49 Identities=14% Similarity=0.186 Sum_probs=33.8
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhc
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSW 76 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~a 76 (145)
++|.||+||+ +++...........+++...+.+++|.+||.|-. +|+.+
T Consensus 40 ~~D~lilPG~-g~~~~~~~~~~~~~~i~~~~~~~~PvlGIClG~Q-lL~~~ 88 (211)
T 4gud_A 40 AADKLFLPGV-GTASEAMKNLTERDLIELVKRVEKPLLGICLGMQ-LLGKL 88 (211)
T ss_dssp HCSEEEECCC-SCHHHHHHHHHHTTCHHHHHHCCSCEEEETHHHH-TTSSE
T ss_pred CCCEEEECCC-CCHHHHHHHHHhcChHHHHHHcCCCEEEEchhHh-HHHHH
Confidence 7899999996 3443322222333456777788999999999876 57654
No 46
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=97.41 E-value=0.00013 Score=50.51 Aligned_cols=49 Identities=14% Similarity=0.088 Sum_probs=34.3
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhc
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSW 76 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~a 76 (145)
+||.||++||...+....+.+...++++++ ++++++.+||.|.+ +|+.+
T Consensus 45 ~~dglil~gG~~~~~~~~~~~~~~~~i~~~-~~~~PvLGIC~G~Q-lL~~~ 93 (195)
T 1qdl_B 45 DPDRLIISPGPGTPEKREDIGVSLDVIKYL-GKRTPILGVCLGHQ-AIGYA 93 (195)
T ss_dssp CCSEEEECCCSSCTTSHHHHTTHHHHHHHH-TTTSCEEEETHHHH-HHHHH
T ss_pred CCCEEEECCCCCChhhhhhhhHHHHHHHHh-cCCCcEEEEehHHH-HHHHH
Confidence 599999988843333221123456888875 78999999999877 57764
No 47
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=97.40 E-value=0.00022 Score=61.94 Aligned_cols=58 Identities=10% Similarity=0.059 Sum_probs=45.1
Q ss_pred CCCccEEEEcCCccChh----------ccccChHHHHHHHHHH-HCCCeEEEEcchhHHHhhhc-cccCCc
Q 045076 24 DAVFDLIALPVCMPDAT----------NLKESKVLETIVKKQA-SNGRLYAAVCASPAVALGSW-GLLKGL 82 (145)
Q Consensus 24 ~~~~D~liipGG~~~~~----------~~~~~~~l~~~l~~~~-~~~~~v~aic~g~~~~La~a-gll~g~ 82 (145)
.++||.|++|||....+ ....++.+.+.++++. ++++++.+||+|.+ +|.++ |||.|.
T Consensus 1090 l~~~d~lvlPGGfSygD~l~~g~~~a~~~l~~~~l~~~l~~~~~~~g~pvLGICnG~Q-lL~e~~gllPg~ 1159 (1303)
T 3ugj_A 1090 LGNFHALVACGGFSYGDVLGAGEGWAKSILFNHRVRDEFETFFHRPQTLALGVCNGCQ-MMSNLRELIPGS 1159 (1303)
T ss_dssp GGGCSEEEECCSCGGGGTTSTTHHHHHHHHTSHHHHHHHHHHHHSSSCEEEEETHHHH-HHHTTGGGSTTC
T ss_pred HhhCCEEEECCCCcchhhhccchhHHHHHHhchhHHHHHHHHHHhCCCcEEEECHHHH-HHHHhcCcCCCC
Confidence 35899999999953222 1245677888888865 68999999999988 68888 999986
No 48
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=97.40 E-value=0.00019 Score=49.79 Aligned_cols=50 Identities=20% Similarity=0.314 Sum_probs=36.2
Q ss_pred CCccEEEEcCCccChhc-cc--cChHHHHHHHHHHHCCCeEEEEcchhHHHhhhc
Q 045076 25 AVFDLIALPVCMPDATN-LK--ESKVLETIVKKQASNGRLYAAVCASPAVALGSW 76 (145)
Q Consensus 25 ~~~D~liipGG~~~~~~-~~--~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~a 76 (145)
.++|.||+||+ ..... .. .+..+.++|+++.+++++|.+||.|.. +|+.+
T Consensus 41 ~~~dglilpG~-g~~~~~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Q-ll~~~ 93 (201)
T 1gpw_B 41 DLYDLLFIPGV-GHFGEGMRRLRENDLIDFVRKHVEDERYVVGVCLGMQ-LLFEE 93 (201)
T ss_dssp SCCSEEEECCC-SCSHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHH-TTSSE
T ss_pred cCCCEEEECCC-CcHHHHHHHHHhhCHHHHHHHHHHcCCeEEEEChhHH-HHHHh
Confidence 48999999996 23221 11 112367899999899999999999866 68776
No 49
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=97.36 E-value=0.0002 Score=54.70 Aligned_cols=48 Identities=17% Similarity=0.011 Sum_probs=38.7
Q ss_pred CCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhc
Q 045076 25 AVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSW 76 (145)
Q Consensus 25 ~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~a 76 (145)
.++|.|||+||...+. +....+++++++.+++++|.+||-|-+ +|+.+
T Consensus 230 ~~~DGliLsGGPgdp~---~~~~~~~~Ir~~~~~~~PILGIClG~Q-LLa~A 277 (379)
T 1a9x_B 230 MNPDGIFLSNGPGDPA---PCDYAITAIQKFLETDIPVFGICLGHQ-LLALA 277 (379)
T ss_dssp TCCSEEEECCCSBCST---TCHHHHHHHHHHTTSCCCEEEETHHHH-HHHHH
T ss_pred cCCCEEEEeCCCCChH---HHHHHHHHHHHHHHcCCCEEEECchHH-HHHHH
Confidence 4699999999953333 356788999999988999999999877 57764
No 50
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=97.28 E-value=0.00033 Score=51.57 Aligned_cols=45 Identities=9% Similarity=-0.095 Sum_probs=36.5
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhh
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGS 75 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~ 75 (145)
++|.||||||. +... .+.+.++++++.+++++|.+||.|.+ +|+.
T Consensus 90 ~~dgiil~GG~-~~~~---~~~~~~~i~~~~~~~~PilGIC~G~Q-~l~~ 134 (289)
T 2v4u_A 90 KADGILVPGGF-GIRG---TLGKLQAISWARTKKIPFLGVXLGMQ-LAVI 134 (289)
T ss_dssp HCSEEEECSCC-SSTT---HHHHHHHHHHHHHTTCCEEEETHHHH-HHHH
T ss_pred hCCEEEecCCC-Cchh---HHHHHHHHHHHHHcCCcEEEECccHH-HHHH
Confidence 68999999995 3322 25788999999999999999999877 5765
No 51
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=97.19 E-value=0.00051 Score=48.20 Aligned_cols=47 Identities=9% Similarity=0.066 Sum_probs=31.6
Q ss_pred CccEEEEcCC-ccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhc
Q 045076 26 VFDLIALPVC-MPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSW 76 (145)
Q Consensus 26 ~~D~liipGG-~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~a 76 (145)
++|.|||||| ..........+.+.+++ .++++++.+||-|.. +|+.+
T Consensus 54 ~~DglIl~GG~p~~~~~~~~~~~l~~~~---~~~~~PiLGIC~G~Q-ll~~~ 101 (212)
T 2a9v_A 54 GLDGLVLSGGAPNIDEELDKLGSVGKYI---DDHNYPILGICVGAQ-FIALH 101 (212)
T ss_dssp TCSEEEEEEECSCGGGTGGGHHHHHHHH---HHCCSCEEEETHHHH-HHHHH
T ss_pred CCCEEEECCCCCCCCcccccchhHHHHH---HhCCCCEEEEChHHH-HHHHH
Confidence 5999999999 43333221223344443 468999999999877 57764
No 52
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=97.04 E-value=0.00065 Score=48.97 Aligned_cols=50 Identities=14% Similarity=0.142 Sum_probs=36.8
Q ss_pred CCccEEEEcCCccC--hhcc-------------ccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhc
Q 045076 25 AVFDLIALPVCMPD--ATNL-------------KESKVLETIVKKQASNGRLYAAVCASPAVALGSW 76 (145)
Q Consensus 25 ~~~D~liipGG~~~--~~~~-------------~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~a 76 (145)
+++|.|+|+||. + +... .++...+++++++.+++++|.+||-|-+ +|+.+
T Consensus 60 ~~~DGlil~GG~-~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~PiLGIC~G~Q-ll~~a 124 (254)
T 3fij_A 60 SLVDGLLLTGGQ-DITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQ-LVNVA 124 (254)
T ss_dssp HTCSEEEECCCS-CCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCEEEETHHHH-HHHHH
T ss_pred hhCCEEEECCCC-CCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCEEEECHHHH-HHHHH
Confidence 379999999993 3 1111 1223478999999999999999999876 57764
No 53
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=97.00 E-value=0.00055 Score=46.80 Aligned_cols=48 Identities=19% Similarity=0.143 Sum_probs=32.0
Q ss_pred CCccEEEEcCCccChhc-cccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhc
Q 045076 25 AVFDLIALPVCMPDATN-LKESKVLETIVKKQASNGRLYAAVCASPAVALGSW 76 (145)
Q Consensus 25 ~~~D~liipGG~~~~~~-~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~a 76 (145)
.++|.|++|||...... +.....+.++++ +++++|.+||.|.+ +|+.+
T Consensus 36 ~~~dglil~GG~~~~~~~~~~~~~~~~~i~---~~~~PilGIC~G~Q-ll~~~ 84 (186)
T 2ywj_A 36 EGIDALIIPGGESTAIGKLMKKYGLLEKIK---NSNLPILGTCAGMV-LLSKG 84 (186)
T ss_dssp TTCSEEEECCSCHHHHHHHHHHTTHHHHHH---TCCCCEEEETHHHH-HHSSC
T ss_pred ccCCEEEECCCCchhhhhhhhccCHHHHHH---hcCCcEEEECHHHH-HHHHH
Confidence 47999999999432211 111223455555 77899999999876 67765
No 54
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=96.87 E-value=0.0015 Score=52.25 Aligned_cols=59 Identities=12% Similarity=0.053 Sum_probs=37.5
Q ss_pred cccccCCCCCCccEEEEcCCccChhccccChHH-HHHHHHHHHCCCeEEEEcchhHHHhhhc
Q 045076 16 DALVSDCRDAVFDLIALPVCMPDATNLKESKVL-ETIVKKQASNGRLYAAVCASPAVALGSW 76 (145)
Q Consensus 16 d~~~~~~~~~~~D~liipGG~~~~~~~~~~~~l-~~~l~~~~~~~~~v~aic~g~~~~La~a 76 (145)
+..++++...++|.||+|||..+... ...+.+ ..+++.+.+++++|.+||.|-+ +|+.+
T Consensus 40 ~~~~~~i~~~~~dgIIlsGGp~s~~~-~~~~~~~~~l~~~a~~~g~PvLGIC~G~Q-lLa~~ 99 (556)
T 3uow_A 40 GVELKDIKDMNIKGVILSGGPYSVTE-AGSPHLKKEVFEYFLEKKIPIFGICYGMQ-EIAVQ 99 (556)
T ss_dssp TCCGGGTTTSCEEEEEECCCSCCTTS-TTCCCCCHHHHHHHHHTTCCEEEETHHHH-HHHHH
T ss_pred CCCHHHHhhcCCCEEEECCCCCcccc-cCCcchhHHHHHHhhhcCCCEEEECHHHH-HHHHH
Confidence 33455554447899999999543322 112222 2344556677999999999877 57764
No 55
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=96.83 E-value=0.0006 Score=47.80 Aligned_cols=47 Identities=15% Similarity=0.136 Sum_probs=36.4
Q ss_pred CccEEEEcCCccChhc---cccChHHHHHHHHHHHCCCeEEEEcchhHHHhhh
Q 045076 26 VFDLIALPVCMPDATN---LKESKVLETIVKKQASNGRLYAAVCASPAVALGS 75 (145)
Q Consensus 26 ~~D~liipGG~~~~~~---~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~ 75 (145)
+.|.|++|||. ... ..+...+.+.|+++.++|+++.++|.|. .+|+.
T Consensus 79 ~ad~I~l~GG~--~~~l~~~L~~~gl~~~l~~~~~~G~p~~G~sAGa-~~l~~ 128 (206)
T 3l4e_A 79 KNDFIYVTGGN--TFFLLQELKRTGADKLILEEIAAGKLYIGESAGA-VITSP 128 (206)
T ss_dssp HSSEEEECCSC--HHHHHHHHHHHTHHHHHHHHHHTTCEEEEETHHH-HTTSS
T ss_pred hCCEEEECCCC--HHHHHHHHHHCChHHHHHHHHHcCCeEEEECHHH-HHhcc
Confidence 68999999984 322 2345678889999999999999999974 45654
No 56
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=96.79 E-value=0.00051 Score=48.84 Aligned_cols=50 Identities=12% Similarity=0.002 Sum_probs=36.4
Q ss_pred CccEEEEcCCccC-hhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhc
Q 045076 26 VFDLIALPVCMPD-ATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSW 76 (145)
Q Consensus 26 ~~D~liipGG~~~-~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~a 76 (145)
+.|.||+|||... .......-.+.+.|+++.++|+++.++|.|. .+|+..
T Consensus 79 ~ad~I~lpGG~~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~sAG~-~~l~~~ 129 (229)
T 1fy2_A 79 KAEIIIVGGGNTFQLLKESRERGLLAPMADRVKRGALYIGWSAGA-NLACPT 129 (229)
T ss_dssp HCSEEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHH-HHTSSB
T ss_pred cCCEEEECCCcHHHHHHHHHHCChHHHHHHHHHcCCEEEEECHHH-Hhhccc
Confidence 6899999998421 1122344567888898889999999999974 467653
No 57
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=96.65 E-value=0.002 Score=46.98 Aligned_cols=45 Identities=13% Similarity=-0.071 Sum_probs=35.1
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhh
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGS 75 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~ 75 (145)
++|.||+|||. +.. ..+...++++.+.+++++|.+||-|-+ +|+.
T Consensus 67 ~~dgiil~GG~-~~~---~~~~~~~~i~~~~~~~~PilGIC~G~Q-ll~~ 111 (273)
T 2w7t_A 67 GCDGIFVPGGF-GNR---GVDGKCAAAQVARMNNIPYFGVXLGMQ-VAVI 111 (273)
T ss_dssp TCSEEEECCCC-TTT---THHHHHHHHHHHHHHTCCEEEETHHHH-HHHH
T ss_pred hCCEEEecCCC-CCc---CchhHHHHHHHHHHCCCcEEEECcCHH-HHHH
Confidence 78999999995 332 223577888888888999999999877 4654
No 58
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=96.60 E-value=0.0031 Score=46.92 Aligned_cols=57 Identities=16% Similarity=0.088 Sum_probs=40.2
Q ss_pred ccCCCCCCccEEEEcCCccChhcc---ccChHHHHHHHHHHHCCCeEEEEcchhHHHhhh
Q 045076 19 VSDCRDAVFDLIALPVCMPDATNL---KESKVLETIVKKQASNGRLYAAVCASPAVALGS 75 (145)
Q Consensus 19 ~~~~~~~~~D~liipGG~~~~~~~---~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~ 75 (145)
+++++.++||.+||.|+....... ..=+++.++++...++++++.+||-|..+++..
T Consensus 104 f~~~~~~~~DglIITGsP~~~~~~ed~~yw~el~~li~~~~~~~~p~LGIC~GaQ~~l~~ 163 (312)
T 2h2w_A 104 FSAVKDRKFDGFIITGAPVELLPFEEVDYWEELTEIMEWSRHNVYSTMFICWAAQAGLYY 163 (312)
T ss_dssp GGGTTTCCEEEEEECCCSCTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHH
T ss_pred cccccccCcCEEEECCCCCCCCCCccCchHHHHHHHHHHHHHcCCcEEEECHHHHHHHHH
Confidence 555555689999999994222111 112578888888888999999999987753554
No 59
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=96.34 E-value=0.0028 Score=46.94 Aligned_cols=57 Identities=14% Similarity=0.151 Sum_probs=39.2
Q ss_pred ccCCCCCCccEEEEcCCccChhcc---ccChHHHHHHHHHHHCCCeEEEEcchhHHHhhh
Q 045076 19 VSDCRDAVFDLIALPVCMPDATNL---KESKVLETIVKKQASNGRLYAAVCASPAVALGS 75 (145)
Q Consensus 19 ~~~~~~~~~D~liipGG~~~~~~~---~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~ 75 (145)
+++++.++||.+||.|+..+.... ..=+++.++++...++++++.+||-|..+++..
T Consensus 92 f~~~~~~~~DglIITGap~~~~~~ed~~yw~el~~li~~~~~~~~~~lgIC~GaQ~~l~~ 151 (301)
T 2vdj_A 92 FRDIENEKFDGLIITGAPVETLSFEEVDYWEELKRIMEYSKTNVTSTLHICWGAQAGLYH 151 (301)
T ss_dssp HHHHTTSCEEEEEECCCTTTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHH
T ss_pred cccccccccCEEEECCCCCcCCCcccCchHHHHHHHHHHHHHcCCcEEEEcHHHHHHHHH
Confidence 334344689999999994222111 112578888888888999999999987753554
No 60
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.28 E-value=0.0027 Score=50.75 Aligned_cols=50 Identities=12% Similarity=0.089 Sum_probs=36.6
Q ss_pred CCccEEEEcCCccChhcc---ccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhc
Q 045076 25 AVFDLIALPVCMPDATNL---KESKVLETIVKKQASNGRLYAAVCASPAVALGSW 76 (145)
Q Consensus 25 ~~~D~liipGG~~~~~~~---~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~a 76 (145)
+++|.||+||| +.+... ..+..+.++|+++.+++++|.+||.|.+ +|+.+
T Consensus 43 ~~~DglILpGg-G~~~~~~~~l~~~~~~~~i~~~~~~g~PiLGIC~G~Q-lL~~a 95 (555)
T 1jvn_A 43 SGTSRLILPGV-GNYGHFVDNLFNRGFEKPIREYIESGKPIMGIXVGLQ-ALFAG 95 (555)
T ss_dssp TTCSCEEEEEC-SCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEEEHHHH-TTEEE
T ss_pred ccCCEEEECCC-CchHhHhhhhhhccHHHHHHHHHHcCCcEEEEchhhh-hhhhh
Confidence 47999999995 232211 1123467889999899999999999876 68775
No 61
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=96.26 E-value=0.0058 Score=49.73 Aligned_cols=50 Identities=20% Similarity=0.327 Sum_probs=37.0
Q ss_pred CCccEEEEcCCccChhccccC---hHHHHHHHHHHHCCCeEEEEcchhHHHhhhc
Q 045076 25 AVFDLIALPVCMPDATNLKES---KVLETIVKKQASNGRLYAAVCASPAVALGSW 76 (145)
Q Consensus 25 ~~~D~liipGG~~~~~~~~~~---~~l~~~l~~~~~~~~~v~aic~g~~~~La~a 76 (145)
.++|.|||+||..++... .. +.+.++|+++.+.+++|.+||-|-+ +|+.+
T Consensus 485 ~~~DgIIlsGGPg~p~d~-~~p~i~~~~~lI~~a~~~~iPiLGIClG~Q-lLa~a 537 (645)
T 3r75_A 485 ARYDVVVMGPGPGDPSDA-GDPRIARLYAWLRHLIDEGKPFMAVCLSHQ-ILNAI 537 (645)
T ss_dssp GGCSEEEECCCSSCTTCT-TSHHHHHHHHHHHHHHHHTCCEEEETHHHH-HHHHH
T ss_pred cCCCEEEECCCCCChhhh-hhhhHHHHHHHHHHHHHCCCCEEEECHHHH-HHHHH
Confidence 479999999995444331 22 2467788888888999999999877 56654
No 62
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=96.20 E-value=0.0066 Score=48.13 Aligned_cols=47 Identities=6% Similarity=-0.072 Sum_probs=37.0
Q ss_pred CCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhh
Q 045076 24 DAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGS 75 (145)
Q Consensus 24 ~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~ 75 (145)
..++|.|++|||.+ .. ..+...++++.+.++++++.+||-|-+ +|+.
T Consensus 348 L~~~DgIIlpGG~G-~~---~~~g~i~~ir~a~~~~~PiLGIClG~Q-ll~v 394 (535)
T 3nva_A 348 LGNVNGIIVLPGFG-SR---GAEGKIKAIKYAREHNIPFLGICFGFQ-LSIV 394 (535)
T ss_dssp TTSCSEEEECCCCS-ST---THHHHHHHHHHHHHHTCCEEEETHHHH-HHHH
T ss_pred ccCCCEEEECCCCC-Cc---cHHHHHHHHHHHHHcCCcEEEECcchh-HHHH
Confidence 35899999999963 32 235678899999999999999999876 4554
No 63
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=96.11 E-value=0.0048 Score=45.87 Aligned_cols=49 Identities=14% Similarity=0.117 Sum_probs=32.9
Q ss_pred CccEEEEcCCccChhccc---cChHHHHHHHHHHHCC--CeEEEEcchhHHHhhh
Q 045076 26 VFDLIALPVCMPDATNLK---ESKVLETIVKKQASNG--RLYAAVCASPAVALGS 75 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~---~~~~l~~~l~~~~~~~--~~v~aic~g~~~~La~ 75 (145)
++|.||||||..+..... ....+.++++++.+++ ++|.+||-|-+ +|+.
T Consensus 86 ~~dglil~GG~~~v~p~~~~~~~~~l~~~~~~~~~~g~~~PiLGIC~G~Q-ll~~ 139 (315)
T 1l9x_A 86 SINGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFE-ELSL 139 (315)
T ss_dssp HSSEEEECCCCCCTTTCHHHHHHHHHHHHHHHHHHTTCCCCEEEETHHHH-HHHH
T ss_pred cCCEEEEeCCCcccChhhhhHHHHHHHHHHHHHHhcCCCceEEEEChHHH-HHHH
Confidence 689999999942322110 1135667777766554 99999999877 5664
No 64
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=96.02 E-value=0.011 Score=47.08 Aligned_cols=46 Identities=15% Similarity=0.104 Sum_probs=36.1
Q ss_pred CCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhh
Q 045076 25 AVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGS 75 (145)
Q Consensus 25 ~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~ 75 (145)
.++|.||+|||.+.+ . .+...++++.+.++++++.+||-|-+ +|+.
T Consensus 342 ~~~DGIilsGGpg~~-~---~~g~~~~i~~a~~~~~PiLGIClG~Q-ll~v 387 (545)
T 1s1m_A 342 KGLDAILVPGGFGYR-G---VEGMITTARFARENNIPYLGICLGMQ-VALI 387 (545)
T ss_dssp TTCSEEEECCCCSST-T---HHHHHHHHHHHHHTTCCEEEETHHHH-HHHH
T ss_pred hcCCEEEECCCCCCc-c---chhhHHHHHHHHHCCCcEEEECChHH-HHHH
Confidence 479999999995432 2 25677888888888999999999877 4664
No 65
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=95.87 E-value=0.00036 Score=49.25 Aligned_cols=47 Identities=9% Similarity=0.052 Sum_probs=27.0
Q ss_pred CCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhc
Q 045076 25 AVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSW 76 (145)
Q Consensus 25 ~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~a 76 (145)
.+||.||||||...... ...+. +.+...+++++|.+||.|.+ +|+.+
T Consensus 66 ~~~dglil~Gg~~~~~~-~~~~~---~~~~~~~~~~PilGIC~G~Q-ll~~~ 112 (218)
T 2vpi_A 66 QGFRAIIISGGPNSVYA-EDAPW---FDPAIFTIGKPVLGICYGMQ-MMNKV 112 (218)
T ss_dssp HTCSEEEEEC----------CCC---CCGGGGTSSCCEEEETHHHH-HHHHH
T ss_pred cCCCEEEECCCCccccc-ccchh---HHHHHHHcCCCEEEEcHHHH-HHHHH
Confidence 36999999999432211 11111 22334567899999999877 57764
No 66
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=95.68 E-value=0.015 Score=46.44 Aligned_cols=46 Identities=9% Similarity=-0.053 Sum_probs=35.5
Q ss_pred CCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhh
Q 045076 25 AVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGS 75 (145)
Q Consensus 25 ~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~ 75 (145)
.++|.||||||++.+ . .+..++.++.+.++++++.+||-|-+ +|+.
T Consensus 354 ~~~DGIILpGGfGd~-~---~~g~i~~ir~a~e~~iPiLGICLGmQ-lL~~ 399 (550)
T 1vco_A 354 RDVSGILVPGGFGVR-G---IEGKVRAAQYARERKIPYLGICLGLQ-IAVI 399 (550)
T ss_dssp TTCSCEEECCCCSST-T---HHHHHHHHHHHHHTTCCEEEETHHHH-HHHH
T ss_pred hcCCEEEECCCCCCc-c---hhhhHHHHHHHHHCCCcEEEECcCHH-HHHH
Confidence 479999999995332 2 24567888888888999999999877 4554
No 67
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=95.17 E-value=0.008 Score=47.76 Aligned_cols=56 Identities=14% Similarity=-0.089 Sum_probs=33.1
Q ss_pred cccccCCCCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhc
Q 045076 16 DALVSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSW 76 (145)
Q Consensus 16 d~~~~~~~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~a 76 (145)
+...+++...++|.||+|||..+.. ++......+...+.+++|.+||.|-+ +|+.+
T Consensus 43 ~~~~~~i~~~~~dgIILsGGp~sv~----~~~~~~~~~~~~~~~~PvLGIC~G~Q-lla~~ 98 (527)
T 3tqi_A 43 DIDEETIRDFNPHGIILSGGPETVT----LSHTLRAPAFIFEIGCPVLGICYGMQ-TMAYQ 98 (527)
T ss_dssp TCCSSSSTTTCCSEEEECCCCC-------------CCCSTTTSSSCEEEETHHHH-HHHHH
T ss_pred CCCHHHHHhcCCCEEEECCcCcccc----cCCChhhHHHHHhcCCCEEEEChHHH-HHHHH
Confidence 3344454433569999999953321 22222334455678999999999877 57754
No 68
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=93.76 E-value=0.07 Score=36.41 Aligned_cols=45 Identities=7% Similarity=0.073 Sum_probs=28.2
Q ss_pred ccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhc
Q 045076 27 FDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSW 76 (145)
Q Consensus 27 ~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~a 76 (145)
+|.+|+.||...+.. .....++++. .+++++|.+||-|-+ +|+.+
T Consensus 48 ~~~iil~gGpg~~~~---~~~~~~l~~~-~~~~~PilGIC~G~Q-ll~~~ 92 (192)
T 1i1q_B 48 NPVLMLSPGPGVPSE---AGCMPELLTR-LRGKLPIIGICLGHQ-AIVEA 92 (192)
T ss_dssp SEEEEECCCSSCGGG---STTHHHHHHH-HBTTBCEEEETHHHH-HHHHH
T ss_pred CCeEEECCCCcCchh---CchHHHHHHH-HhcCCCEEEECcChH-HHHHH
Confidence 344777777434332 2233444443 567899999999877 57764
No 69
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=93.12 E-value=0.059 Score=39.61 Aligned_cols=47 Identities=19% Similarity=0.150 Sum_probs=36.9
Q ss_pred CccEEEEcCCccChhc---cccChHHHHHHHHHHHCC-CeEEEEcchhHHHhhh
Q 045076 26 VFDLIALPVCMPDATN---LKESKVLETIVKKQASNG-RLYAAVCASPAVALGS 75 (145)
Q Consensus 26 ~~D~liipGG~~~~~~---~~~~~~l~~~l~~~~~~~-~~v~aic~g~~~~La~ 75 (145)
+.|+|+|+||. ... ....-.+.+.|++.+++| .++++.|+| +.+++.
T Consensus 110 ~ad~I~v~GGn--t~~l~~~l~~t~l~~~L~~~~~~G~~~~~GtSAG-A~i~~~ 160 (291)
T 3en0_A 110 QCTGIFMTGGD--QLRLCGLLADTPLMDRIRQRVHNGEISLAGTSAG-AAVMGH 160 (291)
T ss_dssp HCSEEEECCSC--HHHHHHHHTTCHHHHHHHHHHHTTSSEEEEETHH-HHTTSS
T ss_pred cCCEEEECCCC--HHHHHHHHHhCCHHHHHHHHHHCCCeEEEEeCHH-HHhhhH
Confidence 68999999994 333 345678889999999999 899999996 546653
No 70
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=92.09 E-value=0.031 Score=44.10 Aligned_cols=46 Identities=11% Similarity=0.001 Sum_probs=29.5
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhc
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSW 76 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~a 76 (145)
++|.||+|||..+... ...+.+ .+...+.+++|.+||-|-+ +|+.+
T Consensus 42 ~~dgiIlsGGp~s~~~-~~~~~~---~~~~~~~~~PvLGIC~G~Q-lla~~ 87 (503)
T 2ywb_A 42 RPQALILSGGPRSVFD-PDAPRP---DPRLFSSGLPLLGICYGMQ-LLAQE 87 (503)
T ss_dssp CCSEEEECCCSSCSSC-TTCCCC---CGGGGCSSCCEEEETHHHH-HHHHT
T ss_pred CCCEEEECCCCchhcc-CCCcch---HHHHHhCCCCEEEECHHHH-HHHHH
Confidence 4699999999533221 111211 1334567999999999877 57764
No 71
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=91.93 E-value=0.05 Score=43.15 Aligned_cols=46 Identities=15% Similarity=-0.013 Sum_probs=29.6
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhc
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSW 76 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~a 76 (145)
++|.||+|||..+... ...+.+ .+...+.+++|.+||-|-+ +|+.+
T Consensus 50 ~~dgiILsGGp~s~~~-~~~~~~---~~~~~~~g~PvLGIC~G~Q-lla~~ 95 (525)
T 1gpm_A 50 NPSGIILSGGPESTTE-ENSPRA---PQYVFEAGVPVFGVCYGMQ-TMAMQ 95 (525)
T ss_dssp CCSEEEECCCSSCTTS-TTCCCC---CGGGGTSSSCEEEETHHHH-HHHHH
T ss_pred CCCEEEECCcCccccc-cCCcch---HHHHHHCCCCEEEEChHHH-HHHHH
Confidence 4599999999533322 111222 2334567999999999877 57754
No 72
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=91.50 E-value=0.016 Score=47.58 Aligned_cols=47 Identities=9% Similarity=0.059 Sum_probs=28.6
Q ss_pred CCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhc
Q 045076 25 AVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSW 76 (145)
Q Consensus 25 ~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~a 76 (145)
.++|.||++||..+... ...+.+ .+...+.+++|.+||.|-+ +|+.+
T Consensus 71 ~~~dGIILsGGp~s~~~-~~~~~~---~~~i~~~g~PvLGIC~G~Q-lLa~~ 117 (697)
T 2vxo_A 71 QGFRAIIISGGPNSVYA-EDAPWF---DPAIFTIGKPVLGICYGMQ-MMNKV 117 (697)
T ss_dssp HTCSEEEEEECC--------CCCC---CGGGTTSSCCEEEEEHHHH-HHHHH
T ss_pred cCCCEEEECCCCCcccC-ccchhH---HHHHHhCCCCEEEECHHHH-HHHHH
Confidence 36899999999532211 111111 1233567899999999877 57764
No 73
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=87.85 E-value=0.24 Score=32.90 Aligned_cols=53 Identities=11% Similarity=0.140 Sum_probs=39.4
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhccccC
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSWGLLK 80 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~agll~ 80 (145)
+.|+|+|-||.+-+..=...+.+.+++.+..+.++-|.++|- -. ++.++|..+
T Consensus 84 ~~D~vVllGGLAMPk~~v~~e~v~~li~ki~~~~~kiiGvCF-ms-~F~kagW~~ 136 (157)
T 2r47_A 84 NVDVLVLLGGLSMPGIGSDIEDVKKLVEDALEEGGELMGLCY-MD-MFARAGWYE 136 (157)
T ss_dssp CEEEEEEEGGGGSTTTSCCHHHHHHHHHHHEEEEEEEEEEEE-TT-HHHHTTHHH
T ss_pred CCCEEEEeccccCCCCCCCHHHHHHHHHHhhcCCCCEEEEEh-HH-HHHHcCCCc
Confidence 789999999975444334557888999988666667999998 34 578887543
No 74
>3klb_A Putative flavoprotein; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: FMN; 1.75A {Bacteroides fragilis nctc 9343}
Probab=76.03 E-value=1.6 Score=28.71 Aligned_cols=43 Identities=9% Similarity=0.199 Sum_probs=29.6
Q ss_pred CCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchh
Q 045076 24 DAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASP 69 (145)
Q Consensus 24 ~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~ 69 (145)
..+||.|++.. +.. .-.-.+.+..||++..-+++.++.+|+.+
T Consensus 76 l~~yd~iilG~--P~~-~g~~~~~~~~fl~~~~l~gk~v~~f~t~g 118 (162)
T 3klb_A 76 PEKYEVLFVGF--PVW-WYIAPTIINTFLESYDFAGKIVVPFATSG 118 (162)
T ss_dssp GGGCSEEEEEE--ECB-TTBCCHHHHHHHHTSCCTTCEEEEEEECS
T ss_pred hhhCCEEEEEc--ccc-cCCCCHHHHHHHHhcCCCCCEEEEEEEeC
Confidence 34899998832 222 22346788899988766788888888743
No 75
>4ici_A Putative flavoprotein; PF12682 family protein, flavodoxin_4, structural genomics, J center for structural genomics, JCSG; HET: MSE FMN EPE; 1.40A {Bacteroides eggerthii}
Probab=75.62 E-value=2 Score=28.59 Aligned_cols=43 Identities=12% Similarity=0.207 Sum_probs=29.8
Q ss_pred CCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchh
Q 045076 24 DAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASP 69 (145)
Q Consensus 24 ~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~ 69 (145)
..+||.|++.. +.. .-.-.+.+..||++..-+++.++.+|+.+
T Consensus 85 l~~yD~iilg~--Pvy-~g~~~~~~~~fl~~~~l~gk~v~~f~t~g 127 (171)
T 4ici_A 85 IGTYDVVFIGY--PIW-WDLAPRIINTFIEGHSLKGKTVVPFATSG 127 (171)
T ss_dssp GGGCSEEEEEE--ECB-TTBCCHHHHHHHHHSCCTTSEEEEEEECS
T ss_pred HhHCCEEEEec--ccc-cCCchHHHHHHHHHcCCCcCEEEEEEecC
Confidence 34899998833 222 22346788999998766788888888743
No 76
>3edo_A Flavoprotein, putative Trp repressor binding protein; YP_193882.1, flavoprotein in complex with FMN, structural genomics; HET: MSE FMN; 1.20A {Lactobacillus acidophilus ncfm}
Probab=67.04 E-value=4.9 Score=25.84 Aligned_cols=40 Identities=15% Similarity=0.145 Sum_probs=24.1
Q ss_pred CCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEc
Q 045076 24 DAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVC 66 (145)
Q Consensus 24 ~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic 66 (145)
..+||.|++.. + ...-.-.+.+..||.+....++.++++|
T Consensus 74 l~~~d~iilG~--P-~~~g~~~~~~~~fl~~~~~~~~k~~~~~ 113 (151)
T 3edo_A 74 YNNYDLILIGS--P-VWSGYPATPIKTLLDQMKNYRGEVASFF 113 (151)
T ss_dssp GGGCSEEEEEE--E-EETTEECTHHHHHHHHTTTCCSEEEEEE
T ss_pred HhhCCEEEEEc--c-eecccccHHHHHHHHhchhcCCEEEEEE
Confidence 34899998833 2 2222346788899988654344444444
No 77
>1wui_S Periplasmic [NIFE] hydrogenase small subunit; high resolution [NIFE]hydrogenase, oxidoreductase, NI-A state, unready state; HET: NFC; 1.04A {Desulfovibrio vulgaris str} SCOP: e.19.1.1 PDB: 1h2r_S 1ubj_S 1ubh_S 1ubl_S 1ubm_S 1ubo_S 1ubr_S 1ubt_S 1ubu_S 1wuh_S* 1ubk_S* 1wuj_S 1wuk_S 1wul_S 1e3d_A*
Probab=65.83 E-value=7 Score=28.18 Aligned_cols=43 Identities=12% Similarity=0.057 Sum_probs=31.0
Q ss_pred CCCccEEEEcCCccChhc----cccChHHHHHHHHHHHCCCeEEEEcc
Q 045076 24 DAVFDLIALPVCMPDATN----LKESKVLETIVKKQASNGRLYAAVCA 67 (145)
Q Consensus 24 ~~~~D~liipGG~~~~~~----~~~~~~l~~~l~~~~~~~~~v~aic~ 67 (145)
+.+ |+++|-|....... .......+++++++.++.++|.|+++
T Consensus 67 p~~-Dil~VeG~V~~~~~g~~~~~~g~~~l~~~~e~~~~ak~VIAvGs 113 (267)
T 1wui_S 67 PHG-FIAVVEGGIPTAANGIYGKVANHTMLDICSRILPKAQAVIAYGT 113 (267)
T ss_dssp TTC-EEEEEESBEECGGGGTTBEETTEEHHHHHHHHGGGSSEEEEESH
T ss_pred CCC-eEEEEeCCCccCCCcceeecCChHHHHHHHHHhccCCEEEEeee
Confidence 346 99999998532111 11234789999999999999999975
No 78
>3i9v_6 NADH-quinone oxidoreductase subunit 6; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_6* 2fug_6* 3iam_6* 3ias_6* 3m9s_6*
Probab=59.70 E-value=7.1 Score=26.50 Aligned_cols=39 Identities=10% Similarity=0.046 Sum_probs=28.4
Q ss_pred CCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcc
Q 045076 24 DAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCA 67 (145)
Q Consensus 24 ~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~ 67 (145)
+.+.|+++|-|... . .....++.+.++.++.++|.|+++
T Consensus 72 PrqaDiliVeG~Vt--~---~m~~~l~~~~e~~p~pk~VIAvGs 110 (181)
T 3i9v_6 72 PRQADVMIVAGRLS--K---KMAPVMRRVWEQMPDPKWVISMGA 110 (181)
T ss_dssp --CCCCEEEESCCB--T---TTHHHHHHHHHSSCSSCCEEEEHH
T ss_pred CCCceEEEEeccCC--c---ccHHHHHHHHHHcCCCceEEEeec
Confidence 45789999999752 1 334666777788888999999976
No 79
>1ffv_A CUTS, iron-sulfur protein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: a.56.1.1 d.15.4.2 PDB: 1ffu_A*
Probab=59.40 E-value=1.7 Score=29.03 Aligned_cols=74 Identities=14% Similarity=0.246 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHCCCeEEEEcchhHHHhhhccccCCceeecCcchhhhhcccCceeccccEEEeCCeEecCCcchHHHHHH
Q 045076 47 VLETIVKKQASNGRLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAV 126 (145)
Q Consensus 47 ~l~~~l~~~~~~~~~v~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~~~~~~~~~~~v~dg~iiT~~g~~~~~~~~l 126 (145)
.+...-+.|.+.+..-++.|+ +.++++...||+..+ .|. .+++++. .+||+.-|.|....++...
T Consensus 85 ~l~pvq~a~~~~~~~QCG~Ct-pG~imsa~all~~~~---~pt-~~ei~~~----------l~gnlCRCtgY~~I~~Av~ 149 (163)
T 1ffv_A 85 VLHAVQEGFYKEHGLQCGFCT-PGMLMRAYRFLQENP---NPT-EAEIRMG----------MTGNLCRCTGYQNIVKAVQ 149 (163)
T ss_dssp BCCHHHHHHHHTTCCSSCSSH-HHHHHHHHHHHHHCS---SCC-HHHHHHH----------TTTCCCSSSCSHHHHHHHH
T ss_pred CcCHHHHHHHHhCCccCcccc-HhHHHHHHHHHHcCC---CCC-HHHHHHH----------HcCCccCCCCCHHHHHHHH
Confidence 344455566677778899999 567899999987543 222 2334332 3689999999988888777
Q ss_pred HHHHHhcCh
Q 045076 127 ALVEQLYRK 135 (145)
Q Consensus 127 ~li~~~~g~ 135 (145)
...+...+.
T Consensus 150 ~~a~~~~~~ 158 (163)
T 1ffv_A 150 YAARKLQEP 158 (163)
T ss_dssp HHHHHHTC-
T ss_pred HHHHHhccc
Confidence 666655443
No 80
>1h2a_S Hydrogenase; SO ligand, hydrogen metabolism, Mg center, MIR, MAD, oxidoreductase; 1.80A {Desulfovibrio vulgaris str} SCOP: e.19.1.1
Probab=57.94 E-value=12 Score=27.66 Aligned_cols=43 Identities=12% Similarity=0.057 Sum_probs=31.3
Q ss_pred CCCccEEEEcCCccChhc----cccChHHHHHHHHHHHCCCeEEEEcc
Q 045076 24 DAVFDLIALPVCMPDATN----LKESKVLETIVKKQASNGRLYAAVCA 67 (145)
Q Consensus 24 ~~~~D~liipGG~~~~~~----~~~~~~l~~~l~~~~~~~~~v~aic~ 67 (145)
+.+ |+++|-|......+ .......+++++++.++.++|.|+++
T Consensus 117 pr~-DIliVeGsV~~~~~g~~~~~~g~~~l~~l~e~~~~ak~VIAvGs 163 (317)
T 1h2a_S 117 PHG-FIAVVEGGIPTAANGIYGKVANHTMLDICSRILPKAQAVIAYGT 163 (317)
T ss_dssp TTC-CEEEEESBEECGGGGTTBEETTEEHHHHHHHHGGGCSEEEEESH
T ss_pred CCC-eEEEEeCCCcCCCCCcceeeCChHHHHHHHHHhccCCEEEEecc
Confidence 346 99999998532210 11236789999999999999999975
No 81
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=56.43 E-value=15 Score=22.47 Aligned_cols=41 Identities=20% Similarity=0.139 Sum_probs=26.5
Q ss_pred CCccEEEEcCCccChhccccChH--HHHHHHHHHH--CCCeEEEEcch
Q 045076 25 AVFDLIALPVCMPDATNLKESKV--LETIVKKQAS--NGRLYAAVCAS 68 (145)
Q Consensus 25 ~~~D~liipGG~~~~~~~~~~~~--l~~~l~~~~~--~~~~v~aic~g 68 (145)
.++|.|++..- .. .-...+. +..|+++... ++++++.+++.
T Consensus 45 ~~~d~vi~g~p--~y-~~~~~~~~~~~~fl~~l~~~l~~k~~~~~~t~ 89 (137)
T 2fz5_A 45 ASKDVILLGCP--AM-GSEELEDSVVEPFFTDLAPKLKGKKVGLFGSY 89 (137)
T ss_dssp HTCSEEEEECC--CB-TTTBCCHHHHHHHHHHHGGGCSSCEEEEEEEE
T ss_pred hcCCEEEEEcc--cc-CCCCCCHHHHHHHHHHhhhhcCCCEEEEEEec
Confidence 37899988442 11 1233455 8888888644 67888887763
No 82
>3myr_A Hydrogenase (NIFE) small subunit HYDA; [NIFE] hydrogenase, photosynthetic P sulfur bacterium, iron-sulfur cluster, NI-A state; HET: SF4; 2.10A {Allochromatium vinosum} SCOP: e.19.1.0
Probab=56.39 E-value=12 Score=27.02 Aligned_cols=42 Identities=12% Similarity=0.056 Sum_probs=31.3
Q ss_pred CccEEEEcCCccChhc-----cccChHHHHHHHHHHHCCCeEEEEcc
Q 045076 26 VFDLIALPVCMPDATN-----LKESKVLETIVKKQASNGRLYAAVCA 67 (145)
Q Consensus 26 ~~D~liipGG~~~~~~-----~~~~~~l~~~l~~~~~~~~~v~aic~ 67 (145)
..|+++|-|...++.. ........++++++.++.|+|.|+++
T Consensus 66 ~~dilvVEGsV~~p~~~~g~~~~gg~~~~e~l~e~~~~~k~VIA~G~ 112 (269)
T 3myr_A 66 GQYLVIVDGSIPGPDANPGFSTVAGHSNYSILMETVEHAAAVIAVGT 112 (269)
T ss_dssp TTCEEEEESBEECTTSCGGGBEETTEEHHHHHHHHHTTCSEEEEEHH
T ss_pred CCeEEEEeccCCCCcCCCccceeCChHHHHHHHHHcccCCEEEEecc
Confidence 5899999998532211 11235789999999999999999975
No 83
>1yqw_A Periplasmic [NIFE] hydrogenase small subunit; NI-Fe hydrogenase unready state, oxidoreductase; 1.83A {Desulfovibrio fructosovorans} PDB: 3cur_A 3cus_A 3h3x_A 1yrq_A 1frf_S
Probab=55.97 E-value=11 Score=27.07 Aligned_cols=41 Identities=10% Similarity=0.104 Sum_probs=30.1
Q ss_pred CccEEEEcCCccChhc----cccChHHHHHHHHHHHCCCeEEEEcc
Q 045076 26 VFDLIALPVCMPDATN----LKESKVLETIVKKQASNGRLYAAVCA 67 (145)
Q Consensus 26 ~~D~liipGG~~~~~~----~~~~~~l~~~l~~~~~~~~~v~aic~ 67 (145)
. |+++|-|....... .......+++++++.++.|+|.|+++
T Consensus 69 ~-dil~VeG~V~~~~~g~~~~~~g~~~~~~~~~~~~~~k~VIA~Gs 113 (264)
T 1yqw_A 69 G-YYLVVEGGLPTIDGGQWGMVAGHPMIETTKKAAAKAKGIICIGT 113 (264)
T ss_dssp C-EEEEEESBEECGGGGTTBEETTEEHHHHHHHHHHTCSCEEEESH
T ss_pred C-eEEEEeCCcccCCCccceeeCChHHHHHHHHHhcCCCEEEEecc
Confidence 5 99999997532111 11234778999999999999999976
No 84
>3hrd_D Nicotinate dehydrogenase small FES subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=55.69 E-value=2.5 Score=28.11 Aligned_cols=70 Identities=19% Similarity=0.199 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHCCCeEEEEcchhHHHhhhccccCCceeecCcchhhhhcccCceeccccEEEeCCeEecCCcchHHHHHH
Q 045076 47 VLETIVKKQASNGRLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAV 126 (145)
Q Consensus 47 ~l~~~l~~~~~~~~~v~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~~~~~~~~~~~v~dg~iiT~~g~~~~~~~~l 126 (145)
.+..+-+.|.+.+..=++.|+ |-++++...||+..+ +|. .+++++. .+||+--|.|...-++...
T Consensus 85 ~l~pvq~af~~~~~~QCGfCt-pG~ims~~all~~~~---~pt-~~eI~~a----------l~GNlCRCtgY~~I~~Av~ 149 (160)
T 3hrd_D 85 KPSLLQQCFLEAGAVQCGYCT-PGMILTAKALLDKNP---DPT-DEEITVA----------MSGNLCRCTGYIKIHAAVR 149 (160)
T ss_dssp BCCHHHHHHHHHTCCSSCSSH-HHHHHHHHHHHTTCS---SCC-HHHHHHH----------HTTCCCSSSCSHHHHHHHH
T ss_pred ccCHHHHHHHHcCCCcCCcch-hhHHHHHHHHHHhCC---CCC-HHHHHHH----------HcCCCCCCCCcHHHHHHHH
Confidence 344444556666777899999 667999999998643 222 2333332 3688888998887777666
Q ss_pred HHHHH
Q 045076 127 ALVEQ 131 (145)
Q Consensus 127 ~li~~ 131 (145)
...+.
T Consensus 150 ~aa~~ 154 (160)
T 3hrd_D 150 YAVER 154 (160)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55544
No 85
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=55.19 E-value=9.8 Score=24.72 Aligned_cols=39 Identities=3% Similarity=0.012 Sum_probs=22.2
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHH---HHCCCeEEEEcchh
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQ---ASNGRLYAAVCASP 69 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~---~~~~~~v~aic~g~ 69 (145)
+||.||+... ... ..-| ...|+... ..+++.++.+++++
T Consensus 56 ~~d~ii~Gsp--ty~--g~~p-~~~~l~~l~~~~~~~k~va~fgs~g 97 (159)
T 3fni_A 56 RCTGLVIGMS--PAA--SAAS-IQGALSTILGSVNEKQAVGIFETGG 97 (159)
T ss_dssp TEEEEEEECC--BTT--SHHH-HHHHHHHHHHHCCTTSEEEEECCSS
T ss_pred hCCEEEEEcC--cCC--CCcc-HHHHHHHHHhhcccCCEEEEEEcCC
Confidence 5898888432 111 1112 24455443 34789999998754
No 86
>1cc1_S Hydrogenase (small subunit); NI-Fe-Se hydrogenase, oxidoreductase; 2.15A {Desulfomicrobium baculatum} SCOP: e.19.1.1
Probab=53.39 E-value=17 Score=26.39 Aligned_cols=42 Identities=12% Similarity=0.135 Sum_probs=30.1
Q ss_pred CccEEEEcCCccChhc----cccCh----------HHHHHHHHHHHCCCeEEEEcc
Q 045076 26 VFDLIALPVCMPDATN----LKESK----------VLETIVKKQASNGRLYAAVCA 67 (145)
Q Consensus 26 ~~D~liipGG~~~~~~----~~~~~----------~l~~~l~~~~~~~~~v~aic~ 67 (145)
+.|+++|-|....... ..... ..+++++++.++.++|.|+++
T Consensus 70 ~~DilvVEGsV~~~~~g~~~~~~~~~~~~~~~~~~~~le~l~~~~~~ak~VIAvGt 125 (283)
T 1cc1_S 70 GNFFLLVEGAIPTAKEGRYCIVGETLDAKAHHHEVTMMELIRDLAPKSLATVAVGT 125 (283)
T ss_dssp TSSEEEEESBEECGGGGTTBEEEC---CCSSSCCEEHHHHHHHHGGGSSEEEEESH
T ss_pred CceEEEEeCCcccCCCceeeeecCccccccccccccHHHHHHHHhccCCEEEEEee
Confidence 5799999998532211 11112 678999999999999999975
No 87
>3rgw_S Membrane-bound hydrogenase (NIFE) small subunit H; [NIFE] hydrogenase, high-resolution knallgasbacteria, proteobacteria; 1.50A {Ralstonia eutropha}
Probab=53.19 E-value=17 Score=27.23 Aligned_cols=43 Identities=9% Similarity=0.006 Sum_probs=31.9
Q ss_pred CCccEEEEcCCccChhc----cccChHHHHHHHHHHHCCCeEEEEcc
Q 045076 25 AVFDLIALPVCMPDATN----LKESKVLETIVKKQASNGRLYAAVCA 67 (145)
Q Consensus 25 ~~~D~liipGG~~~~~~----~~~~~~l~~~l~~~~~~~~~v~aic~ 67 (145)
...|+++|-|....... .......+++++++.++.++|.|+++
T Consensus 68 ~~~dILlVEGsV~~~~~g~y~~~gg~~~~e~l~e~~~~~k~VIAvGt 114 (339)
T 3rgw_S 68 KGNYILAVEGNPPLNQDGMSCIIGGRPFIEQLKYVAKDAKAIISWGS 114 (339)
T ss_dssp TTCSEEEEESBCBCSGGGTTBEETTEEHHHHHHHHHTTCSEEEEEHH
T ss_pred CCCcEEEEeeeccCCCCcceeccCChHHHHHHHHHccCCCEEEEecc
Confidence 36899999998632110 11235789999999999999999975
No 88
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=53.04 E-value=19 Score=22.28 Aligned_cols=72 Identities=15% Similarity=0.140 Sum_probs=41.0
Q ss_pred CCccEEEEcCCccChhccccCh--HHHHHHHHHHH--CCCeEEEEcchhHHHhhhccccCCceeecCcchhhhhcccCce
Q 045076 25 AVFDLIALPVCMPDATNLKESK--VLETIVKKQAS--NGRLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACAA 100 (145)
Q Consensus 25 ~~~D~liipGG~~~~~~~~~~~--~l~~~l~~~~~--~~~~v~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~~~~~ 100 (145)
.+||.|++... ...-...| .+.+|+++... +++.++.++++++. .+ .+.....+.+++.|+.
T Consensus 44 ~~~d~iiig~p---ty~~g~~p~~~~~~fl~~l~~~l~~k~~~~f~t~g~~--------~~---~a~~~l~~~l~~~G~~ 109 (138)
T 5nul_A 44 LNEDILILGCS---AMTDEVLEESEFEPFIEEISTKISGKKVALFGSYGWG--------DG---KWMRDFEERMNGYGCV 109 (138)
T ss_dssp TTCSEEEEEEC---CBTTTBCCTTTHHHHHHHHGGGCTTCEEEEEEEESSS--------CS---HHHHHHHHHHHHTTCE
T ss_pred hhCCEEEEEcC---ccCCCCCChHHHHHHHHHHHhhcCCCEEEEEEecCCC--------CC---hHHHHHHHHHHHCCCE
Confidence 47998888432 11112223 68888888764 78899888875431 01 1122345566666666
Q ss_pred eccccEEEeC
Q 045076 101 TVESRVQQDG 110 (145)
Q Consensus 101 ~~~~~~v~dg 110 (145)
.+...+..++
T Consensus 110 ~v~~~~~~~~ 119 (138)
T 5nul_A 110 VVETPLIVQN 119 (138)
T ss_dssp ECSCCEEEES
T ss_pred EECCceEEec
Confidence 6655555444
No 89
>2zuv_A Lacto-N-biose phosphorylase; beta-alpha-barrel, TIM barrel, glycosyltransferase, transferase; HET: NDG; 1.85A {Bifidobacterium longum} PDB: 2zus_A* 2zuu_A* 2zut_A* 2zuw_A*
Probab=51.69 E-value=29 Score=28.65 Aligned_cols=44 Identities=16% Similarity=0.139 Sum_probs=33.5
Q ss_pred CCCccEEEEcCCcc---ChhccccChHHHHHHHHHHHCCCeEEEEcc
Q 045076 24 DAVFDLIALPVCMP---DATNLKESKVLETIVKKQASNGRLYAAVCA 67 (145)
Q Consensus 24 ~~~~D~liipGG~~---~~~~~~~~~~l~~~l~~~~~~~~~v~aic~ 67 (145)
+++||+||-+|-.. .......+|...+.||++..+|.-+.+++.
T Consensus 498 L~d~DVIIn~G~A~TalSgg~~W~~p~~~~aLR~fV~~GGgLIgVGe 544 (759)
T 2zuv_A 498 DSDIDVIINGGPVDTAFTGGDVWTNPKLVETVRAWVRGGGAFVGVGE 544 (759)
T ss_dssp CTTCCEEEEEECTTSTTTCGGGGGCHHHHHHHHHHHHTTCEEEEEES
T ss_pred cccCCEEEecCcchhcccCccccCCHHHHHHHHHHHHcCCcEEEeCC
Confidence 45999999998210 112234579999999999999999999987
No 90
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=51.08 E-value=13 Score=27.33 Aligned_cols=59 Identities=10% Similarity=0.113 Sum_probs=38.3
Q ss_pred ccCCCCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHH---hhhccc
Q 045076 19 VSDCRDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVA---LGSWGL 78 (145)
Q Consensus 19 ~~~~~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~---La~agl 78 (145)
+.+++...+|++++=|..+....-..++.+.+-|.+..+.+..+++.|+++. + |.++|+
T Consensus 179 l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTYtaag~-VRR~L~~aGF 240 (308)
T 3vyw_A 179 IKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSYSSSLS-VRKSLLTLGF 240 (308)
T ss_dssp GGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEESCCCHH-HHHHHHHTTC
T ss_pred HhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEEeCcHH-HHHHHHHCCC
Confidence 3344333699999977533222234567777777777778888999998764 3 555555
No 91
>1rm6_C 4-hydroxybenzoyl-COA reductase gamma subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: a.56.1.1 d.15.4.2 PDB: 1sb3_C*
Probab=50.15 E-value=1.9 Score=28.68 Aligned_cols=67 Identities=12% Similarity=0.111 Sum_probs=44.1
Q ss_pred HHHHHCCCeEEEEcchhHHHhhhccccCCceeecCcchhhhhcccCceeccccEEEeCCeEecCCcchHHHHHHHHHHHh
Q 045076 53 KKQASNGRLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVALVEQL 132 (145)
Q Consensus 53 ~~~~~~~~~v~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~~~~~~~~~~~v~dg~iiT~~g~~~~~~~~l~li~~~ 132 (145)
+.+.+.+..-++.|+. .++++...+|...+ .| ..+++++. .+||++-|.|.....+......+..
T Consensus 90 ~a~~~~~~~qCG~Ctp-g~im~a~~ll~~~~---~p-t~~~i~~~----------l~gnlcRCtgy~~i~~A~~~~~~~~ 154 (161)
T 1rm6_C 90 AAFHEKLGTQCGFCTP-GMIMASEALLRKNP---SP-SRDEIKAA----------LAGNLCRCTGYVKIIKSVETAAAAR 154 (161)
T ss_dssp HHHHHHTCCSSCSSHH-HHHHHHHHHHHHCS---SC-CHHHHHHH----------TTTCCCSSSCSHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcCCCCch-HHHHHHHHHHhcCC---CC-CHHHHHHH----------HcCCeECCCCCHHHHHHHHHHHHHH
Confidence 3344555688999994 56788888876432 12 22333332 3689999999988888877776655
Q ss_pred cC
Q 045076 133 YR 134 (145)
Q Consensus 133 ~g 134 (145)
+.
T Consensus 155 ~~ 156 (161)
T 1rm6_C 155 LC 156 (161)
T ss_dssp HC
T ss_pred hh
Confidence 43
No 92
>1yq9_A Periplasmic [NIFE] hydrogenase small subunit; oxidoreductase; 2.35A {Desulfovibrio gigas} SCOP: e.19.1.1 PDB: 2frv_S 1frv_A
Probab=49.64 E-value=16 Score=26.28 Aligned_cols=42 Identities=10% Similarity=0.010 Sum_probs=30.2
Q ss_pred CccEEEEcCCccChhc----cccChHHHHHHHHHHHCCCeEEEEcc
Q 045076 26 VFDLIALPVCMPDATN----LKESKVLETIVKKQASNGRLYAAVCA 67 (145)
Q Consensus 26 ~~D~liipGG~~~~~~----~~~~~~l~~~l~~~~~~~~~v~aic~ 67 (145)
+-|+++|-|....... .......+++++++.++.++|.|+++
T Consensus 66 ~~diliVeGsV~~~~~g~~~~~~~~~~~~~l~~~~~~~k~VIA~Gs 111 (264)
T 1yq9_A 66 GDFVCVIEGGIPMGDGGYWGKVGGRNMYDICAEVAPKAKAVIAIGT 111 (264)
T ss_dssp SSEEEEEESBEECGGGSTTBEETTEEHHHHHHHHGGGSSEEEEEHH
T ss_pred CCeEEEEeCCcccCCCcceeecCcHHHHHHHHHHhccCCEEEEecc
Confidence 5689999987532210 11235788999999999999999965
No 93
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=49.32 E-value=12 Score=24.69 Aligned_cols=41 Identities=17% Similarity=0.116 Sum_probs=26.8
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHHH-------CCCeEEEEcchh
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQAS-------NGRLYAAVCASP 69 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~-------~~~~v~aic~g~ 69 (145)
++|.||+.. + .....-++.+..||.+... ++|+++.+++++
T Consensus 71 ~aD~ii~gs--P-~y~~~~~~~lk~~ld~~~~~~~~~~l~~K~~~~~~t~g 118 (200)
T 2a5l_A 71 NCAGLALGS--P-TRFGNMASPLKYFLDGTSSLWLTGSLVGKPAAVFTSTA 118 (200)
T ss_dssp TCSEEEEEE--E-CBTTBCCHHHHHHHHTCHHHHHHTTTTTCEEEEEEEBS
T ss_pred HCCEEEEEc--C-hhccCccHHHHHHHHHHHHHhhccccCCCEEEEEEecC
Confidence 789998833 2 2222346778888887532 678888877754
No 94
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=46.83 E-value=35 Score=27.77 Aligned_cols=39 Identities=10% Similarity=0.198 Sum_probs=27.5
Q ss_pred CCCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEE-EEcc
Q 045076 23 RDAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYA-AVCA 67 (145)
Q Consensus 23 ~~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~-aic~ 67 (145)
+.++|++||+|.-. .-++.+.+.|+++.++|..+. +-.+
T Consensus 449 dL~~Yklvv~P~~~------~~~~~~~~~L~~yV~~GG~lv~t~~s 488 (675)
T 3tty_A 449 DLSKYKVVIAPVMY------MVKPGFAERVERFVAQGGTFVTTFFS 488 (675)
T ss_dssp CCTTCSEEEETTCC------BCCTTHHHHHHHHHHTTCEEEEETTC
T ss_pred CcccCCEEEEeccE------ecCHHHHHHHHHHHhcCCEEEEEccC
Confidence 45589999999863 235677888888887775544 4444
No 95
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=45.56 E-value=25 Score=26.22 Aligned_cols=41 Identities=12% Similarity=-0.044 Sum_probs=28.2
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHHH----CCCeEEEEcchh
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQAS----NGRLYAAVCASP 69 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~----~~~~v~aic~g~ 69 (145)
++|.|++..- .......+.+..||.+... ++|+++.+++++
T Consensus 307 ~~D~iiigsP---~y~~~~~~~~k~fld~l~~~~~~~~K~~~~~~t~g 351 (414)
T 2q9u_A 307 DSGAVAFASP---TLNNTMMPSVAAALNYVRGLTLIKGKPAFAFGAFG 351 (414)
T ss_dssp TCSEEEEECC---CBTTBCCHHHHHHHHHHHHHTTTTTSBEEEEEEES
T ss_pred hCCEEEEEcC---ccCcCchHHHHHHHHHHHhhcccCCCEEEEEEecC
Confidence 7899988442 2223446678888887653 689999888764
No 96
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=44.28 E-value=17 Score=23.98 Aligned_cols=39 Identities=15% Similarity=0.129 Sum_probs=27.0
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHHH------CCCeEEEEcc
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQAS------NGRLYAAVCA 67 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~------~~~~v~aic~ 67 (145)
++|.||+.. + ...-.-.+.+..||.+... ++++++.+++
T Consensus 52 ~aD~ii~gs--P-~y~g~~~~~lk~fld~~~~~~~~~l~gk~~~~~~t 96 (188)
T 2ark_A 52 WADGLAVGS--P-TNMGLVSWKMKRFFDDVLGDLWGEIDGKIACAFSS 96 (188)
T ss_dssp HCSEEEEEE--E-CBTTBCCHHHHHHHHHTGGGTTTSCTTCEEEEEEE
T ss_pred hCCEEEEEe--C-ccCCcCCHHHHHHHHHHhhhhHHHhCCCeEEEEEE
Confidence 689998833 2 2223346788899988654 6788888777
No 97
>3ayx_B Membrane-bound hydrogenase small subunit; oxidoreductase, membrane-bound NI-Fe hydrogenase; 1.18A {Hydrogenovibrio marinus} PDB: 3ayy_B 3ayz_B
Probab=41.58 E-value=22 Score=25.87 Aligned_cols=42 Identities=10% Similarity=0.077 Sum_probs=30.1
Q ss_pred CccEEEEcCCccChhc----cccChHHHHHHHHHHHCCCeEEEEcc
Q 045076 26 VFDLIALPVCMPDATN----LKESKVLETIVKKQASNGRLYAAVCA 67 (145)
Q Consensus 26 ~~D~liipGG~~~~~~----~~~~~~l~~~l~~~~~~~~~v~aic~ 67 (145)
+.|+++|-|....... .......+++++++.++.++|.|+++
T Consensus 75 ~~dilvVeG~V~~~~~g~~~~~~g~~~l~~~~~~~~~ak~VIA~Gs 120 (283)
T 3ayx_B 75 GNYILAVEGNPPLNQDGMSCIIGGRPFSEQLKRMADDAKAIISWGS 120 (283)
T ss_dssp TTEEEEEESBCBCSGGGTTBEETTEEHHHHHHHHHHTEEEEEEEHH
T ss_pred CCeEEEEeCCCccCCCcceeeeCCcHHHHHHHHHcccCCEEEEeee
Confidence 5789999987532110 11234788999999999999999964
No 98
>3uqy_S Hydrogenase-1 small chain; membrane-bound hydrogenase, oxidoreductase; HET: LMT; 1.47A {Escherichia coli} PDB: 3usc_S* 3use_S*
Probab=41.15 E-value=17 Score=27.07 Aligned_cols=42 Identities=12% Similarity=0.050 Sum_probs=30.9
Q ss_pred CccEEEEcCCccChhc----cccChHHHHHHHHHHHCCCeEEEEcc
Q 045076 26 VFDLIALPVCMPDATN----LKESKVLETIVKKQASNGRLYAAVCA 67 (145)
Q Consensus 26 ~~D~liipGG~~~~~~----~~~~~~l~~~l~~~~~~~~~v~aic~ 67 (145)
..|+++|-|....... .......+++++++.++.++|.|+++
T Consensus 69 ~~dILlVeGsV~~~~~G~y~~~gg~~~l~~l~e~~~~ak~VIAvGs 114 (335)
T 3uqy_S 69 GKYILAVEGNPPLGEQGMFCISSGRPFIEKLKRAAAGASAIIAWGT 114 (335)
T ss_dssp TTEEEEEESBCBCGGGGTTBEETTEEHHHHHHHHHHHEEEEEEEHH
T ss_pred CCeEEEEeccCCCCCCcceeccCCcHHHHHHHHHccCCCEEEEecc
Confidence 5799999998532111 11234789999999999999999975
No 99
>1obo_A Flavodoxin; electron transfer, flavoprotein, electron transport; HET: FMN; 1.2A {Anabaena SP} SCOP: c.23.5.1 PDB: 2v5v_A* 1dx9_A 1rcf_A* 1flv_A* 1obv_A* 2v5u_A* 1ftg_A 1qhe_A 2kqu_A 3esy_A* 3esz_A* 3esx_A*
Probab=40.98 E-value=15 Score=23.70 Aligned_cols=43 Identities=14% Similarity=0.153 Sum_probs=24.6
Q ss_pred CCccEEEEcCCccChhccccChHHHHHHHHHHH---CCCeEEEEcchh
Q 045076 25 AVFDLIALPVCMPDATNLKESKVLETIVKKQAS---NGRLYAAVCASP 69 (145)
Q Consensus 25 ~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~---~~~~v~aic~g~ 69 (145)
.+||.||+.. +....=...+.+.+|+.+... +++.++.+|+|+
T Consensus 45 ~~~d~ii~g~--p~y~~g~~p~~~~~fl~~l~~~~l~~k~~~~f~tg~ 90 (169)
T 1obo_A 45 NDYQYLIIGC--PTLNIGELQSDWEGLYSELDDVDFNGKLVAYFGTGD 90 (169)
T ss_dssp GGCSEEEEEE--EEETTTEECHHHHHHHTTGGGCCCTTCEEEEEEECC
T ss_pred hhCCEEEEEE--eeCCCCcCCHHHHHHHHHhhhcCcCCCEEEEEEECC
Confidence 3799998833 211111123445667665433 678888888754
No 100
>1n62_A Carbon monoxide dehydrogenase small chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: a.56.1.1 d.15.4.2 PDB: 1n5w_A* 1n61_A* 1n60_A* 1n63_A* 1zxi_A*
Probab=40.74 E-value=4 Score=27.30 Aligned_cols=70 Identities=14% Similarity=0.199 Sum_probs=47.0
Q ss_pred HHHHHHHHHHCCCeEEEEcchhHHHhhhccccCCceeecCcchhhhhcccCceeccccEEEeCCeEecCCcchHHHHHHH
Q 045076 48 LETIVKKQASNGRLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESRVQQDGKVVTTRGPGTTMEFAVA 127 (145)
Q Consensus 48 l~~~l~~~~~~~~~v~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~~~~~~~~~~~v~dg~iiT~~g~~~~~~~~l~ 127 (145)
+...-+.|.+.+..-++.|+ +.++++...||+..+ .|. .+++++. .+||+.-|.|....++....
T Consensus 87 ~~pvq~a~~~~~~~QCG~Ct-pG~imsa~all~~~~---~pt-~~eI~~~----------l~gNlCRCtgY~~I~~Av~~ 151 (166)
T 1n62_A 87 LSALQEGFRMMHGLQCGYCT-PGMIMRSHRLLQENP---SPT-EAEIRFG----------IGGNLCRCTGYQNIVKAIQY 151 (166)
T ss_dssp CCHHHHHHHHTTCCSSCSSH-HHHHHHHHHHHHHCS---SCC-HHHHHHH----------TTTCCCSSSTTHHHHHHHHH
T ss_pred cCHHHHHHHHcCCccCCccc-hhHHHHHHHHHHcCC---CCC-HHHHHHH----------HcCCccCCCCCHHHHHHHHH
Confidence 34444556677778899999 567899999987543 222 2333332 36899999998877777666
Q ss_pred HHHHh
Q 045076 128 LVEQL 132 (145)
Q Consensus 128 li~~~ 132 (145)
..+..
T Consensus 152 ~a~~~ 156 (166)
T 1n62_A 152 AAAKI 156 (166)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 65543
No 101
>3d7n_A Flavodoxin, WRBA-like protein; structural genomics, PSI, MCS protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens}
Probab=40.06 E-value=18 Score=24.09 Aligned_cols=40 Identities=13% Similarity=0.132 Sum_probs=26.2
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHH-------HCCCeEEEEcch
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQA-------SNGRLYAAVCAS 68 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~-------~~~~~v~aic~g 68 (145)
++|.||+.. + ...-.-++.+..||.+.. -++|+++.++++
T Consensus 54 ~~D~ii~gs--P-~y~g~~~~~~k~fld~~~~~~~~~~l~gK~~~~f~s~ 100 (193)
T 3d7n_A 54 AADAIIFGT--P-TYMGGPSWQFKKFADASSKPWFSAKWQDKVFGGFTNS 100 (193)
T ss_dssp HCSEEEEEE--E-EETTEECHHHHHHHHHTHHHHHTTTTTTCEEEEEEEE
T ss_pred HCCEEEEEe--C-ccCCCccHHHHHHHHHhhhhccccccCCCEEEEEEEC
Confidence 789998833 2 222234667888887754 367888877765
No 102
>3qq5_A Small GTP-binding protein; hydrogenase, H-cluster, HYDA maturation, GTP-binding domain, maturation enzyme, oxidoreductase; 2.99A {Thermotoga neapolitana}
Probab=38.27 E-value=39 Score=25.85 Aligned_cols=48 Identities=13% Similarity=-0.029 Sum_probs=36.8
Q ss_pred CCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhccccC
Q 045076 25 AVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSWGLLK 80 (145)
Q Consensus 25 ~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~agll~ 80 (145)
++||.+|=+||- +.+-..++.-++.+.+++.++.-.+- ++-.-.|+|+
T Consensus 370 ~~~~l~i~cg~c-----m~~~~~~~~r~~~~~~~~~p~~nyg~---~~a~~~g~l~ 417 (423)
T 3qq5_A 370 ENAKLIIHCGGC-----ILNRSAMMRRVRMAKRLGIPMTNYGV---TISYLHGVLE 417 (423)
T ss_dssp SSCSEEEECTTT-----CCCHHHHHHHHHHHHHTTCCEEEHHH---HHHHTTCCCS
T ss_pred ccCcEEEECcch-----hcCHHHHHHHHHHHHHcCCCeecHHH---HHHHHhCcHH
Confidence 589999999984 34566888999999999999988754 2233458886
No 103
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=36.34 E-value=32 Score=22.63 Aligned_cols=40 Identities=23% Similarity=0.260 Sum_probs=27.4
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHH------HCCCeEEEEcch
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQA------SNGRLYAAVCAS 68 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~------~~~~~v~aic~g 68 (145)
++|.||+.. + .....-.+.+..||.+.. -++|+++.++++
T Consensus 72 ~aD~ii~~s--P-~y~~~~p~~lK~~iD~~~~~~~~~l~gK~~~~~~t~ 117 (193)
T 1rtt_A 72 AADALLFAT--P-EYNYSMAGVLKNAIDWASRPPEQPFSGKPAAILGAS 117 (193)
T ss_dssp HCSEEEEEC--C-EETTEECHHHHHHHHHHTCSSSCTTTTCEEEEEEEC
T ss_pred hCCEEEEEc--c-ccccCcCHHHHHHHHHhccccCcccCCCeEEEEEeC
Confidence 678888833 2 233345778889998875 357888888875
No 104
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=34.06 E-value=36 Score=25.16 Aligned_cols=41 Identities=10% Similarity=-0.131 Sum_probs=26.7
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHHH------CCCeEEEEcchh
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQAS------NGRLYAAVCASP 69 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~------~~~~v~aic~g~ 69 (145)
++|.|++..- ...-.-.+.+..|+.+... ++|+++.+|+++
T Consensus 307 ~~d~iiigsP---~y~~~~~~~~k~~ld~l~~~~~~~l~~k~~~~~~~~g 353 (404)
T 2ohh_A 307 ESGAIALGAP---TIYDEPYPSVGDLLMYLRGLKFNRTLTRKALVFGSMG 353 (404)
T ss_dssp TCSEEEEECC---EETTEECTHHHHHHHHHHHHCGGGTCCEEEEEEEEES
T ss_pred HCCEEEEECc---cccccchHHHHHHHHHhhhccccccCCCEEEEEEecC
Confidence 7899988442 2222335567777776543 688888888754
No 105
>2wpn_A Periplasmic [nifese] hydrogenase, small subunit; metal-binding, oxidoreductase, oxygen tolerance; HET: FSX SBY PSW; 2.04A {Desulfovibrio vulgaris}
Probab=34.00 E-value=22 Score=26.25 Aligned_cols=42 Identities=12% Similarity=0.077 Sum_probs=30.0
Q ss_pred CccEEEEcCCccChhc----cc-----cChHHHHHHHHHHHCCCeEEEEcc
Q 045076 26 VFDLIALPVCMPDATN----LK-----ESKVLETIVKKQASNGRLYAAVCA 67 (145)
Q Consensus 26 ~~D~liipGG~~~~~~----~~-----~~~~l~~~l~~~~~~~~~v~aic~ 67 (145)
+.|+++|-|....... .. .....+++++++.++.++|.|+++
T Consensus 104 ~~DIliVEGsV~~~~~g~~~~~~~~~~~~~~~~e~l~e~~~~ak~VIAvGs 154 (317)
T 2wpn_A 104 GKFFLVIEGSVPVEADGKYCIIGEANHHEISMVDALKEFGPNAAAVLAVGT 154 (317)
T ss_dssp TTEEEEEESBEECTGGGTTBEEEEETTEEEEHHHHHHHHGGGEEEEEEEHH
T ss_pred CCeEEEEeCCcccCCCcceeeecccccCCcCHHHHHHHHhccCCEEEEecc
Confidence 5799999998532111 00 124678999999999999999965
No 106
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=33.77 E-value=27 Score=22.37 Aligned_cols=31 Identities=13% Similarity=0.150 Sum_probs=22.0
Q ss_pred cEEEeCCeEecCCcchHHHHHHHHHHHhcCh
Q 045076 105 RVQQDGKVVTTRGPGTTMEFAVALVEQLYRK 135 (145)
Q Consensus 105 ~~v~dg~iiT~~g~~~~~~~~l~li~~~~g~ 135 (145)
-++++|+.++........+-.+.+|+.+..+
T Consensus 153 tfiINGky~v~~~~~~s~e~~~~~i~~Ll~k 183 (184)
T 4dvc_A 153 AVVVNNRYLVQGQSAKSLDEYFDLVNYLLTL 183 (184)
T ss_dssp EEEETTTEEECGGGCSSHHHHHHHHHHHTTC
T ss_pred EEEECCEEeeCCcCCCCHHHHHHHHHHHHhC
Confidence 4888999776655555667778888877643
No 107
>2gk3_A Putative cytoplasmic protein; STM3548, structural genomics, PSI, P structure initiative; 2.25A {Salmonella typhimurium} SCOP: c.23.16.9
Probab=33.44 E-value=59 Score=22.81 Aligned_cols=41 Identities=12% Similarity=0.088 Sum_probs=28.6
Q ss_pred CCccEEEEcCCccChhccc------cC----hHHHHHHHHHHHCCCeEEEEcc
Q 045076 25 AVFDLIALPVCMPDATNLK------ES----KVLETIVKKQASNGRLYAAVCA 67 (145)
Q Consensus 25 ~~~D~liipGG~~~~~~~~------~~----~~l~~~l~~~~~~~~~v~aic~ 67 (145)
++||+||+.+.. ...+. .+ +...+.|+++.++|.-+..+..
T Consensus 76 ~~yDvIIl~~~~--~~~l~~~~~~~~~~~~~~~~~~~l~~~V~~GGgll~igG 126 (256)
T 2gk3_A 76 NRYDVIVISDIG--SNTFLLQNETFYQLKIKPNALESIKEYVKNGGGLLMIGG 126 (256)
T ss_dssp HTCSEEEEESCC--HHHHHSCHHHHTTCCCCCCHHHHHHHHHHTTCEEEEECS
T ss_pred hcCCEEEEeCCc--hhhcccccccccccccChHHHHHHHHHHHhCCEEEEECC
Confidence 489999998742 22222 11 6677888999888988888854
No 108
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=32.97 E-value=20 Score=23.54 Aligned_cols=42 Identities=19% Similarity=0.252 Sum_probs=26.8
Q ss_pred CCccEEEEcCCccChhccccChHHHHHHHHHH-------HCCCeEEEEcchh
Q 045076 25 AVFDLIALPVCMPDATNLKESKVLETIVKKQA-------SNGRLYAAVCASP 69 (145)
Q Consensus 25 ~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~-------~~~~~v~aic~g~ 69 (145)
.++|.||+.. + .....-++.+..||.+.. -++|+++.+++++
T Consensus 67 ~~aD~ii~gs--P-~y~~~~~~~lk~~ld~~~~~~~~~~l~~K~~~~~~t~g 115 (198)
T 3b6i_A 67 ADYDAIIFGT--P-TRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTG 115 (198)
T ss_dssp GGCSEEEEEE--E-EETTEECHHHHHHHTTCHHHHHHTTTTTCEEEEEEEES
T ss_pred HHCCEEEEEe--C-hhcCCchHHHHHHHHHhhhhhhhcccCCCEEEEEEeCC
Confidence 3799998832 2 222234667778887653 3678888877654
No 109
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=32.36 E-value=22 Score=23.50 Aligned_cols=41 Identities=17% Similarity=0.100 Sum_probs=25.9
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHH-------HCCCeEEEEcchh
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQA-------SNGRLYAAVCASP 69 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~-------~~~~~v~aic~g~ 69 (145)
++|.||+.. + .....-.+.+..||.+.. -++|+++.+++++
T Consensus 70 ~aD~ii~gs--P-~y~~~~~~~lk~~ld~~~~~~~~~~l~gK~~~~~~t~g 117 (199)
T 2zki_A 70 WADGFAIGS--P-TRYGNMAGGLKTFLDTTAILWKDNVLYGKPVTFFTEAS 117 (199)
T ss_dssp HCSEEEEEE--E-CBTTBCCHHHHHHHHTTHHHHHTTSSTTCEEEEEEEBS
T ss_pred hCCEEEEEC--C-ccccCccHHHHHHHHHhhhcccccccCCCEEEEEEeCC
Confidence 689998832 2 222334677888887752 3578887777644
No 110
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=31.78 E-value=94 Score=20.03 Aligned_cols=36 Identities=14% Similarity=-0.000 Sum_probs=27.7
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcc
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCA 67 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~ 67 (145)
+-|++|+..-. ..++.+.+.++.+.++|..+.+|+.
T Consensus 110 ~~Dvvi~iS~s------G~t~~~~~~~~~ak~~g~~vi~iT~ 145 (188)
T 1tk9_A 110 EKDVLIGISTS------GKSPNVLEALKKAKELNMLCLGLSG 145 (188)
T ss_dssp TTCEEEEECSS------SCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCEEEEEeCC------CCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 45777776642 2567889999999999988888876
No 111
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=30.61 E-value=1e+02 Score=20.21 Aligned_cols=36 Identities=11% Similarity=0.010 Sum_probs=28.3
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcc
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCA 67 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~ 67 (145)
+-|++|+.... ...+.+.+.++.+.++|..+.+|..
T Consensus 113 ~~DvvI~iS~S------G~t~~~i~~~~~ak~~g~~vI~IT~ 148 (199)
T 1x92_A 113 PGDVLLAISTS------GNSANVIQAIQAAHDREMLVVALTG 148 (199)
T ss_dssp TTCEEEEECSS------SCCHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEEeCC------CCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 55887776652 2577899999999999988888876
No 112
>2rmf_A Urocortin, HUCN1; CRF ligand, sauvagine, astressin2B, urocortins, urotensins, CRF receptors, amidation, cleavage on PAIR of basic residues, hormone; NMR {Synthetic} SCOP: j.16.1.1
Probab=30.25 E-value=41 Score=16.66 Aligned_cols=24 Identities=13% Similarity=0.405 Sum_probs=17.3
Q ss_pred CcchHHHHHHHHHHHhcChhHHHH
Q 045076 117 GPGTTMEFAVALVEQLYRKGKADE 140 (145)
Q Consensus 117 g~~~~~~~~l~li~~~~g~~~a~~ 140 (145)
.|.-++|+.+++++...--..+++
T Consensus 2 dPpiSiDLTFHlLR~miemar~e~ 25 (40)
T 2rmf_A 2 NPSLSIDLTFHLLRTLLELARTQS 25 (40)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcchhhHHHHHHHHHHHHHHHH
Confidence 355689999999998875444444
No 113
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=30.04 E-value=1e+02 Score=20.00 Aligned_cols=36 Identities=8% Similarity=-0.003 Sum_probs=27.1
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcc
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCA 67 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~ 67 (145)
+-|++|+.... ...+.+.+.++.+.++|..+.+|+.
T Consensus 116 ~~d~vI~iS~S------G~t~~~~~~~~~ak~~g~~vI~IT~ 151 (198)
T 2xbl_A 116 EGDVLIGYSTS------GKSPNILAAFREAKAKGMTCVGFTG 151 (198)
T ss_dssp TTCEEEEECSS------SCCHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEEeCC------CCCHHHHHHHHHHHHCCCeEEEEEC
Confidence 45777766642 2467888999999999988888875
No 114
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=29.73 E-value=1.3e+02 Score=20.61 Aligned_cols=57 Identities=16% Similarity=0.173 Sum_probs=36.2
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcc----------hhHHHhhhccccCCceeecCc
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCA----------SPAVALGSWGLLKGLKATCYP 88 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~----------g~~~~La~agll~g~~~t~~~ 88 (145)
+||+|+| .... +. ++...++|++..+.++.|...+- +..-+|+.|..+.-.++-||.
T Consensus 101 ~~dvViI----DEaQ-F~-~~~~V~~l~~l~~~~~~Vi~~Gl~~DF~~~~F~~~~~Ll~~AD~Vtel~aiC~~ 167 (214)
T 2j9r_A 101 EMDVIAI----DEVQ-FF-DGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCSA 167 (214)
T ss_dssp SCCEEEE----CCGG-GS-CTTHHHHHHHHHHTTCEEEEEECSBCTTSCBCTTHHHHHHHCSEEEECCCBCTT
T ss_pred CCCEEEE----ECcc-cC-CHHHHHHHHHHhhCCCEEEEEecccccccCccccHHHHHHhcccEEeeeeEecC
Confidence 5898887 2222 23 34445889887777776655443 345578888777766666663
No 115
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=29.33 E-value=49 Score=21.60 Aligned_cols=40 Identities=18% Similarity=0.284 Sum_probs=26.5
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHHH----------------CCCeEEEEcch
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQAS----------------NGRLYAAVCAS 68 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~----------------~~~~v~aic~g 68 (145)
++|.||+.. + .....-+..+..||.+... ++|.++.++++
T Consensus 86 ~aD~iv~~~--P-~y~~~~p~~lK~~iD~~~~~~~~~~~~~~~~~~~l~~K~~~~i~t~ 141 (201)
T 1t5b_A 86 AHDVIVIAA--P-MYNFNIPTQLKNYFDLIARAGITFRYTEKGPEGLVTGKRAVVLSSR 141 (201)
T ss_dssp HCSEEEEEC--C-CBTTBCCHHHHHHHHHHCCBTTTEEEETTEEEESSCSCEEEEEEEC
T ss_pred hCCEEEEEe--C-cccCcCCHHHHHHHHHheeCCCceecCCCCCccCCCCCeEEEEEec
Confidence 689888833 2 3333457788999998763 46666666654
No 116
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=29.06 E-value=30 Score=23.12 Aligned_cols=41 Identities=7% Similarity=0.165 Sum_probs=26.0
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHH-------HCCCeEEEEcchh
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQA-------SNGRLYAAVCASP 69 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~-------~~~~~v~aic~g~ 69 (145)
++|.||+.. + .....-.+.+..||.+.. -++|+++.+++++
T Consensus 78 ~aD~ii~gs--P-~y~~~~~~~lk~~ld~~~~~~~~~~l~gK~~~~~~t~g 125 (211)
T 1ydg_A 78 WAEAIVFSS--P-TRFGGATSQMRAFIDTLGGLWSSGKLANKTFSAMTSAQ 125 (211)
T ss_dssp HCSEEEEEE--E-EETTEECHHHHHHHHTTHHHHHTTTTTTCEEEEEEEES
T ss_pred HCCEEEEEc--C-ccccCccHHHHHHHHHhccccccccCCCCEEEEEEeCC
Confidence 789998832 2 222344677888888753 2577777766643
No 117
>1rli_A Trp repressor binding protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bacillus subtilis} SCOP: c.23.5.6
Probab=28.72 E-value=43 Score=21.60 Aligned_cols=41 Identities=7% Similarity=0.097 Sum_probs=25.5
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHH--------------HCCCeEEEEcchh
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQA--------------SNGRLYAAVCASP 69 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~--------------~~~~~v~aic~g~ 69 (145)
++|.||+.. + .....-+..+..||.+.. -++|.++.+++++
T Consensus 71 ~aD~ii~~~--P-~y~~~~p~~lK~~iD~~~~~~~~~~~~~~~~~l~~K~~~~i~t~g 125 (184)
T 1rli_A 71 QCHILIFAT--P-IYWFGMSGTLKLFIDRWSQTLRDPRFPDFKQQMSVKQAYVIAVGG 125 (184)
T ss_dssp TCSEEEEEE--E-CBTTBCCHHHHHHHHTHHHHTTCTTSTTHHHHHHTSEEEEEEEES
T ss_pred hCCEEEEEe--C-ccccCCcHHHHHHHHHhHHhccCccccccccccCCCeEEEEEeCC
Confidence 789998832 2 222345667778887653 2467777776643
No 118
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=28.55 E-value=1.1e+02 Score=19.81 Aligned_cols=36 Identities=11% Similarity=0.045 Sum_probs=28.1
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcc
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCA 67 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~ 67 (145)
+-|++|+.... ..++.+.+.++.+.++|..+.+|+.
T Consensus 109 ~~DvvI~iS~S------G~t~~~i~~~~~ak~~g~~vI~IT~ 144 (196)
T 2yva_A 109 AGDVLLAISTR------GNSRDIVKAVEAAVTRDMTIVALTG 144 (196)
T ss_dssp TTCEEEEECSS------SCCHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEEeCC------CCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 45777776652 2577899999999999988888876
No 119
>3eeq_A Putative cobalamin biosynthesis protein G homolog; structural genomics, unknown function, PSI-2, protein structure initiative; 2.30A {Sulfolobus solfataricus} SCOP: c.151.1.1 c.152.1.1
Probab=28.04 E-value=79 Score=23.42 Aligned_cols=70 Identities=13% Similarity=-0.109 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHCCCeEEEEcchhHHHhhhccccCCceeecCcchhhhhcccCceecccc-EEEe--CCeE---ecCCcch
Q 045076 47 VLETIVKKQASNGRLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACAATVESR-VQQD--GKVV---TTRGPGT 120 (145)
Q Consensus 47 ~l~~~l~~~~~~~~~v~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~~~~~~~~~~-~v~d--g~ii---T~~g~~~ 120 (145)
.+.+++++.+++...+..||+.|..+=.-+.+|++|. .|.. +|+| |+.+ .++-. .
T Consensus 43 ~~~~~~~~~f~~~d~iIfI~A~GIvVR~IAPll~dK~------------------~DPaVvvvDe~G~~vIpLLsGH~-G 103 (336)
T 3eeq_A 43 YKDAEIETIWKCYDAIVFVMALEGATRIVCKYAKSKT------------------EDPAIVCIDDKINYVIPLLGGHW-G 103 (336)
T ss_dssp GGGCCHHHHTTTCSEEEEESCHHHHHHHHHHHCCCTT------------------TCCEEEEECTTCCEEEEEECTTT-T
T ss_pred CHHHHHHHHhcCCCeEEEEeChHHHHHHhCchhccCC------------------CCCCEEEEeCCCCEEEEeccCch-h
Confidence 5677899999999999999987765444467777643 1222 2232 3332 34444 7
Q ss_pred HHHHHHHHHHHhcCh
Q 045076 121 TMEFAVALVEQLYRK 135 (145)
Q Consensus 121 ~~~~~l~li~~~~g~ 135 (145)
+.+++.+|-+.+.+.
T Consensus 104 AN~LA~~IA~~lga~ 118 (336)
T 3eeq_A 104 ANDIARELSVILNST 118 (336)
T ss_dssp HHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHhCCE
Confidence 888888888766554
No 120
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=27.35 E-value=98 Score=20.46 Aligned_cols=38 Identities=11% Similarity=-0.010 Sum_probs=30.9
Q ss_pred CCCccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcc
Q 045076 24 DAVFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCA 67 (145)
Q Consensus 24 ~~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~ 67 (145)
..+-|.++|..-. .+|+...+...+..++|..+.+|++
T Consensus 75 i~~~D~vii~S~S------g~n~~~ie~A~~ake~G~~vIaITs 112 (170)
T 3jx9_A 75 LHAVDRVLIFTPD------TERSDLLASLARYDAWHTPYSIITL 112 (170)
T ss_dssp CCTTCEEEEEESC------SCCHHHHHHHHHHHHHTCCEEEEES
T ss_pred CCCCCEEEEEeCC------CCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 3467888876532 3688999999999999999999998
No 121
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=27.34 E-value=61 Score=20.72 Aligned_cols=39 Identities=13% Similarity=-0.043 Sum_probs=22.9
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHH---HCCCeEEEEcchh
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQA---SNGRLYAAVCASP 69 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~---~~~~~v~aic~g~ 69 (145)
+||.|++... .. . ...|. ..|+.+.. -++++++.+++++
T Consensus 51 ~~d~ii~Gsp--ty-~-g~~p~-~~fl~~l~~~~l~gk~v~~fgs~g 92 (161)
T 3hly_A 51 SARGIVLGTP--PS-Q-PSEAV-ATALSTIFAAAHNKQAIGLFDSYG 92 (161)
T ss_dssp HCSEEEEECC--BS-S-CCHHH-HHHHHHHHHHCCTTSEEEEECCCC
T ss_pred hCCEEEEEcC--Cc-C-CchhH-HHHHHHHHhhhhCCCEEEEEEcCC
Confidence 5898888432 11 1 11222 55555543 3789999998854
No 122
>1ag9_A Flavodoxin; electron transport, reductive activation; HET: FMN BTB; 1.80A {Escherichia coli} SCOP: c.23.5.1 PDB: 1ahn_A*
Probab=27.34 E-value=68 Score=20.73 Aligned_cols=43 Identities=14% Similarity=0.117 Sum_probs=24.8
Q ss_pred CCccEEEEcCCccChhccccChHHHHHHHHHH---HCCCeEEEEcchh
Q 045076 25 AVFDLIALPVCMPDATNLKESKVLETIVKKQA---SNGRLYAAVCASP 69 (145)
Q Consensus 25 ~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~---~~~~~v~aic~g~ 69 (145)
.+||.||+... ....=.-++.+.+|+.... -+++.++.+|.|.
T Consensus 44 ~~~d~ii~g~p--t~~~G~~p~~~~~f~~~l~~~~l~gk~vavfg~g~ 89 (175)
T 1ag9_A 44 EAYDILLLGIP--TWYYGEAQCDWDDFFPTLEEIDFNGKLVALFGCGD 89 (175)
T ss_dssp HTCSEEEEECC--EETTTEECHHHHHHHHHHTTCCCTTCEEEEEEECC
T ss_pred hhCCEEEEEEe--ecCCCcChHHHHHHHhhhhhcccCCCEEEEEEECC
Confidence 37999988432 1111112345666666553 3578888888753
No 123
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=26.17 E-value=1.3e+02 Score=19.93 Aligned_cols=36 Identities=11% Similarity=0.035 Sum_probs=28.3
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcc
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCA 67 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~ 67 (145)
+-|++|+.... ...+.+++.++...++|..+.+|+.
T Consensus 114 ~~Dvvi~iS~S------G~t~~~~~~~~~ak~~g~~vi~iT~ 149 (201)
T 3trj_A 114 EDDILLVITTS------GDSENILSAVEEAHDLEMKVIALTG 149 (201)
T ss_dssp TTCEEEEECSS------SCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCEEEEEeCC------CCCHHHHHHHHHHHHCCCcEEEEEC
Confidence 56888776652 2577899999999999999999875
No 124
>2ane_A ATP-dependent protease LA; LONN119, LON protease, hydrolase; 2.03A {Escherichia coli} SCOP: b.122.1.10
Probab=25.74 E-value=45 Score=20.67 Aligned_cols=37 Identities=8% Similarity=0.086 Sum_probs=26.3
Q ss_pred cEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEc
Q 045076 28 DLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVC 66 (145)
Q Consensus 28 D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic 66 (145)
+.+++||.. -+- ....++.++.+++..++++.++.++
T Consensus 25 ~~vlfPg~~-~pL-~V~~~r~i~~v~~a~~~~~~i~lv~ 61 (125)
T 2ane_A 25 DVVVYPHMV-IPL-FVGREKSIRCLEAAMDHDKKIMLVA 61 (125)
T ss_dssp SCCCCTTCE-EEE-EECCHHHHHHHHHHHTTTSEEEEEE
T ss_pred CeeeCCCcc-EEE-EECCHHHHHHHHHHHhcCCEEEEEE
Confidence 677888874 222 2457888899999888788776554
No 125
>2l27_B Peptide agonist; CRF, ECD1, family B1, alpha helical CRF, membrane P peptide binding protein; NMR {Homo sapiens}
Probab=25.68 E-value=19 Score=17.66 Aligned_cols=22 Identities=14% Similarity=0.412 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHhcChhHHHHHh
Q 045076 121 TMEFAVALVEQLYRKGKADEVS 142 (145)
Q Consensus 121 ~~~~~l~li~~~~g~~~a~~va 142 (145)
++|+.+++++...--..+++.+
T Consensus 4 SlDLTFhlLR~m~emar~e~~~ 25 (38)
T 2l27_B 4 SLDLTFNLLREVLEIAKAEQEA 25 (38)
T ss_dssp CSHHHHHHHHHHHHHHHHGGGT
T ss_pred chhHHHHHHHHHHHHHHHHHHH
Confidence 5788999998877555554443
No 126
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=25.40 E-value=1.2e+02 Score=22.70 Aligned_cols=37 Identities=11% Similarity=0.143 Sum_probs=24.6
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEE
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAA 64 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~a 64 (145)
.++.||+-|- +.-++..++.+.+.|++..++|.+|..
T Consensus 253 g~~GiVle~~--G~Gn~p~~~~~~~~l~~a~~~Gi~VV~ 289 (358)
T 2him_A 253 PVKALILRSY--GVGNAPQNKAFLQELQEASDRGIVVVN 289 (358)
T ss_dssp SCSEEEEEEB--TTTBCCCCHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEecC--CCCCCCCcHHHHHHHHHHHHCCCEEEE
Confidence 5777877762 122233357899999998888876654
No 127
>2pd2_A Hypothetical protein ST0148; structural genomics, NPPSFA, national project on protein STR and functional analyses; 2.06A {Sulfolobus tokodaii}
Probab=25.30 E-value=1.1e+02 Score=17.91 Aligned_cols=48 Identities=10% Similarity=0.086 Sum_probs=33.2
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcchhHHHhhhccc
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCASPAVALGSWGL 78 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~g~~~~La~agl 78 (145)
+.|+-++.-| .+...+..+..+.+.++.+.++|. -...|. .+ +...|+
T Consensus 29 ~~~v~vv~~g-~gv~~~~~~~~~~~~i~~l~~~gV-~~~~C~-~s--~~~~gi 76 (108)
T 2pd2_A 29 DAEIEVVLHQ-SAIKALLKDSDTRSIIEDLIKKNI-LIVGCE-NS--IRSQNL 76 (108)
T ss_dssp TCEEEEEECG-GGGGGGBTTCTTHHHHHHHHHTTC-EEEEEH-HH--HHHTTC
T ss_pred CCeEEEEEcC-hHHHHHHcCchHHHHHHHHHHCcC-EEEecH-HH--HHHcCC
Confidence 5777777777 456666677788899988888765 777776 33 454443
No 128
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=25.19 E-value=70 Score=21.23 Aligned_cols=32 Identities=19% Similarity=0.179 Sum_probs=20.4
Q ss_pred CccEEEEcCCccC-hhc-------------cccChHHHHHHHHHHH
Q 045076 26 VFDLIALPVCMPD-ATN-------------LKESKVLETIVKKQAS 57 (145)
Q Consensus 26 ~~D~liipGG~~~-~~~-------------~~~~~~l~~~l~~~~~ 57 (145)
++|+||..||.+. .++ +..+++..+.|++++.
T Consensus 62 ~~DlVittGG~g~~~~D~T~ea~a~~~~~~l~~~~e~~~~i~~~~~ 107 (172)
T 3kbq_A 62 VSDLVVSSGGLGPTFDDMTVEGFAKCIGQDLRIDEDALAMIKKKYG 107 (172)
T ss_dssp HCSEEEEESCCSSSTTCCHHHHHHHHHTCCCEECHHHHHHHHHHHC
T ss_pred cCCEEEEcCCCcCCcccchHHHHHHHcCCCeeeCHHHHHHHHHHHc
Confidence 5899999999632 111 2235666777776664
No 129
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=24.75 E-value=1.1e+02 Score=20.41 Aligned_cols=36 Identities=8% Similarity=-0.046 Sum_probs=26.8
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcc
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCA 67 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~ 67 (145)
+-|++|+..-. ..++.+++.++.+.++|..+.+|+.
T Consensus 131 ~~DvvI~iS~S------G~t~~~i~~~~~ak~~G~~vIaIT~ 166 (212)
T 2i2w_A 131 EGDVLLGISTS------GNSANVIKAIAAAREKGMKVITLTG 166 (212)
T ss_dssp TTCEEEEECSS------SCCHHHHHHHHHHHHHTCEEEEEEE
T ss_pred CCCEEEEEECC------CCCHHHHHHHHHHHHCCCeEEEEEC
Confidence 45777765542 2467888999998888988888876
No 130
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=24.49 E-value=1.4e+02 Score=19.09 Aligned_cols=36 Identities=25% Similarity=0.126 Sum_probs=27.4
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcc
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCA 67 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~ 67 (145)
+-|++|+.... ...+.+.+.++.+.++|..+.+|..
T Consensus 79 ~~d~vI~iS~s------G~t~~~~~~~~~ak~~g~~vi~IT~ 114 (186)
T 1m3s_A 79 EGDLVIIGSGS------GETKSLIHTAAKAKSLHGIVAALTI 114 (186)
T ss_dssp TTCEEEEECSS------SCCHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEEcCC------CCcHHHHHHHHHHHHCCCEEEEEEC
Confidence 55777776652 2457888999999999988888876
No 131
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=24.29 E-value=1.1e+02 Score=20.91 Aligned_cols=36 Identities=14% Similarity=0.055 Sum_probs=28.8
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcc
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCA 67 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~ 67 (145)
+-|++|+.... ..++.+++.++.+.++|..+.+|+.
T Consensus 108 ~~Dv~I~iS~S------G~t~~~i~~~~~Ak~~G~~vI~IT~ 143 (243)
T 3cvj_A 108 NKDVIMIISNS------GRNTVPVEMAIESRNIGAKVIAMTS 143 (243)
T ss_dssp TTCEEEEECSS------CCSHHHHHHHHHHHHHTCEEEEEEC
T ss_pred CCCEEEEEeCC------CCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 55888776652 2577899999999999999999987
No 132
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=22.96 E-value=1.4e+02 Score=19.11 Aligned_cols=36 Identities=8% Similarity=-0.015 Sum_probs=27.3
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcc
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCA 67 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~ 67 (145)
+-|++|+.... ...+.+.+.++.+.++|..+.+|+.
T Consensus 96 ~~d~vI~iS~s------G~t~~~~~~~~~ak~~g~~vi~IT~ 131 (183)
T 2xhz_A 96 PQDVVIAISNS------GESSEITALIPVLKRLHVPLICITG 131 (183)
T ss_dssp TTCEEEEECSS------SCCHHHHHHHHHHHTTTCCEEEEES
T ss_pred CCCEEEEEeCC------CCCHHHHHHHHHHHHCCCCEEEEEC
Confidence 55777776652 2567889999999988988888875
No 133
>1yob_A Flavodoxin 2, flavodoxin II; alpha-beta fold, non- covalently bound FMN, electron transport; HET: FMN; 2.25A {Azotobacter vinelandii} SCOP: c.23.5.1
Probab=22.74 E-value=68 Score=20.80 Aligned_cols=24 Identities=17% Similarity=0.131 Sum_probs=16.0
Q ss_pred hHHHHHHHHHH---HCCCeEEEEcchh
Q 045076 46 KVLETIVKKQA---SNGRLYAAVCASP 69 (145)
Q Consensus 46 ~~l~~~l~~~~---~~~~~v~aic~g~ 69 (145)
+.+.+|+.+.. -+++.++.+|+|.
T Consensus 72 ~~~~~fl~~l~~~~l~gk~~a~fg~g~ 98 (179)
T 1yob_A 72 ESWEEFLPKIEGLDFSGKTVALFGLGD 98 (179)
T ss_dssp CCHHHHHHHHTTCCCTTCEEEEEEECC
T ss_pred hHHHHHHHHhhhcccCCCEEEEEEECC
Confidence 34667776653 3578888888753
No 134
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=22.57 E-value=88 Score=20.92 Aligned_cols=40 Identities=25% Similarity=0.288 Sum_probs=24.3
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHHH------CCCeEEEEcch
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQAS------NGRLYAAVCAS 68 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~------~~~~v~aic~g 68 (145)
+.|+||+.- + .....-+..++.||.+... ++|+++.++++
T Consensus 73 ~AD~iVi~t--P-~Y~~s~p~~LK~~iD~~~~~~~~~l~gK~v~~v~ts 118 (199)
T 4hs4_A 73 TADAVVIVT--P-EYNYSVPGVLKNAIDWLSRVSPQPLAGKPVALVTAS 118 (199)
T ss_dssp HSSEEEEEE--C-CBTTBCCHHHHHHHHHHTTSSSCTTTTCEEEEEEEC
T ss_pred hCCEEEEEc--C-ccCCCcCHHHHHHHHHhcccCCcccCCCEEEEEEeC
Confidence 577777732 2 2233446677777777654 56777777663
No 135
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=22.53 E-value=1.5e+02 Score=21.68 Aligned_cols=41 Identities=2% Similarity=-0.124 Sum_probs=27.3
Q ss_pred CCccEEEEcCCccChhccccChHHHHHHHHHHH---CCCeEEEEcch
Q 045076 25 AVFDLIALPVCMPDATNLKESKVLETIVKKQAS---NGRLYAAVCAS 68 (145)
Q Consensus 25 ~~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~---~~~~v~aic~g 68 (145)
.+||.+++.....+ -...+.+.+|+.+... +++.++.+|+.
T Consensus 302 ~~~d~ii~gsp~~~---~~~~~~~~~~l~~l~~~~l~~k~~~~f~t~ 345 (402)
T 1e5d_A 302 SDAGAVIVGSPTHN---NGILPYVAGTLQYIKGLRPQNKIGGAFGSF 345 (402)
T ss_dssp HTCSEEEEECCCBT---TBCCHHHHHHHHHHHHTCCCSCEEEEEEEE
T ss_pred HHCCEEEEECCccC---CCchHHHHHHHHHhhhcccCCCEEEEEEcC
Confidence 37899998654211 1235568888887654 67888888874
No 136
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=22.44 E-value=21 Score=25.24 Aligned_cols=13 Identities=15% Similarity=0.189 Sum_probs=10.3
Q ss_pred CccEEEEcCCccC
Q 045076 26 VFDLIALPVCMPD 38 (145)
Q Consensus 26 ~~D~liipGG~~~ 38 (145)
+||++||-||.++
T Consensus 6 ~yDvvIIG~GpAG 18 (312)
T 4gcm_A 6 DFDIAIIGAGPAG 18 (312)
T ss_dssp SEEEEEECCSHHH
T ss_pred CCCEEEECCCHHH
Confidence 6999999888543
No 137
>2fcr_A Flavodoxin; electron transport; HET: FMN; 1.80A {Chondrus crispus} SCOP: c.23.5.1
Probab=22.26 E-value=41 Score=21.77 Aligned_cols=45 Identities=13% Similarity=0.037 Sum_probs=25.2
Q ss_pred CCccEEEEcCCccChhcccc--ChHHHHHH-HHHH---HCCCeEEEEcchh
Q 045076 25 AVFDLIALPVCMPDATNLKE--SKVLETIV-KKQA---SNGRLYAAVCASP 69 (145)
Q Consensus 25 ~~~D~liipGG~~~~~~~~~--~~~l~~~l-~~~~---~~~~~v~aic~g~ 69 (145)
.+||.|++.....+...+.. ++.+.+|+ .+.. -+++.++.+|+|.
T Consensus 44 ~~~d~ii~g~pt~~~G~~~~~~p~~~~~fl~~~l~~~~l~gk~~avfg~g~ 94 (173)
T 2fcr_A 44 KDYDLLFLGAPTWNTGADTERSGTSWDEFLYDKLPEVDMKDLPVAIFGLGD 94 (173)
T ss_dssp GGCSEEEEEEECCSTTCSSCCSCSTHHHHHHHTGGGCCCTTCEEEEEEEEC
T ss_pred ccCCEEEEEEeecCCCCcCccCcHHHHHHHHhhccccccCCCEEEEEEECC
Confidence 47999988432111011101 34677888 6442 3578888888753
No 138
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=21.12 E-value=86 Score=22.21 Aligned_cols=33 Identities=9% Similarity=-0.118 Sum_probs=21.4
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHHHCCCeEEEEcc
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQASNGRLYAAVCA 67 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~~~~~~v~aic~ 67 (145)
++|++|+.||- + .+++-++.+...+.++.+|-.
T Consensus 63 ~~D~vi~~GGD-G--------T~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 63 QADLAVVVGGD-G--------NMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HCSEEEECSCH-H--------HHHHHHHHHTTSSCEEEEBCS
T ss_pred CCCEEEEEcCc-H--------HHHHHHHHhhcCCCCEEEEEC
Confidence 58999999993 3 334444555555677777743
No 139
>1mwq_A Hypothetical protein HI0828; YCII_HAEIN, structural genomic structure 2 function project, S2F, unknown function; HET: MSE 1PE; 0.99A {Haemophilus influenzae} SCOP: d.58.4.7
Probab=21.11 E-value=1e+02 Score=17.96 Aligned_cols=20 Identities=20% Similarity=0.199 Sum_probs=17.0
Q ss_pred ChHHHHHHHHHHHCCCeEEE
Q 045076 45 SKVLETIVKKQASNGRLYAA 64 (145)
Q Consensus 45 ~~~l~~~l~~~~~~~~~v~a 64 (145)
-+...+|+++..++|+++++
T Consensus 24 ~~~H~~~l~~~~~~G~l~~~ 43 (101)
T 1mwq_A 24 REQHLARLKQLQAENRLLTA 43 (101)
T ss_dssp HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHhCCEEEEe
Confidence 46788999999999988765
No 140
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=21.04 E-value=74 Score=18.52 Aligned_cols=26 Identities=19% Similarity=0.322 Sum_probs=21.8
Q ss_pred ccChHHHHHHHHHHHCCCeEEEEcch
Q 045076 43 KESKVLETIVKKQASNGRLYAAVCAS 68 (145)
Q Consensus 43 ~~~~~l~~~l~~~~~~~~~v~aic~g 68 (145)
..++.+.++++.+..+|+++...-+|
T Consensus 35 tssqdirdiiksmkdngkplvvfvng 60 (112)
T 2lnd_A 35 TSSQDIRDIIKSMKDNGKPLVVFVNG 60 (112)
T ss_dssp CSHHHHHHHHHHHTTCCSCEEEEECS
T ss_pred cchhhHHHHHHHHHhcCCeEEEEecC
Confidence 35678889999999999999888775
No 141
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=20.75 E-value=1.6e+02 Score=18.13 Aligned_cols=45 Identities=7% Similarity=0.064 Sum_probs=22.6
Q ss_pred CCccEEEEcCCccChhcccc-ChHHHHHHHHH--HHCCCeEEEEcchh
Q 045076 25 AVFDLIALPVCMPDATNLKE-SKVLETIVKKQ--ASNGRLYAAVCASP 69 (145)
Q Consensus 25 ~~~D~liipGG~~~~~~~~~-~~~l~~~l~~~--~~~~~~v~aic~g~ 69 (145)
.++|.+++.....+...+.. -..+.++|+.. .-+++.++.++.|.
T Consensus 45 ~~~d~vi~g~pt~g~g~~p~~~~~f~~~l~~~~~~l~~~~~avfg~G~ 92 (147)
T 2hna_A 45 PASGIWLVISSTHGAGDIPDNLSPFYEALQEQKPDLSAVRFGAIGIGS 92 (147)
T ss_dssp CSEEEEEEECCTTTTCCTTSSCHHHHHHHHHHCCCTTEEEEEEESCCH
T ss_pred ccCCeEEEEECccCCCCCChhHHHHHHHHHhhccccCCCEEEEEeccc
Confidence 47898887443211111111 13444454443 23467777777754
No 142
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=20.68 E-value=1.3e+02 Score=18.46 Aligned_cols=40 Identities=15% Similarity=0.205 Sum_probs=25.1
Q ss_pred CccEEEEcCCccChhcc---ccChHHHHHHHHHHH---CCCeEEEEcch
Q 045076 26 VFDLIALPVCMPDATNL---KESKVLETIVKKQAS---NGRLYAAVCAS 68 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~---~~~~~l~~~l~~~~~---~~~~v~aic~g 68 (145)
++|.+++... .... .-++.+.+|+++... +++.++.++.|
T Consensus 49 ~~d~ii~g~p---ty~~~~G~~p~~~~~fl~~l~~~~l~~k~~~vfg~G 94 (148)
T 3f6r_A 49 GYDAVLFGCS---AWGMEDLEMQDDFLSLFEEFDRIGLAGRKVAAFASG 94 (148)
T ss_dssp TCSEEEEEEC---EECSSSCEECHHHHHHHTTGGGTCCTTCEEEEEEEE
T ss_pred cCCEEEEEec---ccCCCCCCCcHHHHHHHHHhhccCCCCCEEEEEEeC
Confidence 7898887432 1111 235577788877543 57888888775
No 143
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=20.42 E-value=58 Score=21.21 Aligned_cols=40 Identities=18% Similarity=0.248 Sum_probs=25.8
Q ss_pred CccEEEEcCCccChhccccChHHHHHHHHHH--HCCCeEEEEcch
Q 045076 26 VFDLIALPVCMPDATNLKESKVLETIVKKQA--SNGRLYAAVCAS 68 (145)
Q Consensus 26 ~~D~liipGG~~~~~~~~~~~~l~~~l~~~~--~~~~~v~aic~g 68 (145)
++|.||+.. + .....-+..+..||.+.. -++|+++.++.|
T Consensus 84 ~aD~iI~~s--P-~y~~~~p~~lK~~iD~~~~~l~gK~~~~~~~G 125 (191)
T 1t0i_A 84 ALDIIVFVT--P-QYNWGYPAALKNAIDRLYHEWHGKPALVVSYG 125 (191)
T ss_dssp TCSEEEEEE--E-CBTTBCCHHHHHHHHTCSTTTTTCEEEEEEEE
T ss_pred hCCEEEEEe--c-eECCCCCHHHHHHHHHHHhhcCCCEEEEEEeC
Confidence 688888832 2 222345678888888764 257777777664
No 144
>3p9z_A Uroporphyrinogen III cosynthase (HEMD); MCSG, PSI2, structural genomics, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.10A {Helicobacter pylori}
Probab=20.28 E-value=41 Score=23.01 Aligned_cols=52 Identities=15% Similarity=0.049 Sum_probs=29.8
Q ss_pred CCCccEEEEcCCccChhccccC-hHHHHHHHHHHHCCCeEEEEcchhHHHhhhcccc
Q 045076 24 DAVFDLIALPVCMPDATNLKES-KVLETIVKKQASNGRLYAAVCASPAVALGSWGLL 79 (145)
Q Consensus 24 ~~~~D~liipGG~~~~~~~~~~-~~l~~~l~~~~~~~~~v~aic~g~~~~La~agll 79 (145)
.++||.||+.... +.+.+... .... .++.. .+..+++++.+.+-.|.+.|+-
T Consensus 35 l~~~d~lifTS~n-aV~~~~~~l~~~~-~~~~l--~~~~i~aVG~~Ta~aL~~~G~~ 87 (229)
T 3p9z_A 35 PTPFNALIFTSKN-AVFSLLETLKNSP-KLKML--QNIPAYALSEPTAKTLQDHHFK 87 (229)
T ss_dssp CTTCSEEEESCHH-HHHHHHHHTTTCH-HHHHH--HTSCEEESSHHHHHHHHHTTCC
T ss_pred cCcCCEEEEECHH-HHHHHHHHHHhcc-chHHH--cCCcEEEECHHHHHHHHHcCCC
Confidence 4589999998863 33322110 0000 12222 3567899997766678877763
No 145
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=20.00 E-value=1.1e+02 Score=18.91 Aligned_cols=24 Identities=8% Similarity=-0.004 Sum_probs=20.3
Q ss_pred hHHHHHHHHHHHCCCeEEEEcchh
Q 045076 46 KVLETIVKKQASNGRLYAAVCASP 69 (145)
Q Consensus 46 ~~l~~~l~~~~~~~~~v~aic~g~ 69 (145)
+...+|+.+..++++.|..-|.+|
T Consensus 68 ~~~~~fi~~~~~~~~~VlVHC~~G 91 (145)
T 2nt2_A 68 NDTYKFISKAKKHGSKCLVHSKMG 91 (145)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred HHHHHHHHHHHHcCCeEEEECCCC
Confidence 467789988888899999999876
Done!