Query         045077
Match_columns 409
No_of_seqs    155 out of 1772
Neff          10.5
Searched_HMMs 46136
Date          Fri Mar 29 09:37:25 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045077.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045077hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 9.9E-71 2.1E-75  516.9  35.5  383    1-403    34-488 (489)
  2 KOG0158 Cytochrome P450 CYP3/C 100.0 1.4E-65 3.1E-70  475.1  33.1  391    1-403    39-499 (499)
  3 PLN00110 flavonoid 3',5'-hydro 100.0 2.6E-65 5.7E-70  493.1  35.9  394    1-408    39-502 (504)
  4 PLN03234 cytochrome P450 83B1; 100.0   1E-64 2.3E-69  490.9  36.0  390    1-402    36-498 (499)
  5 PLN02971 tryptophan N-hydroxyl 100.0 2.3E-64   5E-69  490.9  37.8  397    1-408    65-539 (543)
  6 PLN03112 cytochrome P450 famil 100.0 5.3E-64 1.1E-68  487.4  37.0  397    1-408    40-513 (514)
  7 PLN02687 flavonoid 3'-monooxyg 100.0 8.8E-64 1.9E-68  485.2  36.3  397    1-408    42-514 (517)
  8 PTZ00404 cytochrome P450; Prov 100.0 1.2E-63 2.6E-68  481.5  34.4  376    1-402    37-482 (482)
  9 PLN02183 ferulate 5-hydroxylas 100.0 2.4E-63 5.1E-68  482.0  35.9  393    1-407    44-515 (516)
 10 PLN00168 Cytochrome P450; Prov 100.0 8.4E-63 1.8E-67  478.6  37.2  396    1-404    43-518 (519)
 11 PLN02655 ent-kaurene oxidase   100.0 1.8E-62   4E-67  470.3  37.1  384    1-405     7-466 (466)
 12 PLN02966 cytochrome P450 83A1  100.0 2.1E-62 4.6E-67  474.2  37.3  388    1-402    37-499 (502)
 13 PLN02290 cytokinin trans-hydro 100.0 1.7E-62 3.7E-67  477.1  34.8  388    1-404    50-516 (516)
 14 PLN02394 trans-cinnamate 4-mon 100.0 2.2E-62 4.9E-67  475.0  35.6  389    1-403    38-502 (503)
 15 PF00067 p450:  Cytochrome P450 100.0 1.1E-62 2.5E-67  473.8  30.2  383    1-399     7-463 (463)
 16 PLN02738 carotene beta-ring hy 100.0 1.5E-61 3.2E-66  473.2  36.3  384    4-405   142-597 (633)
 17 KOG0157 Cytochrome P450 CYP4/C 100.0 1.6E-60 3.5E-65  456.4  31.3  385    1-404    43-497 (497)
 18 KOG0159 Cytochrome P450 CYP11/ 100.0 3.6E-60 7.7E-65  429.4  31.5  385    1-404    58-519 (519)
 19 PLN03018 homomethionine N-hydr 100.0 2.3E-59 5.1E-64  452.7  38.7  392    1-404    48-525 (534)
 20 PLN02936 epsilon-ring hydroxyl 100.0 1.1E-59 2.4E-64  453.1  34.0  389    1-406    20-485 (489)
 21 PLN02500 cytochrome P450 90B1  100.0 1.1E-59 2.5E-64  454.1  32.7  374    1-401    46-488 (490)
 22 PLN03195 fatty acid omega-hydr 100.0   3E-59 6.4E-64  454.1  32.3  385    1-403    38-516 (516)
 23 PLN02169 fatty acid (omega-1)- 100.0 5.9E-59 1.3E-63  448.1  33.5  386    1-403    39-500 (500)
 24 PLN03141 3-epi-6-deoxocathaste 100.0 4.8E-59 1.1E-63  445.3  31.2  371    1-403    15-450 (452)
 25 KOG0684 Cytochrome P450 [Secon 100.0 1.2E-58 2.5E-63  409.5  30.6  377    1-403    40-485 (486)
 26 PLN02774 brassinosteroid-6-oxi 100.0 8.6E-59 1.9E-63  444.6  30.5  365    1-401    39-462 (463)
 27 PLN02196 abscisic acid 8'-hydr 100.0 3.5E-58 7.5E-63  440.1  29.1  362    1-402    43-462 (463)
 28 PLN02302 ent-kaurenoic acid ox 100.0 7.3E-57 1.6E-61  436.0  33.4  375    1-404    50-489 (490)
 29 PLN02987 Cytochrome P450, fami 100.0 1.4E-55   3E-60  421.0  32.7  370    1-404    38-470 (472)
 30 PLN02426 cytochrome P450, fami 100.0 5.1E-55 1.1E-59  420.2  33.7  376    3-403    51-500 (502)
 31 PLN02648 allene oxide synthase 100.0 1.5E-47 3.3E-52  363.3  23.3  354    1-376    25-462 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 1.1E-45 2.4E-50  346.5  25.8  328   17-402    25-410 (411)
 33 PF12554 MOZART1:  Mitotic-spin  59.7      23 0.00051   21.8   3.8   43  208-250     5-47  (48)
 34 PF14459 Prok-E2_C:  Prokaryoti  46.7      10 0.00023   27.6   1.0   17  335-351   104-120 (131)
 35 PF05952 ComX:  Bacillus compet  45.8      22 0.00047   22.9   2.2   25  231-255     4-28  (57)
 36 PF09201 SRX:  SRX;  InterPro:   36.8      33 0.00072   26.5   2.4   22  347-368    19-40  (148)
 37 KOG3506 40S ribosomal protein   34.8      18 0.00039   22.8   0.6   10  339-348    12-21  (56)
 38 PF13893 RRM_5:  RNA recognitio  29.8 1.2E+02  0.0026   18.8   4.0   34   21-54      2-39  (56)
 39 PF13625 Helicase_C_3:  Helicas  29.6 1.3E+02  0.0029   23.0   4.9   41   14-56     74-114 (129)
 40 COG5598 Trimethylamine:corrino  28.9      85  0.0018   30.2   4.2   73  268-372    99-174 (526)
 41 PF13993 YccJ:  YccJ-like prote  28.3   1E+02  0.0022   20.0   3.1   32  219-250     8-40  (69)
 42 TIGR00589 ogt O-6-methylguanin  21.8 1.8E+02  0.0038   20.3   3.8   61  241-302     2-66  (80)
 43 PF08492 SRP72:  SRP72 RNA-bind  21.7      61  0.0013   21.1   1.3    9  318-326    44-52  (59)
 44 PF07849 DUF1641:  Protein of u  21.4 1.1E+02  0.0025   18.1   2.4   19  230-248    13-31  (42)
 45 COG0851 MinE Septum formation   20.6   2E+02  0.0043   20.4   3.8   18  239-256    35-52  (88)
 46 COG1707 ACT domain-containing   20.4 1.2E+02  0.0027   24.3   3.0   37   14-50    154-195 (218)
 47 PLN03134 glycine-rich RNA-bind  20.3 3.3E+02  0.0072   21.4   5.6   39   17-55     48-95  (144)
 48 PF14129 DUF4296:  Domain of un  20.1 3.2E+02   0.007   19.2   7.7   48  207-254    31-78  (87)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=9.9e-71  Score=516.94  Aligned_cols=383  Identities=41%  Similarity=0.722  Sum_probs=331.8

Q ss_pred             CCccccccccCCCCchhHHHHHHHHHhCCeEEEeeCCeeEEEecCHHHHHHHHHhCCCccCCc-----------------
Q 045077            1 MASDGHLHLLGGREPAHRVLDNMADKYGPIFTIRMGINRALVVSNWEIAKECLTTHDKVFANP-----------------   63 (409)
Q Consensus         1 ~P~~G~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~-----------------   63 (409)
                      +|+|||++++.. ..+|+.+.+|+++|||||++|+|..++|||+|++++++++.+++..|++|                 
T Consensus        34 lPiIGnl~~l~~-~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~~~~~~~~i  112 (489)
T KOG0156|consen   34 LPIIGNLHQLGS-LPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKYLSYGGKGI  112 (489)
T ss_pred             CCccccHHHcCC-CchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHHhcCCCCce
Confidence            699999999984 35999999999999999999999999999999999999999998888877                 


Q ss_pred             ----------------hhhhccHHHHHHhHHhHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHHHhhHHH-----H
Q 045077           64 ----------------TLELLSNHRLEKLKNVREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFADTTRSVL-----L  122 (409)
Q Consensus        64 ----------------~~~~fs~~~l~~~~~~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi-----G  122 (409)
                                      +...|+...+++......++++.+++.+.+.    ..+ +  +||+...+..++.++|     |
T Consensus       113 ~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~----~~~-~--~vdl~~~l~~~~~nvI~~~~fG  185 (489)
T KOG0156|consen  113 VFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKS----KKG-E--PVDLSELLDLLVGNVICRMLFG  185 (489)
T ss_pred             EeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhc----CCC-c--eeeHHHHHHHHHHHHHHHHHhC
Confidence                            5667778888888888889999999988762    133 4  8999999999999999     5


Q ss_pred             HHH------------------HHhhcccccccccc-cccccc-cCccHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhc
Q 045077          123 TRF------------------FEMSGKFVVSDALP-FLRWLD-IGCDERSMKKIARESDIVVQGWLEEHKRKRDSQEVKK  182 (409)
Q Consensus       123 ~~~------------------~~~~~~~~~~~~~p-~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  182 (409)
                      .++                  ......+...+++| ++.+++ ..+..+.......+++.++.+.|+++++.. ..   +
T Consensus       186 ~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~-~~---~  261 (489)
T KOG0156|consen  186 RRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI-GD---E  261 (489)
T ss_pred             CccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cc---C
Confidence            444                  33345566778888 677774 234566667777779999999999998865 21   1


Q ss_pred             CcchHHHHHHhhccCccccCCCch-hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhcCCCCCC
Q 045077          183 EEEDFMYVMLSILGDAEQYSGRDV-DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVGTKKQVN  261 (409)
Q Consensus       183 ~~~d~l~~ll~~~~~~~~~~~~~l-~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~  261 (409)
                      +..|++|.|++...+++   ...+ ++++...+.++++||+|||++|+.|++.+|++||++|+|+++||++++|.++.++
T Consensus       262 ~~~D~vD~lL~~~~~~~---~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v~  338 (489)
T KOG0156|consen  262 EGRDFVDALLKLMKEEK---AEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRLVS  338 (489)
T ss_pred             CCCcHHHHHHHhhcccc---cCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCC
Confidence            22899999999876541   1128 9999999999999999999999999999999999999999999999999888899


Q ss_pred             hhhcccChhHHHHHHHHhhcCCCCccccccccccceeeccee-------------ccCCCCCCCCCCCcccCcccCCCCC
Q 045077          262 ESDIKKLVYLQAILKEAMRLYPAVPLLVPHESIEECTVNGYH-------------LHRDPRAWEEPCKFQPKRFLTRHKD  328 (409)
Q Consensus       262 ~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~-------------~~~d~~~~~dp~~F~P~R~l~~~~~  328 (409)
                      .+|+.+||||+|||+|++|+||++|+.+||.+++|+.++||.             +||||++|+||++|+||||++++  
T Consensus       339 e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~--  416 (489)
T KOG0156|consen  339 ESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSN--  416 (489)
T ss_pred             hhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCc--
Confidence            999999999999999999999999999999999999999998             89999999999999999999984  


Q ss_pred             ccccCCCCccccCCCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCCCCCccccccceeccCCCeEEEEEecC
Q 045077          329 IDVKGQNFELLPFSSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNEPLDMEEGLGLTLEKSTPLEVLVAPRL  403 (409)
Q Consensus       329 ~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  403 (409)
                       +.+.....++|||.|+|+|+|..||++|+.++++.|+++|+++++++ ++++... +++...+.++.+...+|.
T Consensus       417 -d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~-~~d~~e~-~~~~~~~~pl~~~~~~r~  488 (489)
T KOG0156|consen  417 -DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG-KVDMEEA-GLTLKKKKPLKAVPVPRL  488 (489)
T ss_pred             -cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC-CCCCccc-ccceecCCcceeeeecCC
Confidence             22335678999999999999999999999999999999999999987 6677766 477777889999888875


No 2  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.4e-65  Score=475.08  Aligned_cols=391  Identities=26%  Similarity=0.374  Sum_probs=298.7

Q ss_pred             CCccccccccCCCCchhHHHHHHHHHhCCeEEEeeCCeeEEEecCHHHHHHHHHhCCCccCC--c---------------
Q 045077            1 MASDGHLHLLGGREPAHRVLDNMADKYGPIFTIRMGINRALVVSNWEIAKECLTTHDKVFAN--P---------------   63 (409)
Q Consensus         1 ~P~~G~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~d~~~~~~vl~~~~~~~~~--~---------------   63 (409)
                      .|++||+..+...+.+.....+...++|+++.++.+.++.++|+||+.+++|+.++.+.|++  +               
T Consensus        39 ~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~~~~l~~~~L  118 (499)
T KOG0158|consen   39 LPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDPEDPLSALNL  118 (499)
T ss_pred             CCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCCCCcccccCc
Confidence            48999999986423235555555555599999999999999999999999999998888887  2               


Q ss_pred             --------------hhhhccHHHHHHhHHhHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHHHhhHHH-----HHH
Q 045077           64 --------------TLELLSNHRLEKLKNVREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFADTTRSVL-----LTR  124 (409)
Q Consensus        64 --------------~~~~fs~~~l~~~~~~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi-----G~~  124 (409)
                                    ++|.|++.+++.+-+.+++.++++++.+.+.   ...+ .  .+++.+.+..++.|||     |.+
T Consensus       119 f~~~g~~WK~lR~~lsP~Fts~kmk~m~~t~~~~~~~l~~~l~~~---~~~~-~--~~~~~dl~~~yT~DVI~~~AfG~~  192 (499)
T KOG0158|consen  119 FFLRGERWKRLRTKLSPTFTSGKLKKMFPTMEEVGDELVRHLRRK---SEGG-Q--EGEIKDLCARYTTDVIGSCAFGLD  192 (499)
T ss_pred             hhccCchHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHHHHHh---hccc-C--CccHHHHHHHHHHHHHhHhhcccc
Confidence                          8999999999999999999999999999997   4433 3  6688888889999999     332


Q ss_pred             HHHhh---------c--cccc-ccccccccc--cccCccHH--HHHHHHHHHHHHHHHHHHHHHhhhchhhhhcCcchHH
Q 045077          125 FFEMS---------G--KFVV-SDALPFLRW--LDIGCDER--SMKKIARESDIVVQGWLEEHKRKRDSQEVKKEEEDFM  188 (409)
Q Consensus       125 ~~~~~---------~--~~~~-~~~~p~l~~--l~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l  188 (409)
                      .....         .  .+.. ...+|+...  +..+....  +.........+++.+.+..+.+.+..  .+..+.|++
T Consensus       193 ~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l~~~~~~~~~~~~~~~~v~~~v~~R~~--~~~~r~Dfi  270 (499)
T KOG0158|consen  193 ANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPLRVKLFPEDVTDFFRKLVNSRVEQREK--ENIERNDFI  270 (499)
T ss_pred             hhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhhhcccChHHHHHHHHHHHHHHHHHHHh--cCCCCchHH
Confidence            21000         0  0000 111111000  00000000  11112233344444444444433211  124678999


Q ss_pred             HHHHhhccCc-cccCCC-ch-hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhcCCCCCChhhc
Q 045077          189 YVMLSILGDA-EQYSGR-DV-DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVGTKKQVNESDI  265 (409)
Q Consensus       189 ~~ll~~~~~~-~~~~~~-~l-~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~  265 (409)
                      +.+++.+.+. ++.... .+ .++++++|+.|++||.||||++|++++|+||+||++|+|||+||++++.+...+|++.+
T Consensus       271 ~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l  350 (499)
T KOG0158|consen  271 DLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKEGLTYDSL  350 (499)
T ss_pred             HHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccCCCCHHHH
Confidence            9999987531 111111 47 99999999999999999999999999999999999999999999999776555999999


Q ss_pred             ccChhHHHHHHHHhhcCCCCccccccccccceeec-cee-------------ccCCCCCCCCCCCcccCcccCCCCCccc
Q 045077          266 KKLVYLQAILKEAMRLYPAVPLLVPHESIEECTVN-GYH-------------LHRDPRAWEEPCKFQPKRFLTRHKDIDV  331 (409)
Q Consensus       266 ~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~-g~~-------------~~~d~~~~~dp~~F~P~R~l~~~~~~~~  331 (409)
                      ++|+||++||+||||+||++|.. .|.+++|+++. ++.             +||||++||||++|+||||.+++.+   
T Consensus       351 ~~L~YLd~Vi~ETLR~yP~~~~~-~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~---  426 (499)
T KOG0158|consen  351 SKLKYLDMVIKETLRLYPPAPFL-NRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEEENNK---  426 (499)
T ss_pred             hCCcHHHHHHHHHHhhCCCcccc-cceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCCCCccc---
Confidence            99999999999999999999995 89999999999 766             8999999999999999999987632   


Q ss_pred             cCCCCccccCCCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCCCCCccc-cccceeccCCCeEEEEEecC
Q 045077          332 KGQNFELLPFSSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNEPLDMEE-GLGLTLEKSTPLEVLVAPRL  403 (409)
Q Consensus       332 ~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~r~  403 (409)
                      ..++..|+|||.|||+|+|++||.+|+|+.|++||++|+++.++....+... ..+.+..|+.++++++.+|.
T Consensus       427 ~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~~~~~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  427 SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTIIPLEGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcccCcccCCccceeeecCCceEEEEEeCC
Confidence            3478899999999999999999999999999999999999998832222211 22567788899999999984


No 3  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=2.6e-65  Score=493.10  Aligned_cols=394  Identities=35%  Similarity=0.637  Sum_probs=316.8

Q ss_pred             CCccccccccCCCCchhHHHHHHHHHhCCeEEEeeCCeeEEEecCHHHHHHHHHhCCCccCCc-----------------
Q 045077            1 MASDGHLHLLGGREPAHRVLDNMADKYGPIFTIRMGINRALVVSNWEIAKECLTTHDKVFANP-----------------   63 (409)
Q Consensus         1 ~P~~G~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~-----------------   63 (409)
                      +|++||++.+.  .+++.++.+|+++||+||++++|+.++|+|+||+++++++.++...|+.+                 
T Consensus        39 ~Pl~G~l~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~l  116 (504)
T PLN00110         39 WPLLGALPLLG--NMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGATHLAYGAQDMV  116 (504)
T ss_pred             CCeeechhhcC--CchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccchhhhccCCCcee
Confidence            58999998886  56899999999999999999999999999999999999998754333322                 


Q ss_pred             --------------hh-hhccHHHHHHhHHhHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHHHhhHHH-----HH
Q 045077           64 --------------TL-ELLSNHRLEKLKNVREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFADTTRSVL-----LT  123 (409)
Q Consensus        64 --------------~~-~~fs~~~l~~~~~~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi-----G~  123 (409)
                                    +. +.|+.++++.+.+.+.++++.+++.+.+.   ..+| +  ++|+.+++..++.+++     |.
T Consensus       117 ~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~---~~~g-~--~~~~~~~~~~~~~~vi~~~~fg~  190 (504)
T PLN00110        117 FADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLEL---SQRG-E--PVVVPEMLTFSMANMIGQVILSR  190 (504)
T ss_pred             eCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHh---ccCC-C--cEeHHHHHHHHHHHHHHHHHhCC
Confidence                          33 47888899999999999999999998775   4455 5  8899999999999988     32


Q ss_pred             HH-----------HH-------hhcccccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhcCcc
Q 045077          124 RF-----------FE-------MSGKFVVSDALPFLRWLDIGCDERSMKKIARESDIVVQGWLEEHKRKRDSQEVKKEEE  185 (409)
Q Consensus       124 ~~-----------~~-------~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  185 (409)
                      ++           ..       ......+.+.+|++.+++.....+...+..+.+..++.+.++++++.....   ....
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~  267 (504)
T PLN00110        191 RVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAHER---KGNP  267 (504)
T ss_pred             cccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcccc---ccCC
Confidence            21           00       011112234556555543222335555667778888888888776543221   2346


Q ss_pred             hHHHHHHhhccCccccCCCch-hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhcCCCCCChhh
Q 045077          186 DFMYVMLSILGDAEQYSGRDV-DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVGTKKQVNESD  264 (409)
Q Consensus       186 d~l~~ll~~~~~~~~~~~~~l-~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~  264 (409)
                      |+++.+++.....   .+..+ ++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++++.++.+++++
T Consensus       268 d~l~~ll~~~~~~---~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~  344 (504)
T PLN00110        268 DFLDVVMANQENS---TGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLVESD  344 (504)
T ss_pred             ChhhHHhhccccc---CCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHH
Confidence            8999999754322   23357 8999999999999999999999999999999999999999999999998777789999


Q ss_pred             cccChhHHHHHHHHhhcCCCCccccccccccceeeccee-------------ccCCCCCCCCCCCcccCcccCCCCCc-c
Q 045077          265 IKKLVYLQAILKEAMRLYPAVPLLVPHESIEECTVNGYH-------------LHRDPRAWEEPCKFQPKRFLTRHKDI-D  330 (409)
Q Consensus       265 ~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~-------------~~~d~~~~~dp~~F~P~R~l~~~~~~-~  330 (409)
                      +++|||++|||+|++|++|++++.++|.+.+|++++||.             +||||++|+||++|+||||+++.... .
T Consensus       345 ~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~  424 (504)
T PLN00110        345 LPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKID  424 (504)
T ss_pred             hhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCcccc
Confidence            999999999999999999999987799999999999987             89999999999999999999754211 1


Q ss_pred             ccCCCCccccCCCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCCCCCccccccceeccCCCeEEEEEecCCCCCC
Q 045077          331 VKGQNFELLPFSSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNEPLDMEEGLGLTLEKSTPLEVLVAPRLSASLY  408 (409)
Q Consensus       331 ~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~~~~  408 (409)
                      .+.....++|||+|+|.|+|++||++|+++++++|+++|++++.++.+.++....++++.++.++++++++|...+.|
T Consensus       425 ~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~  502 (504)
T PLN00110        425 PRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFGLALQKAVPLSAMVTPRLHQSAY  502 (504)
T ss_pred             cCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCcccccccccccCCCceEeeccCCCchhc
Confidence            111235799999999999999999999999999999999999987655444445677887888999999999888777


No 4  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=1e-64  Score=490.88  Aligned_cols=390  Identities=32%  Similarity=0.598  Sum_probs=313.2

Q ss_pred             CCccccccccCCCCchhHHHHHHHHHhCCeEEEeeCCeeEEEecCHHHHHHHHHhCCCccCCc-----------------
Q 045077            1 MASDGHLHLLGGREPAHRVLDNMADKYGPIFTIRMGINRALVVSNWEIAKECLTTHDKVFANP-----------------   63 (409)
Q Consensus         1 ~P~~G~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~-----------------   63 (409)
                      +|++||++++.+ .+++.++.+|+++||++|++++|+.++|+++||+++++++.++...|..+                 
T Consensus        36 ~P~iG~~~~~~~-~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~~~  114 (499)
T PLN03234         36 LPIIGNLHQMEK-FNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRELG  114 (499)
T ss_pred             CCeeccHHhcCC-CCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhhhhccCCCccc
Confidence            599999999863 46788999999999999999999999999999999999998765433221                 


Q ss_pred             ---------------hhhhccHHHHHHhHHhHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHHHhhHHH-----HH
Q 045077           64 ---------------TLELLSNHRLEKLKNVREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFADTTRSVL-----LT  123 (409)
Q Consensus        64 ---------------~~~~fs~~~l~~~~~~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi-----G~  123 (409)
                                     +.+.|+++++..+.+.+++.++++++.|.+.   .+++ +  ++|+.+.+..++++++     |.
T Consensus       115 ~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~---~~~~-~--~vd~~~~~~~~t~dvi~~~~fG~  188 (499)
T PLN03234        115 FGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKA---ADQS-G--TVDLSELLLSFTNCVVCRQAFGK  188 (499)
T ss_pred             cCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHh---ccCC-C--eEEHHHHHHHHHHHHHHHHHhCC
Confidence                           3578999999999999999999999999765   4444 4  8999999999999999     32


Q ss_pred             HH----------HHhh-------cccccccccccccccc-cCccHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhcCcc
Q 045077          124 RF----------FEMS-------GKFVVSDALPFLRWLD-IGCDERSMKKIARESDIVVQGWLEEHKRKRDSQEVKKEEE  185 (409)
Q Consensus       124 ~~----------~~~~-------~~~~~~~~~p~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  185 (409)
                      ++          ....       ........+|++..++ +.+..++..++.+.+.+++.+.++++++....+   ....
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~  265 (499)
T PLN03234        189 RYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRPK---QETE  265 (499)
T ss_pred             cccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccC---CCcc
Confidence            22          1100       0111223344443331 122245667788888999999998876543221   2356


Q ss_pred             hHHHHHHhhccCccccCCCch-hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhcCCCCCChhh
Q 045077          186 DFMYVMLSILGDAEQYSGRDV-DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVGTKKQVNESD  264 (409)
Q Consensus       186 d~l~~ll~~~~~~~~~~~~~l-~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~  264 (409)
                      |+++.|++...++ + .+..+ ++++.+++.++++||+|||+++++|++++|++||++|+|+++|+++++++.+.+++++
T Consensus       266 d~l~~l~~~~~~~-~-~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~  343 (499)
T PLN03234        266 SFIDLLMQIYKDQ-P-FSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEED  343 (499)
T ss_pred             cHHHHHHHHhhcc-C-cCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHH
Confidence            8999998765332 1 12246 9999999999999999999999999999999999999999999999998777789999


Q ss_pred             cccChhHHHHHHHHhhcCCCCccccccccccceeeccee-------------ccCCCCCC-CCCCCcccCcccCCCCCcc
Q 045077          265 IKKLVYLQAILKEAMRLYPAVPLLVPHESIEECTVNGYH-------------LHRDPRAW-EEPCKFQPKRFLTRHKDID  330 (409)
Q Consensus       265 ~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~-------------~~~d~~~~-~dp~~F~P~R~l~~~~~~~  330 (409)
                      +++|||++|||+|++|++|++++..+|.+.+|++++||.             +||||++| +||++|+||||+++++...
T Consensus       344 l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~  423 (499)
T PLN03234        344 IPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGVD  423 (499)
T ss_pred             HhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCCcC
Confidence            999999999999999999999997689999999999988             89999999 8999999999997653222


Q ss_pred             ccCCCCccccCCCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCC-C--CCccccccceeccCCCeEEEEEec
Q 045077          331 VKGQNFELLPFSSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNE-P--LDMEEGLGLTLEKSTPLEVLVAPR  402 (409)
Q Consensus       331 ~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~-~--~~~~~~~~~~~~~~~~~~v~~~~r  402 (409)
                      .+..+..++|||+|+|+|+|+++|++|++++++.|+++|++++.++. +  +......+++..+++.+.+..++|
T Consensus       424 ~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        424 FKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKH  498 (499)
T ss_pred             cCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEeecC
Confidence            23356789999999999999999999999999999999999998762 2  233345677777888888888776


No 5  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=2.3e-64  Score=490.87  Aligned_cols=397  Identities=28%  Similarity=0.476  Sum_probs=309.6

Q ss_pred             CCccccccccCCCCchhHHHHHHHHHhC-CeEEEeeCCeeEEEecCHHHHHHHHHhCCCccCCc----------------
Q 045077            1 MASDGHLHLLGGREPAHRVLDNMADKYG-PIFTIRMGINRALVVSNWEIAKECLTTHDKVFANP----------------   63 (409)
Q Consensus         1 ~P~~G~~~~~~~~~~~~~~~~~~~~~yG-~v~~i~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~----------------   63 (409)
                      +|++||++++...+..+.++.+|+++|| +||++++|+.++|+|+||+++++++.+++..|+++                
T Consensus        65 lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~~~~l~~~~~~~  144 (543)
T PLN02971         65 FPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSNGYKTC  144 (543)
T ss_pred             CCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccchhhccCCCCce
Confidence            5899999988531235788999999999 89999999999999999999999998876554443                


Q ss_pred             ---------------h-hhhccHHHHHHhHHhHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHHHhhHHH-----H
Q 045077           64 ---------------T-LELLSNHRLEKLKNVREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFADTTRSVL-----L  122 (409)
Q Consensus        64 ---------------~-~~~fs~~~l~~~~~~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi-----G  122 (409)
                                     + ...+++..+..+.+.++++++.+++.+.+.   ..+| +  ++|+.+.+..++++++     |
T Consensus       145 l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~-~--~vd~~~~~~~~t~~vi~~~~fG  218 (543)
T PLN02971        145 VITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNM---VKNS-E--PVDLRFVTRHYCGNAIKRLMFG  218 (543)
T ss_pred             EecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHh---ccCC-C--ceehHHHHHHHHHHHHHHHHhC
Confidence                           2 234445555567777778888887777654   3345 4  7999999999999999     5


Q ss_pred             HHHH-------------------Hhhcc------cccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHhhhch
Q 045077          123 TRFF-------------------EMSGK------FVVSDALPFLRWLDIGCDERSMKKIARESDIVVQGWLEEHKRKRDS  177 (409)
Q Consensus       123 ~~~~-------------------~~~~~------~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  177 (409)
                      .++.                   .....      ....+++|++.+++..+..+...+..+.+.+++.+.++++++..+.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  298 (543)
T PLN02971        219 TRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERIKMWRE  298 (543)
T ss_pred             CcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            3210                   00000      0122344554444222223445556677888888888887654332


Q ss_pred             hhhhcCcchHHHHHHhhccCccccCCCch-hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhcC
Q 045077          178 QEVKKEEEDFMYVMLSILGDAEQYSGRDV-DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVGT  256 (409)
Q Consensus       178 ~~~~~~~~d~l~~ll~~~~~~~~~~~~~l-~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~  256 (409)
                      +. .....|+++.|++...++   ....+ ++++++++.++++||+|||+++++|++++|++||++|+|+++||+++++.
T Consensus       299 ~~-~~~~~d~l~~ll~~~~~~---~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g~  374 (543)
T PLN02971        299 GK-RTQIEDFLDIFISIKDEA---GQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGK  374 (543)
T ss_pred             cC-CCCCcCHHHHHHhhhccc---CCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC
Confidence            11 112469999999864322   11137 89999999999999999999999999999999999999999999999998


Q ss_pred             CCCCChhhcccChhHHHHHHHHhhcCCCCccccccccccceeeccee-------------ccCCCCCCCCCCCcccCccc
Q 045077          257 KKQVNESDIKKLVYLQAILKEAMRLYPAVPLLVPHESIEECTVNGYH-------------LHRDPRAWEEPCKFQPKRFL  323 (409)
Q Consensus       257 ~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~-------------~~~d~~~~~dp~~F~P~R~l  323 (409)
                      ++.++++++++|||++|||+|+||++|++|+.++|.+.+|++++||.             +||||++|+||++|+||||+
T Consensus       375 ~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRfl  454 (543)
T PLN02971        375 ERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHL  454 (543)
T ss_pred             CCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccCcccCC
Confidence            78899999999999999999999999999997799999999999988             89999999999999999999


Q ss_pred             CCCCCccccCCCCccccCCCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCC-CCCccccccceeccCCCeEEEEEec
Q 045077          324 TRHKDIDVKGQNFELLPFSSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNE-PLDMEEGLGLTLEKSTPLEVLVAPR  402 (409)
Q Consensus       324 ~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~r  402 (409)
                      ++.++......+..++|||+|+|+|+|++||++|+++++++|+++|++++++++ ++++....+ ++..++++.+.+.+|
T Consensus       455 ~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  533 (543)
T PLN02971        455 NECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSH-DMFLSKPLVMVGELR  533 (543)
T ss_pred             CCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcC-cccccccceeeeeec
Confidence            754221111245679999999999999999999999999999999999988754 566666656 664557999999999


Q ss_pred             CCCCCC
Q 045077          403 LSASLY  408 (409)
Q Consensus       403 ~~~~~~  408 (409)
                      ...++|
T Consensus       534 ~~~~~~  539 (543)
T PLN02971        534 LSEDLY  539 (543)
T ss_pred             CCcccc
Confidence            777776


No 6  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=5.3e-64  Score=487.39  Aligned_cols=397  Identities=33%  Similarity=0.603  Sum_probs=317.4

Q ss_pred             CCccccccccCCCCchhHHHHHHHHHhCCeEEEeeCCeeEEEecCHHHHHHHHHhCCCccCCc-----------------
Q 045077            1 MASDGHLHLLGGREPAHRVLDNMADKYGPIFTIRMGINRALVVSNWEIAKECLTTHDKVFANP-----------------   63 (409)
Q Consensus         1 ~P~~G~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~-----------------   63 (409)
                      +|++||++++.  .+++.++.+|+++||++|++++|+.++|+++||+++++++.++...|+++                 
T Consensus        40 ~pl~G~~~~~~--~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~~~~~~~~g~~~~~  117 (514)
T PLN03112         40 WPIVGNLLQLG--PLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLAAVHLAYGCGDVA  117 (514)
T ss_pred             CCeeeeHHhcC--CchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCcccceeeccCCCceE
Confidence            59999999887  67899999999999999999999999999999999999997665444332                 


Q ss_pred             ---------------hhhhccHHHHHHhHHhHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHHHhhHHH-----HH
Q 045077           64 ---------------TLELLSNHRLEKLKNVREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFADTTRSVL-----LT  123 (409)
Q Consensus        64 ---------------~~~~fs~~~l~~~~~~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi-----G~  123 (409)
                                     ..+.|+.++++.+.+.+.+.++.+++.+.+.   ..+| +  ++|+.+.+..++++++     |.
T Consensus       118 ~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~---~~~~-~--~vd~~~~~~~~~~~vi~~~~fG~  191 (514)
T PLN03112        118 LAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEA---AQTG-K--PVNLREVLGAFSMNNVTRMLLGK  191 (514)
T ss_pred             eCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHh---hccC-C--eeeHHHHHHHHHHHHHHHHHcCC
Confidence                           2357899999999999999999999988765   3345 5  7999999999999998     43


Q ss_pred             HHH--------------Hh-------hcccccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhc
Q 045077          124 RFF--------------EM-------SGKFVVSDALPFLRWLDIGCDERSMKKIARESDIVVQGWLEEHKRKRDSQEVKK  182 (409)
Q Consensus       124 ~~~--------------~~-------~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  182 (409)
                      ++.              ..       ........++|++++++.....++..+..+.+.+++...++++++..+......
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  271 (514)
T PLN03112        192 QYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHRRARSGKLPGG  271 (514)
T ss_pred             ccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCC
Confidence            220              00       001112234565554422233456667778888888888888776432211012


Q ss_pred             CcchHHHHHHhhccCccccCCCch-hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhcCCCCCC
Q 045077          183 EEEDFMYVMLSILGDAEQYSGRDV-DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVGTKKQVN  261 (409)
Q Consensus       183 ~~~d~l~~ll~~~~~~~~~~~~~l-~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~  261 (409)
                      ...|+++.++++..++   .+..+ ++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++.++.++
T Consensus       272 ~~~d~l~~ll~~~~~~---~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t  348 (514)
T PLN03112        272 KDMDFVDVLLSLPGEN---GKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQ  348 (514)
T ss_pred             ccchHHHHHHHhhccc---cccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCCCcCC
Confidence            3469999999864332   12246 8999999999999999999999999999999999999999999999998777799


Q ss_pred             hhhcccChhHHHHHHHHhhcCCCCccccccccccceeeccee-------------ccCCCCCCCCCCCcccCcccCCCCC
Q 045077          262 ESDIKKLVYLQAILKEAMRLYPAVPLLVPHESIEECTVNGYH-------------LHRDPRAWEEPCKFQPKRFLTRHKD  328 (409)
Q Consensus       262 ~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~-------------~~~d~~~~~dp~~F~P~R~l~~~~~  328 (409)
                      ++++++|||++|||+|++|++|++++.++|.+.+|++++||.             +||||++|+||++|+||||+.+.++
T Consensus       349 ~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~  428 (514)
T PLN03112        349 ESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGS  428 (514)
T ss_pred             hhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCC
Confidence            999999999999999999999999987789999999999987             8999999999999999998764321


Q ss_pred             c-cc-cCCCCccccCCCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCC---CCCccccccceeccCCCeEEEEEecC
Q 045077          329 I-DV-KGQNFELLPFSSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNE---PLDMEEGLGLTLEKSTPLEVLVAPRL  403 (409)
Q Consensus       329 ~-~~-~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~r~  403 (409)
                      . .. ...+..++|||+|+|+|+|++||++|++++++.||++|++++.++.   ++......+++++++.+++++++||.
T Consensus       429 ~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  508 (514)
T PLN03112        429 RVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVATPRL  508 (514)
T ss_pred             ccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCcccccCCCeEEEeecCC
Confidence            1 11 1234579999999999999999999999999999999999987652   23333345677777789999999999


Q ss_pred             CCCCC
Q 045077          404 SASLY  408 (409)
Q Consensus       404 ~~~~~  408 (409)
                      ..++|
T Consensus       509 ~~~~~  513 (514)
T PLN03112        509 APHLY  513 (514)
T ss_pred             ccccc
Confidence            88887


No 7  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=8.8e-64  Score=485.19  Aligned_cols=397  Identities=40%  Similarity=0.697  Sum_probs=315.6

Q ss_pred             CCccccccccCCCCchhHHHHHHHHHhCCeEEEeeCCeeEEEecCHHHHHHHHHhCCCccCCc-----------------
Q 045077            1 MASDGHLHLLGGREPAHRVLDNMADKYGPIFTIRMGINRALVVSNWEIAKECLTTHDKVFANP-----------------   63 (409)
Q Consensus         1 ~P~~G~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~-----------------   63 (409)
                      +|++||++++.  .+++..+.+|+++||++|++++|+.++|+++||+++++++.++...|+.+                 
T Consensus        42 ~P~iG~~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~~l  119 (517)
T PLN02687         42 WPVLGNLPQLG--PKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEHMAYNYQDLV  119 (517)
T ss_pred             CCccccHHhcC--CchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhhhccCCceeE
Confidence            59999999887  56899999999999999999999999999999999999998654333321                 


Q ss_pred             --------------hh-hhccHHHHHHhHHhHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHHHhhHHH-----HH
Q 045077           64 --------------TL-ELLSNHRLEKLKNVREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFADTTRSVL-----LT  123 (409)
Q Consensus        64 --------------~~-~~fs~~~l~~~~~~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi-----G~  123 (409)
                                    +. +.|+.++++.+.+.++++++++++.|.+.   . ++ +  ++|+.+++..+++|++     |.
T Consensus       120 ~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~---~-~~-~--~vd~~~~~~~~t~dvi~~~~fG~  192 (517)
T PLN02687        120 FAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQ---H-GT-A--PVNLGQLVNVCTTNALGRAMVGR  192 (517)
T ss_pred             eCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHh---c-CC-C--ceeHHHHHHHHHHHHHHHHHhCc
Confidence                          44 78999999999999999999999999764   3 34 4  8999999999999998     33


Q ss_pred             HHH------------Hh-------hcccccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhcCc
Q 045077          124 RFF------------EM-------SGKFVVSDALPFLRWLDIGCDERSMKKIARESDIVVQGWLEEHKRKRDSQEVKKEE  184 (409)
Q Consensus       124 ~~~------------~~-------~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  184 (409)
                      ++.            ..       ........++|++.+++.....++..+..+.+.+++.+.++++++....+  ++..
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~--~~~~  270 (517)
T PLN02687        193 RVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTG--SEEH  270 (517)
T ss_pred             cccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--Cccc
Confidence            320            00       01111224556555553222345566677788888899998887653221  1235


Q ss_pred             chHHHHHHhhccCcc-ccCCCch-hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhcCCCCCCh
Q 045077          185 EDFMYVMLSILGDAE-QYSGRDV-DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVGTKKQVNE  262 (409)
Q Consensus       185 ~d~l~~ll~~~~~~~-~~~~~~l-~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~  262 (409)
                      .|+++.+++...+++ ...+..+ ++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++++.++.++.
T Consensus       271 ~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~  350 (517)
T PLN02687        271 KDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRDRLVSE  350 (517)
T ss_pred             ccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCH
Confidence            699999998654310 0012357 89999999999999999999999999999999999999999999999987778999


Q ss_pred             hhcccChhHHHHHHHHhhcCCCCccccccccccceeeccee-------------ccCCCCCCCCCCCcccCcccCCCCCc
Q 045077          263 SDIKKLVYLQAILKEAMRLYPAVPLLVPHESIEECTVNGYH-------------LHRDPRAWEEPCKFQPKRFLTRHKDI  329 (409)
Q Consensus       263 ~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~-------------~~~d~~~~~dp~~F~P~R~l~~~~~~  329 (409)
                      +++++||||+|||+|+||++|+++..++|.+.+|++++||.             +||||++|+||++|+||||+++....
T Consensus       351 ~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~  430 (517)
T PLN02687        351 SDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHA  430 (517)
T ss_pred             HHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCCcc
Confidence            99999999999999999999999987799999999999988             89999999999999999999754211


Q ss_pred             --cccCCCCccccCCCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCCC---CCccccccceeccCCCeEEEEEecCC
Q 045077          330 --DVKGQNFELLPFSSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNEP---LDMEEGLGLTLEKSTPLEVLVAPRLS  404 (409)
Q Consensus       330 --~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~r~~  404 (409)
                        .....+..++|||+|+|+|+|++||++|+++++++||++|++++.++..   +++....++++.+..++++++++|.-
T Consensus       431 ~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~  510 (517)
T PLN02687        431 GVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPRPRLL  510 (517)
T ss_pred             ccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEeeccCCC
Confidence              1112355799999999999999999999999999999999999987632   23333455666667789999999963


Q ss_pred             CCCC
Q 045077          405 ASLY  408 (409)
Q Consensus       405 ~~~~  408 (409)
                      .+-|
T Consensus       511 ~~~~  514 (517)
T PLN02687        511 PSAY  514 (517)
T ss_pred             hhhc
Confidence            4443


No 8  
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=1.2e-63  Score=481.48  Aligned_cols=376  Identities=24%  Similarity=0.371  Sum_probs=296.7

Q ss_pred             CCccccccccCCCCchhHHHHHHHHHhCCeEEEeeCCeeEEEecCHHHHHHHHHhCCCccCCc-----------------
Q 045077            1 MASDGHLHLLGGREPAHRVLDNMADKYGPIFTIRMGINRALVVSNWEIAKECLTTHDKVFANP-----------------   63 (409)
Q Consensus         1 ~P~~G~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~-----------------   63 (409)
                      +|++||+.++.  ++++..+.+|+++||++|++++|+.++|+++||+++++++.++...|..+                 
T Consensus        37 ~p~~G~~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~~~~~~~l~~  114 (482)
T PTZ00404         37 IPILGNLHQLG--NLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIKHGTFYHGIVT  114 (482)
T ss_pred             CCeeccHhhhc--ccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceeeeeccCCceec
Confidence            58999999887  57899999999999999999999999999999999999998654333221                 


Q ss_pred             ------------hhhhccHHHHHHhHHhHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHHHhhHHH-----HHHHH
Q 045077           64 ------------TLELLSNHRLEKLKNVREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFADTTRSVL-----LTRFF  126 (409)
Q Consensus        64 ------------~~~~fs~~~l~~~~~~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi-----G~~~~  126 (409)
                                  +.+.|+.++++.+.+.+.+.++.+++.|.+.   .++| +  .+|+.+.+..++++++     |.++.
T Consensus       115 ~~g~~w~~~Rk~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~---~~~~-~--~vd~~~~~~~~~~dvi~~~~fG~~~~  188 (482)
T PTZ00404        115 SSGEYWKRNREIVGKAMRKTNLKHIYDLLDDQVDVLIESMKKI---ESSG-E--TFEPRYYLTKFTMSAMFKYIFNEDIS  188 (482)
T ss_pred             cChHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHH---HhcC-C--ccCHHHHHHHHHHHHHHHHHhccccc
Confidence                        7889999999999999999999999999765   4345 4  7999999999999999     32210


Q ss_pred             --------------Hhhcc-------cccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhcCcc
Q 045077          127 --------------EMSGK-------FVVSDALPFLRWLDIGCDERSMKKIARESDIVVQGWLEEHKRKRDSQEVKKEEE  185 (409)
Q Consensus       127 --------------~~~~~-------~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  185 (409)
                                    .....       ......++++.... ........+..+.+.+++.+.++++++..+.    ....
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~  263 (482)
T PTZ00404        189 FDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLY-YQYLEHTDKNFKKIKKFIKEKYHEHLKTIDP----EVPR  263 (482)
T ss_pred             cccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHccCC----CCcc
Confidence                          00000       00011111111110 0011222344555666666666655443222    2356


Q ss_pred             hHHHHHHhhccCccccCCCch-hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhcCCCCCChhh
Q 045077          186 DFMYVMLSILGDAEQYSGRDV-DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVGTKKQVNESD  264 (409)
Q Consensus       186 d~l~~ll~~~~~~~~~~~~~l-~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~  264 (409)
                      |+++.|++...+.   .  .. .+++++++..+++||+|||+++++|++++|++||++|+|+++|+++++++++.+++++
T Consensus       264 dll~~ll~~~~~~---~--~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~  338 (482)
T PTZ00404        264 DLLDLLIKEYGTN---T--DDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSD  338 (482)
T ss_pred             cHHHHHHHHhccC---C--cccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCCCCccc
Confidence            9999999864321   1  11 3458899999999999999999999999999999999999999999998767789999


Q ss_pred             cccChhHHHHHHHHhhcCCCCccccccccccceee-ccee-------------ccCCCCCCCCCCCcccCcccCCCCCcc
Q 045077          265 IKKLVYLQAILKEAMRLYPAVPLLVPHESIEECTV-NGYH-------------LHRDPRAWEEPCKFQPKRFLTRHKDID  330 (409)
Q Consensus       265 ~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~-------------~~~d~~~~~dp~~F~P~R~l~~~~~~~  330 (409)
                      +++|||++|||+|+||++|++|..++|.+.+|+++ +||.             +||||++||||++|+||||+++.    
T Consensus       339 l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~----  414 (482)
T PTZ00404        339 RQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD----  414 (482)
T ss_pred             cccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC----
Confidence            99999999999999999999998669999999999 8887             89999999999999999999753    


Q ss_pred             ccCCCCccccCCCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCCCCCccccccceeccCCCeEEEEEec
Q 045077          331 VKGQNFELLPFSSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNEPLDMEEGLGLTLEKSTPLEVLVAPR  402 (409)
Q Consensus       331 ~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  402 (409)
                         .+..++|||+|+|.|+|++||++|++++++.|+++|+++++++.+++.....++++. +.+++|++++|
T Consensus       415 ---~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        415 ---SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLK-PNKFKVLLEKR  482 (482)
T ss_pred             ---CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeec-CCCceeeeecC
Confidence               356899999999999999999999999999999999999887655444444566665 57899999887


No 9  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=2.4e-63  Score=482.05  Aligned_cols=393  Identities=32%  Similarity=0.577  Sum_probs=307.5

Q ss_pred             CCccccccccCCCCchhHHHHHHHHHhCCeEEEeeCCeeEEEecCHHHHHHHHHhCCCccCCc-----------------
Q 045077            1 MASDGHLHLLGGREPAHRVLDNMADKYGPIFTIRMGINRALVVSNWEIAKECLTTHDKVFANP-----------------   63 (409)
Q Consensus         1 ~P~~G~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~-----------------   63 (409)
                      +|++||++++.  +.++.++.+|+++||++|++++|+.++|+++||+++++++.++...|+.+                 
T Consensus        44 ~Pl~G~l~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~~~~~~~~~l  121 (516)
T PLN02183         44 LPIIGNMLMMD--QLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAISYLTYDRADMA  121 (516)
T ss_pred             CCeeccHHhcC--CcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchhccccCCCceE
Confidence            69999998876  55678999999999999999999999999999999999998654332221                 


Q ss_pred             ---------------hhhhccHHHHHHhHHhHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHHHhhHHH-----HH
Q 045077           64 ---------------TLELLSNHRLEKLKNVREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFADTTRSVL-----LT  123 (409)
Q Consensus        64 ---------------~~~~fs~~~l~~~~~~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi-----G~  123 (409)
                                     +.++|+.++++.+.+.+ ++++.+++.|...     .| +  ++|+.+++..++.+++     |.
T Consensus       122 ~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~~~~~~l~~~-----~~-~--~v~~~~~~~~~~~~vi~~~~fG~  192 (516)
T PLN02183        122 FAHYGPFWRQMRKLCVMKLFSRKRAESWASVR-DEVDSMVRSVSSN-----IG-K--PVNIGELIFTLTRNITYRAAFGS  192 (516)
T ss_pred             eCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHhc-----CC-C--cEeHHHHHHHHHHHHHHhHhhcC
Confidence                           35788988888888864 5788888888543     35 5  8999999999999999     32


Q ss_pred             H-------HHHh-------hcccccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHhhhchhh----hhcCcc
Q 045077          124 R-------FFEM-------SGKFVVSDALPFLRWLDIGCDERSMKKIARESDIVVQGWLEEHKRKRDSQE----VKKEEE  185 (409)
Q Consensus       124 ~-------~~~~-------~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~~~~  185 (409)
                      .       +...       .........+|++.++......++..+..+.+.+++.+.+++++++...++    .+....
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  272 (516)
T PLN02183        193 SSNEGQDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADNDSEEAET  272 (516)
T ss_pred             cccchHHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccc
Confidence            2       1111       111223355666655422223456667778888888888888765433211    011345


Q ss_pred             hHHHHHHhhccCcc-------ccCCCch-hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhcCC
Q 045077          186 DFMYVMLSILGDAE-------QYSGRDV-DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVGTK  257 (409)
Q Consensus       186 d~l~~ll~~~~~~~-------~~~~~~l-~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~  257 (409)
                      |+++.+++...++.       ...+..+ ++++..++.++++||+|||+++++|++++|++||++|+|+++|++++++.+
T Consensus       273 d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~~~  352 (516)
T PLN02183        273 DMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVGLN  352 (516)
T ss_pred             cHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCC
Confidence            89999998543210       0012247 899999999999999999999999999999999999999999999999866


Q ss_pred             CCCChhhcccChhHHHHHHHHhhcCCCCccccccccccceeeccee-------------ccCCCCCCCCCCCcccCcccC
Q 045077          258 KQVNESDIKKLVYLQAILKEAMRLYPAVPLLVPHESIEECTVNGYH-------------LHRDPRAWEEPCKFQPKRFLT  324 (409)
Q Consensus       258 ~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~-------------~~~d~~~~~dp~~F~P~R~l~  324 (409)
                      +.++.+++++|||++|||+|+||++||+|+. .|.+.+|++++||.             +||||++|+||++|+||||++
T Consensus       353 ~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~PeRfl~  431 (516)
T PLN02183        353 RRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSRFLK  431 (516)
T ss_pred             CCCCHHHhccChHHHHHHHHHhccCCCccce-eeeccCceeECCEEECCCCEEEEehhhhcCCccccCCccccCchhhCC
Confidence            7789999999999999999999999999997 69999999999988             899999999999999999997


Q ss_pred             CCCCccccCCCCccccCCCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCCC---CCccccccceeccCCCeEEEEEe
Q 045077          325 RHKDIDVKGQNFELLPFSSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNEP---LDMEEGLGLTLEKSTPLEVLVAP  401 (409)
Q Consensus       325 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~  401 (409)
                      ++.. .....+..++|||+|+|+|+|++||++|+++++|+|+++|++++.++..   .+.....+.+.+++.++.+.+++
T Consensus       432 ~~~~-~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  510 (516)
T PLN02183        432 PGVP-DFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAPRATRLVAVPTY  510 (516)
T ss_pred             CCCc-cccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccccccCCCcEEEeec
Confidence            5421 1112456899999999999999999999999999999999999887642   23223345555566788999998


Q ss_pred             cCCCCC
Q 045077          402 RLSASL  407 (409)
Q Consensus       402 r~~~~~  407 (409)
                      | .+++
T Consensus       511 r-~~~~  515 (516)
T PLN02183        511 R-LQCP  515 (516)
T ss_pred             C-CCCC
Confidence            8 5443


No 10 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=8.4e-63  Score=478.55  Aligned_cols=396  Identities=23%  Similarity=0.423  Sum_probs=308.9

Q ss_pred             CCccccccccCC-CCchhHHHHHHHHHhCCeEEEeeCCeeEEEecCHHHHHHHHHhCCCccCCc----------------
Q 045077            1 MASDGHLHLLGG-REPAHRVLDNMADKYGPIFTIRMGINRALVVSNWEIAKECLTTHDKVFANP----------------   63 (409)
Q Consensus         1 ~P~~G~~~~~~~-~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~----------------   63 (409)
                      +|++||++.+.. ..+++..+.+|+++||++|++++|+.++|+++||+++++++.++...|+.+                
T Consensus        43 ~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~~~~~~~~~~~~  122 (519)
T PLN00168         43 VPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVASSRLLGESDNTI  122 (519)
T ss_pred             CcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccchhhhccCCCce
Confidence            589999987642 245889999999999999999999999999999999999998654433221                


Q ss_pred             ----------------hhhhccHHHHHHhHHhHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHHHhhHHH-----H
Q 045077           64 ----------------TLELLSNHRLEKLKNVREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFADTTRSVL-----L  122 (409)
Q Consensus        64 ----------------~~~~fs~~~l~~~~~~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi-----G  122 (409)
                                      +.++|+.++++.+.+.+.+.++.+++.|.+.   ...+ +  .+|+.+.+..++.+++     |
T Consensus       123 ~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~---~~~~-~--~v~~~~~~~~~~~~ii~~~~fG  196 (519)
T PLN00168        123 TRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRRE---AEDA-A--APRVVETFQYAMFCLLVLMCFG  196 (519)
T ss_pred             eCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHh---cCCC-C--CcCHHHHHHHHHHHHHHHHHcC
Confidence                            5778999999999999999999999999875   4444 4  6788888888888877     4


Q ss_pred             HHH----H----Hh--------hcccccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHhhhch----hhhh-
Q 045077          123 TRF----F----EM--------SGKFVVSDALPFLRWLDIGCDERSMKKIARESDIVVQGWLEEHKRKRDS----QEVK-  181 (409)
Q Consensus       123 ~~~----~----~~--------~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~-  181 (409)
                      .++    .    ..        .....+..++|++.+.......++..+..+.+.+++..+++++++....    +... 
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  276 (519)
T PLN00168        197 ERLDEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKNHLGQGGEPPK  276 (519)
T ss_pred             CCcChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCcccc
Confidence            322    0    00        0111223445543322111223445567778888999999888764311    0000 


Q ss_pred             ---cCcchHHHHHHhhccCccccCCCch-hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhcCC
Q 045077          182 ---KEEEDFMYVMLSILGDAEQYSGRDV-DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVGTK  257 (409)
Q Consensus       182 ---~~~~d~l~~ll~~~~~~~~~~~~~l-~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~  257 (409)
                         ....|+++.|++....++  .+..+ ++++++++.++++||+|||+++++|++++|++||++|+|+++|++++++.+
T Consensus       277 ~~~~~~~d~l~~ll~~~~~~~--~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~  354 (519)
T PLN00168        277 KETTFEHSYVDTLLDIRLPED--GDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDD  354 (519)
T ss_pred             ccccccccHHHHHHhhhcccc--ccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC
Confidence               014589999997543210  12357 999999999999999999999999999999999999999999999999753


Q ss_pred             -CCCChhhcccChhHHHHHHHHhhcCCCCccccccccccceeeccee-------------ccCCCCCCCCCCCcccCccc
Q 045077          258 -KQVNESDIKKLVYLQAILKEAMRLYPAVPLLVPHESIEECTVNGYH-------------LHRDPRAWEEPCKFQPKRFL  323 (409)
Q Consensus       258 -~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~-------------~~~d~~~~~dp~~F~P~R~l  323 (409)
                       +.++.+++.+|||++|||+|++|++|+++..++|.+.+|++++||.             +||||++||||++|+||||+
T Consensus       355 ~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~  434 (519)
T PLN00168        355 QEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPERFL  434 (519)
T ss_pred             CCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCccccCcccCC
Confidence             6789999999999999999999999999988799999999999988             89999999999999999999


Q ss_pred             CCCCCc--ccc-CCCCccccCCCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCCCCCccccccceeccCCCeEEEEE
Q 045077          324 TRHKDI--DVK-GQNFELLPFSSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNEPLDMEEGLGLTLEKSTPLEVLVA  400 (409)
Q Consensus       324 ~~~~~~--~~~-~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  400 (409)
                      ++....  +.. ..+..++|||+|+|+|+|++||++|+++++++|+++|+++++++.+++.....+++..++.+++|+++
T Consensus       435 ~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  514 (519)
T PLN00168        435 AGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDFAEKREFTTVMAKPLRARLV  514 (519)
T ss_pred             CCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCChhhhceeEEeecCCcEEEEE
Confidence            753211  111 23457999999999999999999999999999999999999876544443333455666678999999


Q ss_pred             ecCC
Q 045077          401 PRLS  404 (409)
Q Consensus       401 ~r~~  404 (409)
                      +|+.
T Consensus       515 ~R~~  518 (519)
T PLN00168        515 PRRT  518 (519)
T ss_pred             eccC
Confidence            9864


No 11 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=1.8e-62  Score=470.30  Aligned_cols=384  Identities=25%  Similarity=0.445  Sum_probs=301.8

Q ss_pred             CCccccccccCCCCchhHHHHHHHHHhCCeEEEeeCCeeEEEecCHHHHHHHHHhCCCccCCc-----------------
Q 045077            1 MASDGHLHLLGGREPAHRVLDNMADKYGPIFTIRMGINRALVVSNWEIAKECLTTHDKVFANP-----------------   63 (409)
Q Consensus         1 ~P~~G~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~-----------------   63 (409)
                      +|++||++++.. ++++..+.+|+++||++|++++|++++|+|+||+++++++.++...|+.+                 
T Consensus         7 lP~iG~l~~~~~-~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~~~~~~   85 (466)
T PLN02655          7 LPVIGNLLQLKE-KKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRDKSMVA   85 (466)
T ss_pred             CCccccHHHcCC-CchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcCCCcee
Confidence            699999999874 56899999999999999999999999999999999999998766555443                 


Q ss_pred             ---------------hhhhccHHHHHHhHHhHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHHHhhHHH-----HH
Q 045077           64 ---------------TLELLSNHRLEKLKNVREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFADTTRSVL-----LT  123 (409)
Q Consensus        64 ---------------~~~~fs~~~l~~~~~~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi-----G~  123 (409)
                                     ..+.|+..+++.+.+.+++.++.+++.+.+... ...+ +  ++|+.+.+..++++++     |.
T Consensus        86 ~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~-~--~vd~~~~~~~~t~dvi~~~~fG~  161 (466)
T PLN02655         86 TSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVK-DDPH-S--PVNFRDVFENELFGLSLIQALGE  161 (466)
T ss_pred             eCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhcc-ccCC-C--ceeHHHHHHHHHHHHHHHHHhcc
Confidence                           233455555666777777788888888765421 1124 4  8999999999999999     43


Q ss_pred             HHHH------------------hh-c------ccccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHhhhchh
Q 045077          124 RFFE------------------MS-G------KFVVSDALPFLRWLDIGCDERSMKKIARESDIVVQGWLEEHKRKRDSQ  178 (409)
Q Consensus       124 ~~~~------------------~~-~------~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  178 (409)
                      ++..                  .. .      ...+.+++|++++++.....+...+....+.+++..+++++++....+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  241 (466)
T PLN02655        162 DVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIARG  241 (466)
T ss_pred             ccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence            2200                  00 0      011223556555553222223333334445677778888777653332


Q ss_pred             hhhcCcchHHHHHHhhccCccccCCCch-hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhcCC
Q 045077          179 EVKKEEEDFMYVMLSILGDAEQYSGRDV-DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVGTK  257 (409)
Q Consensus       179 ~~~~~~~d~l~~ll~~~~~~~~~~~~~l-~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~  257 (409)
                         ....|+++.+++...        .+ ++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++.+
T Consensus       242 ---~~~~d~l~~ll~~~~--------~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~  310 (466)
T PLN02655        242 ---EERDCYLDFLLSEAT--------HLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDE  310 (466)
T ss_pred             ---CCcccHHHHHHhccC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCC
Confidence               234589999997542        36 899999999999999999999999999999999999999999999999864


Q ss_pred             CCCChhhcccChhHHHHHHHHhhcCCCCccccccccccceeeccee-------------ccCCCCCCCCCCCcccCcccC
Q 045077          258 KQVNESDIKKLVYLQAILKEAMRLYPAVPLLVPHESIEECTVNGYH-------------LHRDPRAWEEPCKFQPKRFLT  324 (409)
Q Consensus       258 ~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~-------------~~~d~~~~~dp~~F~P~R~l~  324 (409)
                      . ++++++.+|||++|||+|+||++|+++...+|.+.+|++++||.             +||||++|+||++|+||||++
T Consensus       311 ~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~  389 (466)
T PLN02655        311 R-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLG  389 (466)
T ss_pred             C-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCC
Confidence            4 99999999999999999999999999998789999999999987             899999999999999999997


Q ss_pred             CCCCccccCCCCccccCCCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCCCCCccccccceeccCCCeEEEEEecCC
Q 045077          325 RHKDIDVKGQNFELLPFSSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNEPLDMEEGLGLTLEKSTPLEVLVAPRLS  404 (409)
Q Consensus       325 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  404 (409)
                      ..+.   ......++|||+|+|.|+|++||++|+++++++||++|++++.++.. +.....+++..++.+++|++.+|..
T Consensus       390 ~~~~---~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~  465 (466)
T PLN02655        390 EKYE---SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-EKEDTVQLTTQKLHPLHAHLKPRGS  465 (466)
T ss_pred             CCcc---cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-cccchhheeEeecCCcEEEEeecCC
Confidence            5421   11346799999999999999999999999999999999999987643 2233456777788899999999975


Q ss_pred             C
Q 045077          405 A  405 (409)
Q Consensus       405 ~  405 (409)
                      +
T Consensus       466 ~  466 (466)
T PLN02655        466 M  466 (466)
T ss_pred             C
Confidence            3


No 12 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=2.1e-62  Score=474.18  Aligned_cols=388  Identities=30%  Similarity=0.557  Sum_probs=299.9

Q ss_pred             CCccccccccCCCCchhHHHHHHHHHhCCeEEEeeCCeeEEEecCHHHHHHHHHhCCCccCCc-----------------
Q 045077            1 MASDGHLHLLGGREPAHRVLDNMADKYGPIFTIRMGINRALVVSNWEIAKECLTTHDKVFANP-----------------   63 (409)
Q Consensus         1 ~P~~G~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~-----------------   63 (409)
                      +|++||++++.. .+++.++.+|+++||++|++++|+.++|+++||+++++++.++...|.++                 
T Consensus        37 ~p~~G~l~~l~~-~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (502)
T PLN02966         37 LPVIGNLLQLQK-LNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFISYGRRDMA  115 (502)
T ss_pred             CCeeccHHhcCC-CChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCccceeeccCcceee
Confidence            599999998853 56899999999999999999999999999999999999998654322210                 


Q ss_pred             ---------------hhhhccHHHHHHhHHhHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHHHhhHHH-----HH
Q 045077           64 ---------------TLELLSNHRLEKLKNVREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFADTTRSVL-----LT  123 (409)
Q Consensus        64 ---------------~~~~fs~~~l~~~~~~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi-----G~  123 (409)
                                     +.+.|+.+++..+.+.+++.++++++.|.+.   ..+| +  .+|+.+++..++++++     |.
T Consensus       116 ~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~---~~~~-~--~vdl~~~~~~~t~dvi~~~~fG~  189 (502)
T PLN02966        116 LNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKA---ADKS-E--VVDISELMLTFTNSVVCRQAFGK  189 (502)
T ss_pred             eCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHh---ccCC-C--ceeHHHHHHHHHHHHHHHHHhCC
Confidence                           4578999999999999999999999999765   4445 5  7999999999999999     43


Q ss_pred             HH----------HHhh-------cccccccccccccccc-cCccHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhcCcc
Q 045077          124 RF----------FEMS-------GKFVVSDALPFLRWLD-IGCDERSMKKIARESDIVVQGWLEEHKRKRDSQEVKKEEE  185 (409)
Q Consensus       124 ~~----------~~~~-------~~~~~~~~~p~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  185 (409)
                      ++          ....       .......++|++..++ +....+......+.+.+++.+.++++.+.....   ....
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~  266 (502)
T PLN02966        190 KYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRVK---PETE  266 (502)
T ss_pred             ccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhccccc---cccc
Confidence            22          0000       1111223344432221 111122333455566777777777655422111   2346


Q ss_pred             hHHHHHHhhccCccccCCCch-hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhcC--CCCCCh
Q 045077          186 DFMYVMLSILGDAEQYSGRDV-DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVGT--KKQVNE  262 (409)
Q Consensus       186 d~l~~ll~~~~~~~~~~~~~l-~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~--~~~~~~  262 (409)
                      |+++.+++..+++ . .+..+ ++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++.  ++.+++
T Consensus       267 ~~l~~l~~~~~~~-~-~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~  344 (502)
T PLN02966        267 SMIDLLMEIYKEQ-P-FASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTE  344 (502)
T ss_pred             cHHHHHHHHHhcc-C-cCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCH
Confidence            8999999765432 0 12247 89999999999999999999999999999999999999999999999874  245799


Q ss_pred             hhcccChhHHHHHHHHhhcCCCCccccccccccceeeccee-------------ccCCCCCC-CCCCCcccCcccCCCCC
Q 045077          263 SDIKKLVYLQAILKEAMRLYPAVPLLVPHESIEECTVNGYH-------------LHRDPRAW-EEPCKFQPKRFLTRHKD  328 (409)
Q Consensus       263 ~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~-------------~~~d~~~~-~dp~~F~P~R~l~~~~~  328 (409)
                      +|+++|||++|||+|+||++|+++..++|.+.+|++++||.             +||||++| |||++|+||||+++.+ 
T Consensus       345 ~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~-  423 (502)
T PLN02966        345 DDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEV-  423 (502)
T ss_pred             hhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcCCCC-
Confidence            99999999999999999999999997789999999999988             89999999 9999999999997542 


Q ss_pred             ccccCCCCccccCCCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCCC---CCccccccceeccCCCeEEEEEec
Q 045077          329 IDVKGQNFELLPFSSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNEP---LDMEEGLGLTLEKSTPLEVLVAPR  402 (409)
Q Consensus       329 ~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~r  402 (409)
                       .....+..++|||+|+|+|+|++||++|++++++.||++|++++.++..   ++.....+++..++..+.++..+.
T Consensus       424 -~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (502)
T PLN02966        424 -DFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLVPEKV  499 (502)
T ss_pred             -CcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCeEEEEEeC
Confidence             1122456899999999999999999999999999999999999987642   333344455554445666555543


No 13 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1.7e-62  Score=477.07  Aligned_cols=388  Identities=21%  Similarity=0.342  Sum_probs=303.4

Q ss_pred             CCccccccccCC-----------------CCchhHHHHHHHHHhCCeEEEeeCCeeEEEecCHHHHHHHHHhCCCccCCc
Q 045077            1 MASDGHLHLLGG-----------------REPAHRVLDNMADKYGPIFTIRMGINRALVVSNWEIAKECLTTHDKVFANP   63 (409)
Q Consensus         1 ~P~~G~~~~~~~-----------------~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~   63 (409)
                      +|++||++++..                 .......+.+|+++||++|++|+|+.++|+++||+++++++.++...+...
T Consensus        50 ~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~~~~~~~~r~  129 (516)
T PLN02290         50 RPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLTKYNTVTGKS  129 (516)
T ss_pred             CcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHhcCCCCCCCc
Confidence            599999988741                 012334578999999999999999999999999999999998653211110


Q ss_pred             -----------------------------hhhhccHHHHHHhHHhHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHH
Q 045077           64 -----------------------------TLELLSNHRLEKLKNVREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFA  114 (409)
Q Consensus        64 -----------------------------~~~~fs~~~l~~~~~~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~  114 (409)
                                                   +.+.|+.++++.+.+.+.++++.+++.|.+.   .+++..  ++|+.+.+.
T Consensus       130 ~~~~~~~~~~~g~~l~~~~g~~Wk~~Rk~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~---~~~~~~--~vd~~~~~~  204 (516)
T PLN02290        130 WLQQQGTKHFIGRGLLMANGADWYHQRHIAAPAFMGDRLKGYAGHMVECTKQMLQSLQKA---VESGQT--EVEIGEYMT  204 (516)
T ss_pred             chhhhHHHHHhcCCccccCchHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHHHHHH---HhcCCc--eEEhHHHHH
Confidence                                         6778999999999999999999999999875   332213  789999999


Q ss_pred             HHhhHHH-----HHHH------HHh-------hcccccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 045077          115 DTTRSVL-----LTRF------FEM-------SGKFVVSDALPFLRWLDIGCDERSMKKIARESDIVVQGWLEEHKRKRD  176 (409)
Q Consensus       115 ~~~~~vi-----G~~~------~~~-------~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  176 (409)
                      .++++++     |.++      ...       .........+|++.+++ ....+......+.+.+++.+.++++++..+
T Consensus       205 ~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  283 (516)
T PLN02290        205 RLTADIISRTEFDSSYEKGKQIFHLLTVLQRLCAQATRHLCFPGSRFFP-SKYNREIKSLKGEVERLLMEIIQSRRDCVE  283 (516)
T ss_pred             HHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHhhhhhcCchhhhCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999     4332      000       00001112234443332 122345556677888899999988876543


Q ss_pred             hhhhhcCcchHHHHHHhhccCccccCCCch-hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhc
Q 045077          177 SQEVKKEEEDFMYVMLSILGDAEQYSGRDV-DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVG  255 (409)
Q Consensus       177 ~~~~~~~~~d~l~~ll~~~~~~~~~~~~~l-~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~  255 (409)
                      .+..+....|+++.+++...+.+ .++..+ ++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++
T Consensus       284 ~~~~~~~~~d~l~~ll~~~~~~~-~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~  362 (516)
T PLN02290        284 IGRSSSYGDDLLGMLLNEMEKKR-SNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCG  362 (516)
T ss_pred             cccCCCCCCCHHHHHHHhccccC-CCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhC
Confidence            32111234699999997643221 012246 8889999999999999999999999999999999999999999999998


Q ss_pred             CCCCCChhhcccChhHHHHHHHHhhcCCCCccccccccccceeeccee-------------ccCCCCCC-CCCCCcccCc
Q 045077          256 TKKQVNESDIKKLVYLQAILKEAMRLYPAVPLLVPHESIEECTVNGYH-------------LHRDPRAW-EEPCKFQPKR  321 (409)
Q Consensus       256 ~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~-------------~~~d~~~~-~dp~~F~P~R  321 (409)
                      .+ .++++++++||||+|||+|+||++|+++.. +|.+.+|++++||.             +||||++| +||++|+|||
T Consensus       363 ~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~~-~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeR  440 (516)
T PLN02290        363 GE-TPSVDHLSKLTLLNMVINESLRLYPPATLL-PRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDR  440 (516)
T ss_pred             CC-CCCHHHHhcChHHHHHHHHHHHcCCCcccc-ceeecCCeeECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccc
Confidence            64 789999999999999999999999999975 99999999999987             89999999 8999999999


Q ss_pred             ccCCCCCccccCCCCccccCCCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCCCCCccccccceeccCCCeEEEEEe
Q 045077          322 FLTRHKDIDVKGQNFELLPFSSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNEPLDMEEGLGLTLEKSTPLEVLVAP  401 (409)
Q Consensus       322 ~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  401 (409)
                      |++...     .....++|||+|+|+|+|++||++|++++++.|+++|+++++++.+  .....+++..|+.+++|++++
T Consensus       441 fl~~~~-----~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~  513 (516)
T PLN02290        441 FAGRPF-----APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYR--HAPVVVLTIKPKYGVQVCLKP  513 (516)
T ss_pred             cCCCCC-----CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcc--cCccceeeecCCCCCeEEEEe
Confidence            995431     1345799999999999999999999999999999999999877532  112235678888999999999


Q ss_pred             cCC
Q 045077          402 RLS  404 (409)
Q Consensus       402 r~~  404 (409)
                      |++
T Consensus       514 ~~~  516 (516)
T PLN02290        514 LNP  516 (516)
T ss_pred             CCC
Confidence            874


No 14 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=2.2e-62  Score=475.05  Aligned_cols=389  Identities=30%  Similarity=0.499  Sum_probs=295.4

Q ss_pred             CCccccccccCCCCchhHHHHHHHHHhCCeEEEeeCCeeEEEecCHHHHHHHHHhCCCccCCc-----------------
Q 045077            1 MASDGHLHLLGGREPAHRVLDNMADKYGPIFTIRMGINRALVVSNWEIAKECLTTHDKVFANP-----------------   63 (409)
Q Consensus         1 ~P~~G~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~-----------------   63 (409)
                      .|++||+..+.. ...+..+.+|+++||+||++++|+.++|+++||+++++++.+++..|..+                 
T Consensus        38 ~p~~g~l~~~~~-~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~~~~g~~~~~l  116 (503)
T PLN02394         38 VPIFGNWLQVGD-DLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMV  116 (503)
T ss_pred             CCeeeeHHhcCC-CchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHhHhccCCCcee
Confidence            488999988863 33678999999999999999999999999999999999997654333211                 


Q ss_pred             --------------h-hhhccHHHHHHhHHhHHHHHHHHHHHHHHHhhhcc-CCCchhhHHHHHHHHHHhhHHH-----H
Q 045077           64 --------------T-LELLSNHRLEKLKNVREYELKTCLKELYELWNKNK-STDKLLLVEMKRWFADTTRSVL-----L  122 (409)
Q Consensus        64 --------------~-~~~fs~~~l~~~~~~~~~~~~~ll~~l~~~~~~~~-~g~~~~~vdl~~~~~~~~~~vi-----G  122 (409)
                                    + .+.|+.+++..+.+.++++++++++.|.+.   .. .+ +  .+|+.+.+..+++|++     |
T Consensus       117 ~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~---~~~~~-~--~v~~~~~~~~~~~dvi~~~~fG  190 (503)
T PLN02394        117 FTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRAN---PEAAT-E--GVVIRRRLQLMMYNIMYRMMFD  190 (503)
T ss_pred             ecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHh---hhccC-C--cEecHHHHHHHHHHHHHHHHhC
Confidence                          4 488999999999999999999999999765   22 23 3  6899999999999998     4


Q ss_pred             HHHHHhh-----------c-------c--cccccccccccccccCccHHHHHHHHHHHHH-HHHHHHHHHHhhhchh-hh
Q 045077          123 TRFFEMS-----------G-------K--FVVSDALPFLRWLDIGCDERSMKKIARESDI-VVQGWLEEHKRKRDSQ-EV  180 (409)
Q Consensus       123 ~~~~~~~-----------~-------~--~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~-~~  180 (409)
                      .++....           .       .  ..+..++|++.+.. ....+........... +....++++++..+.. ..
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  269 (503)
T PLN02394        191 RRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFL-RGYLKICQDVKERRLALFKDYFVDERKKLMSAKGMD  269 (503)
T ss_pred             CCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Confidence            3321000           0       0  01112233322210 1111111122222222 2334555555432110 00


Q ss_pred             hcCcchHHHHHHhhccCccccCCCch-hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhcCCCC
Q 045077          181 KKEEEDFMYVMLSILGDAEQYSGRDV-DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVGTKKQ  259 (409)
Q Consensus       181 ~~~~~d~l~~ll~~~~~~~~~~~~~l-~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~  259 (409)
                      .+...|+++.|++...++      .+ ++++..++.++++||+|||+++++|++++|++||++|+|+++|++++++.++.
T Consensus       270 ~~~~~d~l~~ll~~~~~~------~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~  343 (503)
T PLN02394        270 KEGLKCAIDHILEAQKKG------EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPGNQ  343 (503)
T ss_pred             cchhhhHHHHHHhccccC------CCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCC
Confidence            123468999999865432      36 88999999999999999999999999999999999999999999999987777


Q ss_pred             CChhhcccChhHHHHHHHHhhcCCCCccccccccccceeeccee-------------ccCCCCCCCCCCCcccCcccCCC
Q 045077          260 VNESDIKKLVYLQAILKEAMRLYPAVPLLVPHESIEECTVNGYH-------------LHRDPRAWEEPCKFQPKRFLTRH  326 (409)
Q Consensus       260 ~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~-------------~~~d~~~~~dp~~F~P~R~l~~~  326 (409)
                      ++++++++||||+|||+|+||++|++|+..+|.+.+|++++||.             +||||++|+||++|+||||++++
T Consensus       344 ~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~  423 (503)
T PLN02394        344 VTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEEE  423 (503)
T ss_pred             CCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCCCC
Confidence            89999999999999999999999999998889999999999987             89999999999999999999764


Q ss_pred             CCccccCCCCccccCCCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCCC-CCcccccc-ceeccCCCeEEEEEecC
Q 045077          327 KDIDVKGQNFELLPFSSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNEP-LDMEEGLG-LTLEKSTPLEVLVAPRL  403 (409)
Q Consensus       327 ~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~-~~~~~~~~~~v~~~~r~  403 (409)
                      +..........++|||+|+|+|+|++||++|+++++|.|+++|++++.+|.+ ++.....+ +....+.++++++.||.
T Consensus       424 ~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  502 (503)
T PLN02394        424 AKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFSLHIAKHSTVVFKPRS  502 (503)
T ss_pred             CcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCceeeccCCCceEEeecCC
Confidence            3211122456799999999999999999999999999999999999887753 55544443 44445679999999996


No 15 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=1.1e-62  Score=473.76  Aligned_cols=383  Identities=29%  Similarity=0.486  Sum_probs=309.0

Q ss_pred             CCccccccccCCCCchhHHHHHHHHHhCCeEEEeeCCeeEEEecCHHHHHHHHHhCCCccCCc-----------------
Q 045077            1 MASDGHLHLLGGREPAHRVLDNMADKYGPIFTIRMGINRALVVSNWEIAKECLTTHDKVFANP-----------------   63 (409)
Q Consensus         1 ~P~~G~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~-----------------   63 (409)
                      +|++||++++...+++++++.+|+++||+||++++++.++++|+||+++++++.++...++.+                 
T Consensus         7 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (463)
T PF00067_consen    7 LPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRGPFGGKG   86 (463)
T ss_dssp             BTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHHHHTTTS
T ss_pred             cCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccccccccc
Confidence            699999999874357899999999999999999999999999999999999998876554432                 


Q ss_pred             ---------------hhhhccHH-HHHHhHHhHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHHHhhHHH-----H
Q 045077           64 ---------------TLELLSNH-RLEKLKNVREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFADTTRSVL-----L  122 (409)
Q Consensus        64 ---------------~~~~fs~~-~l~~~~~~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi-----G  122 (409)
                                     +.+.|+.. ++ .+.+.+++.++.+++.|.+.   ...+ .  .+|+.+++..++++++     |
T Consensus        87 l~~~~~~~~~~~R~~~~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~---~~~~-~--~vd~~~~~~~~~~d~i~~~~fG  159 (463)
T PF00067_consen   87 LFFSDGERWRRQRRLLAPAFSSKKIL-KLEPLIDEEAEELIDQLRKK---AGSS-G--PVDLFDWLRRFALDVIGRVLFG  159 (463)
T ss_dssp             STTSSHHHHHHHHHHHHHHHSHHHHH-HHHHHHHHHHHHHHHHHHHT---TTSE-S--EEEHHHHHHHHHHHHHHHHHHS
T ss_pred             cccccccccccccccccccccccccc-cccccccccccccccccccc---cccc-c--eeeeeccccccccccccccccc
Confidence                           67778877 56 89999999999999999987   4433 3  6999999999999999     4


Q ss_pred             HHHH-----------Hhhc---------ccccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhc
Q 045077          123 TRFF-----------EMSG---------KFVVSDALPFLRWLDIGCDERSMKKIARESDIVVQGWLEEHKRKRDSQEVKK  182 (409)
Q Consensus       123 ~~~~-----------~~~~---------~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  182 (409)
                      .++.           ....         ...+...+|++.+++ ....+...++.+.+.+++.+.++++++....+  ..
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~  236 (463)
T PF00067_consen  160 KDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLP-TPLFRRFKRARDRLRKYIKEIIEERREELDDG--DE  236 (463)
T ss_dssp             SHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSS--SS
T ss_pred             ceeeecccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccc--cc
Confidence            3320           0000         012334455555442 22345666677888889999999888765542  12


Q ss_pred             CcchHHHHHHhhc-cCccccCCCch-hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhcCCCCC
Q 045077          183 EEEDFMYVMLSIL-GDAEQYSGRDV-DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVGTKKQV  260 (409)
Q Consensus       183 ~~~d~l~~ll~~~-~~~~~~~~~~l-~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~  260 (409)
                      ...|+++.+++.. ..+   .+..+ .++++++++.+++||+|||+.+++|++++|++||++|+|+++|+++++++++.+
T Consensus       237 ~~~d~l~~ll~~~~~~~---~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~  313 (463)
T PF00067_consen  237 SRRDLLDSLLQASSDSD---GPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGREI  313 (463)
T ss_dssp             SCSSHHHHHHHHHHTTT---TTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSSSH
T ss_pred             ccccccccccccccccc---cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            5679999999986 222   11257 999999999999999999999999999999999999999999999999877789


Q ss_pred             ChhhcccChhHHHHHHHHhhcCCCCccccccccccceeeccee-------------ccCCCCCCCCCCCcccCcccCCCC
Q 045077          261 NESDIKKLVYLQAILKEAMRLYPAVPLLVPHESIEECTVNGYH-------------LHRDPRAWEEPCKFQPKRFLTRHK  327 (409)
Q Consensus       261 ~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~-------------~~~d~~~~~dp~~F~P~R~l~~~~  327 (409)
                      +.+++++||||+|||+|++|++|+++..++|.+++|++++||.             +||||++|+||++|+|+||++.++
T Consensus       314 ~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~  393 (463)
T PF00067_consen  314 TFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERG  393 (463)
T ss_dssp             HHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999999999999999999999965699999999999987             899999999999999999999873


Q ss_pred             CccccCCCCccccCCCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCCCCCccccc-cceeccCCCeEEEE
Q 045077          328 DIDVKGQNFELLPFSSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNEPLDMEEGL-GLTLEKSTPLEVLV  399 (409)
Q Consensus       328 ~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~  399 (409)
                        ........++|||.|+|.|+|++||++|++++|++||++|+++++++......... +++. ++.+++|++
T Consensus       394 --~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  463 (463)
T PF00067_consen  394 --ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLL-PPKPLKVKF  463 (463)
T ss_dssp             --TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSE-EESSSEEEE
T ss_pred             --ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEe-eCCCcEEeC
Confidence              12246788999999999999999999999999999999999999876543333222 4445 446777764


No 16 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=1.5e-61  Score=473.22  Aligned_cols=384  Identities=25%  Similarity=0.394  Sum_probs=296.0

Q ss_pred             cccccccCCCCchhHHHHHHHHHhCCeEEEeeCCeeEEEecCHHHHHHHHHhCCCccCCc--------------------
Q 045077            4 DGHLHLLGGREPAHRVLDNMADKYGPIFTIRMGINRALVVSNWEIAKECLTTHDKVFANP--------------------   63 (409)
Q Consensus         4 ~G~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~--------------------   63 (409)
                      +||+..+.. ...+..+.+||++|||||++++|+.++++|+||+.+++++.++...|..+                    
T Consensus       142 ~G~l~~i~~-g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g~~l~~~dge  220 (633)
T PLN02738        142 KGSISAVRG-EAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMGKGLIPADGE  220 (633)
T ss_pred             cCcHHHhcC-chHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhccCCceecCCcH
Confidence            577766653 56889999999999999999999999999999999999998654333221                    


Q ss_pred             --------hhhhccHHHHHHhHHhHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHHHhhHHH-----HHHHH----
Q 045077           64 --------TLELLSNHRLEKLKNVREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFADTTRSVL-----LTRFF----  126 (409)
Q Consensus        64 --------~~~~fs~~~l~~~~~~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi-----G~~~~----  126 (409)
                              +.+.|+.+++..+++.+.+.++.+++.|.+.   ..+| +  .+|+...+..+++|+|     |.++.    
T Consensus       221 ~wr~rRr~l~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~---~~~g-~--~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~  294 (633)
T PLN02738        221 IWRVRRRAIVPALHQKYVAAMISLFGQASDRLCQKLDAA---ASDG-E--DVEMESLFSRLTLDIIGKAVFNYDFDSLSN  294 (633)
T ss_pred             HHHHHHHhccHhhhHHHHHHHHHHHHHHHHHHHHHHHHH---hcCC-C--cEeHHHHHHHHHHHHHHHHHhCCCcccccc
Confidence                    7889999999999999999999999999875   4455 5  8999999999999999     33221    


Q ss_pred             ---------Hhhccc---cccccccccccc--ccCccHHHHHHHHHHHHHHHHHHHHHHHhhhchh------h-hhcCcc
Q 045077          127 ---------EMSGKF---VVSDALPFLRWL--DIGCDERSMKKIARESDIVVQGWLEEHKRKRDSQ------E-VKKEEE  185 (409)
Q Consensus       127 ---------~~~~~~---~~~~~~p~l~~l--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~-~~~~~~  185 (409)
                               ......   ....+.+|...+  .+....++..+..+.+...+..+++.+++..+..      + ......
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~  374 (633)
T PLN02738        295 DTGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDP  374 (633)
T ss_pred             chHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccc
Confidence                     000000   001111122111  0111123344455556666666665544321110      0 012345


Q ss_pred             hHHHHHHhhccCccccCCCch-hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhcCCCCCChhh
Q 045077          186 DFMYVMLSILGDAEQYSGRDV-DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVGTKKQVNESD  264 (409)
Q Consensus       186 d~l~~ll~~~~~~~~~~~~~l-~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~  264 (409)
                      |+++.|++...        .+ ++++.++++.+++||+|||+++++|++++|++||++|+|+++|++++++ ++.+++++
T Consensus       375 dil~~Ll~~~~--------~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~-~~~~t~ed  445 (633)
T PLN02738        375 SILHFLLASGD--------DVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG-DRFPTIED  445 (633)
T ss_pred             hHHHHHHHcCC--------CCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC-CCCCCHHH
Confidence            89999986431        35 8899999999999999999999999999999999999999999999988 46789999


Q ss_pred             cccChhHHHHHHHHhhcCCCCccccccccccceeeccee-------------ccCCCCCCCCCCCcccCcccCCCCCccc
Q 045077          265 IKKLVYLQAILKEAMRLYPAVPLLVPHESIEECTVNGYH-------------LHRDPRAWEEPCKFQPKRFLTRHKDIDV  331 (409)
Q Consensus       265 ~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~-------------~~~d~~~~~dp~~F~P~R~l~~~~~~~~  331 (409)
                      +.+||||+|||+|+||++|+++.. +|.+.+|.+++||.             +||||++||||++|+||||+..+.....
T Consensus       446 L~kLPYL~AVIkEtLRL~p~~p~~-~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~  524 (633)
T PLN02738        446 MKKLKYTTRVINESLRLYPQPPVL-IRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNE  524 (633)
T ss_pred             HccCHHHHHHHHHHHhcCCCcccc-ceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccc
Confidence            999999999999999999999997 79999999999987             8999999999999999999954211111


Q ss_pred             cCCCCccccCCCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCCCCCccccccceeccCCCeEEEEEecCCC
Q 045077          332 KGQNFELLPFSSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNEPLDMEEGLGLTLEKSTPLEVLVAPRLSA  405 (409)
Q Consensus       332 ~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~  405 (409)
                      ...+..++|||.|+|+|+|++||++|++++|+.|+++|++++.++.+ ++....+.+..++.+++|++++|...
T Consensus       525 ~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~-~~~~~~~~~~~p~~~l~v~l~~R~~~  597 (633)
T PLN02738        525 TNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP-PVKMTTGATIHTTEGLKMTVTRRTKP  597 (633)
T ss_pred             cCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC-CcccccceEEeeCCCcEEEEEECCCC
Confidence            23456899999999999999999999999999999999999987642 33333456677788999999999664


No 17 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=1.6e-60  Score=456.45  Aligned_cols=385  Identities=26%  Similarity=0.408  Sum_probs=307.2

Q ss_pred             CCccccccccCCC-CchhHHHHHHHHHhCCeEEEeeCCeeEEEecCHHHHHHHHHhCCCccCCc----------------
Q 045077            1 MASDGHLHLLGGR-EPAHRVLDNMADKYGPIFTIRMGINRALVVSNWEIAKECLTTHDKVFANP----------------   63 (409)
Q Consensus         1 ~P~~G~~~~~~~~-~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~----------------   63 (409)
                      +|++||+.++.+. .++..++.++..+||++|+.|+|+.++|+++||+.+++|+.+........                
T Consensus        43 ~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~~~~~lG~gll  122 (497)
T KOG0157|consen   43 WPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPESLKPWLGDGLL  122 (497)
T ss_pred             CCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHHHHHHhcCccc
Confidence            5999999999752 36788999999999999999999999999999999999995332221111                


Q ss_pred             -------------hhhhccHHHHHHhHHhHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHHHhhHHH-----H--H
Q 045077           64 -------------TLELLSNHRLEKLKNVREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFADTTRSVL-----L--T  123 (409)
Q Consensus        64 -------------~~~~fs~~~l~~~~~~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi-----G--~  123 (409)
                                   +.++|+.+.++.+...+.+++..++..+...   . .| +  .+|+.+.+..+++|++     |  .
T Consensus       123 ~~~g~~W~~~Rk~~~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~---~-~~-~--~vd~~~~~~~~tld~i~~~~~G~~~  195 (497)
T KOG0157|consen  123 FSDGEKWHKHRKLLTPAFHFEILKSFVPVFIESSLILLLLLELA---A-SG-E--EVDLQDLLKRLTLDIICKTAMGPES  195 (497)
T ss_pred             cCCchHHHHHHhhccHhhhHHHHHHHHHHHHHHHHHHHHHHHHh---h-cC-C--eEcHHHHHHHHHHHHHHHHhcCCcc
Confidence                         7889999999999999999888888877774   3 34 2  4999999999999999     5  1


Q ss_pred             ---------HHHHh----hcccccccccc-cccccccCccHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhh--cCcchH
Q 045077          124 ---------RFFEM----SGKFVVSDALP-FLRWLDIGCDERSMKKIARESDIVVQGWLEEHKRKRDSQEVK--KEEEDF  187 (409)
Q Consensus       124 ---------~~~~~----~~~~~~~~~~p-~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~d~  187 (409)
                               ++...    ..........| +..++...+..++..++.+.++++++++|+++++....+...  ....|+
T Consensus       196 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~~~~~~~d~  275 (497)
T KOG0157|consen  196 LDAEGPELFEYVQAFDDLTELISKRINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEGSGEEKKRLDF  275 (497)
T ss_pred             ccccCCcccHHHHHHHHHHHHHHHHHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhH
Confidence                     11111    12223333445 333332223568888899999999999999999765432111  235678


Q ss_pred             HHHHHhhccCccccCCCch-hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhcCCC-CCChhhc
Q 045077          188 MYVMLSILGDAEQYSGRDV-DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVGTKK-QVNESDI  265 (409)
Q Consensus       188 l~~ll~~~~~~~~~~~~~l-~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~-~~~~~~~  265 (409)
                      ++.+.....       ..+ ++++++++.+|++||+|||+++++|++++|+.||++|+|+++|+.+++++.. ..+....
T Consensus       276 L~~~~~~~~-------~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~~~~~~~  348 (497)
T KOG0157|consen  276 LDTLLLEED-------KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDKWEVEKL  348 (497)
T ss_pred             HHHHHHhcc-------CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCCChhhh
Confidence            886332222       256 8999999999999999999999999999999999999999999999998543 2344444


Q ss_pred             ccChhHHHHHHHHhhcCCCCccccccccccceeec-cee-------------ccCCCCCCC-CCCCcccCcccCCCCCcc
Q 045077          266 KKLVYLQAILKEAMRLYPAVPLLVPHESIEECTVN-GYH-------------LHRDPRAWE-EPCKFQPKRFLTRHKDID  330 (409)
Q Consensus       266 ~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~-g~~-------------~~~d~~~~~-dp~~F~P~R~l~~~~~~~  330 (409)
                      ++|+|+++||+|||||+||+|+. .|.+.+|++++ ||.             +|||+.+|+ ||++||||||+++...  
T Consensus       349 ~~m~yl~~vi~EsLRLyppvp~~-~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~--  425 (497)
T KOG0157|consen  349 DQMKYLEMVIKESLRLYPPVPLV-ARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGEEK--  425 (497)
T ss_pred             hhhHHHHHHHHHHhccCCCCchh-hcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCCCCc--
Confidence            46999999999999999999998 89999999995 777             699999995 9999999999976421  


Q ss_pred             ccCCCCccccCCCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCCCCCccccccceeccCCCeEEEEEecCC
Q 045077          331 VKGQNFELLPFSSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNEPLDMEEGLGLTLEKSTPLEVLVAPRLS  404 (409)
Q Consensus       331 ~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  404 (409)
                      ...++.+|+|||+|+|.|+|++||++|+++++++|+++|+++++.+..  ......++++++.+++|++++|.+
T Consensus       426 ~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~--~~~~~~~~l~~~~gl~v~~~~r~~  497 (497)
T KOG0157|consen  426 AKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK--PKPVPELTLRPKNGLKVKLRPRGS  497 (497)
T ss_pred             CCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC--ceeeeEEEEEecCCeEEEEEeCCC
Confidence            134578999999999999999999999999999999999999987643  444567889999999999999964


No 18 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.6e-60  Score=429.42  Aligned_cols=385  Identities=21%  Similarity=0.305  Sum_probs=311.5

Q ss_pred             CCccccccccCC--CCchhHHHHHHHHHhCCeEEEe-eCCeeEEEecCHHHHHHHHHhCCCccCCc--------------
Q 045077            1 MASDGHLHLLGG--REPAHRVLDNMADKYGPIFTIR-MGINRALVVSNWEIAKECLTTHDKVFANP--------------   63 (409)
Q Consensus         1 ~P~~G~~~~~~~--~~~~~~~~~~~~~~yG~v~~i~-~~~~~~vvv~d~~~~~~vl~~~~~~~~~~--------------   63 (409)
                      +|++|.+..+..  ..+.|+....++++|||||+.. +|+...|.+.||+++..+++.++.. +.|              
T Consensus        58 ~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~~-P~Rp~~~~~w~~~rd~~  136 (519)
T KOG0159|consen   58 LPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGKY-PFRPLLIEPWVAYRDFR  136 (519)
T ss_pred             ccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCCC-CCcccccchhhhhHHhh
Confidence            577887774322  3679999999999999999999 8999999999999999999877522 222              


Q ss_pred             ---------------------hhhhccHHHHHHhHHhHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHHHhhHHH-
Q 045077           64 ---------------------TLELLSNHRLEKLKNVREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFADTTRSVL-  121 (409)
Q Consensus        64 ---------------------~~~~fs~~~l~~~~~~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi-  121 (409)
                                           ......++++++|.+.+++.+++++..+.+.-+..++. .  +.|+.+.+..++++.| 
T Consensus       137 ~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~-~--~~D~~~~l~~wslEsi~  213 (519)
T KOG0159|consen  137 GGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGE-L--VPDFAQELYRWSLESIC  213 (519)
T ss_pred             ccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccc-c--chhHHHHHHHHHHHHHH
Confidence                                 34566789999999999999999999998872211122 3  7899999999998888 


Q ss_pred             ----HHHH------------------HHhhcccccccccc-cccccccCccHHHHHHHHHHHHHHHHHHHHHHHhhhchh
Q 045077          122 ----LTRF------------------FEMSGKFVVSDALP-FLRWLDIGCDERSMKKIARESDIVVQGWLEEHKRKRDSQ  178 (409)
Q Consensus       122 ----G~~~------------------~~~~~~~~~~~~~p-~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  178 (409)
                          |.+.                  ...+.......+.| +.+++ .+..++++.+..+.+.++..++|+...++.+..
T Consensus       214 ~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p~l~r~~-~t~~wk~~~~~~D~i~~~~~~~Id~~l~~l~~~  292 (519)
T KOG0159|consen  214 LVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLMPSLWRYF-PTKVWKDFVRAWDQIFDVGDKYIDNALEELEKQ  292 (519)
T ss_pred             HHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhcchHHHhC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence                3333                  11222223344555 34444 355688999999999999999999988776553


Q ss_pred             hhh-cCcchHHHHHHhhccCccccCCCchhhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhcC-
Q 045077          179 EVK-KEEEDFMYVMLSILGDAEQYSGRDVDRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVGT-  256 (409)
Q Consensus       179 ~~~-~~~~d~l~~ll~~~~~~~~~~~~~l~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~-  256 (409)
                      ... .+..+++..++...+-+        .+++..++++++.||.||||.++.|+||+|++||++|++|++|+..+..+ 
T Consensus       293 ~~~~~~~~~~l~~~L~~~~l~--------~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~  364 (519)
T KOG0159|consen  293 DSAGSEYTGSLLELLLRKELS--------RKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLPSG  364 (519)
T ss_pred             cccccchhHHHHHHHHHccCC--------HHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCCc
Confidence            211 11223444444332221        78999999999999999999999999999999999999999999999987 


Q ss_pred             CCCCChhhcccChhHHHHHHHHhhcCCCCccccccccccceeeccee-------------ccCCCCCCCCCCCcccCccc
Q 045077          257 KKQVNESDIKKLVYLQAILKEAMRLYPAVPLLVPHESIEECTVNGYH-------------LHRDPRAWEEPCKFQPKRFL  323 (409)
Q Consensus       257 ~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~-------------~~~d~~~~~dp~~F~P~R~l  323 (409)
                      +..++.+++.++|||+|||||++||||.+|+. .|...+|.+++||.             +.+||++|++|++|+|||||
T Consensus       365 ~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~-~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeRWL  443 (519)
T KOG0159|consen  365 NSELTQKALTNMPYLRACIKETLRLYPVVPGN-GRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPERWL  443 (519)
T ss_pred             ccccchHHHhhCHHHHHHHHhhhceecccccc-ccccchhceeccceecCCCeEEEeehhhccChhhCCCccccChhhhc
Confidence            67899999999999999999999999999998 89999999999998             67889999999999999999


Q ss_pred             CCCCCccccCCCCccccCCCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCCCCCccccccceeccCCCeEEEEEecC
Q 045077          324 TRHKDIDVKGQNFELLPFSSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNEPLDMEEGLGLTLEKSTPLEVLVAPRL  403 (409)
Q Consensus       324 ~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  403 (409)
                      .++.   ...++..++|||+|+|+|+|+++|++|+.++|++|+++|+++..++++++..  ...++.|..++..++++|+
T Consensus       444 ~~~~---~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~pv~~~--~~~il~P~~~l~f~f~~r~  518 (519)
T KOG0159|consen  444 KPST---KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEPVEYV--YRFILVPNRPLRFKFRPRN  518 (519)
T ss_pred             cccc---CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCCccce--eEEEEcCCCCcceeeeeCC
Confidence            9873   2348899999999999999999999999999999999999999876555444  4556778889999999987


Q ss_pred             C
Q 045077          404 S  404 (409)
Q Consensus       404 ~  404 (409)
                      +
T Consensus       519 ~  519 (519)
T KOG0159|consen  519 E  519 (519)
T ss_pred             C
Confidence            4


No 19 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=2.3e-59  Score=452.74  Aligned_cols=392  Identities=25%  Similarity=0.376  Sum_probs=291.0

Q ss_pred             CCccccccccCCCCch-hHHHHHHHHHh-CCeEEEeeCCeeEEEecCHHHHHHHHHhCCCccCCc---------------
Q 045077            1 MASDGHLHLLGGREPA-HRVLDNMADKY-GPIFTIRMGINRALVVSNWEIAKECLTTHDKVFANP---------------   63 (409)
Q Consensus         1 ~P~~G~~~~~~~~~~~-~~~~~~~~~~y-G~v~~i~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~---------------   63 (409)
                      +|++||++++.. ..+ ..++.++.++| |+||++++|+.++|+|+||+++++++.+++..|+.+               
T Consensus        48 ~P~iGnl~~l~~-~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~~l~~~~~~  126 (534)
T PLN03018         48 WPILGNLPELIM-TRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIMETIGDNYKS  126 (534)
T ss_pred             CCeeccHHHhcc-CCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhhhhccCCCc
Confidence            699999999752 222 24566666666 799999999999999999999999998765444433               


Q ss_pred             ----------------hhhhc-cHHHHHHhHHhHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHHHhhHHH-----
Q 045077           64 ----------------TLELL-SNHRLEKLKNVREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFADTTRSVL-----  121 (409)
Q Consensus        64 ----------------~~~~f-s~~~l~~~~~~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi-----  121 (409)
                                      +.+.| +......+.+..+.+++.+++.+.+.   ...+ +  ++|+.+.+..++++++     
T Consensus       127 i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~-~--~vd~~~~~~~~t~~vi~~~~f  200 (534)
T PLN03018        127 MGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSM---YQRS-E--TVDVRELSRVYGYAVTMRMLF  200 (534)
T ss_pred             eEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHh---cccC-C--ceeHHHHHHHHHHHHHHHHHh
Confidence                            33443 33333344555556788888888764   3344 4  7999999999999999     


Q ss_pred             HHHHHH--------------h---hcc-cc---------cccccc-cccccccCccHHHHHHHHHHHHHHHHHHHHHHHh
Q 045077          122 LTRFFE--------------M---SGK-FV---------VSDALP-FLRWLDIGCDERSMKKIARESDIVVQGWLEEHKR  173 (409)
Q Consensus       122 G~~~~~--------------~---~~~-~~---------~~~~~p-~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  173 (409)
                      |.++..              .   ... ..         ..+.+| |+.+.+..+...+.....+.+.+++.+.++++++
T Consensus       201 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  280 (534)
T PLN03018        201 GRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIIDERVE  280 (534)
T ss_pred             CCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            443200              0   000 00         001122 2221111122233444556678888888888775


Q ss_pred             hhchhhhhcCcchHHHHHHhhccCccccCCC-ch-hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHH
Q 045077          174 KRDSQEVKKEEEDFMYVMLSILGDAEQYSGR-DV-DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELD  251 (409)
Q Consensus       174 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~-~l-~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~  251 (409)
                      ............|+++.|++...++    +. .+ ++++++++.++++||+|||+++++|++++|+.||++|+|+++|++
T Consensus       281 ~~~~~~~~~~~~d~l~~ll~~~~~~----~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~  356 (534)
T PLN03018        281 LWREKGGKAAVEDWLDTFITLKDQN----GKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELD  356 (534)
T ss_pred             HhhhccCCCCcccHHHHHHHhhccc----CCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence            4321100112469999999765432    22 37 899999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCChhhcccChhHHHHHHHHhhcCCCCccccccccccceeeccee-------------ccCCCCCCCCCCCcc
Q 045077          252 IQVGTKKQVNESDIKKLVYLQAILKEAMRLYPAVPLLVPHESIEECTVNGYH-------------LHRDPRAWEEPCKFQ  318 (409)
Q Consensus       252 ~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~-------------~~~d~~~~~dp~~F~  318 (409)
                      ++++.++.++.+++.+|||++|||+|+||++|++|...+|.+.+|++++||.             +||||++|+||++|+
T Consensus       357 ~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~  436 (534)
T PLN03018        357 EVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYE  436 (534)
T ss_pred             HHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCccccC
Confidence            9998777899999999999999999999999999998789999999999988             899999999999999


Q ss_pred             cCcccCCCCCcc---ccCCCCccccCCCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCC-CCCccccccceeccCCC
Q 045077          319 PKRFLTRHKDID---VKGQNFELLPFSSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNE-PLDMEEGLGLTLEKSTP  394 (409)
Q Consensus       319 P~R~l~~~~~~~---~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~  394 (409)
                      ||||++.++...   ....+..++|||+|+|.|+|++||++|+++++++|+++|++++.++. +++.....+.+. .+.+
T Consensus       437 PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~p~~  515 (534)
T PLN03018        437 PERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLSLEEDDASLL-MAKP  515 (534)
T ss_pred             CccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCCcccccccee-cCCC
Confidence            999997542110   11245679999999999999999999999999999999999987753 333433334444 4469


Q ss_pred             eEEEEEecCC
Q 045077          395 LEVLVAPRLS  404 (409)
Q Consensus       395 ~~v~~~~r~~  404 (409)
                      ++|++++|..
T Consensus       516 ~~v~~~~R~~  525 (534)
T PLN03018        516 LLLSVEPRLA  525 (534)
T ss_pred             eEEEEEeccc
Confidence            9999999953


No 20 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=1.1e-59  Score=453.09  Aligned_cols=389  Identities=25%  Similarity=0.363  Sum_probs=301.8

Q ss_pred             CCccccccccCC---CCchhHHHHHHHHHhCCeEEEeeCCeeEEEecCHHHHHHHHHhCCCccCCc--------------
Q 045077            1 MASDGHLHLLGG---REPAHRVLDNMADKYGPIFTIRMGINRALVVSNWEIAKECLTTHDKVFANP--------------   63 (409)
Q Consensus         1 ~P~~G~~~~~~~---~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~--------------   63 (409)
                      +|++|+.+++..   ...++.++.+|+++|||||++++|+.+.++++||+++++++.+.+..|..+              
T Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~~~~~~i   99 (489)
T PLN02936         20 IPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSEFLFGSGF   99 (489)
T ss_pred             CccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhHHHhcCcc
Confidence            699998887532   366899999999999999999999999999999999999997654344322              


Q ss_pred             --------------hhhhccHHHHHHhHH-hHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHHHhhHHH-----HH
Q 045077           64 --------------TLELLSNHRLEKLKN-VREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFADTTRSVL-----LT  123 (409)
Q Consensus        64 --------------~~~~fs~~~l~~~~~-~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi-----G~  123 (409)
                                    +.+.|+.+++..+.+ .+.++++.+++.|.+.   ..+| .  ++|+.+++..++++++     |.
T Consensus       100 ~~~~g~~wk~~Rk~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~---~~~g-~--~vd~~~~~~~~~~dvi~~~~fG~  173 (489)
T PLN02936        100 AIAEGELWTARRRAVVPSLHRRYLSVMVDRVFCKCAERLVEKLEPV---ALSG-E--AVNMEAKFSQLTLDVIGLSVFNY  173 (489)
T ss_pred             ccCCchHHHHHHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCC-C--ceeHHHHHHHHHHHHHHHHHcCC
Confidence                          778888888877654 7788899999999876   4445 5  8999999999999999     33


Q ss_pred             HHHH---------hh-c-----ccccccccccccc--cc-cCccHHHHHHHHHHHHHHHHHHHHHHHhhhchhhh-----
Q 045077          124 RFFE---------MS-G-----KFVVSDALPFLRW--LD-IGCDERSMKKIARESDIVVQGWLEEHKRKRDSQEV-----  180 (409)
Q Consensus       124 ~~~~---------~~-~-----~~~~~~~~p~l~~--l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-----  180 (409)
                      ++..         .. .     ......++|++..  +. .....++..++.+.+.+++.+.++++++..+....     
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~  253 (489)
T PLN02936        174 NFDSLTTDSPVIQAVYTALKEAETRSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAEGEVIEGE  253 (489)
T ss_pred             CccccccCcHHHHHHHHHHHHHHHhhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc
Confidence            3210         00 0     0111223343211  10 01123455667777888888888877654321100     


Q ss_pred             ---hcCcchHHHHHHhhccCccccCCCch-hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhcC
Q 045077          181 ---KKEEEDFMYVMLSILGDAEQYSGRDV-DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVGT  256 (409)
Q Consensus       181 ---~~~~~d~l~~ll~~~~~~~~~~~~~l-~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~  256 (409)
                         ++...|+++.|++...        .+ .+++.++++.+++||+|||+++++|++++|++||++|+|+++|++++++.
T Consensus       254 ~~~~~~~~d~l~~ll~~~~--------~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~  325 (489)
T PLN02936        254 EYVNDSDPSVLRFLLASRE--------EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQG  325 (489)
T ss_pred             cccccCchHHHHHHHhccc--------cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC
Confidence               1134689999986432        25 89999999999999999999999999999999999999999999999885


Q ss_pred             CCCCChhhcccChhHHHHHHHHhhcCCCCccccccccccceeeccee-------------ccCCCCCCCCCCCcccCccc
Q 045077          257 KKQVNESDIKKLVYLQAILKEAMRLYPAVPLLVPHESIEECTVNGYH-------------LHRDPRAWEEPCKFQPKRFL  323 (409)
Q Consensus       257 ~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~-------------~~~d~~~~~dp~~F~P~R~l  323 (409)
                       ..++++++++||||+|||+|+||++||++...+|.+.+|+.++||.             +||||++|+||++|+||||+
T Consensus       326 -~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl  404 (489)
T PLN02936        326 -RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERFD  404 (489)
T ss_pred             -CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCccccC
Confidence             4579999999999999999999999999998778777888888876             89999999999999999999


Q ss_pred             CCCCCccccCCCCccccCCCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCCCCCccccccceeccCCCeEEEEEecC
Q 045077          324 TRHKDIDVKGQNFELLPFSSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNEPLDMEEGLGLTLEKSTPLEVLVAPRL  403 (409)
Q Consensus       324 ~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  403 (409)
                      .++........+..++|||.|+|.|+|++||++|++++|++|+++|+++++++.++..  ..+++..++.+++|++++|.
T Consensus       405 ~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~R~  482 (489)
T PLN02936        405 LDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIVM--TTGATIHTTNGLYMTVSRRR  482 (489)
T ss_pred             CCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccce--ecceEEeeCCCeEEEEEeee
Confidence            6542111122345799999999999999999999999999999999999987654333  23456667789999999997


Q ss_pred             CCC
Q 045077          404 SAS  406 (409)
Q Consensus       404 ~~~  406 (409)
                      -.|
T Consensus       483 ~~~  485 (489)
T PLN02936        483 VPD  485 (489)
T ss_pred             CCC
Confidence            544


No 21 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=1.1e-59  Score=454.14  Aligned_cols=374  Identities=17%  Similarity=0.236  Sum_probs=283.5

Q ss_pred             CCccccccccCC---CCchhHHHHHHHHHhCCeEEEeeCCeeEEEecCHHHHHHHHHhCCCccCCc--------------
Q 045077            1 MASDGHLHLLGG---REPAHRVLDNMADKYGPIFTIRMGINRALVVSNWEIAKECLTTHDKVFANP--------------   63 (409)
Q Consensus         1 ~P~~G~~~~~~~---~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~--------------   63 (409)
                      +|++||++.+..   .+.++.++.+|+++||++|++++|++++|+++||+++++++.+++..|+++              
T Consensus        46 ~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~~~~~~~g~~~~  125 (490)
T PLN02500         46 WPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPRSIGGILGKWSM  125 (490)
T ss_pred             CCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCchHHHHHhCcccc
Confidence            599999876531   135778899999999999999999999999999999999998765444311              


Q ss_pred             --------------hhhhccHHHHHH-hHHhHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHHHhhHHHHHHHHH-
Q 045077           64 --------------TLELLSNHRLEK-LKNVREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFADTTRSVLLTRFFE-  127 (409)
Q Consensus        64 --------------~~~~fs~~~l~~-~~~~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~viG~~~~~-  127 (409)
                                    +.+.|++.+++. +.+.+.+.+..+++.|..       + .  .+|+.+.+..+++++++.-.+. 
T Consensus       126 ~~~~g~~wr~~Rk~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~-------~-~--~vd~~~~~~~~~~~vi~~~~fg~  195 (490)
T PLN02500        126 LVLVGDMHRDMRSISLNFLSHARLRTHLLKEVERHTLLVLDSWKE-------N-S--TFSAQDEAKKFTFNLMAKHIMSM  195 (490)
T ss_pred             cccCCHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCC-------C-C--CEEehHHHHHHHHHHHHHHHhCC
Confidence                          556788777765 455666666665555422       3 3  6899999999999999322100 


Q ss_pred             ------------hh-cccccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhcCcchHHHHHHhh
Q 045077          128 ------------MS-GKFVVSDALPFLRWLDIGCDERSMKKIARESDIVVQGWLEEHKRKRDSQEVKKEEEDFMYVMLSI  194 (409)
Q Consensus       128 ------------~~-~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~  194 (409)
                                  .. .........|.  .++. ...++..+..+.+.+++.+.++++++..+.+.......|+++.+++.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~  272 (490)
T PLN02500        196 DPGEEETEQLKKEYVTFMKGVVSAPL--NFPG-TAYRKALKSRATILKFIERKMEERIEKLKEEDESVEEDDLLGWVLKH  272 (490)
T ss_pred             CCCchHHHHHHHHHHHHHhhhhcchh--cCCC-cccHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcchHHHHHHhc
Confidence                        00 00000000110  1111 11345566778888899999988876443321111346899999864


Q ss_pred             ccCccccCCCch-hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhc-----CCCCCChhhcccC
Q 045077          195 LGDAEQYSGRDV-DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVG-----TKKQVNESDIKKL  268 (409)
Q Consensus       195 ~~~~~~~~~~~l-~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~-----~~~~~~~~~~~~l  268 (409)
                      .         .+ ++++++++.++++||+|||+++++|++++|++||++|+|+++|++++++     .++.++++|+++|
T Consensus       273 ~---------~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~l  343 (490)
T PLN02500        273 S---------NLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKM  343 (490)
T ss_pred             c---------CCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccC
Confidence            2         25 8999999999999999999999999999999999999999999999864     2346899999999


Q ss_pred             hhHHHHHHHHhhcCCCCccccccccccceeeccee-------------ccCCCCCCCCCCCcccCcccCCCCCccc----
Q 045077          269 VYLQAILKEAMRLYPAVPLLVPHESIEECTVNGYH-------------LHRDPRAWEEPCKFQPKRFLTRHKDIDV----  331 (409)
Q Consensus       269 p~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~-------------~~~d~~~~~dp~~F~P~R~l~~~~~~~~----  331 (409)
                      ||++|||+|++|++|++|.. +|.+.+|++++||.             +||||++|+||++|+||||+++++....    
T Consensus       344 pyl~avikEtlRl~P~~~~~-~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~  422 (490)
T PLN02500        344 EFTQCVINETLRLGNVVRFL-HRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSS  422 (490)
T ss_pred             HHHHHHHHHHHhcCCCccCe-eeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCccccccccc
Confidence            99999999999999999996 89999999999988             8999999999999999999975421110    


Q ss_pred             cCCCCccccCCCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCCCCCccccccceeccCCCeEEEEEe
Q 045077          332 KGQNFELLPFSSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNEPLDMEEGLGLTLEKSTPLEVLVAP  401 (409)
Q Consensus       332 ~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  401 (409)
                      ...+..++|||+|+|.|+|++||++|+++++++|+++|+++++++.. ... .. .+ .++.++.|++++
T Consensus       423 ~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~-~~~-~~-~~-~~~~~l~~~~~~  488 (490)
T PLN02500        423 SATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQ-AFA-FP-FV-DFPKGLPIRVRR  488 (490)
T ss_pred             CCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCc-cee-cc-cc-cCCCCceEEEEe
Confidence            12456899999999999999999999999999999999999987543 222 11 22 334699999875


No 22 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=3e-59  Score=454.06  Aligned_cols=385  Identities=19%  Similarity=0.267  Sum_probs=288.5

Q ss_pred             CCccccccccCCCCchhHHHHHHHHHh---CCeEEEeeCCeeEEEecCHHHHHHHHHhCCCccCCc--------------
Q 045077            1 MASDGHLHLLGGREPAHRVLDNMADKY---GPIFTIRMGINRALVVSNWEIAKECLTTHDKVFANP--------------   63 (409)
Q Consensus         1 ~P~~G~~~~~~~~~~~~~~~~~~~~~y---G~v~~i~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~--------------   63 (409)
                      +|++||++.+.  .+ +..+.+|.++|   |++|++++|+.+.++++||+++++++.++...|..+              
T Consensus        38 ~p~~G~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~g~~  114 (516)
T PLN03195         38 WPIIGAALEQL--KN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEVLLGDG  114 (516)
T ss_pred             CCeecchHHHH--hc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHHHHhcCe
Confidence            59999997765  33 44567888888   899999999999999999999999997653222221              


Q ss_pred             ---------------hhhhccHHHHHHhHHhH-HHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHHHhhHHH-----H
Q 045077           64 ---------------TLELLSNHRLEKLKNVR-EYELKTCLKELYELWNKNKSTDKLLLVEMKRWFADTTRSVL-----L  122 (409)
Q Consensus        64 ---------------~~~~fs~~~l~~~~~~~-~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi-----G  122 (409)
                                     +++.|+.++++.+.+.+ .+.++.+++.+.+.   ..+| +  ++|+.+++..++++++     |
T Consensus       115 l~~~~g~~w~~~Rr~l~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~---~~~~-~--~vd~~~~~~~~~~dvi~~~~fG  188 (516)
T PLN03195        115 IFNVDGELWRKQRKTASFEFASKNLRDFSTVVFREYSLKLSSILSQA---SFAN-Q--VVDMQDLFMRMTLDSICKVGFG  188 (516)
T ss_pred             eeccCcHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcC-C--eEcHHHHHHHHHHHHHHHHHhC
Confidence                           77889999999998876 66677777777653   3344 4  7999999999999999     3


Q ss_pred             HHHHHh------------hccc---c-cccccccc--cccccCccHHHHHHHHHHHHHHHHHHHHHHHhhhchhh--hhc
Q 045077          123 TRFFEM------------SGKF---V-VSDALPFL--RWLDIGCDERSMKKIARESDIVVQGWLEEHKRKRDSQE--VKK  182 (409)
Q Consensus       123 ~~~~~~------------~~~~---~-~~~~~p~l--~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~  182 (409)
                      .++...            ....   . .....|+.  .........+...+..+.+.+++.+.+++++++...++  .+.
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  268 (516)
T PLN03195        189 VEIGTLSPSLPENPFAQAFDTANIIVTLRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEARKSGKK  268 (516)
T ss_pred             CCccccccCCCccHHHHHHHHHHHHHHHHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence            322100            0000   0 00011211  11100111234455677788888888888776432210  011


Q ss_pred             CcchHHHHHHhhccCccccCCCch-hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhcC-----
Q 045077          183 EEEDFMYVMLSILGDAEQYSGRDV-DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVGT-----  256 (409)
Q Consensus       183 ~~~d~l~~ll~~~~~~~~~~~~~l-~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~-----  256 (409)
                      ...|+++.+++...++    +..+ +++++++++++++||+|||+++++|++++|++||++|+|+++|++++++.     
T Consensus       269 ~~~d~l~~ll~~~~~~----~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~  344 (516)
T PLN03195        269 VKHDILSRFIELGEDP----DSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEE  344 (516)
T ss_pred             ccccHHHHHHhccCCC----CCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccccc
Confidence            3468999999754322    2247 89999999999999999999999999999999999999999999987642     


Q ss_pred             ---------------CCCCChhhcccChhHHHHHHHHhhcCCCCccccccccccceee-ccee-------------ccCC
Q 045077          257 ---------------KKQVNESDIKKLVYLQAILKEAMRLYPAVPLLVPHESIEECTV-NGYH-------------LHRD  307 (409)
Q Consensus       257 ---------------~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~-------------~~~d  307 (409)
                                     ++.++++++.+||||+|||+|+||++||+|.. +|.+.+|.++ +|+.             +|||
T Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~-~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~d  423 (516)
T PLN03195        345 DPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD-PKGILEDDVLPDGTKVKAGGMVTYVPYSMGRM  423 (516)
T ss_pred             cccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch-hhhhccCcCcCCCcEECCCCEEEEehHhhccC
Confidence                           24589999999999999999999999999998 6767776555 7876             8999


Q ss_pred             CCCC-CCCCCcccCcccCCCCCccccCCCCccccCCCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCCCCCcccccc
Q 045077          308 PRAW-EEPCKFQPKRFLTRHKDIDVKGQNFELLPFSSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNEPLDMEEGLG  386 (409)
Q Consensus       308 ~~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~  386 (409)
                      |++| +||++|+||||+++..  .....+..++|||+|+|+|+|++||++|++++++.|+++|+++++++.+...  ...
T Consensus       424 p~~~g~dP~~F~PeRwl~~~~--~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~--~~~  499 (516)
T PLN03195        424 EYNWGPDAASFKPERWIKDGV--FQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHPVKY--RMM  499 (516)
T ss_pred             hhhhccChhhcCCcccCCCCC--cCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCccee--eee
Confidence            9999 9999999999996431  0112456799999999999999999999999999999999999876544332  233


Q ss_pred             ceeccCCCeEEEEEecC
Q 045077          387 LTLEKSTPLEVLVAPRL  403 (409)
Q Consensus       387 ~~~~~~~~~~v~~~~r~  403 (409)
                      .+..++.+++|++++|.
T Consensus       500 ~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        500 TILSMANGLKVTVSRRS  516 (516)
T ss_pred             eEEecCCCEEEEEEeCC
Confidence            45667889999999884


No 23 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=5.9e-59  Score=448.13  Aligned_cols=386  Identities=19%  Similarity=0.283  Sum_probs=288.7

Q ss_pred             CCccccccccCC-CCchhHHHHHHHHHhCCeEE---EeeCCeeEEEecCHHHHHHHHHhCCCccCCc-------------
Q 045077            1 MASDGHLHLLGG-REPAHRVLDNMADKYGPIFT---IRMGINRALVVSNWEIAKECLTTHDKVFANP-------------   63 (409)
Q Consensus         1 ~P~~G~~~~~~~-~~~~~~~~~~~~~~yG~v~~---i~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~-------------   63 (409)
                      +|++||+..+.+ ....++++.+...+||..++   +|+|+.++|+|+||+.+++|+.++...|.++             
T Consensus        39 ~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~~~~~g~g  118 (500)
T PLN02169         39 WPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKIFDVLGEG  118 (500)
T ss_pred             CCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHHHHhhcCc
Confidence            589999987753 12344555555556887666   6789999999999999999998765554433             


Q ss_pred             ---------------hhhhccHHHHHH--hHHhHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHHHhhHHH-----
Q 045077           64 ---------------TLELLSNHRLEK--LKNVREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFADTTRSVL-----  121 (409)
Q Consensus        64 ---------------~~~~fs~~~l~~--~~~~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi-----  121 (409)
                                     +.+.|+..++..  +.+.+.+.++.+++.+.+.   ..+| .  .+|+.+.+..+++|++     
T Consensus       119 l~~~~g~~Wr~~Rk~l~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~-~--~vd~~~~~~~~t~dvi~~~~f  192 (500)
T PLN02169        119 ILTVDFELWEDLRKSNHALFHNQDFIELSLSSNKSKLKEGLVPFLDNA---AHEN-I--IIDLQDVFMRFMFDTSSILMT  192 (500)
T ss_pred             ccccCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcC-C--eEeHHHHHHHHHHHHHHhhee
Confidence                           788888887653  3466667778888888664   4445 5  7999999999999999     


Q ss_pred             HHHHHH------------hh----cccccccccccccc-c---ccCccHHHHHHHHHHHHHHHHHHHHHHHhhhch-hhh
Q 045077          122 LTRFFE------------MS----GKFVVSDALPFLRW-L---DIGCDERSMKKIARESDIVVQGWLEEHKRKRDS-QEV  180 (409)
Q Consensus       122 G~~~~~------------~~----~~~~~~~~~p~l~~-l---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~  180 (409)
                      |.+...            ..    .......+.|++.+ +   ...+..++..+..+.+++++.+.|+++++.... .+.
T Consensus       193 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~~~  272 (500)
T PLN02169        193 GYDPMSLSIEMLEVEFGEAADIGEEAIYYRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRRKEEISRAET  272 (500)
T ss_pred             CCCccccCCCCCCCHHHHHHHHHHHHHHhHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence            432200            00    00011123353221 1   112345667788889999999999988764211 100


Q ss_pred             hcCcchHHHHHHhhccCccccCCCch-hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhcCCCC
Q 045077          181 KKEEEDFMYVMLSILGDAEQYSGRDV-DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVGTKKQ  259 (409)
Q Consensus       181 ~~~~~d~l~~ll~~~~~~~~~~~~~l-~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~  259 (409)
                      ++...|+++.+++..... ...+..+ ++++.+++.++++||+|||+++++|++++|+.||++|+|+++|+++++     
T Consensus       273 ~~~~~d~l~~ll~~~~~~-~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~-----  346 (500)
T PLN02169        273 EPYSKDALTYYMNVDTSK-YKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF-----  346 (500)
T ss_pred             cCCCcCHHHHHHhccccc-cccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC-----
Confidence            112368999999754221 0001235 788999999999999999999999999999999999999999998863     


Q ss_pred             CChhhcccChhHHHHHHHHhhcCCCCcccccccccccee-eccee-------------ccCCCCCC-CCCCCcccCcccC
Q 045077          260 VNESDIKKLVYLQAILKEAMRLYPAVPLLVPHESIEECT-VNGYH-------------LHRDPRAW-EEPCKFQPKRFLT  324 (409)
Q Consensus       260 ~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~-~~g~~-------------~~~d~~~~-~dp~~F~P~R~l~  324 (409)
                       +.+++.+||||+|||+|+||++|++|+. .|.+.+|.+ ++|+.             +||||++| +||++|+||||++
T Consensus       347 -~~~dl~~L~Yl~avi~EtLRl~P~vp~~-~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~  424 (500)
T PLN02169        347 -DNEDLEKLVYLHAALSESMRLYPPLPFN-HKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPERWIS  424 (500)
T ss_pred             -CHHHHhcCHHHHHHHHHHHhcCCCCCcC-ceecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCccccCC
Confidence             6789999999999999999999999998 566666644 58876             89999999 8999999999997


Q ss_pred             CCCCccccCCCCccccCCCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCCCCCccccccceeccCCCeEEEEEecC
Q 045077          325 RHKDIDVKGQNFELLPFSSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNEPLDMEEGLGLTLEKSTPLEVLVAPRL  403 (409)
Q Consensus       325 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  403 (409)
                      +++... ...+..|+|||+|+|+|+|++||++|+++++++|+++|+++++++.++  ....+.++.++.++++++++|.
T Consensus       425 ~~~~~~-~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~~--~~~~~~~l~~~~gl~l~l~~~~  500 (500)
T PLN02169        425 DNGGLR-HEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKI--EAIPSILLRMKHGLKVTVTKKI  500 (500)
T ss_pred             CCCCcc-CCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCCc--ccccceEEecCCCEEEEEEeCC
Confidence            643110 113678999999999999999999999999999999999999865433  3344567888899999999883


No 24 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=4.8e-59  Score=445.26  Aligned_cols=371  Identities=17%  Similarity=0.217  Sum_probs=281.1

Q ss_pred             CCccccccccCC---CCchhHHHHHHHHHhCCeEEEeeCCeeEEEecCHHHHHHHHHhCCCccCCc--------------
Q 045077            1 MASDGHLHLLGG---REPAHRVLDNMADKYGPIFTIRMGINRALVVSNWEIAKECLTTHDKVFANP--------------   63 (409)
Q Consensus         1 ~P~~G~~~~~~~---~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~--------------   63 (409)
                      +|++||++++..   ..+++.++.+|+++||+||++++|+.++||++||+++++++.+++..|+.+              
T Consensus        15 ~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~~~~~~l~g~~~~   94 (452)
T PLN03141         15 WPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYPKSLTELMGKSSI   94 (452)
T ss_pred             CCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCchhHHHHhCcccc
Confidence            699999998732   146889999999999999999999999999999999999998776554432              


Q ss_pred             --------------hhhhccHHHHHHh-HHhHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHHHhhHHH-----HH
Q 045077           64 --------------TLELLSNHRLEKL-KNVREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFADTTRSVL-----LT  123 (409)
Q Consensus        64 --------------~~~~fs~~~l~~~-~~~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi-----G~  123 (409)
                                    +.+.|+..++..+ .+.+.+.++++++.+       .++ .  .+|+.+.+..++++++     |.
T Consensus        95 ~~~~g~~wr~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-------~~~-~--~~~~~~~~~~~~~~vi~~~~~G~  164 (452)
T PLN03141         95 LLINGSLQRRVHGLIGAFLKSPHLKAQITRDMERYVSESLDSW-------RDD-P--PVLVQDETKKIAFEVLVKALISL  164 (452)
T ss_pred             cccCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhc-------cCC-C--CEEhHHHHHHHHHHHHHHHHcCC
Confidence                          3344444444331 223333333333322       123 4  7899999999999998     32


Q ss_pred             H----HHHh---hc-ccccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHhhhchhhh--hcCcchHHHHHHh
Q 045077          124 R----FFEM---SG-KFVVSDALPFLRWLDIGCDERSMKKIARESDIVVQGWLEEHKRKRDSQEV--KKEEEDFMYVMLS  193 (409)
Q Consensus       124 ~----~~~~---~~-~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~d~l~~ll~  193 (409)
                      +    ....   .. .......+|+  .++.. ...+..++.+.+.+++.++++++++....+..  .....|+++.+++
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~-~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~  241 (452)
T PLN03141        165 EPGEEMEFLKKEFQEFIKGLMSLPI--KLPGT-RLYRSLQAKKRMVKLVKKIIEEKRRAMKNKEEDETGIPKDVVDVLLR  241 (452)
T ss_pred             CchHHHHHHHHHHHHHhhhHHhCcc--CCCch-HhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhHHHHHHh
Confidence            1    1100   00 0011111221  11111 12344567788899999999888765322100  0124689999987


Q ss_pred             hccCccccCCCch-hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhc----CCCCCChhhcccC
Q 045077          194 ILGDAEQYSGRDV-DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVG----TKKQVNESDIKKL  268 (409)
Q Consensus       194 ~~~~~~~~~~~~l-~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~----~~~~~~~~~~~~l  268 (409)
                      ...       ..+ +++++.++..+++||+|||+++++|++++|+.||++|+++++|++++++    .++.++.+++.+|
T Consensus       242 ~~~-------~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~l  314 (452)
T PLN03141        242 DGS-------DELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSL  314 (452)
T ss_pred             cCC-------CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhcc
Confidence            542       146 8999999999999999999999999999999999999999999998763    2456899999999


Q ss_pred             hhHHHHHHHHhhcCCCCccccccccccceeeccee-------------ccCCCCCCCCCCCcccCcccCCCCCccccCCC
Q 045077          269 VYLQAILKEAMRLYPAVPLLVPHESIEECTVNGYH-------------LHRDPRAWEEPCKFQPKRFLTRHKDIDVKGQN  335 (409)
Q Consensus       269 p~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~-------------~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~  335 (409)
                      ||++|||+|++|++|+++.. +|.+.+|++++||.             +|||+++|+||++|+||||++.+      ..+
T Consensus       315 pyl~avi~E~lRl~p~~~~~-~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~------~~~  387 (452)
T PLN03141        315 PFTQNVITETLRMGNIINGV-MRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKD------MNN  387 (452)
T ss_pred             HHHHHHHHHHHhccCCcCCc-ceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCC------CCC
Confidence            99999999999999999865 89999999999988             89999999999999999999754      235


Q ss_pred             CccccCCCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCCCCCccccccceeccCCCeEEEEEecC
Q 045077          336 FELLPFSSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNEPLDMEEGLGLTLEKSTPLEVLVAPRL  403 (409)
Q Consensus       336 ~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  403 (409)
                      ..++|||+|+|+|+|++||++|++++++.|+++|++++.++...   .  ..++.|..++.|++++|+
T Consensus       388 ~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~  450 (452)
T PLN03141        388 SSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTIV---N--FPTVRMKRKLPIWVTRID  450 (452)
T ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCee---e--cccccCCCCceEEEEeCC
Confidence            67999999999999999999999999999999999998765321   1  236677789999999995


No 25 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.2e-58  Score=409.53  Aligned_cols=377  Identities=20%  Similarity=0.298  Sum_probs=298.3

Q ss_pred             CCccccccccCCCCchhHHHHHHHHHhCCeEEEeeCCeeEEEecCHHHHHHHHHhCCCc--------------cCCc---
Q 045077            1 MASDGHLHLLGGREPAHRVLDNMADKYGPIFTIRMGINRALVVSNWEIAKECLTTHDKV--------------FANP---   63 (409)
Q Consensus         1 ~P~~G~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~d~~~~~~vl~~~~~~--------------~~~~---   63 (409)
                      |||+|++..++  ++|..++++.++|||+||++.++|+.+.++.||+....++..+...              |+.+   
T Consensus        40 iP~lG~a~~fg--k~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~vFg~~v~~  117 (486)
T KOG0684|consen   40 IPWLGSALAFG--KDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPVFGKGVVY  117 (486)
T ss_pred             cchhhHHHHhc--cCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhhcCCCccc
Confidence            79999999999  8999999999999999999999999999999999999999765221              2211   


Q ss_pred             -------------hhhhccHHHHHHhHHhHHHHHHHHHHH-HHHHhhhccCCCchhhHHHHHHHHHHhhHHH----HHHH
Q 045077           64 -------------TLELLSNHRLEKLKNVREYELKTCLKE-LYELWNKNKSTDKLLLVEMKRWFADTTRSVL----LTRF  125 (409)
Q Consensus        64 -------------~~~~fs~~~l~~~~~~~~~~~~~ll~~-l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi----G~~~  125 (409)
                                   +..++...+++.+++.|.+++++.++. +.+      +| .  ...+.++...+++.+.    |.+.
T Consensus       118 d~~~~~~~e~~~~~k~~L~~~~lk~~~e~m~~el~~~f~~~~~~------s~-~--~d~l~~~~~~ii~tAs~~ll~~e~  188 (486)
T KOG0684|consen  118 DVPNHVMMEQKKFFKSALGGVALKSLVELMLEELHAYFETSLGE------SG-E--TDGLYTFCRLIIFTASRLLLGGEV  188 (486)
T ss_pred             cCCCchHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhccccc------cc-c--hhHhhhhhHHHhhhhHHHhhhhhh
Confidence                         455667777888888888888887776 322      34 3  4444555555554444    3222


Q ss_pred             ------------HHhhc-ccccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhcCcchHHHHHH
Q 045077          126 ------------FEMSG-KFVVSDALPFLRWLDIGCDERSMKKIARESDIVVQGWLEEHKRKRDSQEVKKEEEDFMYVML  192 (409)
Q Consensus       126 ------------~~~~~-~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll  192 (409)
                                  .+... ...+...||.  ++|... .++..++.+++...+.+.+.++++..+.     .+.|+++.++
T Consensus       189 r~~~d~~~a~l~~dLd~~F~~~d~~FP~--~LP~~~-~r~~~ra~~~i~k~f~~~i~~rr~s~s~-----~~~dmlq~l~  260 (486)
T KOG0684|consen  189 RDQLDADVAKLYHDLDQGFQPFDFLFPY--NLPIPL-LRRRDRARKKISKIFSKIILDRRASISK-----WDNDMLQSLM  260 (486)
T ss_pred             hhhhcchHHHHHHHHhccccchHhhccc--CCCcch-hhhHHHHHHHHHHHHHHHHHHHHhcccc-----ccHHHHHHHH
Confidence                        11122 2223344553  343332 4666688889999999999988876543     4568999998


Q ss_pred             hhccCccccCCCch-hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhcCCC-CCChhhcccChh
Q 045077          193 SILGDAEQYSGRDV-DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVGTKK-QVNESDIKKLVY  270 (409)
Q Consensus       193 ~~~~~~~~~~~~~l-~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~-~~~~~~~~~lp~  270 (409)
                      + ..++    +.+. ++++....+.+++||+.||+.|.+|++++|++|||+++.+++|+.+++|+.. +++.++++++|.
T Consensus       261 ~-~y~d----g~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~L~~lpl  335 (486)
T KOG0684|consen  261 E-KYKD----GRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQLKDLPL  335 (486)
T ss_pred             H-Hhhc----CCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHHHhcchH
Confidence            8 3232    5567 8999999999999999999999999999999999999999999999999764 499999999999


Q ss_pred             HHHHHHHHhhcCCCCccccccccccceeecc----ee-------------ccCCCCCCCCCCCcccCcccCCCCCcc--c
Q 045077          271 LQAILKEAMRLYPAVPLLVPHESIEECTVNG----YH-------------LHRDPRAWEEPCKFQPKRFLTRHKDID--V  331 (409)
Q Consensus       271 l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g----~~-------------~~~d~~~~~dp~~F~P~R~l~~~~~~~--~  331 (409)
                      |++||+|||||+||.+.. .|.+.+|.++.+    |.             +||||++|+||+.|+|+||+.++++..  .
T Consensus       336 L~~~IkEtLRL~~p~~~~-~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g  414 (486)
T KOG0684|consen  336 LDSCIKETLRLHPPAHSL-MRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNG  414 (486)
T ss_pred             HHHHHHHHHhcCCchhhH-HHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCccccccc
Confidence            999999999999999998 699999999987    33             899999999999999999998775332  2


Q ss_pred             cCCCCccccCCCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCCCCCccccccceeccCCCeEEEEEecC
Q 045077          332 KGQNFELLPFSSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNEPLDMEEGLGLTLEKSTPLEVLVAPRL  403 (409)
Q Consensus       332 ~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  403 (409)
                      ..-...+||||+|+|.|||++||.+|++.++..+|++||+++.+|..++... ...++.|..+++++.+.|+
T Consensus       415 ~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d~-s~~v~~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  415 EKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVDY-SRMVMQPEGDVRIRYKRRP  485 (486)
T ss_pred             ccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCCH-HHhhcCCCCCceEEEeecC
Confidence            2234457999999999999999999999999999999999999873222322 2347788899999998875


No 26 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=8.6e-59  Score=444.57  Aligned_cols=365  Identities=17%  Similarity=0.214  Sum_probs=283.1

Q ss_pred             CCccccccccCCCCchhHHHHHHHHHhCCeEEEeeCCeeEEEecCHHHHHHHHHhCCCccCCc-----------------
Q 045077            1 MASDGHLHLLGGREPAHRVLDNMADKYGPIFTIRMGINRALVVSNWEIAKECLTTHDKVFANP-----------------   63 (409)
Q Consensus         1 ~P~~G~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~-----------------   63 (409)
                      +|++||++.+.  ++++.++.+|+++||++|++++|++++++++||+++++++.++...|..+                 
T Consensus        39 ~P~~G~~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~lg~~~~~~~  116 (463)
T PLN02774         39 WPLFGETTEFL--KQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLDILGTCNIAAV  116 (463)
T ss_pred             CCchhhHHHHH--HhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHHHhCccchhhc
Confidence            58999998886  56778999999999999999999999999999999999997655433211                 


Q ss_pred             -----------hhhhccHHHHHH-hHHhHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHHHhhHHH-----HHHH-
Q 045077           64 -----------TLELLSNHRLEK-LKNVREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFADTTRSVL-----LTRF-  125 (409)
Q Consensus        64 -----------~~~~fs~~~l~~-~~~~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi-----G~~~-  125 (409)
                                 +.+.|++..++. +.+.+.+.++++++.|..       + +  ++|+.+.+..++++++     |... 
T Consensus       117 ~g~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~--~v~~~~~~~~~~~~~~~~~~~g~~~~  186 (463)
T PLN02774        117 HGSTHRYMRGSLLSLISPTMIRDHLLPKIDEFMRSHLSGWDG-------L-K--TIDIQEKTKEMALLSALKQIAGTLSK  186 (463)
T ss_pred             CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhCC-------C-C--CEEeeHHHHHHHHHHHHHHHcCCCCh
Confidence                       556788887765 677777777777766532       2 3  6888888888888877     2211 


Q ss_pred             ---HHhh----cccccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhcCcchHHHHHHhhccCc
Q 045077          126 ---FEMS----GKFVVSDALPFLRWLDIGCDERSMKKIARESDIVVQGWLEEHKRKRDSQEVKKEEEDFMYVMLSILGDA  198 (409)
Q Consensus       126 ---~~~~----~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~  198 (409)
                         ....    ........+|  .+++.. ..++..++.+.+.+++.+.++++++..      ...+|+++.+++...+ 
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~--~~lp~~-~~~~~~~~~~~~~~~~~~~i~~r~~~~------~~~~d~l~~ll~~~~~-  256 (463)
T PLN02774        187 PISEEFKTEFFKLVLGTLSLP--IDLPGT-NYRSGVQARKNIVRMLRQLIQERRASG------ETHTDMLGYLMRKEGN-  256 (463)
T ss_pred             HHHHHHHHHHHHHhcccccCC--cCCCCh-hhhHHHHHHHHHHHHHHHHHHHHHhcC------CCcccHHHHHHhCccC-
Confidence               0000    0000000111  112111 234555677788888888888876431      2346999999974322 


Q ss_pred             cccCCCch-hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhcC---CCCCChhhcccChhHHHH
Q 045077          199 EQYSGRDV-DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVGT---KKQVNESDIKKLVYLQAI  274 (409)
Q Consensus       199 ~~~~~~~l-~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~---~~~~~~~~~~~lp~l~a~  274 (409)
                          +..+ ++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++.   ++.++++++++|||++||
T Consensus       257 ----~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~  332 (463)
T PLN02774        257 ----RYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAV  332 (463)
T ss_pred             ----CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHH
Confidence                2246 89999999999999999999999999999999999999999999999863   356899999999999999


Q ss_pred             HHHHhhcCCCCccccccccccceeeccee-------------ccCCCCCCCCCCCcccCcccCCCCCccccCCCCccccC
Q 045077          275 LKEAMRLYPAVPLLVPHESIEECTVNGYH-------------LHRDPRAWEEPCKFQPKRFLTRHKDIDVKGQNFELLPF  341 (409)
Q Consensus       275 i~E~lRl~p~~~~~~~R~~~~d~~~~g~~-------------~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~F  341 (409)
                      |+|+||++|+++.. +|.+.+|++++||.             +||||++|+||++|+||||++.+.    . ....++||
T Consensus       333 ikE~lRl~P~v~~~-~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~----~-~~~~~lpF  406 (463)
T PLN02774        333 IFETSRLATIVNGV-LRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSL----E-SHNYFFLF  406 (463)
T ss_pred             HHHHHhcCCCCCCc-ccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCc----C-CCccccCc
Confidence            99999999999976 79999999999988             899999999999999999996541    1 12359999


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCCCCCccccccceeccCCCeEEEEEe
Q 045077          342 SSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNEPLDMEEGLGLTLEKSTPLEVLVAP  401 (409)
Q Consensus       342 g~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  401 (409)
                      |+|+|+|+|+++|++|++++++.|+++|++++.++.+..  ...  +..|+.+++|+++|
T Consensus       407 G~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~~--~~~--~~~p~~g~~~~~~~  462 (463)
T PLN02774        407 GGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKLM--KFP--RVEAPNGLHIRVSP  462 (463)
T ss_pred             CCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCccc--cCC--CCCCCCCceEEeee
Confidence            999999999999999999999999999999998764321  122  23366899999873


No 27 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=3.5e-58  Score=440.10  Aligned_cols=362  Identities=17%  Similarity=0.255  Sum_probs=291.5

Q ss_pred             CCccccccccCCCCchhHHHHHHHHHhCCeEEEeeCCeeEEEecCHHHHHHHHHhCCCccCCc-----------------
Q 045077            1 MASDGHLHLLGGREPAHRVLDNMADKYGPIFTIRMGINRALVVSNWEIAKECLTTHDKVFANP-----------------   63 (409)
Q Consensus         1 ~P~~G~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~-----------------   63 (409)
                      +|++||++++.. ++++.++.+++++||++|++++++.++|+++||+++++++.++...|...                 
T Consensus        43 ~P~iG~~~~~~~-~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~~~~~~~~~~~~g~~~l~~~  121 (463)
T PLN02196         43 WPYVGETFQLYS-QDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPTFPASKERMLGKQAIFFH  121 (463)
T ss_pred             CCccchHHHHHh-cCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCcccccCchHHHHHcCccccccc
Confidence            599999988643 68899999999999999999999999999999999999998765444211                 


Q ss_pred             -----------hhhhccHHHHHHhHHhHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHHHhhHHH-----HHHH--
Q 045077           64 -----------TLELLSNHRLEKLKNVREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFADTTRSVL-----LTRF--  125 (409)
Q Consensus        64 -----------~~~~fs~~~l~~~~~~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi-----G~~~--  125 (409)
                                 +.+.|++++++.+.+.+.+.++++++.|.        + +  .+|+.+++..++++++     |.+.  
T Consensus       122 ~g~~w~~~Rk~l~~~f~~~~l~~~~~~i~~~~~~~~~~~~--------~-~--~v~~~~~~~~~~~~v~~~~~fG~~~~~  190 (463)
T PLN02196        122 QGDYHAKLRKLVLRAFMPDAIRNMVPDIESIAQESLNSWE--------G-T--QINTYQEMKTYTFNVALLSIFGKDEVL  190 (463)
T ss_pred             CcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHcCC--------C-C--eEEeHHHHHHHHHHHHHHHHcCCCCch
Confidence                       77889999999999999999888887662        2 3  6888999999999988     4321  


Q ss_pred             --HHhhccc----ccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhcCcchHHHHHHhhccCcc
Q 045077          126 --FEMSGKF----VVSDALPFLRWLDIGCDERSMKKIARESDIVVQGWLEEHKRKRDSQEVKKEEEDFMYVMLSILGDAE  199 (409)
Q Consensus       126 --~~~~~~~----~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~  199 (409)
                        .......    .....+|+.  ++. ...++..++.+.+.+++.+.++++++..      ....|+++.+++..    
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~--~p~-~~~~~~~~a~~~~~~~~~~~i~~~~~~~------~~~~d~l~~ll~~~----  257 (463)
T PLN02196        191 YREDLKRCYYILEKGYNSMPIN--LPG-TLFHKSMKARKELAQILAKILSKRRQNG------SSHNDLLGSFMGDK----  257 (463)
T ss_pred             HHHHHHHHHHHHhcchhccccc--CCC-ccchHHHHHHHHHHHHHHHHHHHHhhcC------CCcccHHHHHHhcC----
Confidence              0000000    011122321  111 1235566777888888888888776531      23468999988521    


Q ss_pred             ccCCCch-hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhcC---CCCCChhhcccChhHHHHH
Q 045077          200 QYSGRDV-DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVGT---KKQVNESDIKKLVYLQAIL  275 (409)
Q Consensus       200 ~~~~~~l-~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~---~~~~~~~~~~~lp~l~a~i  275 (409)
                          ..+ ++++..+++.+++||+|||+++++|++++|++||++|+|+++|++++.+.   ++.++++++.+|||++|||
T Consensus       258 ----~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi  333 (463)
T PLN02196        258 ----EGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVI  333 (463)
T ss_pred             ----CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHH
Confidence                146 89999999999999999999999999999999999999999999998863   3568999999999999999


Q ss_pred             HHHhhcCCCCccccccccccceeeccee-------------ccCCCCCCCCCCCcccCcccCCCCCccccCCCCccccCC
Q 045077          276 KEAMRLYPAVPLLVPHESIEECTVNGYH-------------LHRDPRAWEEPCKFQPKRFLTRHKDIDVKGQNFELLPFS  342 (409)
Q Consensus       276 ~E~lRl~p~~~~~~~R~~~~d~~~~g~~-------------~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~Fg  342 (409)
                      +|++|++|++++. .|.+.+|++++||.             +|||+++|+||++|+||||+...       .+..++|||
T Consensus       334 ~EtlRl~p~~~~~-~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~-------~~~~~lpFG  405 (463)
T PLN02196        334 QETLRVASILSFT-FREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP-------KPNTFMPFG  405 (463)
T ss_pred             HHHHhcCCCcccc-ceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC-------CCCcccCcC
Confidence            9999999999998 69999999999988             89999999999999999999643       356899999


Q ss_pred             CCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCCCCCccccccceeccCCCeEEEEEec
Q 045077          343 SGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNEPLDMEEGLGLTLEKSTPLEVLVAPR  402 (409)
Q Consensus       343 ~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  402 (409)
                      +|+|.|+|+++|++|++++++.|+++|+++++++. .++.  ...+..|+.+++|+++.+
T Consensus       406 ~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~-~~~~--~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        406 NGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS-NGIQ--YGPFALPQNGLPIALSRK  462 (463)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC-CceE--EcccccCCCCceEEEecC
Confidence            99999999999999999999999999999987643 2333  333456888999998754


No 28 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=7.3e-57  Score=436.01  Aligned_cols=375  Identities=19%  Similarity=0.287  Sum_probs=293.4

Q ss_pred             CCccccccccCC---CCchhHHHHHHHHHhCC--eEEEeeCCeeEEEecCHHHHHHHHHhCCCccCCc------------
Q 045077            1 MASDGHLHLLGG---REPAHRVLDNMADKYGP--IFTIRMGINRALVVSNWEIAKECLTTHDKVFANP------------   63 (409)
Q Consensus         1 ~P~~G~~~~~~~---~~~~~~~~~~~~~~yG~--v~~i~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~------------   63 (409)
                      +|++||++++..   ..+++.++.+++++||+  +|++++++.+.|+++||+++++++.+++ .|.++            
T Consensus        50 ~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~-~f~~~~~~~~~~~~g~~  128 (490)
T PLN02302         50 WPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDD-AFEPGWPESTVELIGRK  128 (490)
T ss_pred             CCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCC-ccccCCchhHHHHhccc
Confidence            599999988731   25789999999999997  7999999999999999999999997653 22211            


Q ss_pred             ----------------hhhhc-cHHHHHHhHHhHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHHHhhHHH-----
Q 045077           64 ----------------TLELL-SNHRLEKLKNVREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFADTTRSVL-----  121 (409)
Q Consensus        64 ----------------~~~~f-s~~~l~~~~~~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi-----  121 (409)
                                      +.+.| ++++++.+.+.+.+.++++++.+..      ++    .+|+.+.+..++++++     
T Consensus       129 ~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~------~~----~v~~~~~~~~~~~~vi~~~~~  198 (490)
T PLN02302        129 SFVGITGEEHKRLRRLTAAPVNGPEALSTYIPYIEENVKSCLEKWSK------MG----EIEFLTELRKLTFKIIMYIFL  198 (490)
T ss_pred             cccccCcHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHhcC------CC----CEehHHHHHHHHHHHHHHHHc
Confidence                            66777 4678889999999999988887743      24    6899999999999998     


Q ss_pred             HHHH----HHhhcccc----cccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhcCcchHHHHHHh
Q 045077          122 LTRF----FEMSGKFV----VSDALPFLRWLDIGCDERSMKKIARESDIVVQGWLEEHKRKRDSQEVKKEEEDFMYVMLS  193 (409)
Q Consensus       122 G~~~----~~~~~~~~----~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~  193 (409)
                      |.++    ........    ....++.  .++.. ...+..+..+.+.+++.+.++++++....+. ..+..|+++.+++
T Consensus       199 G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~-~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~-~~~~~d~l~~ll~  274 (490)
T PLN02302        199 SSESELVMEALEREYTTLNYGVRAMAI--NLPGF-AYHRALKARKKLVALFQSIVDERRNSRKQNI-SPRKKDMLDLLLD  274 (490)
T ss_pred             CCCChHHHHHHHHHHHHHHHHhhhCCc--CCCch-hhHHHHHHHHHHHHHHHHHHHHHHHhhhccC-CCCcCCHHHHHHh
Confidence            3221    00000000    0001110  11111 1234455667788888888888875433210 1245699999998


Q ss_pred             hccCccccCCCch-hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhcCC----CCCChhhcccC
Q 045077          194 ILGDAEQYSGRDV-DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVGTK----KQVNESDIKKL  268 (409)
Q Consensus       194 ~~~~~~~~~~~~l-~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~----~~~~~~~~~~l  268 (409)
                      ...++    +..+ +++++.++..+++||+|||+++++|++++|++||++|+|+++|++++++..    ..++++++++|
T Consensus       275 ~~~~~----~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~l  350 (490)
T PLN02302        275 AEDEN----GRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKM  350 (490)
T ss_pred             hhccC----CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcC
Confidence            65432    3346 899999999999999999999999999999999999999999999988642    23799999999


Q ss_pred             hhHHHHHHHHhhcCCCCccccccccccceeeccee-------------ccCCCCCCCCCCCcccCcccCCCCCccccCCC
Q 045077          269 VYLQAILKEAMRLYPAVPLLVPHESIEECTVNGYH-------------LHRDPRAWEEPCKFQPKRFLTRHKDIDVKGQN  335 (409)
Q Consensus       269 p~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~-------------~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~  335 (409)
                      ||++|||+|++|++|+++.. +|.+.+|++++||.             +|||+++|+||++|+||||++..      ..+
T Consensus       351 pyl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~------~~~  423 (490)
T PLN02302        351 EYLSQVIDETLRLINISLTV-FREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYT------PKA  423 (490)
T ss_pred             hHHHHHHHHHHHhCCCcccc-hhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCC------CCC
Confidence            99999999999999999987 79999999999988             89999999999999999999643      245


Q ss_pred             CccccCCCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCCCCCccccccceeccCCCeEEEEEecCC
Q 045077          336 FELLPFSSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNEPLDMEEGLGLTLEKSTPLEVLVAPRLS  404 (409)
Q Consensus       336 ~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  404 (409)
                      ..++|||+|+|.|+|++||.+|++++++.|+++|++++.++. .++.  ...+..|..++.+++++|.+
T Consensus       424 ~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~--~~~~~~p~~~~~~~~~~~~~  489 (490)
T PLN02302        424 GTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG-CKVM--YLPHPRPKDNCLARITKVAS  489 (490)
T ss_pred             CCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC-Ccce--eCCCCCCCCCceEEEEeccC
Confidence            679999999999999999999999999999999999987642 2222  22336677899999999876


No 29 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=1.4e-55  Score=421.05  Aligned_cols=370  Identities=16%  Similarity=0.202  Sum_probs=279.1

Q ss_pred             CCccccccccCC---CCchhHHHHHHHHHhCCeEEEeeCCeeEEEecCHHHHHHHHHhCCCccCCc--------------
Q 045077            1 MASDGHLHLLGG---REPAHRVLDNMADKYGPIFTIRMGINRALVVSNWEIAKECLTTHDKVFANP--------------   63 (409)
Q Consensus         1 ~P~~G~~~~~~~---~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~--------------   63 (409)
                      +|++||++++.+   ..+++.++.+|+++||++|++++++.++|+|+||+++++++.++...|+.+              
T Consensus        38 ~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~lg~~~l  117 (472)
T PLN02987         38 LPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSL  117 (472)
T ss_pred             CCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCcHHHHHHhCcccc
Confidence            599999988731   146888999999999999999999999999999999999998876655432              


Q ss_pred             --------------hhhhccHHHHHHhHHhHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHHHhhHHH-----HHH
Q 045077           64 --------------TLELLSNHRLEKLKNVREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFADTTRSVL-----LTR  124 (409)
Q Consensus        64 --------------~~~~fs~~~l~~~~~~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi-----G~~  124 (409)
                                    +.+.++.+.+..   ...+++.+++....+.   -  + +  ++++.+.+..++++++     |.+
T Consensus       118 ~~~~g~~wr~~R~~~~~f~~~~~~~~---~~~~~~~~~~~~~~~~---~--~-~--~v~~~~~~~~~t~~vi~~~~fg~~  186 (472)
T PLN02987        118 LLMKGNLHKKMHSLTMSFANSSIIKD---HLLLDIDRLIRFNLDS---W--S-S--RVLLMEEAKKITFELTVKQLMSFD  186 (472)
T ss_pred             cccCcHHHHHHHHHHHHhcChHHHHH---HHHHHHHHHHHHHHHh---h--c-c--ceehHHHHHHHHHHHHHHHHcCCC
Confidence                          111111111111   1111122232222221   1  1 2  6788888999999988     321


Q ss_pred             H----H---Hhhcc---cccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhcCcchHHHHHHhh
Q 045077          125 F----F---EMSGK---FVVSDALPFLRWLDIGCDERSMKKIARESDIVVQGWLEEHKRKRDSQEVKKEEEDFMYVMLSI  194 (409)
Q Consensus       125 ~----~---~~~~~---~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~  194 (409)
                      .    .   .....   ......+|++     ....++..+..+++.+++.+.++++++....+  .....|+++.+++.
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~p~l-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~--~~~~~d~l~~ll~~  259 (472)
T PLN02987        187 PGEWTESLRKEYVLVIEGFFSVPLPLF-----STTYRRAIQARTKVAEALTLVVMKRRKEEEEG--AEKKKDMLAALLAS  259 (472)
T ss_pred             ChHHHHHHHHHHHHHHhhhhcCCCcCC-----CchHHHHHHHHHHHHHHHHHHHHHHHhhhhcc--CcccccHHHHHHhc
Confidence            1    0   00000   0111223332     12356677788899999999999887643321  12356999999965


Q ss_pred             ccCccccCCCch-hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhc---CCCCCChhhcccChh
Q 045077          195 LGDAEQYSGRDV-DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVG---TKKQVNESDIKKLVY  270 (409)
Q Consensus       195 ~~~~~~~~~~~l-~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~---~~~~~~~~~~~~lp~  270 (409)
                      ..        .+ +++++++++.+++||+|||+++++|++++|++||++|+++++|++++.+   .+..++++++.+|||
T Consensus       260 ~~--------~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpy  331 (472)
T PLN02987        260 DD--------GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPF  331 (472)
T ss_pred             CC--------CCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChH
Confidence            31        36 8999999999999999999999999999999999999999999999875   235678999999999


Q ss_pred             HHHHHHHHhhcCCCCccccccccccceeeccee-------------ccCCCCCCCCCCCcccCcccCCCCCccccCCCCc
Q 045077          271 LQAILKEAMRLYPAVPLLVPHESIEECTVNGYH-------------LHRDPRAWEEPCKFQPKRFLTRHKDIDVKGQNFE  337 (409)
Q Consensus       271 l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~-------------~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~  337 (409)
                      ++||++|++|++|+++.. +|.+.+|++++||.             +||||++|+||++|+||||++.+..   ......
T Consensus       332 l~a~i~EtLRl~p~~~~~-~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~---~~~~~~  407 (472)
T PLN02987        332 TQCVVNETLRVANIIGGI-FRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGT---TVPSNV  407 (472)
T ss_pred             HHHHHHHHHHccCCcCCc-cccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCC---CCCCcc
Confidence            999999999999999866 89999999999987             8999999999999999999975421   123467


Q ss_pred             cccCCCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCCCCCccccccceeccCCCeEEEEEecCC
Q 045077          338 LLPFSSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNEPLDMEEGLGLTLEKSTPLEVLVAPRLS  404 (409)
Q Consensus       338 ~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  404 (409)
                      ++|||+|+|.|+|++||++|++++++.|+++|++++.++.++.+    ..+..|..++++++++|.-
T Consensus       408 ~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~----~~~~~p~~~~~~~~~~r~~  470 (472)
T PLN02987        408 FTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDKLVF----FPTTRTQKRYPINVKRRDV  470 (472)
T ss_pred             eECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCceee----cccccCCCCceEEEEeccc
Confidence            99999999999999999999999999999999999986543222    3477788899999999853


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=5.1e-55  Score=420.25  Aligned_cols=376  Identities=19%  Similarity=0.222  Sum_probs=284.1

Q ss_pred             ccccccccCCCCchhHHHHHHHHHhC-CeEEEeeCCeeEEEecCHHHHHHHHHhCCCccCCc------------------
Q 045077            3 SDGHLHLLGGREPAHRVLDNMADKYG-PIFTIRMGINRALVVSNWEIAKECLTTHDKVFANP------------------   63 (409)
Q Consensus         3 ~~G~~~~~~~~~~~~~~~~~~~~~yG-~v~~i~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~------------------   63 (409)
                      +.|+.....  .+.+..+..+.++++ .+++++..+.  ++++||+.+++++.++...|.+.                  
T Consensus        51 ~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g~gi~~~  126 (502)
T PLN02426         51 LTASWAKDF--DNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLGRGIFNV  126 (502)
T ss_pred             ccHHHHHhc--ccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcCCceeec
Confidence            445554433  356777777888887 5788876554  89999999999998764344322                  


Q ss_pred             -----------hhhhccHHHHHHhH--HhHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHHHhhHHH-----HHHH
Q 045077           64 -----------TLELLSNHRLEKLK--NVREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFADTTRSVL-----LTRF  125 (409)
Q Consensus        64 -----------~~~~fs~~~l~~~~--~~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi-----G~~~  125 (409)
                                 +.+.|+.++++.+.  +.+++.++.+++.+.+... ..+| .  ++|+.+++..+++|++     |.++
T Consensus       127 ~g~~wk~~Rk~l~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~-~--~vd~~~~~~~~t~dvi~~~~fG~~~  202 (502)
T PLN02426        127 DGDSWRFQRKMASLELGSVSIRSYAFEIVASEIESRLLPLLSSAAD-DGEG-A--VLDLQDVFRRFSFDNICKFSFGLDP  202 (502)
T ss_pred             CcHHHHHHHHHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCC-c--eEcHHHHHHHHHHHHHHHHHhCCCC
Confidence                       67888888887763  6777777888888766410 1223 4  7999999999999999     3322


Q ss_pred             H------------Hhhcc------ccccccccccccc---ccCccHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhcCc
Q 045077          126 F------------EMSGK------FVVSDALPFLRWL---DIGCDERSMKKIARESDIVVQGWLEEHKRKRDSQEVKKEE  184 (409)
Q Consensus       126 ~------------~~~~~------~~~~~~~p~l~~l---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  184 (409)
                      .            .....      ......+|++.++   ...+..++..+..+.+.+++.+.|+++++...     ...
T Consensus       203 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~-----~~~  277 (502)
T PLN02426        203 GCLELSLPISEFADAFDTASKLSAERAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGF-----SAS  277 (502)
T ss_pred             cccCCCCCccHHHHHHHHHHHHHHHHHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhccc-----CCc
Confidence            0            00000      0001122322211   01122456677788888899999988776321     134


Q ss_pred             chHHHHHHhhccCccccCCCchhhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhcCC-CCCChh
Q 045077          185 EDFMYVMLSILGDAEQYSGRDVDRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVGTK-KQVNES  263 (409)
Q Consensus       185 ~d~l~~ll~~~~~~~~~~~~~l~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~-~~~~~~  263 (409)
                      .|+++.+++...+         ++++.+++.++++||+|||+++++|++|+|++||++|+|+++|++++++.+ ..++++
T Consensus       278 ~dll~~ll~~~~~---------~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~  348 (502)
T PLN02426        278 KDLLSRFMASIND---------DKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFE  348 (502)
T ss_pred             chHHHHHHhcCCC---------HHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHH
Confidence            6999999975432         578999999999999999999999999999999999999999999988754 468999


Q ss_pred             hcccChhHHHHHHHHhhcCCCCccccccccccceee-ccee-------------ccCCCCCC-CCCCCcccCcccCCCCC
Q 045077          264 DIKKLVYLQAILKEAMRLYPAVPLLVPHESIEECTV-NGYH-------------LHRDPRAW-EEPCKFQPKRFLTRHKD  328 (409)
Q Consensus       264 ~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~-------------~~~d~~~~-~dp~~F~P~R~l~~~~~  328 (409)
                      ++++||||+|||+|+||++||+|.. .|.+.+|.++ +|+.             +||||++| |||++|+||||++++. 
T Consensus       349 ~l~~LpYl~avi~EtLRl~p~v~~~-~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~-  426 (502)
T PLN02426        349 EMKEMHYLHAALYESMRLFPPVQFD-SKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGV-  426 (502)
T ss_pred             HHhcChHHHHHHHHHHhCCCCCCCc-ceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCC-
Confidence            9999999999999999999999997 6999998777 7776             89999999 9999999999997431 


Q ss_pred             ccccCCCCccccCCCCCCCCCchHHHHHHHHHHHHHHHhhceEEcCCCCCCCccccccceeccCCCeEEEEEecC
Q 045077          329 IDVKGQNFELLPFSSGRRMCPGVSFALQIMQLTLASLLHGFDIAIPSNEPLDMEEGLGLTLEKSTPLEVLVAPRL  403 (409)
Q Consensus       329 ~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  403 (409)
                       .....+..++|||+|+|.|+|+++|++|++++++.|+++|+++++++.........+++..++.+++|++++|.
T Consensus       427 -~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r~  500 (502)
T PLN02426        427 -FVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRERV  500 (502)
T ss_pred             -cCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEEEcc
Confidence             11124567999999999999999999999999999999999998754321223344677888899999999985


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=1.5e-47  Score=363.32  Aligned_cols=354  Identities=14%  Similarity=0.186  Sum_probs=246.4

Q ss_pred             CCccccccccCC---CCchhHHHHHHHHHhCC-eEEEeeCCeeE-------EEecCHHHHHHHHHh----CCCccC----
Q 045077            1 MASDGHLHLLGG---REPAHRVLDNMADKYGP-IFTIRMGINRA-------LVVSNWEIAKECLTT----HDKVFA----   61 (409)
Q Consensus         1 ~P~~G~~~~~~~---~~~~~~~~~~~~~~yG~-v~~i~~~~~~~-------vvv~d~~~~~~vl~~----~~~~~~----   61 (409)
                      +|++|+++++.+   ..++..++.+.++|||+ ||+++++|+++       |+++||++++.++..    ++..+.    
T Consensus        25 ~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~~~~~~~~~~~  104 (480)
T PLN02648         25 LPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVDKRDVFTGTYM  104 (480)
T ss_pred             CcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhccccccceeeec
Confidence            699999987542   25668999999999999 99999988665       999999999999974    322111    


Q ss_pred             --------C-------c-----------hhhhccHHHHHHhHHhHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHH
Q 045077           62 --------N-------P-----------TLELLSNHRLEKLKNVREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFAD  115 (409)
Q Consensus        62 --------~-------~-----------~~~~fs~~~l~~~~~~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~  115 (409)
                              .       .           +.+.|+ .+++.+.+.+.+.++++++.|...   ..+| .  .+|+.+.+..
T Consensus       105 ~~~~l~G~~~~~s~~~~~g~~H~r~Rrll~~~f~-~~~~~~~~~m~~~~~~~~~~w~~~---~~~~-~--~vdv~~~~~~  177 (480)
T PLN02648        105 PSTAFTGGYRVLSYLDPSEPKHAKLKSFLFELLK-SRHRRFIPEFRAAFAELFDTWEAE---LAKK-G--KAEFNDPLDQ  177 (480)
T ss_pred             cCccccCCceeeeecCCCCchHHHHHHHHHHHHH-HhhhhhhhHHHHHHHHHHHHHHHH---HhhC-C--CccccchHHH
Confidence                    0       0           788998 477889999999999999999653   2344 4  7999999999


Q ss_pred             HhhHHHHHHHHHhhc-ccccccccc-cccccccCccHHHHHHHHHHHHHHHHHHHHHHHhh----hch--hhhhcCcchH
Q 045077          116 TTRSVLLTRFFEMSG-KFVVSDALP-FLRWLDIGCDERSMKKIARESDIVVQGWLEEHKRK----RDS--QEVKKEEEDF  187 (409)
Q Consensus       116 ~~~~viG~~~~~~~~-~~~~~~~~p-~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~--~~~~~~~~d~  187 (409)
                      +++++++.-++.... ...+...+. +..... .  ......+...+...++..+.++...    ...  ....+.-.+.
T Consensus       178 lt~~vi~~~lfG~~~~~~~l~~~~~~~~~~~~-~--~~~~p~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  254 (480)
T PLN02648        178 MAFNFLCKALTGKDPSETALGSDGPALIQKWL-A--LQLAPLASTGLPHVLEELLLHTFPLPFFLVKSDYDKLYDFFRAS  254 (480)
T ss_pred             HHHHHHHHHHcCCCcchhhhccchhHHHHHHH-H--HHhhHHHHcCchHHHHHHhhcccCCchhhhhccHHHHHHHHHHH
Confidence            999999433311100 000111110 000000 0  0000000000111112211111000    000  0000001122


Q ss_pred             HHHHHhhccCccccCCCch-hhHHHHHHHH-HHHHhhhchHHHHHHHHHHHHhChh-HHHHHHHHHHHHhcC-CCCCChh
Q 045077          188 MYVMLSILGDAEQYSGRDV-DRINKAICLA-LILAATDTTTVTLTWVISLLLNHRD-ILNKAQNELDIQVGT-KKQVNES  263 (409)
Q Consensus       188 l~~ll~~~~~~~~~~~~~l-~~~i~~~~~~-~~~aG~dtt~~~l~~~l~~L~~~p~-~~~~l~~Ei~~~~~~-~~~~~~~  263 (409)
                      ++.+++...+.      ++ +++++++++. +.+++++||+++++|++++|++||+ +|+++++|++++.+. +..++++
T Consensus       255 ~~~ll~~~~~~------~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~  328 (480)
T PLN02648        255 ATEALDLAEKF------GISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFA  328 (480)
T ss_pred             HHHHHHHHHhc------CCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHH
Confidence            33555433322      37 8899998875 4567788888899999999999995 999999999999863 4578999


Q ss_pred             hcccChhHHHHHHHHhhcCCCCccccccccccceeec----cee-------------ccCCCCCCCCCCCcccCcccCCC
Q 045077          264 DIKKLVYLQAILKEAMRLYPAVPLLVPHESIEECTVN----GYH-------------LHRDPRAWEEPCKFQPKRFLTRH  326 (409)
Q Consensus       264 ~~~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~----g~~-------------~~~d~~~~~dp~~F~P~R~l~~~  326 (409)
                      ++++|||+++||+|+||++|+++.. .|.+.+|++++    ||.             +||||++|+||++|+|+||++++
T Consensus       329 ~l~~l~yl~avi~EtLRl~p~v~~~-~r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~  407 (480)
T PLN02648        329 ALEKMPLVKSVVYEALRIEPPVPFQ-YGRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEE  407 (480)
T ss_pred             HHhcCHHHHHHHHHHHhhcCCcccc-cceecCCEEEecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCC
Confidence            9999999999999999999999998 68899999996    555             89999999999999999999754


Q ss_pred             CCccccCCCCcccc---------CCCCCCCCCchHHHHHHHHHHHHHHHhhce-EEcCCC
Q 045077          327 KDIDVKGQNFELLP---------FSSGRRMCPGVSFALQIMQLTLASLLHGFD-IAIPSN  376 (409)
Q Consensus       327 ~~~~~~~~~~~~~~---------Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~-~~~~~~  376 (409)
                      +.     ....+++         ||+|+|.|+|++||++|++++++.|+++|+ +++.++
T Consensus       408 ~~-----~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~  462 (480)
T PLN02648        408 GE-----KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVD  462 (480)
T ss_pred             cc-----ccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCC
Confidence            21     1123344         467789999999999999999999999998 998765


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=1.1e-45  Score=346.47  Aligned_cols=328  Identities=26%  Similarity=0.365  Sum_probs=259.4

Q ss_pred             hHHHHHHHHHhCCeEEEeeCCee--EEEecCHHHHHHHHHhCCCccCCc-------------------------------
Q 045077           17 HRVLDNMADKYGPIFTIRMGINR--ALVVSNWEIAKECLTTHDKVFANP-------------------------------   63 (409)
Q Consensus        17 ~~~~~~~~~~yG~v~~i~~~~~~--~vvv~d~~~~~~vl~~~~~~~~~~-------------------------------   63 (409)
                      ......+.+.||.+++++..+..  ++++++++++++++.++. .+++.                               
T Consensus        25 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~R  103 (411)
T COG2124          25 RFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLR  103 (411)
T ss_pred             hhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHHH
Confidence            44556677888999988876544  799999999999998763 11110                               


Q ss_pred             --hhhhccHHHHHHhHHhHHHHHHHHHHHHHHHhhhccCCCchhhHHHHHHHHHHhhHHH----HHHHHH---hhccc--
Q 045077           64 --TLELLSNHRLEKLKNVREYELKTCLKELYELWNKNKSTDKLLLVEMKRWFADTTRSVL----LTRFFE---MSGKF--  132 (409)
Q Consensus        64 --~~~~fs~~~l~~~~~~~~~~~~~ll~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi----G~~~~~---~~~~~--  132 (409)
                        ++++|+++.++.+.+.+.+.+++++..+ ..      + .  ..++.+.+..+++++|    |.+...   .....  
T Consensus       104 kl~~~~F~~~~~~~~~~~i~~~~~~~~~~~-~~------~-~--~~~v~~~a~~l~~~vi~~l~Gv~~~~~~~~~~~~~~  173 (411)
T COG2124         104 KLLAPAFTPRALRGYRPLIREIADRLLDDL-WQ------G-G--ADLVLDFAAELTLRVIAELLGVPLEDRPQLLRWSDA  173 (411)
T ss_pred             HHhccccCHHHHHHHHHHHHHHHHHHHHhc-cc------C-C--chhHHHHhhhhhHHHHHHHhCCCHHHHHHHHHHHHH
Confidence              8999999999999999999999999999 43      2 3  7888999999999999    322211   11100  


Q ss_pred             ccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhcCcchHHHHHHhhccCccccCCCch-hhHHH
Q 045077          133 VVSDALPFLRWLDIGCDERSMKKIARESDIVVQGWLEEHKRKRDSQEVKKEEEDFMYVMLSILGDAEQYSGRDV-DRINK  211 (409)
Q Consensus       133 ~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~l-~~~i~  211 (409)
                      ......|..   .......+..++...+.+++.++|++++.        +..+|+++.|+...+++    +..+ +++++
T Consensus       174 ~~~~~~~~~---~~~~~~~~~~~a~~~~~~~~~~li~~rR~--------~~~~dlls~l~~a~~~~----~~~lsd~Ei~  238 (411)
T COG2124         174 LLLRLDPDL---GPEEPWRRARAARRELDAYLRALIAERRA--------APRDDLLSLLLSAEDDG----GGRLSDDEIR  238 (411)
T ss_pred             HHhccCccc---CCcccHHHHHHHHHHHHHHHHHHHHHhcc--------CCcccHHHHHHHHhhCC----CCcCCHHHHH
Confidence            000000111   11123567788899999999999999883        36779999999887664    2257 99999


Q ss_pred             HHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHhcCCCCCChhhcccChhHHHHHHHHhhcCCCCcccccc
Q 045077          212 AICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQVGTKKQVNESDIKKLVYLQAILKEAMRLYPAVPLLVPH  291 (409)
Q Consensus       212 ~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~R  291 (409)
                      ++++++++||+|||+++|+|+++.|++||++++++++|.+.                ||++++|+|+||++||++. .+|
T Consensus       239 ~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~ppv~~-~~R  301 (411)
T COG2124         239 DELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYPPVPL-ARR  301 (411)
T ss_pred             HHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCCchhc-cce
Confidence            99999999999999999999999999999999999999864                8899999999999999999 599


Q ss_pred             ccccceeeccee-------------ccCCCCCCCCCCCcccCcccCCCCCccccCCCCccccCCCCCCCCCchHHHHHHH
Q 045077          292 ESIEECTVNGYH-------------LHRDPRAWEEPCKFQPKRFLTRHKDIDVKGQNFELLPFSSGRRMCPGVSFALQIM  358 (409)
Q Consensus       292 ~~~~d~~~~g~~-------------~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~  358 (409)
                      .+.+|++++|+.             +||||++|+||++|+|+||.            ..|+|||+|+|.|+|.+||++|+
T Consensus       302 ~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~------------~~~l~FG~G~H~ClG~~lA~~E~  369 (411)
T COG2124         302 VATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN------------NAHLPFGGGPHRCLGAALARLEL  369 (411)
T ss_pred             eccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC------------CCCcCCCCCCccccCHHHHHHHH
Confidence            999999999987             89999999999999999998            23799999999999999999999


Q ss_pred             HHHHHHHHhhceEEcCCCCCCCccccccceeccCCCeEEEEEec
Q 045077          359 QLTLASLLHGFDIAIPSNEPLDMEEGLGLTLEKSTPLEVLVAPR  402 (409)
Q Consensus       359 ~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  402 (409)
                      +++++.|+++|+.....+ ......  ..+..+..+..+.++.+
T Consensus       370 ~~~l~~ll~r~~~~~~~~-~~~~~~--~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         370 KVALAELLRRFPLLLLAE-PPPLVR--RPTLVPRGGERLPVRRR  410 (411)
T ss_pred             HHHHHHHHHhCchhhcCC-CCCccc--cccccCCCcceeeeecC
Confidence            999999999999887765 212222  22333445555655543


No 33 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=59.66  E-value=23  Score=21.84  Aligned_cols=43  Identities=14%  Similarity=-0.015  Sum_probs=35.3

Q ss_pred             hHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHH
Q 045077          208 RINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNEL  250 (409)
Q Consensus       208 ~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei  250 (409)
                      -++...+..++-.|.|-.+..++--+.+.--||+.++.+-.|+
T Consensus         5 ~d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    5 LDVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            3566777788888888888888888888888999988887776


No 34 
>PF14459 Prok-E2_C:  Prokaryotic E2 family C
Probab=46.69  E-value=10  Score=27.60  Aligned_cols=17  Identities=24%  Similarity=0.411  Sum_probs=14.1

Q ss_pred             CCccccCCCCCCCCCch
Q 045077          335 NFELLPFSSGRRMCPGV  351 (409)
Q Consensus       335 ~~~~~~Fg~G~r~C~G~  351 (409)
                      -.+.+|||.|--.|+|.
T Consensus       104 gss~~p~GaGaAaC~aA  120 (131)
T PF14459_consen  104 GSSNNPFGAGAAACFAA  120 (131)
T ss_pred             CcccCCcCccHHHHHHH
Confidence            45689999999999875


No 35 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=45.78  E-value=22  Score=22.86  Aligned_cols=25  Identities=16%  Similarity=0.363  Sum_probs=19.3

Q ss_pred             HHHHHHHhChhHHHHHHHHHHHHhc
Q 045077          231 WVISLLLNHRDILNKAQNELDIQVG  255 (409)
Q Consensus       231 ~~l~~L~~~p~~~~~l~~Ei~~~~~  255 (409)
                      -++.+|.+||++.+++.+.=...+|
T Consensus         4 ~iV~YLv~nPevl~kl~~g~asLIG   28 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGEASLIG   28 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCCeeEec
Confidence            3577999999999999886554444


No 36 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=36.82  E-value=33  Score=26.49  Aligned_cols=22  Identities=18%  Similarity=0.392  Sum_probs=16.5

Q ss_pred             CCCchHHHHHHHHHHHHHHHhh
Q 045077          347 MCPGVSFALQIMQLTLASLLHG  368 (409)
Q Consensus       347 ~C~G~~lA~~e~~~~l~~ll~~  368 (409)
                      .|.|+.||+.++-.++.+|+..
T Consensus        19 N~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   19 NCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             ETTS----HHHHHHHHHHHHHS
T ss_pred             cccchHHHHHHHHHHHHHHhcC
Confidence            7999999999999999999874


No 37 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=34.85  E-value=18  Score=22.76  Aligned_cols=10  Identities=40%  Similarity=0.866  Sum_probs=8.7

Q ss_pred             ccCCCCCCCC
Q 045077          339 LPFSSGRRMC  348 (409)
Q Consensus       339 ~~Fg~G~r~C  348 (409)
                      -+||-|.|.|
T Consensus        12 ~kfg~GsrsC   21 (56)
T KOG3506|consen   12 RKFGQGSRSC   21 (56)
T ss_pred             cccCCCCcce
Confidence            5799999987


No 38 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=29.80  E-value=1.2e+02  Score=18.85  Aligned_cols=34  Identities=15%  Similarity=0.204  Sum_probs=23.5

Q ss_pred             HHHHHHhCCeEEEeeCCe----eEEEecCHHHHHHHHH
Q 045077           21 DNMADKYGPIFTIRMGIN----RALVVSNWEIAKECLT   54 (409)
Q Consensus        21 ~~~~~~yG~v~~i~~~~~----~~vvv~d~~~~~~vl~   54 (409)
                      .+.-.+||+|-++.+...    =+|-..+.+.++....
T Consensus         2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            456689999998886442    3555568888888875


No 39 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=29.58  E-value=1.3e+02  Score=22.99  Aligned_cols=41  Identities=17%  Similarity=0.220  Sum_probs=31.5

Q ss_pred             CchhHHHHHHHHHhCCeEEEeeCCeeEEEecCHHHHHHHHHhC
Q 045077           14 EPAHRVLDNMADKYGPIFTIRMGINRALVVSNWEIAKECLTTH   56 (409)
Q Consensus        14 ~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~d~~~~~~vl~~~   56 (409)
                      ++....+.+|.++||.+--.  .+...+.+.|++.++++....
T Consensus        74 ~~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   74 QNVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhCh
Confidence            56778999999999976432  246677788999999997543


No 40 
>COG5598 Trimethylamine:corrinoid methyltransferase [Coenzyme metabolism]
Probab=28.92  E-value=85  Score=30.18  Aligned_cols=73  Identities=15%  Similarity=0.187  Sum_probs=54.7

Q ss_pred             ChhHHHHHHHHhhcCCCCccccccccccceeecceeccCCCCCCCCCCCcccCcccCCCCCccccCCCCccccCCCCCCC
Q 045077          268 LVYLQAILKEAMRLYPAVPLLVPHESIEECTVNGYHLHRDPRAWEEPCKFQPKRFLTRHKDIDVKGQNFELLPFSSGRRM  347 (409)
Q Consensus       268 lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~  347 (409)
                      .-+=.+.|+|.++..|....+..|....|++++|.                                +-.|.+++++++.
T Consensus        99 Vr~~r~lv~~~l~~aps~ftl~aRnp~r~v~igG~--------------------------------~v~f~~~~gap~v  146 (526)
T COG5598          99 VRFPRGLVREALKSAPSSFTLHARNPKRDVQIGGN--------------------------------NVHFGPAYGAPNV  146 (526)
T ss_pred             EeecHHHHHHHHHhCchhheeccCCcccceeecCc--------------------------------eeEEEecCCCcee
Confidence            33346899999998887777766766666666543                                4457888888888


Q ss_pred             C---CchHHHHHHHHHHHHHHHhhceEE
Q 045077          348 C---PGVSFALQIMQLTLASLLHGFDIA  372 (409)
Q Consensus       348 C---~G~~lA~~e~~~~l~~ll~~f~~~  372 (409)
                      |   =|++.+.++-.-=+++|..+++.-
T Consensus       147 ~Dl~~grr~gtl~D~~n~~kLa~~~~~i  174 (526)
T COG5598         147 RDLDKGRRYGTLEDYRNLAKLAQHAPNI  174 (526)
T ss_pred             eeccCCcccchHHHHHHHHHHHhhcchh
Confidence            8   688888888888888998888633


No 41 
>PF13993 YccJ:  YccJ-like protein
Probab=28.28  E-value=1e+02  Score=20.02  Aligned_cols=32  Identities=22%  Similarity=0.194  Sum_probs=25.2

Q ss_pred             HHhhhchHHHHHHHHHHHHhChhH-HHHHHHHH
Q 045077          219 LAATDTTTVTLTWVISLLLNHRDI-LNKAQNEL  250 (409)
Q Consensus       219 ~aG~dtt~~~l~~~l~~L~~~p~~-~~~l~~Ei  250 (409)
                      +|..-.|+.-++-++++|+.+.+. .+++++|=
T Consensus         8 WA~~ReTS~EIAeAIFElA~~dE~lAekIWeeG   40 (69)
T PF13993_consen    8 WANVRETSIEIAEAIFELANNDEVLAEKIWEEG   40 (69)
T ss_pred             HHHHhcCCHHHHHHHHHHhcccHHHHHHHHHcc
Confidence            456667888999999999999884 56777764


No 42 
>TIGR00589 ogt O-6-methylguanine DNA methyltransferase. All proteins in this family for which functions are known are involved alkyl-DNA transferases which remove alkyl groups from DNA as part of alkylation DNA repair. Some of the proteins in this family are also transcription regulators and have a distinct transcription regulatory domain. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=21.78  E-value=1.8e+02  Score=20.27  Aligned_cols=61  Identities=10%  Similarity=0.029  Sum_probs=39.1

Q ss_pred             hHHHHHHHHHHHHhcCCCCCChhhccc---ChhHHHHHHHHhhcCCCCcccc-ccccccceeecce
Q 045077          241 DILNKAQNELDIQVGTKKQVNESDIKK---LVYLQAILKEAMRLYPAVPLLV-PHESIEECTVNGY  302 (409)
Q Consensus       241 ~~~~~l~~Ei~~~~~~~~~~~~~~~~~---lp~l~a~i~E~lRl~p~~~~~~-~R~~~~d~~~~g~  302 (409)
                      +.|.++++.+.+ ++.+...|+.++.+   .|---..|--+++-.|.....- -|++..+-.++||
T Consensus         2 ~f~~~V~~~l~~-IP~G~v~TYg~iA~~~g~p~~~RaVg~al~~np~~~~iPcHRVv~s~G~l~~y   66 (80)
T TIGR00589         2 PFQQRVWQALRT-IPYGETKSYGQLAARIGNPKAVRAVGGANGRNPLAILVPCHRVIGKNGSLTGY   66 (80)
T ss_pred             hHHHHHHHHHhC-CCCCCcCCHHHHHHHhCCCChHHHHHHHHHhCCCCCCCCCceeECCCCCCCCC
Confidence            467888888876 44567788888754   3445566777777776543331 2666666666655


No 43 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=21.71  E-value=61  Score=21.08  Aligned_cols=9  Identities=33%  Similarity=0.940  Sum_probs=7.1

Q ss_pred             ccCcccCCC
Q 045077          318 QPKRFLTRH  326 (409)
Q Consensus       318 ~P~R~l~~~  326 (409)
                      ||||||.-.
T Consensus        44 DPERWLP~~   52 (59)
T PF08492_consen   44 DPERWLPKR   52 (59)
T ss_pred             CccccCchh
Confidence            889998754


No 44 
>PF07849 DUF1641:  Protein of unknown function (DUF1641);  InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long. 
Probab=21.38  E-value=1.1e+02  Score=18.14  Aligned_cols=19  Identities=11%  Similarity=0.006  Sum_probs=15.2

Q ss_pred             HHHHHHHHhChhHHHHHHH
Q 045077          230 TWVISLLLNHRDILNKAQN  248 (409)
Q Consensus       230 ~~~l~~L~~~p~~~~~l~~  248 (409)
                      .|.+..++++||+|.-+.-
T Consensus        13 l~gl~~~l~DpdvqrgL~~   31 (42)
T PF07849_consen   13 LFGLLRALRDPDVQRGLGF   31 (42)
T ss_pred             HHHHHHHHcCHHHHHHHHH
Confidence            4677788999999987764


No 45 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=20.57  E-value=2e+02  Score=20.42  Aligned_cols=18  Identities=17%  Similarity=0.254  Sum_probs=15.0

Q ss_pred             ChhHHHHHHHHHHHHhcC
Q 045077          239 HRDILNKAQNELDIQVGT  256 (409)
Q Consensus       239 ~p~~~~~l~~Ei~~~~~~  256 (409)
                      .|+....+|+||-+++..
T Consensus        35 ~pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851          35 QPDYLEQLRKEILEVISK   52 (88)
T ss_pred             CcchHHHHHHHHHHHHHH
Confidence            388999999999988753


No 46 
>COG1707 ACT domain-containing protein [General function prediction only]
Probab=20.38  E-value=1.2e+02  Score=24.33  Aligned_cols=37  Identities=19%  Similarity=0.238  Sum_probs=28.0

Q ss_pred             CchhHHHHHHHHHhC-CeEEEeeCC-ee---EEEecCHHHHH
Q 045077           14 EPAHRVLDNMADKYG-PIFTIRMGI-NR---ALVVSNWEIAK   50 (409)
Q Consensus        14 ~~~~~~~~~~~~~yG-~v~~i~~~~-~~---~vvv~d~~~~~   50 (409)
                      ....+...++.++|| |+.++.++| .|   -+|++||=.+-
T Consensus       154 GkIteaVk~lr~~hgI~VISL~M~GSVpdVADlVvtDPvqAG  195 (218)
T COG1707         154 GKITEAVKELREEHGIPVISLNMFGSVPDVADLVVTDPVQAG  195 (218)
T ss_pred             chHHHHHHHHHHhcCCeEEEeccCCCCcchhheeecCchHhh
Confidence            567889999999999 899998765 22   36777875443


No 47 
>PLN03134 glycine-rich RNA-binding protein 4; Provisional
Probab=20.31  E-value=3.3e+02  Score=21.36  Aligned_cols=39  Identities=8%  Similarity=0.074  Sum_probs=29.5

Q ss_pred             hHHHHHHHHHhCCeEEEeeC---------CeeEEEecCHHHHHHHHHh
Q 045077           17 HRVLDNMADKYGPIFTIRMG---------INRALVVSNWEIAKECLTT   55 (409)
Q Consensus        17 ~~~~~~~~~~yG~v~~i~~~---------~~~~vvv~d~~~~~~vl~~   55 (409)
                      .+.+.++-++||+|..+.+.         +--+|-..+++.++.++..
T Consensus        48 e~~L~~~F~~~G~I~~v~i~~d~~tg~~kGfaFV~F~~~e~A~~Al~~   95 (144)
T PLN03134         48 DASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE   95 (144)
T ss_pred             HHHHHHHHhcCCCeEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence            46777888999999887663         2346667799999999864


No 48 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=20.09  E-value=3.2e+02  Score=19.18  Aligned_cols=48  Identities=6%  Similarity=0.018  Sum_probs=40.7

Q ss_pred             hhHHHHHHHHHHHHhhhchHHHHHHHHHHHHhChhHHHHHHHHHHHHh
Q 045077          207 DRINKAICLALILAATDTTTVTLTWVISLLLNHRDILNKAQNELDIQV  254 (409)
Q Consensus       207 ~~~i~~~~~~~~~aG~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  254 (409)
                      ...........++--+..+++...-.+.+-++||+...++.+.+...+
T Consensus        31 ~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   31 SDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            455566667889999999999999999999999999999999887654


Done!