Your job contains 1 sequence.
>045079
MDAIFEGFPGSMDGFKFPASSCSNQNLANAFKLKHNSTNHHPPFLETNPHPPADDNLNSD
GDSPDSSDFSNAVLKYISEILMEEDLEGKTCMLQDCLALQAAEKSFYDVLGQKYPPSLNH
VLPSLGQNIDTPDVHYTSSSSGSSSSDHSFSTSNCLLDSPESNLLVPNLHGEIESLLKRE
GVNFAPKVSLPKHGEGVLLSSADDGRHHSSYGSRGRKNDQREDSDYLEQGRRSKLSAVSL
AVSDVKLERFDEVLLRHCETKKDESEPYSSYRESENGSSRKLQQNGQSKGSTGGTTRGRK
RGDKRKEVVDLRGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALE
ARLLGAHTPMHTHISCRTSAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHI
IDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERF
NVPFEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKR
INPDVFIHGISNGTYNAPFFLARFREALFHFSAMFDIFDATVPREDAERMLFEREI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 045079
(596 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2075155 - symbol:AT3G46600 species:3702 "Arabi... 899 2.4e-114 3
TAIR|locus:2025022 - symbol:SCL14 "SCARECROW-like 14" spe... 955 3.8e-114 2
TAIR|locus:2040701 - symbol:AT2G37650 species:3702 "Arabi... 896 4.0e-104 2
TAIR|locus:2148293 - symbol:AT5G59450 species:3702 "Arabi... 931 1.1e-103 2
TAIR|locus:2025032 - symbol:AT1G07520 "AT1G07520" species... 815 3.1e-87 2
TAIR|locus:2164783 - symbol:PAT1 "AT5G48150" species:3702... 413 1.3e-38 1
TAIR|locus:2174974 - symbol:AT5G66770 "AT5G66770" species... 405 9.4e-38 1
TAIR|locus:2008076 - symbol:SCL5 "AT1G50600" species:3702... 389 2.8e-35 1
TAIR|locus:2080345 - symbol:SCR "SCARECROW" species:3702 ... 380 2.5e-33 1
TAIR|locus:2044973 - symbol:SCL21 "AT2G04890" species:370... 350 1.0e-31 1
TAIR|locus:2026982 - symbol:SCL1 "AT1G21450" species:3702... 342 1.1e-28 2
TAIR|locus:2101694 - symbol:AT3G50650 "AT3G50650" species... 335 4.6e-28 1
TAIR|locus:2008086 - symbol:SCL3 "AT1G50420" species:3702... 270 6.6e-26 2
TAIR|locus:2165685 - symbol:AT5G41920 "AT5G41920" species... 296 3.7e-25 1
TAIR|locus:2099624 - symbol:RGL2 "RGA-like 2" species:370... 308 7.4e-25 1
TAIR|locus:2006747 - symbol:GAI "GIBBERELLIC ACID INSENSI... 302 3.3e-24 1
TAIR|locus:2005516 - symbol:RGA1 "REPRESSOR OF GA1-3 1" s... 302 4.7e-24 1
TAIR|locus:2201557 - symbol:RGL1 "RGA-like 1" species:370... 292 3.9e-23 1
TAIR|locus:2020487 - symbol:LAS "AT1G55580" species:3702 ... 238 2.2e-21 2
TAIR|locus:2132482 - symbol:AT4G08250 "AT4G08250" species... 274 3.6e-21 1
TAIR|locus:2157477 - symbol:RGL3 "RGA-like protein 3" spe... 275 3.8e-21 1
TAIR|locus:2120106 - symbol:SHR "AT4G37650" species:3702 ... 273 6.7e-21 1
TAIR|locus:2015243 - symbol:AT1G63100 "AT1G63100" species... 275 7.2e-21 1
UNIPROTKB|Q84MM9 - symbol:MOC1 "Protein MONOCULM 1" speci... 208 8.9e-18 2
TAIR|locus:2083073 - symbol:AT3G49950 "AT3G49950" species... 223 1.3e-15 1
TAIR|locus:2184625 - symbol:SCL8 "AT5G52510" species:3702... 193 7.9e-12 1
TAIR|locus:2087994 - symbol:AT3G13840 "AT3G13840" species... 163 5.7e-08 2
TAIR|locus:2101801 - symbol:HAM2 "AT3G60630" species:3702... 149 5.0e-07 1
TAIR|locus:2055622 - symbol:HAM1 "AT2G45160" species:3702... 145 1.4e-06 1
TAIR|locus:1009023400 - symbol:AT5G67411 "AT5G67411" spec... 131 2.5e-06 1
TAIR|locus:2126901 - symbol:HAM3 "AT4G00150" species:3702... 141 3.1e-06 1
TAIR|locus:2115340 - symbol:HAM4 "AT4G36710" species:3702... 127 0.00043 2
>TAIR|locus:2075155 [details] [associations]
symbol:AT3G46600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016671 "oxidoreductase
activity, acting on a sulfur group of donors, disulfide as
acceptor" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AL133314
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
ProtClustDB:CLSN2685117 EMBL:AK226419 EMBL:AY087418 IPI:IPI00537144
PIR:T45597 RefSeq:NP_190244.1 UniGene:At.595 STRING:Q9SNB8
EnsemblPlants:AT3G46600.1 GeneID:823813 KEGG:ath:AT3G46600
GeneFarm:4254 TAIR:At3g46600 eggNOG:NOG304481 InParanoid:Q9SNB8
OMA:FNESESQ PhylomeDB:Q9SNB8 Genevestigator:Q9SNB8 Uniprot:Q9SNB8
Length = 583
Score = 899 (321.5 bits), Expect = 2.4e-114, Sum P(3) = 2.4e-114
Identities = 174/288 (60%), Positives = 214/288 (74%)
Query: 309 VDLRGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHT 368
VD+R LL CAQAVAS DQR A E+LK+IR HSS GD TQRL ++FA+ALEAR+ G T
Sbjct: 207 VDMRNLLMQCAQAVASFDQRRAFEKLKEIREHSSRHGDATQRLGYHFAEALEARITGTMT 266
Query: 369 PMHTHISCRTSAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYG 428
+ S RTS DILKAY+ + A P + M Y AN+TI +LA KAT LHIIDFGI YG
Sbjct: 267 TPISATSSRTSMVDILKAYKGFVQACPTLIMCYFTANRTINELASKATTLHIIDFGILYG 326
Query: 429 FQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNV 488
FQWPCLIQ LS R GPP+LR+TGIELPQ GFRP+ERVEETG RLK +C++FNVPFEY+
Sbjct: 327 FQWPCLIQALSKRDIGPPLLRVTGIELPQSGFRPSERVEETGRRLKRFCDKFNVPFEYSF 386
Query: 489 IAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIH 548
IA+ WE I L+D I+ E TVVNC+ R++ PD+TV +SPRD L L + INPD+F+
Sbjct: 387 IAKNWENITLDDLVINSGETTVVNCILRLQYTPDETVSLNSPRDTALKLFRDINPDLFVF 446
Query: 549 GISNGTYNAPFFLARFREALFHFSAMFDIFDATVPREDAERMLFEREI 596
NGTYN+PFFL RFREALFH S++FD+++ T+ +D R L ERE+
Sbjct: 447 AEINGTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNCRTLVEREL 494
Score = 166 (63.5 bits), Expect = 2.4e-114, Sum P(3) = 2.4e-114
Identities = 53/139 (38%), Positives = 70/139 (50%)
Query: 1 MDAIFEGFPGSMDGFKFPASSCSNQNLANAFKLKHNSTNHHPPFLET----NPHPPAXXX 56
MDAI P +DGF+F S S N L+ +TN F E+ NP P
Sbjct: 1 MDAIL---PVPVDGFRFDTGSGSCCKPRN--NLESGTTNRFTCFNESESQSNPSP----- 50
Query: 57 XXXXXXXXXXXXXXXAVLKYISEILMEEDLEGKTCMLQDCLALQAAEKSFYDVLGQKYPP 116
V KYI+++LMEEDLEG++CML+D LALQAAE+SF++VL + P
Sbjct: 51 -----TESKVCSDYLPVFKYINDMLMEEDLEGQSCMLEDSLALQAAERSFFEVLQDQTPI 105
Query: 117 SLNHVLPSLGQNIDTPDVH 135
S + SLG +H
Sbjct: 106 SGDLEDGSLGNFSSITSLH 124
Score = 97 (39.2 bits), Expect = 2.4e-114, Sum P(3) = 2.4e-114
Identities = 29/71 (40%), Positives = 36/71 (50%)
Query: 214 RGRKNDQREDSDYLEQGRRSKLSAVSLAVSDVKLERFDEVLLRHCETKKDXXXXXXXXXX 273
R R D ED D LE GR+SKL A+S D E+F+EVLL C+ K D
Sbjct: 135 RYRHRDDDEDDD-LESGRKSKLPAISTV--DELAEKFEEVLLV-CQ-KNDQGEATEKKTR 189
Query: 274 XXNGSSRKLQQ 284
GSS + +Q
Sbjct: 190 HVKGSSNRYKQ 200
>TAIR|locus:2025022 [details] [associations]
symbol:SCL14 "SCARECROW-like 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003700
GO:GO:0006351 GO:GO:0009410 EMBL:AC022464 InterPro:IPR005202
PROSITE:PS50985 HOGENOM:HOG000238576 EMBL:AF036309 IPI:IPI00525012
PIR:T51232 RefSeq:NP_172233.1 UniGene:At.21921 STRING:Q9XE58
PaxDb:Q9XE58 PRIDE:Q9XE58 EnsemblPlants:AT1G07530.1 GeneID:837267
KEGG:ath:AT1G07530 GeneFarm:4250 TAIR:At1g07530 eggNOG:NOG319005
OMA:HEDFVVD PhylomeDB:Q9XE58 Genevestigator:Q9XE58 Uniprot:Q9XE58
Length = 769
Score = 955 (341.2 bits), Expect = 3.8e-114, Sum P(2) = 3.8e-114
Identities = 204/397 (51%), Positives = 266/397 (67%)
Query: 207 HHSSYG---SR--GRKNDQR-EDSDYLEQGRRSKLSAVSLAVSDVKLERFDEVLLRHCET 260
HH SY +R G+K+ R ED D++E+ R +K SAV + S++ E FD++L+ C
Sbjct: 289 HHHSYAPPPNRLTGKKSHWRDEDEDFVEE-RSNKQSAVYVEESELS-EMFDKILV--CGP 344
Query: 261 KKDXXXXXXXXXXXXNGSSRKLQQNGQXXXXXXXXXXXXXXXXXXXEVVDLRGLLTLCAQ 320
K + Q NG E DLR LL LCAQ
Sbjct: 345 GKPVCILNQNFPTE-SAKVVTAQSNG-AKIRGKKSTSTSHSNDSKKETADLRTLLVLCAQ 402
Query: 321 AVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHTHISCR-TS 379
AV+ +D+RTANE L+QIR HSS G+G++RLAHYFA++LEARL G T ++T +S + TS
Sbjct: 403 AVSVDDRRTANEMLRQIREHSSPLGNGSERLAHYFANSLEARLAGTGTQIYTALSSKKTS 462
Query: 380 AADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILS 439
AAD+LKAYQ +S PF + + +FAN ++ + A +HIIDFGI YGFQWP LI LS
Sbjct: 463 AADMLKAYQTYMSVCPFKKAAIIFANHSMMRFTANANTIHIIDFGISYGFQWPALIHRLS 522
Query: 440 -SRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETIRL 498
SRP G P LRITGIELPQ GFRPAE V+ETG+RL YC+R NVPFEYN IAQKWETI++
Sbjct: 523 LSRPGGSPKLRITGIELPQRGFRPAEGVQETGHRLARYCQRHNVPFEYNAIAQKWETIQV 582
Query: 499 EDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGISNGTYNAP 558
ED K+ + E VVN + R +NL D+TV+ +SPRDAVL LI++INP+VFI I +G YNAP
Sbjct: 583 EDLKLRQGEYVVVNSLFRFRNLLDETVLVNSPRDAVLKLIRKINPNVFIPAILSGNYNAP 642
Query: 559 FFLARFREALFHFSAMFDIFDATVPREDAERMLFERE 595
FF+ RFREALFH+SA+FD+ D+ + RED R+++E+E
Sbjct: 643 FFVTRFREALFHYSAVFDMCDSKLAREDEMRLMYEKE 679
Score = 191 (72.3 bits), Expect = 3.8e-114, Sum P(2) = 3.8e-114
Identities = 51/125 (40%), Positives = 61/125 (48%)
Query: 6 EGFPGSMD------GFKFPASSCSNQNLANAFKLKH-NSTNHHPPFL------ETNPHPP 52
+GFPGSMD F P SS LAN F L + ++ PP N
Sbjct: 6 DGFPGSMDELDFNKDFDLPPSSNQTLGLANGFYLDDLDFSSLDPPEAYPSQNNNNNNINN 65
Query: 53 AXXXXXXXXXXXXXXXXXXAVLKYISEILMEEDLEGKTCMLQDCLALQAAEKSFYDVLGQ 112
+VLKYIS++LMEED+E K CM D LALQAAEKS Y+ LG+
Sbjct: 66 KAVAGDLLSSSSDDADFSDSVLKYISQVLMEEDMEEKPCMFHDALALQAAEKSLYEALGE 125
Query: 113 KYPPS 117
KYP S
Sbjct: 126 KYPSS 130
Score = 44 (20.5 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 352 AHYFADALEARLLGAHTPM 370
+H+ D LE R HTPM
Sbjct: 170 SHWSVDGLENRPSWLHTPM 188
>TAIR|locus:2040701 [details] [associations]
symbol:AT2G37650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:AC004684 Pfam:PF03514 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
eggNOG:NOG319005 EMBL:AF036306 IPI:IPI00536640 PIR:T02531
PIR:T51240 RefSeq:NP_181301.1 UniGene:At.26205 UniGene:At.66411
PaxDb:O80933 PRIDE:O80933 EnsemblPlants:AT2G37650.1 GeneID:818342
KEGG:ath:AT2G37650 GeneFarm:4256 TAIR:At2g37650 InParanoid:O80933
OMA:WERVERP PhylomeDB:O80933 ProtClustDB:CLSN2912903
Genevestigator:O80933 Uniprot:O80933
Length = 718
Score = 896 (320.5 bits), Expect = 4.0e-104, Sum P(2) = 4.0e-104
Identities = 192/391 (49%), Positives = 247/391 (63%)
Query: 213 SRGRKNDQREDSDYLEQGRRSKLSAVSLAVSDVKLERFDEVLLRHCETKKDXXXXXXXXX 272
S+ RKN R D +E+ R SKL AV ++ + D++L+ H +
Sbjct: 243 SKARKNSSR-DEICVEEERSSKLPAV-FGEDILRSDVVDKILV-HVPGGESMKEFNALRD 299
Query: 273 XXXNGSSRKLQQNGQXXXXXXXXXXXXXXXXXXX------EVVDLRGLLTLCAQAVASND 326
G +K + Q EVVDLR LL CAQAVA++D
Sbjct: 300 VLKKGVEKKKASDAQGGKRRARGRGRGRGRGGGGGQNGKKEVVDLRSLLIHCAQAVAADD 359
Query: 327 QRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHTHISCRT-SAADILK 385
+R A + LKQIR HS+ FGDG QRLAH FA+ LEARL G + ++ I + SAA +LK
Sbjct: 360 RRCAGQLLKQIRLHSTPFGDGNQRLAHCFANGLEARLAGTGSQIYKGIVSKPRSAAAVLK 419
Query: 386 AYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGP 445
A+Q+ L+ PF ++SY N+TIR L + R+H+IDFGI YGFQWP LI S G
Sbjct: 420 AHQLFLACCPFRKLSYFITNKTIRDLVGNSQRVHVIDFGILYGFQWPTLIHRFSMY--GS 477
Query: 446 PMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETIRLEDFKIDR 505
P +RITGIE PQPGFRPA+RVEETG RL +Y + F VPFEY IA+KW+ I+LED IDR
Sbjct: 478 PKVRITGIEFPQPGFRPAQRVEETGQRLAAYAKLFGVPFEYKAIAKKWDAIQLEDLDIDR 537
Query: 506 DEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGISNGTYNAPFFLARFR 565
DE+TVVNC++R +NL D++V S RD VL+LI +INPD+F+ GI NG YNAPFF+ RFR
Sbjct: 538 DEITVVNCLYRAENLHDESVKVESCRDTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRFR 597
Query: 566 EALFHFSAMFDIFDATVPREDAERMLFEREI 596
EALFHFS++FD+ + VPRED ERM E E+
Sbjct: 598 EALFHFSSIFDMLETIVPREDEERMFLEMEV 628
Score = 155 (59.6 bits), Expect = 4.0e-104, Sum P(2) = 4.0e-104
Identities = 31/62 (50%), Positives = 43/62 (69%)
Query: 72 AVLKYISEILMEEDLEGKTCMLQDCLALQAAEKSFYDVLGQKYPPSLNHVLPSLGQNIDT 131
AVL YIS++L EED++ K CMLQ+ L L+AAE+S Y+ +G+KYPPS L +N +
Sbjct: 80 AVLGYISQMLNEEDMDDKVCMLQESLDLEAAERSLYEAIGKKYPPSPERNLAFAERNSEN 139
Query: 132 PD 133
D
Sbjct: 140 LD 141
>TAIR|locus:2148293 [details] [associations]
symbol:AT5G59450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AB025604
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY035001 EMBL:AY062942
EMBL:AF036307 IPI:IPI00541926 PIR:T51233 RefSeq:NP_200753.1
UniGene:At.29225 UniGene:At.63919 UniGene:At.72775 STRING:Q9LTI5
EnsemblPlants:AT5G59450.1 GeneID:836064 KEGG:ath:AT5G59450
GeneFarm:4255 TAIR:At5g59450 eggNOG:NOG254902 HOGENOM:HOG000238576
InParanoid:Q9LTI5 OMA:KPATISK PhylomeDB:Q9LTI5
ProtClustDB:CLSN2685117 Genevestigator:Q9LTI5 Uniprot:Q9LTI5
Length = 610
Score = 931 (332.8 bits), Expect = 1.1e-103, Sum P(2) = 1.1e-103
Identities = 197/402 (49%), Positives = 255/402 (63%)
Query: 200 SSADDGRHHSSYGSRGRKNDQREDS-DYLEQGRRSKLSAVSLAVSDVKLERFDEVLLRHC 258
S+ D S G RK R D D LE RR+K A+ ++ + + + VLL C
Sbjct: 124 STTTDSSALVSSGESQRKYRHRNDEEDDLENNRRNKQPAIFVSEMEELAVKLEHVLLV-C 182
Query: 259 ETKKDXXXXXXXXXXXXNGSSRKLQQNGQXXXXXXXXXXXXXXXXXXXEVVDLRGLLTLC 318
+T ++ +R + G VDLR LLT C
Sbjct: 183 KTNQEEEEERTVITKQST-PNRAGRAKGSSNKSKTHKT----------NTVDLRSLLTQC 231
Query: 319 AQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTP--MHTHISC 376
AQAVAS DQR A ++LK+IR HSS+ GDGTQRLA YFA+ALEAR+ G +P + S
Sbjct: 232 AQAVASFDQRRATDKLKEIRAHSSSNGDGTQRLAFYFAEALEARITGNISPPVSNPFPSS 291
Query: 377 RTSAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWPCLIQ 436
TS DILKAY++ + P Y AN++I +LA KAT+LHI+DFG+ YGFQWPCL++
Sbjct: 292 TTSMVDILKAYKLFVHTCPIYVTDYFAANKSIYELAMKATKLHIVDFGVLYGFQWPCLLR 351
Query: 437 ILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETI 496
LS RP GPPMLR+TGIELPQ GFRP++RVEETG RLK +C++FNVPFE+N IA+KWETI
Sbjct: 352 ALSKRPGGPPMLRVTGIELPQAGFRPSDRVEETGRRLKRFCDQFNVPFEFNFIAKKWETI 411
Query: 497 RLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGISNGTYN 556
L++ I+ E TVVNC+HR++ PD+TV SPRD VL L + INPD+F+ NG YN
Sbjct: 412 TLDELMINPGETTVVNCIHRLQYTPDETVSLDSPRDTVLKLFRDINPDLFVFAEINGMYN 471
Query: 557 APFFLARFREALFHFSAMFDIFDATVPREDA--ERMLFEREI 596
+PFF+ RFREALFH+S++FD+FD T+ ED R L ERE+
Sbjct: 472 SPFFMTRFREALFHYSSLFDMFDTTIHAEDEYKNRSLLEREL 513
Score = 116 (45.9 bits), Expect = 1.1e-103, Sum P(2) = 1.1e-103
Identities = 46/135 (34%), Positives = 64/135 (47%)
Query: 1 MDAIFEGFPGSMDGFKFPASSCSNQNLANAFKLKHNSTNHHPPFLET-NPHPPAXXXXXX 59
MDA+ + S+DGF+F S S N + + N P F E+ N P
Sbjct: 1 MDALLQV---SVDGFRFENGSGSCCKPRNNLE---SGNNLFPDFHESQNQSSP------- 47
Query: 60 XXXXXXXXXXXXAVLKYISEILM-EEDLEGKTCMLQDCLALQAAEKSFYDVLGQKYPPSL 118
VLKYI+++LM EED G + +D LALQAAE+SFY+++ Q+ P S
Sbjct: 48 NDSPPTVCLDNSPVLKYINDMLMDEEDFVG---ISRDDLALQAAERSFYEIIQQQSPESD 104
Query: 119 NHVLPSLGQNIDTPD 133
+ S QN D
Sbjct: 105 QNTSSSSDQNSGDQD 119
>TAIR|locus:2025032 [details] [associations]
symbol:AT1G07520 "AT1G07520" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0010200 EMBL:AC022464
InterPro:IPR005202 PROSITE:PS50985 PIR:T51232 eggNOG:NOG319005
EMBL:AB493440 EMBL:BX839686 IPI:IPI00525480 IPI:IPI01019456
RefSeq:NP_172232.1 UniGene:At.63938 UniGene:At.71785 STRING:Q3EDH0
PRIDE:Q3EDH0 GeneID:837266 KEGG:ath:AT1G07520 GeneFarm:4253
TAIR:At1g07520 InParanoid:Q3EDH0 OMA:VRIENEV Genevestigator:Q3EDH0
Uniprot:Q3EDH0
Length = 695
Score = 815 (292.0 bits), Expect = 3.1e-87, Sum P(2) = 3.1e-87
Identities = 205/457 (44%), Positives = 273/457 (59%)
Query: 160 PESNLLVPNLHGEIESLL--KR---EGVNFAPKV-----SLPKHGEGVLLSSADDGRHHS 209
P + +LV ++ + ES+L KR E F P +L E V+ ++G
Sbjct: 175 PANEILVRSMFSDAESVLQFKRGLEEASKFLPNTDQWIFNLEPEMERVVPVKVEEGW--- 231
Query: 210 SYGSRGRKN--DQREDSDYLEQGRR-SKLSAVSLAVSDVKL-ERFDEVLLRHCETKKDXX 265
S S+ RKN ++ E+ D LE+ RR SK AV+ D KL E FD+VLL E
Sbjct: 232 SAISKTRKNHHEREEEEDDLEEARRRSKQFAVN--EEDGKLTEMFDKVLLLDGECDPQII 289
Query: 266 XXXXXXXXXXNGSSRKLQQNGQXXXXXXXXXXXXXXXXXXXEVVDLRGLLTLCAQAVASN 325
NGSS+ L + G+ VD R LLTLCAQ+V++
Sbjct: 290 EDGE------NGSSKALVKKGRAKKKS--------------RAVDFRTLLTLCAQSVSAG 329
Query: 326 DQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPM----HTHISCRT-SA 380
D+ TA++ L+QIR+ S GD +QRLAH+FA+ALEARL G+ M + IS + +A
Sbjct: 330 DKITADDLLRQIRKQCSPVGDASQRLAHFFANALEARLEGSTGTMIQSYYDSISSKKRTA 389
Query: 381 ADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSS 440
A ILK+Y + LSA PF+ + Y F+N+ I A+ A+ LHI+DFGI YGFQWP IQ LS
Sbjct: 390 AQILKSYSVFLSASPFMTLIYFFSNKMILDAAKDASVLHIVDFGILYGFQWPMFIQHLSK 449
Query: 441 RPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQK-WETIRLE 499
G LRITGIE+PQ G RP ER+++TG RL YC+RF VPFEYN IA K WETI++E
Sbjct: 450 SNPGLRKLRITGIEIPQHGLRPTERIQDTGRRLTEYCKRFGVPFEYNAIASKNWETIKME 509
Query: 500 DFKIDRDEVTVVNCVHRMKNLPDDTVVDSS-PRDAVLDLIKRINPDVFIHGISNGTYNAP 558
+FKI +EV VN V R KNL D + PRD L LI+ +NP+VF+ NG++NAP
Sbjct: 510 EFKIRPNEVLAVNAVLRFKNLRDVIPGEEDCPRDGFLKLIRDMNPNVFLSSTVNGSFNAP 569
Query: 559 FFLARFREALFHFSAMFDIFDATVPREDAERMLFERE 595
FF RF+EALFH+SA+FD+F AT+ +E+ ER+ FE E
Sbjct: 570 FFTTRFKEALFHYSALFDLFGATLSKENPERIHFEGE 606
Score = 76 (31.8 bits), Expect = 3.1e-87, Sum P(2) = 3.1e-87
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 73 VLKYISEILMEEDLEGKTCMLQDCLALQAAEKSFYDVLGQKYPPS 117
+LKY++++LMEE L K + D LAL+ E+ V+ S
Sbjct: 69 LLKYVNQLLMEESLAEKQSIFYDSLALRQTEEMLQQVISDSQTQS 113
>TAIR|locus:2164783 [details] [associations]
symbol:PAT1 "AT5G48150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] Pfam:PF03514 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0009640
GO:GO:0004871 EMBL:AB023039 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF153443 EMBL:BT025326 EMBL:AK117483
IPI:IPI00517897 RefSeq:NP_199626.1 RefSeq:NP_974903.1
UniGene:At.7076 PRIDE:Q9LDL7 EnsemblPlants:AT5G48150.1
EnsemblPlants:AT5G48150.2 GeneID:834867 KEGG:ath:AT5G48150
GeneFarm:4233 TAIR:At5g48150 eggNOG:NOG287245 InParanoid:Q9LDL7
OMA:NSAHARG PhylomeDB:Q9LDL7 ProtClustDB:CLSN2686580
Genevestigator:Q9LDL7 Uniprot:Q9LDL7
Length = 490
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 94/289 (32%), Positives = 159/289 (55%)
Query: 310 DLRGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTP 369
DLR L CA+A++ ND A+ ++++R+ S G+ QRL Y + L A+L + +
Sbjct: 118 DLRADLVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSS 177
Query: 370 MHTHIS-CRTSAADILKAYQMSL-SAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICY 427
++ ++ C A+ L +Y L P+ + Y+ AN I + ++ R+HIIDF I
Sbjct: 178 IYKALNRCPEPASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQ 237
Query: 428 GFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYN 487
G QW LIQ ++RP GPP +RITGI+ + + GNRL ++FNVPFE+N
Sbjct: 238 GSQWVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFN 297
Query: 488 VIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDV-- 545
++ ++ ++ + E VN + ++PD++V + RD +L ++K ++P V
Sbjct: 298 SVSVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVT 357
Query: 546 FIHGISNGTYNAPFFLARFREALFHFSAMFDIFDATVPREDAERMLFER 594
+ SN T A FF RF E + +++AMF+ D T+PR+ +R+ E+
Sbjct: 358 LVEQESN-TNTAAFF-PRFMETMNYYAAMFESIDVTLPRDHKQRINVEQ 404
>TAIR|locus:2174974 [details] [associations]
symbol:AT5G66770 "AT5G66770" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB010700
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY062538 EMBL:BT002580
IPI:IPI00537848 RefSeq:NP_201478.1 UniGene:At.27307
ProteinModelPortal:Q9FL03 IntAct:Q9FL03 PRIDE:Q9FL03
EnsemblPlants:AT5G66770.1 GeneID:836810 KEGG:ath:AT5G66770
GeneFarm:4249 TAIR:At5g66770 eggNOG:NOG324692 HOGENOM:HOG000240374
InParanoid:Q9FL03 OMA:DASCSAP PhylomeDB:Q9FL03
ProtClustDB:CLSN2684429 Genevestigator:Q9FL03 Uniprot:Q9FL03
Length = 584
Score = 405 (147.6 bits), Expect = 9.4e-38, P = 9.4e-38
Identities = 95/280 (33%), Positives = 155/280 (55%)
Query: 318 CAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHTHISCR 377
CA+ ++ +D A++ L QIR S GD T+R+A YF +AL RL ++P + S
Sbjct: 224 CAR-ISDSDPNEASKTLLQIRESVSELGDPTERVAFYFTEALSNRL-SPNSPATS--SSS 279
Query: 378 TSAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWPCLIQI 437
+S D++ +Y+ A P+ + ++L ANQ I + EK+ ++HI+DFGI G QWP L+Q
Sbjct: 280 SSTEDLILSYKTLNDACPYSKFAHLTANQAILEATEKSNKIHIVDFGIVQGIQWPALLQA 339
Query: 438 LSSRPTGPP-MLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETI 496
L++R +G P +R++GI P G P + TGNRL+ + + ++ F++ I +
Sbjct: 340 LATRTSGKPTQIRVSGIPAPSLGESPEPSLIATGNRLRDFAKVLDLNFDFIPILTPIHLL 399
Query: 497 RLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGISNGTYN 556
F++D DEV VN + ++ L D+T + D L L K +NP V G + N
Sbjct: 400 NGSSFRVDPDEVLAVNFMLQLYKLLDET---PTIVDTALRLAKSLNPRVVTLGEYEVSLN 456
Query: 557 APFFLARFREALFHFSAMFDIFDATVPREDAERMLFEREI 596
F R + AL +SA+F+ + + R+ ER+ ERE+
Sbjct: 457 RVGFANRVKNALQFYSAVFESLEPNLGRDSEERVRVEREL 496
>TAIR|locus:2008076 [details] [associations]
symbol:SCL5 "AT1G50600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC079279 EMBL:AC012561
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG287245 EMBL:AY034929 EMBL:AY039611 EMBL:BT000883
EMBL:AF036302 IPI:IPI00519165 PIR:E96542 PIR:T51236
RefSeq:NP_175475.2 UniGene:At.14827 STRING:Q8H125 PaxDb:Q8H125
PRIDE:Q8H125 EnsemblPlants:AT1G50600.1 GeneID:841482
KEGG:ath:AT1G50600 GeneFarm:4229 TAIR:At1g50600 InParanoid:Q8H125
OMA:REERHEP PhylomeDB:Q8H125 ProtClustDB:CLSN2918355
ArrayExpress:Q8H125 Genevestigator:Q8H125 Uniprot:Q8H125
Length = 597
Score = 389 (142.0 bits), Expect = 2.8e-35, P = 2.8e-35
Identities = 95/288 (32%), Positives = 150/288 (52%)
Query: 310 DLRGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTP 369
DL+G+L CA+AV + D + + Q+++ S G+ QRL Y + L ARL + +
Sbjct: 226 DLKGVLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLASSGSS 285
Query: 370 MHTHISCRTSAADILKAYQMSL-SAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYG 428
++ + C+ L Y L A P+ + Y AN I + + + +HIIDF I G
Sbjct: 286 IYKALRCKDPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQISQG 345
Query: 429 FQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNV 488
QW LI+ L +RP GPP +RITGI+ P+ F +E G RL E VPFE++
Sbjct: 346 GQWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFEFHG 405
Query: 489 IAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDV--F 546
A + +E + E VN + ++PD++V + RD +L L+K ++P+V
Sbjct: 406 AALCCTEVEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPNVVTL 465
Query: 547 IHGISNGTYNAPFFLARFREALFHFSAMFDIFDATVPREDAERMLFER 594
+ +N T APF L RF E + H+ A+F+ D + R+ ER+ E+
Sbjct: 466 VEQEAN-TNTAPF-LPRFVETMNHYLAVFESIDVKLARDHKERINVEQ 511
>TAIR|locus:2080345 [details] [associations]
symbol:SCR "SCARECROW" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009956 "radial pattern formation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0008356 "asymmetric cell division"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009630 GO:GO:0008356 GO:GO:0051457 EMBL:AL132957
GO:GO:0010103 GO:GO:0009956 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:U62798 EMBL:AY056315 EMBL:AY080840
EMBL:AY113991 IPI:IPI00524888 PIR:T47581 PIR:T51244
RefSeq:NP_190990.1 UniGene:At.71814 UniGene:At.932 IntAct:Q9M384
STRING:Q9M384 EnsemblPlants:AT3G54220.1 GeneID:824589
KEGG:ath:AT3G54220 GeneFarm:4242 TAIR:At3g54220 eggNOG:NOG311437
InParanoid:Q9M384 OMA:QERENSS PhylomeDB:Q9M384
ProtClustDB:CLSN2915643 Genevestigator:Q9M384 Uniprot:Q9M384
Length = 653
Score = 380 (138.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 95/294 (32%), Positives = 160/294 (54%)
Query: 307 EVVDLRGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGA 366
E + L LL CA+AV++++ AN+ L +I + S+ +G QR+A YF++A+ ARLL +
Sbjct: 286 EGLHLLTLLLQCAEAVSADNLEEANKLLLEISQLSTPYGTSAQRVAAYFSEAMSARLLNS 345
Query: 367 HTPMHTHISCR----TSAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIID 422
++ + R T + ++ A+Q+ P ++ S+ ANQ I++ EK +HIID
Sbjct: 346 CLGIYAALPSRWMPQTHSLKMVSAFQVFNGISPLVKFSHFTANQAIQEAFEKEDSVHIID 405
Query: 423 FGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNV 482
I G QWP L IL+SRP GPP +R+TG+ E ++ TG RL + ++ +
Sbjct: 406 LDIMQGLQWPGLFHILASRPGGPPHVRLTGLGTSM------EALQATGKRLSDFADKLGL 459
Query: 483 PFEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRIN 542
PFE+ +A+K + E + + E V+ + +L D T D+ L L++R+
Sbjct: 460 PFEFCPLAEKVGNLDTERLNVRKREAVAVHWLQH--SLYDVTGSDAH----TLWLLQRLA 513
Query: 543 PDVFIHGISNGTYNAPFFLARFREALFHFSAMFDIFDATVPREDAERMLFEREI 596
P V + + +A FL RF EA+ ++SA+FD A+ E ER + E+++
Sbjct: 514 PKV-VTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQL 566
>TAIR|locus:2044973 [details] [associations]
symbol:SCL21 "AT2G04890" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006955 EMBL:AC007211
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:AF210732 EMBL:AK175210 EMBL:AK175990 EMBL:AK176099
EMBL:AK221099 EMBL:BT026455 IPI:IPI00534889 PIR:G84462
RefSeq:NP_178566.1 UniGene:At.48419 UniGene:At.71110 IntAct:Q9S7H5
EnsemblPlants:AT2G04890.1 GeneID:815036 KEGG:ath:AT2G04890
GeneFarm:4231 TAIR:At2g04890 eggNOG:NOG292869 InParanoid:Q9S7H5
OMA:HKERINI PhylomeDB:Q9S7H5 ProtClustDB:CLSN2912915
Genevestigator:Q9S7H5 Uniprot:Q9S7H5
Length = 413
Score = 350 (128.3 bits), Expect = 1.0e-31, P = 1.0e-31
Identities = 87/286 (30%), Positives = 145/286 (50%)
Query: 310 DLRGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTP 369
DL+ +L CA+AV+ N+ A + ++R S G+ QRL Y + L ARL + +
Sbjct: 49 DLKLVLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSS 108
Query: 370 MHTHISCRTSAADILKAYQMSL-SAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYG 428
++ + R + +Y L P+ + Y+ AN I + + R+HIIDF I G
Sbjct: 109 IYKSLQSREPESYEFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQG 168
Query: 429 FQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNV 488
QW LIQ ++RP G P +RITG+ G + RL+ ++F+VPF +N
Sbjct: 169 SQWIALIQAFAARPGGAPNIRITGV-----G--DGSVLVTVKKRLEKLAKKFDVPFRFNA 221
Query: 489 IAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIH 548
+++ + +E+ + E VN + + +LPD++V + RD +L ++K ++P V
Sbjct: 222 VSRPSCEVEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKVVTL 281
Query: 549 GISNGTYNAPFFLARFREALFHFSAMFDIFDATVPREDAERMLFER 594
N FL RF E L +++AMF+ D +PR ER+ E+
Sbjct: 282 VEQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQ 327
>TAIR|locus:2026982 [details] [associations]
symbol:SCL1 "AT1G21450" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
EMBL:AC015447 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF210731 EMBL:AY045833 EMBL:AY096626
EMBL:AY084492 EMBL:AF036300 IPI:IPI00538394 PIR:E86347 PIR:T51234
RefSeq:NP_173566.1 UniGene:At.14825 ProteinModelPortal:Q9SDQ3
STRING:Q9SDQ3 PaxDb:Q9SDQ3 PRIDE:Q9SDQ3 EnsemblPlants:AT1G21450.1
GeneID:838743 KEGG:ath:AT1G21450 GeneFarm:4232 TAIR:At1g21450
eggNOG:NOG324880 InParanoid:Q9SDQ3 OMA:SINDEWA PhylomeDB:Q9SDQ3
ProtClustDB:CLSN2913658 Genevestigator:Q9SDQ3 Uniprot:Q9SDQ3
Length = 593
Score = 342 (125.4 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 86/284 (30%), Positives = 143/284 (50%)
Query: 314 LLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHTH 373
+L CA+A++ A + ++R+ S GD +QR+A Y + L AR+ + ++
Sbjct: 225 ILISCARALSEGKLEEALSMVNELRQIVSIQGDPSQRIAAYMVEGLAARMAASGKFIYRA 284
Query: 374 ISCRTSAADI-LKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWP 432
+ C+ +D L A Q+ P + +L AN I + + +HIIDF I G Q+
Sbjct: 285 LKCKEPPSDERLAAMQVLFEVCPCFKFGFLAANGAILEAIKGEEEVHIIDFDINQGNQYM 344
Query: 433 CLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQK 492
LI+ ++ P P LR+TGI+ P+ R + G RL+ E V F++ + K
Sbjct: 345 TLIRSIAELPGKRPRLRLTGIDDPESVQRSIGGLRIIGLRLEQLAEDNGVSFKFKAMPSK 404
Query: 493 WETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPD-VFIHGIS 551
+ E +VN ++ ++PD++V + RD +L ++K +NP V +
Sbjct: 405 TSIVSPSTLGCKPGETLIVNFAFQLHHMPDESVTTVNQRDELLHMVKSLNPKLVTVVEQD 464
Query: 552 NGTYNAPFFLARFREALFHFSAMFDIFDATVPREDAERMLFERE 595
T +PFF RF EA ++SA+F+ D T+PRE ERM ER+
Sbjct: 465 VNTNTSPFF-PRFIEAYEYYSAVFESLDMTLPRESQERMNVERQ 507
Score = 38 (18.4 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 81 LMEEDLEGKTCMLQDCLALQAAEKSFYD 108
+ + D C+ D Q+ EK F D
Sbjct: 49 IFDPDRSKNPCLTDDSYPSQSYEKYFLD 76
>TAIR|locus:2101694 [details] [associations]
symbol:AT3G50650 "AT3G50650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132979
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000240374
ProtClustDB:CLSN2684429 EMBL:AK229252 EMBL:AF036304 IPI:IPI00542878
PIR:T46142 PIR:T51238 RefSeq:NP_190634.1 UniGene:At.42939
PaxDb:Q9SCR0 PRIDE:Q9SCR0 EnsemblPlants:AT3G50650.1 GeneID:824228
KEGG:ath:AT3G50650 GeneFarm:4248 TAIR:At3g50650 eggNOG:NOG329237
InParanoid:Q9SCR0 OMA:LIRIKES PhylomeDB:Q9SCR0
Genevestigator:Q9SCR0 Uniprot:Q9SCR0
Length = 542
Score = 335 (123.0 bits), Expect = 4.6e-28, P = 4.6e-28
Identities = 82/267 (30%), Positives = 136/267 (50%)
Query: 329 TANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHTHISCRTSAADILKAYQ 388
T + L +I+ S GD QR+ +YFA+AL + +P S +S D + +Y+
Sbjct: 190 TKPDTLIRIKESVSESGDPIQRVGYYFAEALSHK--ETESPSS---SSSSSLEDFILSYK 244
Query: 389 MSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPM- 447
A P+ + ++L ANQ I + ++ +HI+DFGI G QW L+Q L++R +G P
Sbjct: 245 TLNDACPYSKFAHLTANQAILEATNQSNNIHIVDFGIFQGIQWSALLQALATRSSGKPTR 304
Query: 448 LRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETIRLEDFKIDRDE 507
+RI+GI P G P + TGNRL+ + ++ FE+ + + + F++D DE
Sbjct: 305 IRISGIPAPSLGDSPGPSLIATGNRLRDFAAILDLNFEFYPVLTPIQLLNGSSFRVDPDE 364
Query: 508 VTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGISNGTYNAPFFLARFREA 567
V VVN + + L D+T L L + +NP + G + N F R + +
Sbjct: 365 VLVVNFMLELYKLLDETATTVG---TALRLARSLNPRIVTLGEYEVSLNRVEFANRVKNS 421
Query: 568 LFHFSAMFDIFDATVPREDAERMLFER 594
L +SA+F+ + + R+ ER+ ER
Sbjct: 422 LRFYSAVFESLEPNLDRDSKERLRVER 448
>TAIR|locus:2008086 [details] [associations]
symbol:SCL3 "AT1G50420" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 EMBL:AC012561 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY056154 EMBL:AY091260 EMBL:AF036301
IPI:IPI00539428 PIR:E96540 PIR:T51235 RefSeq:NP_175459.1
UniGene:At.14826 IntAct:Q9LPR8 STRING:Q9LPR8
EnsemblPlants:AT1G50420.1 GeneID:841464 KEGG:ath:AT1G50420
GeneFarm:4258 TAIR:At1g50420 eggNOG:NOG310008 InParanoid:Q9LPR8
OMA:MVHVIDL PhylomeDB:Q9LPR8 ProtClustDB:CLSN2913643
Genevestigator:Q9LPR8 Uniprot:Q9LPR8
Length = 482
Score = 270 (100.1 bits), Expect = 6.6e-26, Sum P(2) = 6.6e-26
Identities = 62/205 (30%), Positives = 107/205 (52%)
Query: 314 LLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHTH 373
LL CA VAS + AN L+Q+ +S GD QR+A YF +AL R+L + ++
Sbjct: 57 LLLTCANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRILKSWPGLYKA 116
Query: 374 ISC---RTS-AADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGF 429
++ RT+ ++ + ++ +P +++SYL N+ I + E +H+ID
Sbjct: 117 LNATQTRTNNVSEEIHVRRLFFEMFPILKVSYLLTNRAILEAMEGEKMVHVIDLDASEPA 176
Query: 430 QWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVI 489
QW L+Q +SRP GPP LRITG+ E +E+ +RL E+ ++PF++N +
Sbjct: 177 QWLALLQAFNSRPEGPPHLRITGVH------HQKEVLEQMAHRLIEEAEKLDIPFQFNPV 230
Query: 490 AQKWETIRLEDFKIDRDEVTVVNCV 514
+ + + +E ++ E V+ V
Sbjct: 231 VSRLDCLNVEQLRVKTGEALAVSSV 255
Score = 140 (54.3 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 44/159 (27%), Positives = 70/159 (44%)
Query: 377 RTS-AADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWPCLI 435
RT+ ++ + ++ +P +++SYL N+ I + E +H+ID QW L+
Sbjct: 123 RTNNVSEEIHVRRLFFEMFPILKVSYLLTNRAILEAMEGEKMVHVIDLDASEPAQWLALL 182
Query: 436 QILSSRPTGPPMLRITGIE-----LPQPGFRPAERVEETG-----NRLKSYCERFNVP-- 483
Q +SRP GPP LRITG+ L Q R E E+ N + S + NV
Sbjct: 183 QAFNSRPEGPPHLRITGVHHQKEVLEQMAHRLIEEAEKLDIPFQFNPVVSRLDCLNVEQL 242
Query: 484 -FEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLP 521
+ ++L F D++ NC R +N P
Sbjct: 243 RVKTGEALAVSSVLQLHTFLASDDDLMRKNCALRFQNNP 281
Score = 90 (36.7 bits), Expect = 6.6e-26, Sum P(2) = 6.6e-26
Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 528 SSPR-DAVLDLIKRINPDVFIHGISNGTYNAPFFLARFREALFHFSAMFDIFDATVPR-- 584
SS R D+ L+ I ++P V + + +N + R E+L+ ++A+FD + VPR
Sbjct: 325 SSGRTDSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTS 384
Query: 585 ED---AERMLFEREI 596
+D E+MLF EI
Sbjct: 385 QDRIKVEKMLFGEEI 399
>TAIR|locus:2165685 [details] [associations]
symbol:AT5G41920 "AT5G41920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB017067
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:BT029760 IPI:IPI00535918 RefSeq:NP_199007.1 UniGene:At.67848
UniGene:At.72727 IntAct:Q9FHZ1 DNASU:834197
EnsemblPlants:AT5G41920.1 GeneID:834197 KEGG:ath:AT5G41920
GeneFarm:4246 TAIR:At5g41920 eggNOG:NOG72098 InParanoid:Q9FHZ1
OMA:PWKGYTL PhylomeDB:Q9FHZ1 ProtClustDB:CLSN2686419
Genevestigator:Q9FHZ1 Uniprot:Q9FHZ1
Length = 405
Score = 296 (109.3 bits), Expect = 3.7e-25, P = 3.7e-25
Identities = 88/294 (29%), Positives = 139/294 (47%)
Query: 309 VDLRGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLL---- 364
+ L LL CA+ VA++ R A+ L +I S FG +R+ YFA AL+ R++
Sbjct: 38 IKLLSLLLQCAEYVATDHLREASTLLSEISEICSPFGSSPERVVAYFAQALQTRVISSYL 97
Query: 365 -GAHTPMHTHISCRTSAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDF 423
GA +P+ + I A Q S P I+ S+ ANQ I + + +HIID
Sbjct: 98 SGACSPLSEKPLTVVQSQKIFSALQTYNSVSPLIKFSHFTANQAIFQALDGEDSVHIIDL 157
Query: 424 GICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP 483
+ G QWP L IL+SRP +RITG G ++ + TG RL + N+P
Sbjct: 158 DVMQGLQWPALFHILASRPRKLRSIRITGF-----G-SSSDLLASTGRRLADFASSLNLP 211
Query: 484 FEYNVIAQK-WETIRLEDFKIDRDEVTVVNCV-HRMKNLPDDTVVDSSPRDAVLDLIKRI 541
FE++ I I + E VV+ + HR+ ++ + + L++++R+
Sbjct: 212 FEFHPIEGIIGNLIDPSQLATRQGEAVVVHWMQHRLYDVTGNNL-------ETLEILRRL 264
Query: 542 NPDVFIHGISNGTYN-APFFLARFREALFHFSAMFDIFDATVPREDAERMLFER 594
P++ +Y+ FL RF EAL ++SA+FD + E ER E+
Sbjct: 265 KPNLITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGEESGERFTVEQ 318
>TAIR|locus:2099624 [details] [associations]
symbol:RGL2 "RGA-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0010187 "negative regulation of seed
germination" evidence=IMP] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:2000377 "regulation of reactive oxygen species metabolic
process" evidence=IGI] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] Pfam:PF03514 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154 GO:GO:0006952
GO:GO:0009723 GO:GO:0003700 GO:GO:0006351 GO:GO:0010187
GO:GO:0009908 GO:GO:0042538 EMBL:AC009895 GO:GO:2000377
GO:GO:0040029 GO:GO:0009867 GO:GO:0009863 GO:GO:0009740
eggNOG:NOG243696 HOGENOM:HOG000238577 KO:K14494 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AK118009 IPI:IPI00521981 RefSeq:NP_186995.1
UniGene:At.18489 UniGene:At.67027 ProteinModelPortal:Q8GXW1
SMR:Q8GXW1 IntAct:Q8GXW1 STRING:Q8GXW1 EnsemblPlants:AT3G03450.1
GeneID:821251 KEGG:ath:AT3G03450 GeneFarm:4240 TAIR:At3g03450
InParanoid:Q8GXW1 OMA:MLSELNN PhylomeDB:Q8GXW1
ProtClustDB:CLSN2684085 Genevestigator:Q8GXW1 GermOnline:AT3G03450
Uniprot:Q8GXW1
Length = 547
Score = 308 (113.5 bits), Expect = 7.4e-25, P = 7.4e-25
Identities = 78/282 (27%), Positives = 137/282 (48%)
Query: 315 LTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHTHI 374
L CA+A+ + A+ +K++ + + ++A YFA AL R+ +T T +
Sbjct: 184 LVACAEAIHQENLNLADALVKRVGTLAGSQAGAMGKVATYFAQALARRIYRDYTA-ETDV 242
Query: 375 SCRTSAADILKAYQMSL-SAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWPC 433
C + +M + P+++ ++ ANQ I + A R+H+ID G+ G QWP
Sbjct: 243 -CAAVNPSFEEVLEMHFYESCPYLKFAHFTANQAILEAVTTARRVHVIDLGLNQGMQWPA 301
Query: 434 LIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYN-VIAQK 492
L+Q L+ RP GPP R+TGI PQ ++ +++ G +L + + V FE+ + A+
Sbjct: 302 LMQALALRPGGPPSFRLTGIGPPQT--ENSDSLQQLGWKLAQFAQNMGVEFEFKGLAAES 359
Query: 493 WETIRLEDFKI-DRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGIS 551
+ E F+ E VVN V + L + S + +L+ +K I P +
Sbjct: 360 LSDLEPEMFETRPESETLVVNSVFELHRL----LARSGSIEKLLNTVKAIKPSIVTVVEQ 415
Query: 552 NGTYNAPFFLARFREALFHFSAMFDIFDATVPREDAERMLFE 593
+N FL RF EAL ++S++FD + + +R++ E
Sbjct: 416 EANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVMSE 457
>TAIR|locus:2006747 [details] [associations]
symbol:GAI "GIBBERELLIC ACID INSENSITIVE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA;TAS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010233 "phloem transport"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IGI]
[GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0010187 "negative regulation of seed germination" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0006808 "regulation of nitrogen utilization"
evidence=IMP] Pfam:PF03514 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0010218 GO:GO:0010187
GO:GO:0006808 GO:GO:0042538 GO:GO:2000377 EMBL:AC006917
GO:GO:0010233 GO:GO:0040029 GO:GO:0009867 GO:GO:0009863
GO:GO:0009740 EMBL:Y11337 EMBL:Y15193 EMBL:AY058194 EMBL:AY142002
IPI:IPI00535232 PIR:H86282 RefSeq:NP_172945.1 UniGene:At.15032
UniGene:At.75604 PDB:2ZSH PDB:2ZSI PDBsum:2ZSH PDBsum:2ZSI
ProteinModelPortal:Q9LQT8 SMR:Q9LQT8 DIP:DIP-32985N IntAct:Q9LQT8
STRING:Q9LQT8 EnsemblPlants:AT1G14920.1 GeneID:838057
KEGG:ath:AT1G14920 GeneFarm:4235 TAIR:At1g14920 eggNOG:NOG243696
HOGENOM:HOG000238577 InParanoid:Q9LQT8 KO:K14494 OMA:RRVYRFR
PhylomeDB:Q9LQT8 ProtClustDB:CLSN2682993 EvolutionaryTrace:Q9LQT8
Genevestigator:Q9LQT8 GermOnline:AT1G14920 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 Uniprot:Q9LQT8
Length = 533
Score = 302 (111.4 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 82/275 (29%), Positives = 135/275 (49%)
Query: 315 LTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHTHI 374
L CA+AV + A +KQI + + +++A YFA+AL AR + +P + I
Sbjct: 173 LLACAEAVQKENLTVAEALVKQIGFLAVSQIGAMRKVATYFAEAL-ARRIYRLSPSQSPI 231
Query: 375 SCRTSAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWPCL 434
S +D L+ + P+++ ++ ANQ I + + R+H+IDF + G QWP L
Sbjct: 232 D--HSLSDTLQMH--FYETCPYLKFAHFTANQAILEAFQGKKRVHVIDFSMSQGLQWPAL 287
Query: 435 IQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYN-VIAQKW 493
+Q L+ RP GPP+ R+TGI P P + + E G +L E +V FEY +A
Sbjct: 288 MQALALRPGGPPVFRLTGIGPPAPD--NFDYLHEVGCKLAHLAEAIHVEFEYRGFVANTL 345
Query: 494 ETIRLEDFKIDRDEV--TVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGIS 551
+ ++ E+ VN V + L + D VL ++ +I P++F
Sbjct: 346 ADLDASMLELRPSEIESVAVNSVFELHKL----LGRPGAIDKVLGVVNQIKPEIFTVVEQ 401
Query: 552 NGTYNAPFFLARFREALFHFSAMFDIFDATVPRED 586
+N+P FL RF E+L ++S +FD + +D
Sbjct: 402 ESNHNSPIFLDRFTESLHYYSTLFDSLEGVPSGQD 436
>TAIR|locus:2005516 [details] [associations]
symbol:RGA1 "REPRESSOR OF GA1-3 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IGI;RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IGI;RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=IGI;RCA] [GO:0010029 "regulation of seed
germination" evidence=IGI] [GO:2000033 "regulation of seed dormancy
process" evidence=IGI] [GO:0010187 "negative regulation of seed
germination" evidence=IGI] [GO:0010218 "response to far red light"
evidence=IEP] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IGI] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0042176
"regulation of protein catabolic process" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0046686
"response to cadmium ion" evidence=RCA] [GO:0048444 "floral organ
morphogenesis" evidence=RCA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IGI]
Pfam:PF03514 GO:GO:0007275 GO:GO:0009737 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009723 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010187 GO:GO:0042176
GO:GO:0042538 EMBL:AC005560 GO:GO:2000377 GO:GO:0040029
GO:GO:0009867 GO:GO:0009740 eggNOG:NOG243696 HOGENOM:HOG000238577
KO:K14494 ProtClustDB:CLSN2682993 GO:GO:0009938 GO:GO:2000033
InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
EMBL:Y11336 EMBL:Y15194 EMBL:AY052239 EMBL:AY054160 EMBL:BT010467
IPI:IPI00523272 PIR:D84426 RefSeq:NP_178266.1 UniGene:At.24012
ProteinModelPortal:Q9SLH3 SMR:Q9SLH3 IntAct:Q9SLH3 STRING:Q9SLH3
PRIDE:Q9SLH3 EnsemblPlants:AT2G01570.1 GeneID:814686
KEGG:ath:AT2G01570 GeneFarm:4238 TAIR:At2g01570 InParanoid:Q9SLH3
OMA:VHALMAC PhylomeDB:Q9SLH3 Genevestigator:Q9SLH3
GermOnline:AT2G01570 Uniprot:Q9SLH3
Length = 587
Score = 302 (111.4 bits), Expect = 4.7e-24, P = 4.7e-24
Identities = 80/275 (29%), Positives = 131/275 (47%)
Query: 315 LTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHTHI 374
L CA+A+ N+ A +KQI + + +++A YFA+AL R+ P +
Sbjct: 225 LMACAEAIQQNNLTLAEALVKQIGCLAVSQAGAMRKVATYFAEALARRIYRLSPPQNQID 284
Query: 375 SCRTSAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWPCL 434
C +D L+ + P+++ ++ ANQ I + E R+H+IDF + G QWP L
Sbjct: 285 HC---LSDTLQMH--FYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPAL 339
Query: 435 IQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYN-VIAQKW 493
+Q L+ R GPP R+TGI P P ++ + E G +L E +V FEY +A
Sbjct: 340 MQALALREGGPPTFRLTGIGPPAPD--NSDHLHEVGCKLAQLAEAIHVEFEYRGFVANSL 397
Query: 494 ETI--RLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGIS 551
+ + + + E VN V + L + + VL ++K+I P +F
Sbjct: 398 ADLDASMLELRPSDTEAVAVNSVFELHKL----LGRPGGIEKVLGVVKQIKPVIFTVVEQ 453
Query: 552 NGTYNAPFFLARFREALFHFSAMFDIFDATVPRED 586
+N P FL RF E+L ++S +FD + +D
Sbjct: 454 ESNHNGPVFLDRFTESLHYYSTLFDSLEGVPNSQD 488
>TAIR|locus:2201557 [details] [associations]
symbol:RGL1 "RGA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IGI;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0005634 GO:GO:0030154 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0009908 GO:GO:0042538
GO:GO:2000377 EMBL:AC020665 GO:GO:0040029 GO:GO:0009867
GO:GO:0009863 GO:GO:0009740 HOGENOM:HOG000238577 KO:K14494
GO:GO:0009938 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AJ224957 EMBL:AY048749 EMBL:AY070035
EMBL:AY096506 IPI:IPI00518407 PIR:G96688 RefSeq:NP_176809.1
UniGene:At.26400 UniGene:At.75607 ProteinModelPortal:Q9C8Y3
SMR:Q9C8Y3 IntAct:Q9C8Y3 STRING:Q9C8Y3 EnsemblPlants:AT1G66350.1
GeneID:842953 KEGG:ath:AT1G66350 GeneFarm:4239 TAIR:At1g66350
eggNOG:NOG314007 InParanoid:Q9C8Y3 OMA:TSAWRIN PhylomeDB:Q9C8Y3
ProtClustDB:CLSN2914366 Genevestigator:Q9C8Y3 GermOnline:AT1G66350
Uniprot:Q9C8Y3
Length = 511
Score = 292 (107.8 bits), Expect = 3.9e-23, P = 3.9e-23
Identities = 81/274 (29%), Positives = 133/274 (48%)
Query: 315 LTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHTHI 374
L CA+AV N+ + A+ +K + +S+ +++A YFA+ L R+ + +
Sbjct: 156 LLACAEAVQQNNLKLADALVKHVGLLASSQAGAMRKVATYFAEGLARRIYRIYPRDDVAL 215
Query: 375 SCRTSAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWPCL 434
S S +D L+ + + P+++ ++ ANQ I ++ A ++H+ID G+ +G QWP L
Sbjct: 216 S---SFSDTLQIH--FYESCPYLKFAHFTANQAILEVFATAEKVHVIDLGLNHGLQWPAL 270
Query: 435 IQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIA-QKW 493
IQ L+ RP GPP R+TGI G+ + ++E G +L V FE+ IA
Sbjct: 271 IQALALRPNGPPDFRLTGI-----GYSLTD-IQEVGWKLGQLASTIGVNFEFKSIALNNL 324
Query: 494 ETIRLEDFKIDRD-EVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGISN 552
++ E I E VN V + L + D L IK I PD+
Sbjct: 325 SDLKPEMLDIRPGLESVAVNSVFELHRL----LAHPGSIDKFLSTIKSIRPDIMTVVEQE 380
Query: 553 GTYNAPFFLARFREALFHFSAMFDIFDATVPRED 586
+N FL RF E+L ++S++FD + P +D
Sbjct: 381 ANHNGTVFLDRFTESLHYYSSLFDSLEGP-PSQD 413
>TAIR|locus:2020487 [details] [associations]
symbol:LAS "AT1G55580" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010223 "secondary shoot formation" evidence=IMP]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC002328 GO:GO:0010223
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG323432 EMBL:AY196482 EMBL:BT026519 EMBL:EF598379
EMBL:EF598380 EMBL:EF598381 EMBL:EF598382 EMBL:EF598383
EMBL:EF598384 EMBL:EF598385 EMBL:EF598386 EMBL:EF598387
EMBL:EF598388 EMBL:EF598389 EMBL:EF598390 EMBL:EF598391
EMBL:EF598392 EMBL:EF598393 EMBL:EF598394 EMBL:EF598395
EMBL:EF598396 EMBL:EF598397 EMBL:EF598398 EMBL:EF598399
EMBL:EF598400 EMBL:EF598401 EMBL:EF598402 IPI:IPI00532485
RefSeq:NP_175954.1 UniGene:At.45199 STRING:Q9ZWC5
EnsemblPlants:AT1G55580.1 GeneID:842007 KEGG:ath:AT1G55580
GeneFarm:4247 TAIR:At1g55580 InParanoid:Q9ZWC5 OMA:EREANHG
PhylomeDB:Q9ZWC5 ProtClustDB:CLSN2682663 Genevestigator:Q9ZWC5
Uniprot:Q9ZWC5
Length = 445
Score = 238 (88.8 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 74/232 (31%), Positives = 106/232 (45%)
Query: 377 RTSAADILKAYQMSLSAW-PFIRMSYLFANQTIRKLAEKATR--LHIIDFGICYGFQWPC 433
+ + +D Y + L+ PFIR +L ANQ I E LHI+D I G QWP
Sbjct: 135 KNNNSDFESCYYLWLNQLTPFIRFGHLTANQAILDATETNDNGALHILDLDISQGLQWPP 194
Query: 434 LIQIL---SSRPTGPP-MLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVI 489
L+Q L SS P+ PP LRITG G R + TG+RL + + + F+++ +
Sbjct: 195 LMQALAERSSNPSSPPPSLRITGC-----G-RDVTGLNRTGDRLTRFADSLGLQFQFHTL 248
Query: 490 AQKWET-------IRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRIN 542
E IRL + E VNCVH + + +D D L IK +N
Sbjct: 249 VIVEEDLAGLLLQIRLLALSAVQGETIAVNCVHFLHKIFND---DGDMIGHFLSAIKSLN 305
Query: 543 PDVFIHGISNGTYNAPFFLARFREALFHFSAMFDIFDATVPREDAERMLFER 594
+ + FL RF EA+ H+ A+FD +AT+P ER+ E+
Sbjct: 306 SRIVTMAEREANHGDHSFLNRFSEAVDHYMAIFDSLEATLPPNSRERLTLEQ 357
Score = 81 (33.6 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 20/53 (37%), Positives = 27/53 (50%)
Query: 311 LRGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARL 363
LR LL A V+ ++ A L + +SS GD T+RL H F AL R+
Sbjct: 41 LRRLLFTAANFVSQSNFTAAQNLLSILSLNSSPHGDSTERLVHLFTKALSVRI 93
>TAIR|locus:2132482 [details] [associations]
symbol:AT4G08250 "AT4G08250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AL080252 EMBL:AL161510
EMBL:BT011797 IPI:IPI00529829 PIR:T10552 RefSeq:NP_192565.1
UniGene:At.50325 DNASU:826375 EnsemblPlants:AT4G08250.1
GeneID:826375 KEGG:ath:AT4G08250 GeneFarm:4263 TAIR:At4g08250
eggNOG:NOG320032 HOGENOM:HOG000239937 InParanoid:Q9SUF5 OMA:SLEAGFP
PhylomeDB:Q9SUF5 ProtClustDB:CLSN2685964 Genevestigator:Q9SUF5
Uniprot:Q9SUF5
Length = 483
Score = 274 (101.5 bits), Expect = 3.6e-21, P = 3.6e-21
Identities = 86/290 (29%), Positives = 130/290 (44%)
Query: 314 LLTLCAQA-VASNDQRTANEQLKQIRRHSSAFGDGT--QRLAHYFADALEARLLGAHTPM 370
LL A A +N R + + + GD T +RLA +F + L ++LL + +
Sbjct: 107 LLVAAADASTGANKSRELTRVILARLKDLVSPGDRTNMERLAAHFTNGL-SKLLERDSVL 165
Query: 371 --HTHISCRTSAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYG 428
H AD++ A+++ + P++ YL A Q I + + R+HI+D+ I G
Sbjct: 166 CPQQHRDDVYDQADVISAFELLQNMSPYVNFGYLTATQAILEAVKYERRIHIVDYDINEG 225
Query: 429 FQWPCLIQILSSRPTGPPM--LRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEY 486
QW L+Q L SR TGP LRIT + G + V+ETG RL ++ + PF Y
Sbjct: 226 VQWASLMQALVSRNTGPSAQHLRITALSRATNGKKSVAAVQETGRRLTAFADSIGQPFSY 285
Query: 487 NVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDV- 545
K+ R E V+NC M +LP + S + L K +NP +
Sbjct: 286 QHCKLDTNAFSTSSLKLVRGEAVVINC---MLHLPRFSHQTPSSVISFLSEAKTLNPKLV 342
Query: 546 -FIHGISNGTYNAPFFLARFREALFHFSAMFDIFDATVPREDAERMLFER 594
+H G FL RF + L FSA+FD +A + + R ER
Sbjct: 343 TLVHE-EVGLMGNQGFLYRFMDLLHQFSAIFDSLEAGLSIANPARGFVER 391
>TAIR|locus:2157477 [details] [associations]
symbol:RGL3 "RGA-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP;ISS] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0048444 "floral
organ morphogenesis" evidence=RCA] Pfam:PF03514 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0040029 EMBL:AL391150 GO:GO:0009740
HOGENOM:HOG000238577 KO:K14494 InterPro:IPR021914
InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
ProtClustDB:CLSN2684085 EMBL:AK117226 EMBL:BT005905 IPI:IPI00544591
PIR:T51475 RefSeq:NP_197251.1 UniGene:At.31541
ProteinModelPortal:Q9LF53 SMR:Q9LF53 PaxDb:Q9LF53 PRIDE:Q9LF53
EnsemblPlants:AT5G17490.1 GeneID:831615 KEGG:ath:AT5G17490
GeneFarm:4241 TAIR:At5g17490 eggNOG:NOG300920 InParanoid:Q9LF53
OMA:RRIYRIH PhylomeDB:Q9LF53 Genevestigator:Q9LF53
GermOnline:AT5G17490 Uniprot:Q9LF53
Length = 523
Score = 275 (101.9 bits), Expect = 3.8e-21, P = 3.8e-21
Identities = 82/281 (29%), Positives = 135/281 (48%)
Query: 315 LTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHTHI 374
L CA+AV + A+ +K++ +++ ++A YFA+AL R+ H P I
Sbjct: 161 LVACAEAVQLENLSLADALVKRVGLLAASQAGAMGKVATYFAEALARRIYRIH-PSAAAI 219
Query: 375 SCRTSAADILKAYQMSL-SAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWPC 433
S +IL QM+ + P+++ ++ ANQ I + + +H+ID G+ G QWP
Sbjct: 220 D--PSFEEIL---QMNFYDSCPYLKFAHFTANQAILEAVTTSRVVHVIDLGLNQGMQWPA 274
Query: 434 LIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKW 493
L+Q L+ RP GPP R+TG+ P R E ++E G +L + V F++N +
Sbjct: 275 LMQALALRPGGPPSFRLTGVG--NPSNR--EGIQELGWKLAQLAQAIGVEFKFNGLT--- 327
Query: 494 ETIRLEDFKID------RDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFI 547
T RL D + D E VVN V + P + + +L +K + P +
Sbjct: 328 -TERLSDLEPDMFETRTESETLVVNSVFELH--P--VLSQPGSIEKLLATVKAVKPGLVT 382
Query: 548 HGISNGTYNAPFFLARFREALFHFSAMFDIFD--ATVPRED 586
+N FL RF EAL ++S++FD + +P +D
Sbjct: 383 VVEQEANHNGDVFLDRFNEALHYYSSLFDSLEDGVVIPSQD 423
>TAIR|locus:2120106 [details] [associations]
symbol:SHR "AT4G37650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008356 "asymmetric cell division"
evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
[GO:0032350 "regulation of hormone metabolic process" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055072 "iron ion
homeostasis" evidence=IMP] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0007049 EMBL:AL035605 EMBL:AL161591
GO:GO:0048366 GO:GO:0008356 GO:GO:0055072 GO:GO:0009956
GO:GO:0032350 InterPro:IPR005202 PROSITE:PS50985 EMBL:AF233752
EMBL:BT033026 EMBL:AY074547 IPI:IPI00525426 PIR:T04722
RefSeq:NP_195480.1 UniGene:At.2816 UniGene:At.71893 IntAct:Q9SZF7
STRING:Q9SZF7 PaxDb:Q9SZF7 PRIDE:Q9SZF7 EnsemblPlants:AT4G37650.1
GeneID:829919 KEGG:ath:AT4G37650 GeneFarm:4260 TAIR:At4g37650
eggNOG:NOG301144 HOGENOM:HOG000078767 InParanoid:Q9SZF7 OMA:EIGNRME
PhylomeDB:Q9SZF7 ProtClustDB:CLSN2685807 Genevestigator:Q9SZF7
Uniprot:Q9SZF7
Length = 531
Score = 273 (101.2 bits), Expect = 6.7e-21, P = 6.7e-21
Identities = 83/305 (27%), Positives = 141/305 (46%)
Query: 314 LLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAH------ 367
+L A+A + D A + L + SS +GD Q+LA YF AL R+ G+
Sbjct: 146 VLLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGERCYRT 205
Query: 368 --TPMHTHISC--RTSAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDF 423
T T +C ++ +LK ++S P+ ++ AN I + + ++HI+D
Sbjct: 206 MVTAAATEKTCSFESTRKTVLKFQEVS----PWATFGHVAANGAILEAVDGEAKIHIVDI 261
Query: 424 GICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRP---AERV-EETGNRLKSYCER 479
+ QWP L++ L++R P LR+T + + + R+ +E GNR++ +
Sbjct: 262 SSTFCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASHRMMKEIGNRMEKFARL 321
Query: 480 FNVPFEYNVIAQKWETIR--LEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDL 537
VPF++N+I + L + + DEV +NCV M + SPRDAV+
Sbjct: 322 MGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGIASR----GSPRDAVISS 377
Query: 538 IKRINPDVF--------IHGISNGTYNAPFFLARFREALFHFSAMFDIFDATVPREDAER 589
+R+ P + + G G ++ F L F E L F F+ ++ + PR ER
Sbjct: 378 FRRLRPRIVTVVEEEADLVGEEEGGFDDEF-LRGFGECLRWFRVCFESWEESFPRTSNER 436
Query: 590 MLFER 594
++ ER
Sbjct: 437 LMLER 441
>TAIR|locus:2015243 [details] [associations]
symbol:AT1G63100 "AT1G63100" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 EMBL:AC010795 InterPro:IPR005202 PROSITE:PS50985
IPI:IPI00520577 PIR:D96656 RefSeq:NP_176498.1 UniGene:At.66082
ProteinModelPortal:Q9CAN3 SMR:Q9CAN3 PRIDE:Q9CAN3
EnsemblPlants:AT1G63100.1 GeneID:842613 KEGG:ath:AT1G63100
GeneFarm:4261 TAIR:At1g63100 eggNOG:NOG286854 HOGENOM:HOG000241666
InParanoid:Q9CAN3 OMA:RTKCENE PhylomeDB:Q9CAN3
ProtClustDB:CLSN2682380 Genevestigator:Q9CAN3 Uniprot:Q9CAN3
Length = 658
Score = 275 (101.9 bits), Expect = 7.2e-21, P = 7.2e-21
Identities = 96/299 (32%), Positives = 137/299 (45%)
Query: 310 DLRGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQ-RLAHYFADALEARLLGAHT 368
+L LLT C A+ S + N + + +S G RL Y+ +AL R+
Sbjct: 273 ELVNLLTGCLDAIRSRNIAAINHFIARTGDLASPRGRTPMTRLIAYYIEALALRV-ARMW 331
Query: 369 PMHTHISC-----RTSAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDF 423
P HI+ RT + A + P + + AN+ + + E R+HIIDF
Sbjct: 332 PHIFHIAPPREFDRTVEDESGNALRFLNQVTPIPKFIHFTANEMLLRAFEGKERVHIIDF 391
Query: 424 GICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP 483
I G QWP Q L+SR P +RITGI G E + ETG+RL + E N+
Sbjct: 392 DIKQGLQWPSFFQSLASRINPPHHVRITGI-----GESKLE-LNETGDRLHGFAEAMNLQ 445
Query: 484 FEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRM-KNLPDDTVVDSSPRDAVLDLIKRIN 542
FE++ + + E +RL + E VNCV +M K L D T ++ RD L LI+ N
Sbjct: 446 FEFHPVVDRLEDVRLWMLHVKEGESVAVNCVMQMHKTLYDGT--GAAIRD-FLGLIRSTN 502
Query: 543 PDVFIHGISNGTYNAPFFLARFREALFHFSAMFDIFD---AT--VPREDAERMLFEREI 596
P + +N+ R +L ++SAMFD AT + R E MLF REI
Sbjct: 503 PIALVLAEQEAEHNSEQLETRVCNSLKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREI 561
>UNIPROTKB|Q84MM9 [details] [associations]
symbol:MOC1 "Protein MONOCULM 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0010014 "meristem initiation" evidence=IMP] Pfam:PF03514
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY242058 EMBL:AP003616 Gramene:Q84MM9
eggNOG:NOG323432 GO:GO:0010014 Uniprot:Q84MM9
Length = 441
Score = 208 (78.3 bits), Expect = 8.9e-18, Sum P(2) = 8.9e-18
Identities = 59/181 (32%), Positives = 89/181 (49%)
Query: 312 RGLLTLCAQAVASNDQRTANEQLKQI-RRHSSAFGDGTQRLAHYFADALEARLLGAHTPM 370
R LL CA + D A + + +S GD RLA++FA AL R+ A
Sbjct: 51 RDLLLACADLLQRGDLPAARRAAEIVLAAAASPRGDAADRLAYHFARALALRV-DAKAG- 108
Query: 371 HTHISCRTSAADILK--AYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYG 428
H H+ AA AY PF+R ++L ANQ I + + A R+HI+D +G
Sbjct: 109 HGHVVVGGGAARPASSGAYLAFNQIAPFLRFAHLTANQAILEAVDGARRVHILDLDAVHG 168
Query: 429 FQWPCLIQILSSR--PT-GPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFE 485
QWP L+Q ++ R P GPP +R+TG + + + TGNRL+++ ++PF
Sbjct: 169 VQWPPLLQAIAERADPALGPPEVRVTGAGADR------DTLLRTGNRLRAFARSIHLPFH 222
Query: 486 Y 486
+
Sbjct: 223 F 223
Score = 80 (33.2 bits), Expect = 8.9e-18, Sum P(2) = 8.9e-18
Identities = 29/97 (29%), Positives = 43/97 (44%)
Query: 506 DEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFI------HGISNGTYNAPF 559
DE VNCV + NL + A L +K ++P V G G +
Sbjct: 263 DETLAVNCVMFLHNLAGHDELA-----AFLKWVKAMSPAVVTIAEREAGGGGGGGDHIDD 317
Query: 560 FLARFREALFHFSAMFDIFDATVPREDAERMLFEREI 596
R A+ H+SA+F+ +ATVP ER+ E+E+
Sbjct: 318 LPRRVGVAMDHYSAVFEALEATVPPGSRERLAVEQEV 354
>TAIR|locus:2083073 [details] [associations]
symbol:AT3G49950 "AT3G49950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132978
InterPro:IPR005202 PROSITE:PS50985 eggNOG:NOG309215 EMBL:BT012553
EMBL:AK226623 IPI:IPI00534186 PIR:T45848 RefSeq:NP_190564.1
UniGene:At.50260 EnsemblPlants:AT3G49950.1 GeneID:824157
KEGG:ath:AT3G49950 GeneFarm:4259 TAIR:At3g49950
HOGENOM:HOG000241523 InParanoid:Q9SN22 OMA:MSMDFRV PhylomeDB:Q9SN22
ProtClustDB:CLSN2684384 Genevestigator:Q9SN22 Uniprot:Q9SN22
Length = 410
Score = 223 (83.6 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 77/298 (25%), Positives = 137/298 (45%)
Query: 314 LLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHTH 373
LL CA A+ SND ++ L + + GD TQRL F AL +R + + +
Sbjct: 30 LLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVSKTPTLSST 89
Query: 374 ISCRTSAADILKAYQMSLSAW----PFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGF 429
IS A ++ + + L+A+ P+ R ++ AN I E + +HI+D + +
Sbjct: 90 ISFLPQADELHRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLSLTHCM 149
Query: 430 QWPCLIQILSSRPTGPP-MLRITGIELPQPGFRPAERV--EETGNRLKSYCERFNVPFEY 486
Q P LI ++SR PP +L++T + F P + EE G++L ++ N+ E+
Sbjct: 150 QIPTLIDAMASRLNKPPPLLKLTVVS-SSDHFPPFINISYEELGSKLVNFATTRNITMEF 208
Query: 487 NVIAQKWE---TIRLEDFKI---DRDEVTVVNCVHRMKNLPDDTVVDSSP--RDAVLDLI 538
++ + + L+ +I +E VVNC ++ +P++ + SS R L +
Sbjct: 209 TIVPSTYSDGFSSLLQQLRIYPSSFNEALVVNCHMMLRYIPEEPLTSSSSSLRTVFLKQL 268
Query: 539 KRINPDVFIHGISNGTYNAPFFLARFREALFHFSAMFDIFDATVPREDAERMLFEREI 596
+ +NP + + + + R + A +F FD D T E +R +E EI
Sbjct: 269 RSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFWIPFDTTD-TFMSE--QRRWYEAEI 323
>TAIR|locus:2184625 [details] [associations]
symbol:SCL8 "AT5G52510" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF03514 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AP000378 EMBL:AF036305
EMBL:AY099686 EMBL:AY128868 IPI:IPI00531227 PIR:T51239
RefSeq:NP_200064.3 UniGene:At.22412 UniGene:At.71617 STRING:Q9FYR7
PRIDE:Q9FYR7 EnsemblPlants:AT5G52510.1 GeneID:835327
KEGG:ath:AT5G52510 GeneFarm:4234 TAIR:At5g52510 eggNOG:NOG240925
HOGENOM:HOG000239354 InParanoid:Q9FYR7 OMA:PGAPWRD PhylomeDB:Q9FYR7
ProtClustDB:CLSN2680518 Genevestigator:Q9FYR7 Uniprot:Q9FYR7
Length = 640
Score = 193 (73.0 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 71/295 (24%), Positives = 130/295 (44%)
Query: 319 AQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMH--THISC 376
A A+A A E L ++ + + + ++L + AL +R+ T ++ H+
Sbjct: 273 ATAIAEGKTEIATEILARVSQTPNLERNSEEKLVDFMVAALRSRIASPVTELYGKEHLI- 331
Query: 377 RTSAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEK---ATRL-HIIDFGICYGFQWP 432
+ +L Y++S P ++ + AN I A+ + H+IDF I G Q+
Sbjct: 332 ---STQLL--YELS----PCFKLGFEAANLAILDAADNNDGGMMIPHVIDFDIGEGGQYV 382
Query: 433 CLIQILSSRPTGP------PMLRITGIELPQPGFRP----AERVEETGNRLKSYCERFNV 482
L++ LS+R G P+++IT + G ER++ G+ L +R +
Sbjct: 383 NLLRTLSTRRNGKSQSQNSPVVKITAVANNVYGCLVDDGGEERLKAVGDLLSQLGDRLGI 442
Query: 483 PFEYNVIAQ-KWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRI 541
+NV+ + + E D DE VN ++ +PD++V +PRD +L +K +
Sbjct: 443 SVSFNVVTSLRLGDLNRESLGCDPDETLAVNLAFKLYRVPDESVCTENPRDELLRRVKGL 502
Query: 542 NPDVFIHGISNGTYNAPFFLARFREALFHFSAMFDIFDATVPREDAERMLFEREI 596
P V N FL R E+ + A+ + ++TVP +++R E I
Sbjct: 503 KPRVVTLVEQEMNSNTAPFLGRVSESCACYGALLESVESTVPSTNSDRAKVEEGI 557
>TAIR|locus:2087994 [details] [associations]
symbol:AT3G13840 "AT3G13840" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB028610
InterPro:IPR005202 PROSITE:PS50985 IPI:IPI00544801
RefSeq:NP_188000.1 UniGene:At.64114 PaxDb:Q9LRW3 PRIDE:Q9LRW3
EnsemblPlants:AT3G13840.1 GeneID:820596 KEGG:ath:AT3G13840
GeneFarm:4262 TAIR:At3g13840 eggNOG:NOG262645 HOGENOM:HOG000240132
InParanoid:Q9LRW3 OMA:WFAFPNN PhylomeDB:Q9LRW3
ProtClustDB:CLSN2684819 Genevestigator:Q9LRW3 Uniprot:Q9LRW3
Length = 510
Score = 163 (62.4 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 75/298 (25%), Positives = 129/298 (43%)
Query: 314 LLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHT----- 368
LL CA A+ +++ L + +S+ GD +RLA + AL+ L +
Sbjct: 148 LLNPCALAITASNSSRVQHYLCVLSELASSSGDANRRLAAFGLRALQHHLSSSSVSSSFW 207
Query: 369 PMHTHISCRTSAAD--ILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATR----LHIID 422
P+ T S +LK Y++S P+ + AN I ++ + + LHIID
Sbjct: 208 PVFTFASAEVKMFQKTLLKFYEVS----PWFALPNNMANSAILQILAQDPKDKKDLHIID 263
Query: 423 FGICYGFQWPCLIQILSSRPTGPP-MLRITGI-ELPQP-GFRPAERVEETGNRLKSYCER 479
G+ +G QWP L++ LS R GPP +RIT I +L F G++L +
Sbjct: 264 IGVSHGMQWPTLLEALSCRLEGPPPRVRITVISDLTADIPFSVGPPGYNYGSQLLGFARS 323
Query: 480 FNVPFEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIK 539
+ + +V+ + ++L D E +V R+ +L ++ D R L ++
Sbjct: 324 LKINLQISVL----DKLQLID--TSPHENLIVCAQFRLHHLKH-SINDE--RGETLKAVR 374
Query: 540 RINPDVFIHGISNGTYNAPF-FLARFREALFHFSAMFDIFDATVPREDAE-RMLFERE 595
+ P + +NG ++ F A F + L + D + E++E R L E E
Sbjct: 375 SLRPKGVVLCENNGECSSSADFAAGFSKKLEYVWKFLDSTSSGFKEENSEERKLMEGE 432
Score = 37 (18.1 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 213 SRGRKNDQREDSDYLEQGRRSKLSAVSLAVSDVK---LE-RFDEVLLRHC 258
SR R +D ++ +++ RSK A+ + K E R+ E LL C
Sbjct: 103 SRKRSHDGFLEAQQVKKSARSKRKAIKSSEKSSKDGNKEGRWAEKLLNPC 152
>TAIR|locus:2101801 [details] [associations]
symbol:HAM2 "AT3G60630" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0007020 "microtubule
nucleation" evidence=RCA] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0051301 GO:GO:0003700 GO:GO:0006351
GO:GO:0048768 GO:GO:0010492 EMBL:AL162295 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY064062 EMBL:AY096372 EMBL:EU550731
EMBL:EU550732 EMBL:EU550733 EMBL:EU550734 EMBL:EU550735
EMBL:EU550736 EMBL:EU550737 EMBL:EU550738 EMBL:EU550739
EMBL:EU550740 EMBL:EU550741 EMBL:EU550742 EMBL:EU550743
EMBL:EU550744 EMBL:EU550745 EMBL:EU550746 EMBL:EU550747
EMBL:EU550748 EMBL:EU550749 EMBL:EU550750 EMBL:EU550752
EMBL:EU550754 EMBL:EU550751 EMBL:EU550753 IPI:IPI00520916
PIR:T47874 RefSeq:NP_191622.1 UniGene:At.27084 IntAct:Q9M000
EnsemblPlants:AT3G60630.1 GeneID:825234 KEGG:ath:AT3G60630
GeneFarm:4227 TAIR:At3g60630 eggNOG:NOG261649 HOGENOM:HOG000239326
InParanoid:Q9M000 OMA:ANQTILE PhylomeDB:Q9M000
ProtClustDB:CLSN2683334 Genevestigator:Q9M000 Uniprot:Q9M000
Length = 623
Score = 149 (57.5 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 67/240 (27%), Positives = 106/240 (44%)
Query: 350 RLAHYFADALEARLLGAHTPMHTHISCRTSAADILKAYQMSLSAWPFIRMSYLFANQTIR 409
R A Y +AL + LL + +S + + AY+ PF++ ANQTI
Sbjct: 294 RAASYITEALHS-LLQDSSLSPPSLSPPQNLIFRIAAYRAFSETSPFLQFVNFTANQTIL 352
Query: 410 KLAEKATRLHIIDFGICYGFQWPCLIQILS---SRPTGPPMLRITGIELPQPGFRPAERV 466
+ E R+HI+DF I YG QW LIQ L+ +R + P L+IT P E +
Sbjct: 353 ESFEGFDRIHIVDFDIGYGGQWASLIQELAGKRNRSSSAPSLKITAFASPSTVSDEFE-L 411
Query: 467 EETGNRLKSYCERFNVPFEYNVIAQKW---ETI-RLEDFKIDRDEVTVVNCVHRMKNLPD 522
T L+S+ V FE ++ + T L F+ E VN LP
Sbjct: 412 RFTEENLRSFAGETGVSFEIELLNMEILLNPTYWPLSLFRSSEKEAIAVN-------LPI 464
Query: 523 DTVVDSSPRDAVLDLIKRINPDVFIHGISNGTYN--APFFLARFREALFHFSAMFDIFDA 580
++V S +L +K+I+P+V + + N APF AL +++++ + D+
Sbjct: 465 SSMV-SGYLPLILRFLKQISPNVVVCSDRSCDRNNDAPFPNGVIN-ALQYYTSLLESLDS 522
>TAIR|locus:2055622 [details] [associations]
symbol:HAM1 "AT2G45160" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] Pfam:PF03514
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051301
GO:GO:0003700 GO:GO:0006351 GO:GO:0048768 GO:GO:0010492
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000239326
ProtClustDB:CLSN2683334 EMBL:BT004053 EMBL:BT020591 IPI:IPI00534274
PIR:B84887 RefSeq:NP_182041.1 UniGene:At.27046 UniGene:At.67081
UniGene:At.74179 STRING:Q7XJM8 PaxDb:Q7XJM8 PRIDE:Q7XJM8
EnsemblPlants:AT2G45160.1 GeneID:819124 KEGG:ath:AT2G45160
GeneFarm:4226 TAIR:At2g45160 eggNOG:NOG320780 InParanoid:Q7XJM8
OMA:HRWIERS PhylomeDB:Q7XJM8 Genevestigator:Q7XJM8 Uniprot:Q7XJM8
Length = 640
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 71/281 (25%), Positives = 121/281 (43%)
Query: 316 TLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHTHIS 375
T+ AQ + + N L H S F QR A + A+AL + + +P I+
Sbjct: 290 TVLAQGILAR----LNHHLNTSSNHKSPF----QRAASHIAEALLSLIHNESSP--PLIT 339
Query: 376 CRTSAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKA--TRLHIIDFGICYGFQWPC 433
I AY+ PF++ ANQ+I + ++ R+HIIDF + YG QW
Sbjct: 340 PENLILRIA-AYRSFSETSPFLQFVNFTANQSILESCNESGFDRIHIIDFDVGYGGQWSS 398
Query: 434 LIQILSSRPTGPPMLRITGIEL----PQPGFRPAE-RVEETGNRLKSYCERFNVPFEYNV 488
L+Q L+S G R + ++L P P E + T LK++ +PFE +
Sbjct: 399 LMQELASGVGGRRRNRASSLKLTVFAPPPSTVSDEFELRFTEENLKTFAGEVKIPFEIEL 458
Query: 489 IAQKWETIRLEDFKID-RDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFI 547
++ + + + + R V NLP ++V S +L +K+++P++ +
Sbjct: 459 LSVEL-LLNPAYWPLSLRSSEKEAIAV----NLPVNSVA-SGYLPLILRFLKQLSPNIVV 512
Query: 548 HGISNGTYN-APFFLARFREALFHFSAMFDIFDATVPREDA 587
N APF A +H S + + DA ++D+
Sbjct: 513 CSDRGCDRNDAPFPNAVIHSLQYHTS-LLESLDANQNQDDS 552
>TAIR|locus:1009023400 [details] [associations]
symbol:AT5G67411 "AT5G67411" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 EMBL:AB007645
InterPro:IPR005202 PROSITE:PS50985 EMBL:DQ487622 IPI:IPI00657013
RefSeq:NP_001032167.1 UniGene:At.65711 EnsemblPlants:AT5G67411.1
GeneID:3771574 KEGG:ath:AT5G67411 TAIR:At5g67411 eggNOG:NOG309215
PhylomeDB:Q2V2T9 Genevestigator:Q2V2T9 Uniprot:Q2V2T9
Length = 202
Score = 131 (51.2 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 43/179 (24%), Positives = 83/179 (46%)
Query: 430 QWPCLIQILSSR--PTGPPMLRITGIELPQPGFRPAERV----EETGNRLKSYCERFNVP 483
Q P LI ++++ PP+L++T I F P + EE G++L ++ NV
Sbjct: 2 QIPTLIDSMANKLHKKPPPLLKLTVIA-SDAEFHPPPLLGISYEELGSKLVNFATTRNVA 60
Query: 484 FEYNVIAQKWE---TIRLEDFKIDR---DEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDL 537
E+ +I+ + + +E +ID +E VVNC H M + D ++ S+ R L
Sbjct: 61 MEFRIISSSYSDGLSSLIEQLRIDPFVFNEALVVNC-HMMLHYIPDEILTSNLRSVFLKE 119
Query: 538 IKRINPDVFIHGISNGTYNAPFFLARFREALFHFSAMFDIFDATVPREDAERMLFEREI 596
++ +NP + + + + F++R R + +D + + R +R +E +I
Sbjct: 120 LRDLNPTIVTLIDEDSDFTSTNFISRLRSLYNYMWIPYDTAEMFLTRGSEQRQWYEADI 178
>TAIR|locus:2126901 [details] [associations]
symbol:HAM3 "AT4G00150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010492 "maintenance of shoot apical meristem identity"
evidence=IGI] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048768 "root hair cell tip growth" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0048768 GO:GO:0010492 EMBL:AL161471
EMBL:AF069299 InterPro:IPR005202 PROSITE:PS50985
HOGENOM:HOG000239326 eggNOG:NOG320780 EMBL:AF462831 EMBL:AY133537
EMBL:AF036303 EMBL:EU550755 EMBL:EU550756 EMBL:EU550757
EMBL:EU550758 EMBL:EU550759 EMBL:EU550760 EMBL:EU550761
EMBL:EU550762 EMBL:EU550763 EMBL:EU550764 EMBL:EU550765
EMBL:EU550766 EMBL:EU550767 EMBL:EU550768 EMBL:EU550769
EMBL:EU550770 EMBL:EU550771 EMBL:EU550772 EMBL:EU550773
EMBL:EU550774 EMBL:EU550775 EMBL:EU550776 EMBL:EU550777
IPI:IPI00542979 PIR:T01343 PIR:T51237 RefSeq:NP_191926.1
UniGene:At.3732 UniGene:At.67226 IntAct:O81316
EnsemblPlants:AT4G00150.1 GeneID:828208 KEGG:ath:AT4G00150
GeneFarm:4228 TAIR:At4g00150 InParanoid:O81316 OMA:KTPPWRA
PhylomeDB:O81316 ProtClustDB:CLSN2916162 Genevestigator:O81316
Uniprot:O81316
Length = 558
Score = 141 (54.7 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 70/286 (24%), Positives = 114/286 (39%)
Query: 319 AQAVASNDQRTANEQLKQIRRH-SSAFGDGTQRLAHYFADALEARLLGAHTPMHTHISCR 377
A V +D A L ++ + SS G +R A YF +AL L ++ +
Sbjct: 212 AAEVIESDTCLAQGILARLNQQLSSPVGKPLERAAFYFKEALNNLLHNVSQTLNPY---- 267
Query: 378 TSAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWPCLIQI 437
S + AY+ P ++ + +NQ + + RLHIIDF I YG QW L+Q
Sbjct: 268 -SLIFKIAAYKSFSEISPVLQFANFTSNQALLESFHGFHRLHIIDFDIGYGGQWASLMQE 326
Query: 438 LSSRPTGPPM-LRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIA-QKWET 495
L R P+ L+IT P + T + LK + N+ + V++ +
Sbjct: 327 LVLRDNAAPLSLKIT--VFASPANHDQLELGFTQDNLKHFASEINISLDIQVLSLDLLGS 384
Query: 496 IRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGISNGTY 555
I + +++ V V +LP VL +K ++P + + G
Sbjct: 385 ISWPNSS-EKEAVAVNISAASFSHLP-----------LVLRFVKHLSPTIIVCS-DRGCE 431
Query: 556 NAPF-FLARFREALFHFSAMFDIFDATVPREDA----ERMLFEREI 596
F + +L +A+F+ DA DA ER L + EI
Sbjct: 432 RTDLPFSQQLAHSLHSHTALFESLDAVNANLDAMQKIERFLIQPEI 477
>TAIR|locus:2115340 [details] [associations]
symbol:HAM4 "AT4G36710" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048831 "regulation of shoot system development" evidence=IGI]
Pfam:PF03514 GO:GO:0005634 GO:GO:0030154 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0048831
EMBL:AL161589 EMBL:Z99708 InterPro:IPR005202 PROSITE:PS50985
EMBL:AK118497 IPI:IPI00538111 PIR:E85433 RefSeq:NP_195389.4
UniGene:At.31304 PaxDb:O23210 PRIDE:O23210 DNASU:829824
EnsemblPlants:AT4G36710.1 GeneID:829824 KEGG:ath:AT4G36710
GeneFarm:4264 TAIR:At4g36710 eggNOG:NOG271584 HOGENOM:HOG000090733
InParanoid:O23210 OMA:ELVLCWH ProtClustDB:CLSN2717261
Genevestigator:O23210 Uniprot:O23210
Length = 486
Score = 127 (49.8 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 66/282 (23%), Positives = 125/282 (44%)
Query: 322 VASNDQRTANEQLKQI-RRHSSAFGDGTQRLAHYFADALEARLLGAH-TPMHTHISCRTS 379
V S++ + A L ++ +R S G QR A YF +AL + L G++ P+ +S +
Sbjct: 133 VESDELQLAQVVLSRLNQRLRSPAGRPLQRAAFYFKEALGSFLTGSNRNPIR--LSSWSE 190
Query: 380 AADILKAYQMSLSAWPFIRMSYLFANQTIR-KLAEKATR--LHIIDFGICYGFQWPCLIQ 436
++A + P S+ ANQ I L+ +++ +H++DF I +G Q+ L++
Sbjct: 191 IVQRIRAIKEYSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFGGQYASLMR 250
Query: 437 ILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCE-RFNVPFEYNVIAQKWET 495
++ + LR+T + + V+E + + + RF + F V+ + +E
Sbjct: 251 EITEKSVSGGFLRVTAVVAEECAVE-TRLVKENLTQFAAEMKIRFQIEF---VLMKTFEM 306
Query: 496 IRLEDFKIDRDEVTVVNCVHRM-KNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGISNG- 553
+ + + E TVV + + L T D V +L +R++P V + S G
Sbjct: 307 LSFKAIRFVEGERTVVLISPAIFRRLSGIT-------DFVNNL-RRVSPKVVVFVDSEGW 358
Query: 554 --TYNAPFFLARFREALFHFSAMFDIFDATVPREDAERMLFE 593
+ F F AL ++ + + DA P D + + E
Sbjct: 359 TEIAGSGSFRREFVSALEFYTMVLESLDAAAPPGDLVKKIVE 400
Score = 37 (18.1 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 16 KFPASS----CSNQNLANAFKLKHNSTNHH 41
K PASS +N N N+ H S + H
Sbjct: 2 KIPASSPQDTTNNNNNTNSTDSNHLSMDEH 31
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 596 531 0.00092 119 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 620 (66 KB)
Total size of DFA: 308 KB (2159 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 40.75u 0.15s 40.90t Elapsed: 00:00:02
Total cpu time: 40.76u 0.15s 40.91t Elapsed: 00:00:02
Start: Sat May 11 00:55:08 2013 End: Sat May 11 00:55:10 2013