Query 045079
Match_columns 596
No_of_seqs 235 out of 702
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 16:55:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045079.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045079hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 96.0 0.028 9.5E-07 56.0 10.2 109 416-552 70-180 (261)
2 3htx_A HEN1; HEN1, small RNA m 95.7 0.049 1.7E-06 63.5 11.8 125 408-556 713-840 (950)
3 1vl5_A Unknown conserved prote 94.7 0.39 1.3E-05 46.2 13.3 108 408-549 29-138 (260)
4 3dlc_A Putative S-adenosyl-L-m 94.5 0.5 1.7E-05 43.3 12.8 110 406-549 34-146 (219)
5 3jwg_A HEN1, methyltransferase 94.3 0.23 8E-06 46.4 10.4 121 406-556 19-146 (219)
6 2aot_A HMT, histamine N-methyl 94.3 0.21 7.3E-06 49.4 10.5 151 382-549 14-170 (292)
7 3dtn_A Putative methyltransfer 93.5 0.35 1.2E-05 45.6 9.9 130 406-567 33-164 (234)
8 3bkx_A SAM-dependent methyltra 93.4 1.3 4.5E-05 42.6 14.1 126 407-554 34-163 (275)
9 3dh0_A SAM dependent methyltra 93.1 0.98 3.3E-05 41.9 12.1 113 406-549 27-141 (219)
10 3jwh_A HEN1; methyltransferase 92.9 0.77 2.6E-05 42.8 11.2 118 407-554 20-144 (217)
11 1xxl_A YCGJ protein; structura 92.7 2.3 7.8E-05 40.4 14.4 110 406-549 11-122 (239)
12 3ccf_A Cyclopropane-fatty-acyl 91.9 1.2 4.2E-05 43.3 11.7 124 407-569 48-172 (279)
13 3m70_A Tellurite resistance pr 91.9 1.3 4.4E-05 43.2 11.8 110 407-549 111-221 (286)
14 1kpg_A CFA synthase;, cyclopro 91.0 1.1 3.8E-05 43.6 10.3 107 408-548 56-165 (287)
15 2qe6_A Uncharacterized protein 90.7 9.7 0.00033 37.6 17.0 110 418-553 79-199 (274)
16 2o57_A Putative sarcosine dime 90.4 2.1 7.3E-05 41.8 11.7 101 415-548 81-184 (297)
17 3g5l_A Putative S-adenosylmeth 90.3 2.6 8.9E-05 40.1 11.9 111 405-550 33-144 (253)
18 3u81_A Catechol O-methyltransf 90.2 1.4 4.9E-05 41.4 10.0 155 381-562 23-181 (221)
19 3hnr_A Probable methyltransfer 90.0 1.6 5.6E-05 40.4 10.0 109 406-550 35-144 (220)
20 3kkz_A Uncharacterized protein 89.8 2.8 9.4E-05 40.4 11.8 107 408-548 37-147 (267)
21 3h2b_A SAM-dependent methyltra 89.8 1.7 5.8E-05 39.8 9.8 97 417-549 42-139 (203)
22 1nkv_A Hypothetical protein YJ 89.5 2.5 8.6E-05 40.1 11.1 109 407-549 27-138 (256)
23 2yqz_A Hypothetical protein TT 89.4 5.7 0.0002 37.5 13.6 102 415-550 38-140 (263)
24 2xvm_A Tellurite resistance pr 89.3 3.3 0.00011 37.4 11.3 110 406-548 22-133 (199)
25 2vdw_A Vaccinia virus capping 89.1 5.1 0.00018 40.3 13.6 110 417-548 49-166 (302)
26 3bus_A REBM, methyltransferase 89.1 2.6 8.9E-05 40.4 11.0 109 407-548 52-163 (273)
27 4htf_A S-adenosylmethionine-de 87.9 4.1 0.00014 39.6 11.7 102 416-550 68-172 (285)
28 3ujc_A Phosphoethanolamine N-m 87.5 2.1 7.2E-05 40.6 9.1 116 402-549 41-157 (266)
29 3hem_A Cyclopropane-fatty-acyl 87.2 4.9 0.00017 39.5 11.8 115 407-549 63-181 (302)
30 3i9f_A Putative type 11 methyl 86.9 4.3 0.00015 35.9 10.3 102 407-549 8-110 (170)
31 3ofk_A Nodulation protein S; N 86.8 5.6 0.00019 36.6 11.4 109 408-549 43-152 (216)
32 3g5t_A Trans-aconitate 3-methy 86.8 2.7 9.4E-05 41.3 9.7 111 415-549 35-147 (299)
33 3ou2_A SAM-dependent methyltra 86.7 2.7 9.3E-05 38.5 9.1 109 405-550 34-145 (218)
34 1xtp_A LMAJ004091AAA; SGPP, st 86.7 2.8 9.4E-05 39.6 9.4 114 406-551 83-197 (254)
35 2yxd_A Probable cobalt-precorr 86.6 2.9 0.0001 36.9 9.0 102 408-549 27-129 (183)
36 3i53_A O-methyltransferase; CO 86.6 0.86 2.9E-05 45.8 6.1 108 408-548 161-271 (332)
37 2p7i_A Hypothetical protein; p 86.4 2.3 7.8E-05 39.6 8.5 106 406-549 31-139 (250)
38 3mgg_A Methyltransferase; NYSG 86.4 4.2 0.00014 39.1 10.7 104 415-550 36-141 (276)
39 3thr_A Glycine N-methyltransfe 86.2 2 6.9E-05 41.8 8.3 124 406-549 47-173 (293)
40 3f4k_A Putative methyltransfer 86.0 6.6 0.00023 37.1 11.7 109 407-549 36-148 (257)
41 4e2x_A TCAB9; kijanose, tetron 86.0 1.5 5E-05 45.6 7.6 109 407-550 98-207 (416)
42 3sm3_A SAM-dependent methyltra 85.9 9.9 0.00034 35.0 12.6 118 416-564 30-155 (235)
43 3dp7_A SAM-dependent methyltra 85.6 4.1 0.00014 41.7 10.6 111 408-548 171-284 (363)
44 3mq2_A 16S rRNA methyltransfer 85.4 1 3.5E-05 42.0 5.5 115 409-550 20-139 (218)
45 3lcc_A Putative methyl chlorid 84.2 5.7 0.0002 37.3 10.2 102 418-550 68-170 (235)
46 3mcz_A O-methyltransferase; ad 84.2 3.4 0.00012 41.6 9.1 112 407-548 169-284 (352)
47 3bgv_A MRNA CAP guanine-N7 met 83.5 8.6 0.00029 38.0 11.6 113 416-549 34-153 (313)
48 3l8d_A Methyltransferase; stru 83.4 6.1 0.00021 36.9 10.0 100 416-551 53-153 (242)
49 2fk8_A Methoxy mycolic acid sy 83.2 6.7 0.00023 38.8 10.7 108 407-548 81-191 (318)
50 3uwp_A Histone-lysine N-methyl 83.1 1.8 6.3E-05 46.8 6.9 119 407-549 164-286 (438)
51 1ve3_A Hypothetical protein PH 83.1 11 0.00036 34.8 11.4 100 417-548 39-139 (227)
52 4fsd_A Arsenic methyltransfera 82.6 7.4 0.00025 40.2 11.2 112 415-548 82-200 (383)
53 1qzz_A RDMB, aclacinomycin-10- 82.5 4.2 0.00014 41.2 9.1 113 406-551 172-288 (374)
54 2r3s_A Uncharacterized protein 82.4 3.9 0.00013 40.7 8.6 114 406-551 153-272 (335)
55 3gwz_A MMCR; methyltransferase 81.7 2.9 9.9E-05 43.0 7.6 109 406-547 192-303 (369)
56 3e8s_A Putative SAM dependent 81.5 14 0.00046 33.8 11.4 44 404-456 40-83 (227)
57 2p35_A Trans-aconitate 2-methy 81.3 4.8 0.00016 38.1 8.5 107 408-551 25-132 (259)
58 3r0q_C Probable protein argini 81.2 7.9 0.00027 40.1 10.7 112 407-550 54-168 (376)
59 1x19_A CRTF-related protein; m 81.0 3.4 0.00012 42.0 7.8 113 405-550 179-295 (359)
60 1dus_A MJ0882; hypothetical pr 80.6 8 0.00027 34.3 9.3 128 405-566 41-172 (194)
61 1y8c_A S-adenosylmethionine-de 80.5 5.6 0.00019 37.0 8.5 102 416-549 37-140 (246)
62 3bkw_A MLL3908 protein, S-aden 80.3 9.9 0.00034 35.4 10.2 109 406-549 33-142 (243)
63 3e23_A Uncharacterized protein 80.3 4.4 0.00015 37.3 7.7 96 417-550 44-140 (211)
64 3fzg_A 16S rRNA methylase; met 80.2 1.9 6.7E-05 42.0 5.3 103 417-551 50-152 (200)
65 3q7e_A Protein arginine N-meth 79.5 8.7 0.0003 39.3 10.3 121 407-558 57-180 (349)
66 3vc1_A Geranyl diphosphate 2-C 79.4 12 0.00042 36.9 11.1 109 407-549 107-219 (312)
67 3lcv_B Sisomicin-gentamicin re 79.3 14 0.00049 37.7 11.5 132 408-578 126-258 (281)
68 3d2l_A SAM-dependent methyltra 78.5 16 0.00054 34.0 11.0 99 418-549 35-135 (243)
69 2ex4_A Adrenal gland protein A 78.5 10 0.00034 35.8 9.7 104 416-549 79-183 (241)
70 4dcm_A Ribosomal RNA large sub 78.5 11 0.00038 39.2 10.9 128 404-555 210-338 (375)
71 2ip2_A Probable phenazine-spec 78.3 3.9 0.00013 40.8 7.1 111 406-548 158-269 (334)
72 3g2m_A PCZA361.24; SAM-depende 78.1 3.3 0.00011 40.7 6.4 114 407-550 74-189 (299)
73 2y1w_A Histone-arginine methyl 77.6 8.2 0.00028 39.4 9.4 112 406-549 40-153 (348)
74 4a6d_A Hydroxyindole O-methylt 77.2 2.7 9.2E-05 43.1 5.6 113 405-550 168-283 (353)
75 3giw_A Protein of unknown func 77.2 21 0.00072 36.2 12.1 150 385-554 43-204 (277)
76 3hm2_A Precorrin-6Y C5,15-meth 76.1 17 0.00057 32.0 10.0 60 407-483 16-75 (178)
77 4azs_A Methyltransferase WBDD; 75.8 5.8 0.0002 43.5 8.1 113 416-555 66-179 (569)
78 2p8j_A S-adenosylmethionine-de 75.8 11 0.00036 34.4 8.8 104 416-550 23-127 (209)
79 1wy7_A Hypothetical protein PH 75.2 48 0.0016 30.1 13.3 100 416-549 49-148 (207)
80 3dli_A Methyltransferase; PSI- 75.1 3.6 0.00012 38.9 5.5 95 416-547 41-136 (240)
81 3iv6_A Putative Zn-dependent a 75.0 5.1 0.00017 40.1 6.8 42 406-456 35-76 (261)
82 3cc8_A Putative methyltransfer 74.8 6.6 0.00022 36.0 7.1 105 406-549 23-128 (230)
83 1wzn_A SAM-dependent methyltra 74.6 17 0.00057 34.2 10.1 103 415-550 40-144 (252)
84 2avn_A Ubiquinone/menaquinone 74.6 18 0.00062 34.5 10.5 32 416-456 54-85 (260)
85 3pfg_A N-methyltransferase; N, 73.8 21 0.00071 34.0 10.6 130 382-550 17-150 (263)
86 3gu3_A Methyltransferase; alph 73.3 28 0.00097 33.8 11.7 102 415-548 21-123 (284)
87 3p9n_A Possible methyltransfer 73.2 15 0.00053 33.2 9.1 110 416-555 44-157 (189)
88 1pjz_A Thiopurine S-methyltran 72.4 7.9 0.00027 36.1 7.1 103 416-546 22-135 (203)
89 3ege_A Putative methyltransfer 72.4 4.2 0.00014 39.2 5.3 108 406-553 24-133 (261)
90 4hg2_A Methyltransferase type 72.1 25 0.00085 34.5 11.0 95 419-553 42-137 (257)
91 1g6q_1 HnRNP arginine N-methyl 70.1 33 0.0011 34.6 11.6 112 406-548 28-142 (328)
92 2fyt_A Protein arginine N-meth 69.8 16 0.00053 37.3 9.2 111 406-548 54-168 (340)
93 3frh_A 16S rRNA methylase; met 69.4 4.8 0.00016 40.6 5.0 100 417-551 106-206 (253)
94 1tw3_A COMT, carminomycin 4-O- 69.2 9.8 0.00034 38.3 7.5 113 406-551 173-289 (360)
95 3ocj_A Putative exported prote 69.0 15 0.00051 36.2 8.6 106 415-549 117-225 (305)
96 2gs9_A Hypothetical protein TT 68.6 17 0.00057 33.3 8.3 96 416-551 36-133 (211)
97 1nv8_A HEMK protein; class I a 68.0 38 0.0013 33.6 11.4 114 416-553 123-251 (284)
98 2gb4_A Thiopurine S-methyltran 67.4 41 0.0014 32.7 11.3 106 415-547 67-187 (252)
99 2g72_A Phenylethanolamine N-me 67.2 15 0.00053 35.7 8.2 44 416-473 71-114 (289)
100 3q87_B N6 adenine specific DNA 66.6 46 0.0016 29.8 10.8 31 416-456 23-53 (170)
101 3g07_A 7SK snRNA methylphospha 66.0 3.8 0.00013 40.6 3.6 48 416-476 46-93 (292)
102 3e05_A Precorrin-6Y C5,15-meth 65.8 19 0.00065 32.9 8.1 53 408-473 32-84 (204)
103 3lbf_A Protein-L-isoaspartate 64.8 40 0.0014 30.7 10.2 105 408-551 69-174 (210)
104 1yzh_A TRNA (guanine-N(7)-)-me 63.1 30 0.001 31.9 9.0 110 416-551 41-156 (214)
105 3b3j_A Histone-arginine methyl 62.7 13 0.00045 40.1 7.3 112 406-549 148-261 (480)
106 1ri5_A MRNA capping enzyme; me 62.3 45 0.0015 31.9 10.4 109 415-549 63-172 (298)
107 3p9c_A Caffeic acid O-methyltr 62.0 19 0.00064 36.9 8.0 103 406-547 190-294 (364)
108 3eey_A Putative rRNA methylase 61.5 34 0.0011 30.9 8.8 110 417-550 23-138 (197)
109 3grz_A L11 mtase, ribosomal pr 61.2 16 0.00055 33.4 6.7 67 403-487 45-114 (205)
110 3njr_A Precorrin-6Y methylase; 61.1 38 0.0013 31.5 9.4 62 407-487 46-109 (204)
111 1ws6_A Methyltransferase; stru 60.6 17 0.00059 31.6 6.5 105 416-554 41-150 (171)
112 2esr_A Methyltransferase; stru 59.9 13 0.00044 33.1 5.6 108 416-556 31-143 (177)
113 3reo_A (ISO)eugenol O-methyltr 59.5 23 0.0008 36.2 8.2 103 406-547 192-296 (368)
114 1jsx_A Glucose-inhibited divis 59.2 24 0.00083 32.0 7.5 98 417-551 66-165 (207)
115 3cgg_A SAM-dependent methyltra 59.0 54 0.0018 28.8 9.6 40 407-456 38-77 (195)
116 2fca_A TRNA (guanine-N(7)-)-me 57.5 53 0.0018 30.6 9.7 54 416-486 38-92 (213)
117 2fpo_A Methylase YHHF; structu 57.4 16 0.00054 33.9 6.0 103 417-552 55-161 (202)
118 3lst_A CALO1 methyltransferase 57.0 7.2 0.00025 39.5 3.8 106 406-547 174-282 (348)
119 3ggd_A SAM-dependent methyltra 57.0 11 0.00038 35.4 4.9 106 416-551 56-164 (245)
120 2yxe_A Protein-L-isoaspartate 56.7 72 0.0025 29.1 10.3 56 407-474 68-123 (215)
121 2kw5_A SLR1183 protein; struct 56.5 75 0.0026 28.5 10.3 98 419-550 32-130 (202)
122 2j66_A BTRK, decarboxylase; bu 56.0 96 0.0033 32.3 12.3 70 416-489 133-225 (428)
123 3mti_A RRNA methylase; SAM-dep 55.9 39 0.0013 30.1 8.2 42 418-474 24-65 (185)
124 3p2e_A 16S rRNA methylase; met 55.9 23 0.00078 33.8 7.0 113 415-549 23-137 (225)
125 2zfu_A Nucleomethylin, cerebra 55.0 44 0.0015 30.5 8.6 38 408-457 58-96 (215)
126 3bxo_A N,N-dimethyltransferase 53.2 72 0.0025 29.3 9.8 100 415-550 39-140 (239)
127 1vlm_A SAM-dependent methyltra 52.7 42 0.0014 31.0 8.1 89 417-549 48-137 (219)
128 1af7_A Chemotaxis receptor met 52.7 18 0.00063 36.1 5.9 50 416-471 105-155 (274)
129 4hc4_A Protein arginine N-meth 51.5 48 0.0016 34.8 9.1 100 419-548 86-186 (376)
130 1fp1_D Isoliquiritigenin 2'-O- 51.3 15 0.00051 37.5 5.1 104 406-548 198-303 (372)
131 1dl5_A Protein-L-isoaspartate 51.0 94 0.0032 30.8 10.9 66 406-487 65-131 (317)
132 3tfw_A Putative O-methyltransf 49.7 41 0.0014 32.2 7.7 56 416-487 63-120 (248)
133 2gpy_A O-methyltransferase; st 49.6 47 0.0016 31.0 7.9 33 416-455 54-86 (233)
134 1xj5_A Spermidine synthase 1; 49.5 57 0.002 33.4 9.2 135 417-576 121-257 (334)
135 1zq9_A Probable dimethyladenos 49.2 51 0.0018 32.5 8.5 41 407-456 19-59 (285)
136 1fp2_A Isoflavone O-methyltran 49.0 13 0.00046 37.5 4.3 33 416-455 188-220 (352)
137 2h1r_A Dimethyladenosine trans 48.6 52 0.0018 32.8 8.5 41 406-455 32-72 (299)
138 1l3i_A Precorrin-6Y methyltran 48.1 39 0.0013 29.7 6.7 39 408-455 25-63 (192)
139 3dxy_A TRNA (guanine-N(7)-)-me 47.7 77 0.0026 29.9 9.2 113 416-551 34-150 (218)
140 2pjd_A Ribosomal RNA small sub 47.0 22 0.00076 36.0 5.5 120 405-553 185-305 (343)
141 3ftd_A Dimethyladenosine trans 47.0 36 0.0012 33.3 6.9 42 407-456 22-63 (249)
142 1zg3_A Isoflavanone 4'-O-methy 47.0 15 0.0005 37.3 4.2 43 407-456 182-226 (358)
143 2pxx_A Uncharacterized protein 46.9 82 0.0028 28.2 8.9 34 415-456 41-74 (215)
144 2jjq_A Uncharacterized RNA met 46.8 1.7E+02 0.006 30.8 12.6 95 417-549 291-385 (425)
145 1zx0_A Guanidinoacetate N-meth 46.5 83 0.0028 29.4 9.2 106 415-548 59-167 (236)
146 1uwv_A 23S rRNA (uracil-5-)-me 46.2 1E+02 0.0034 32.4 10.6 107 409-549 279-387 (433)
147 3fut_A Dimethyladenosine trans 45.8 37 0.0013 33.9 6.8 99 393-517 19-122 (271)
148 3g89_A Ribosomal RNA small sub 45.7 19 0.00065 35.0 4.6 103 415-550 79-183 (249)
149 3orh_A Guanidinoacetate N-meth 45.1 19 0.00065 34.4 4.4 105 415-548 59-167 (236)
150 1xdz_A Methyltransferase GIDB; 44.8 58 0.002 30.7 7.8 101 416-550 70-173 (240)
151 3lpm_A Putative methyltransfer 43.8 1.2E+02 0.004 28.9 9.9 115 416-551 49-176 (259)
152 3dmg_A Probable ribosomal RNA 43.8 1.9E+02 0.0066 29.9 12.2 111 416-555 233-344 (381)
153 2kl8_A OR15; structural genomi 39.8 41 0.0014 27.4 4.8 36 444-487 40-75 (85)
154 2ift_A Putative methylase HI07 38.5 76 0.0026 29.2 7.4 106 417-554 54-166 (201)
155 3mb5_A SAM-dependent methyltra 37.7 1.6E+02 0.0054 27.5 9.7 56 407-474 84-139 (255)
156 4dzr_A Protein-(glutamine-N5) 37.3 32 0.0011 30.9 4.5 42 408-456 21-63 (215)
157 2o07_A Spermidine synthase; st 36.8 2.3E+02 0.008 28.2 11.2 133 417-576 96-231 (304)
158 3tr6_A O-methyltransferase; ce 36.7 64 0.0022 29.6 6.6 56 416-487 64-121 (225)
159 1u2z_A Histone-lysine N-methyl 35.6 96 0.0033 33.2 8.5 118 407-550 233-358 (433)
160 1vbf_A 231AA long hypothetical 35.3 1.5E+02 0.0051 27.2 8.9 41 407-456 61-101 (231)
161 1i1n_A Protein-L-isoaspartate 35.2 1.8E+02 0.0063 26.5 9.5 57 407-475 66-124 (226)
162 1o9g_A RRNA methyltransferase; 33.9 59 0.002 30.8 5.9 55 409-474 44-98 (250)
163 1iy9_A Spermidine synthase; ro 33.6 2.6E+02 0.0089 27.2 10.8 136 416-578 75-213 (275)
164 2efj_A 3,7-dimethylxanthine me 32.9 4.3E+02 0.015 27.7 12.9 99 417-523 53-165 (384)
165 4hhu_A OR280; engineered prote 32.5 58 0.002 29.5 5.1 43 444-494 122-164 (170)
166 3tqs_A Ribosomal RNA small sub 31.5 75 0.0026 31.2 6.4 41 407-456 20-60 (255)
167 3dr5_A Putative O-methyltransf 31.5 59 0.002 30.8 5.5 53 415-483 55-107 (221)
168 1o54_A SAM-dependent O-methylt 31.2 1.8E+02 0.0061 27.9 9.0 55 407-473 103-157 (277)
169 2uyo_A Hypothetical protein ML 31.0 3.1E+02 0.011 27.6 11.0 124 404-552 91-219 (310)
170 3bzb_A Uncharacterized protein 30.3 2.6E+02 0.0089 27.1 10.1 31 417-455 80-110 (281)
171 3gru_A Dimethyladenosine trans 29.6 1.4E+02 0.0049 30.0 8.2 99 394-517 23-126 (295)
172 2ph5_A Homospermidine synthase 29.4 23 0.00078 38.8 2.4 79 398-485 89-183 (480)
173 2qm3_A Predicted methyltransfe 29.3 2.3E+02 0.0077 28.9 9.8 97 417-545 173-271 (373)
174 3m33_A Uncharacterized protein 28.9 2.1E+02 0.0071 26.4 8.8 32 416-456 48-79 (226)
175 2qgh_A Diaminopimelate decarbo 28.4 3.2E+02 0.011 28.4 10.9 71 416-490 150-243 (425)
176 1k87_A PUTA, proline dehydroge 28.1 83 0.0029 35.8 6.7 89 400-488 257-371 (669)
177 1sui_A Caffeoyl-COA O-methyltr 28.0 1.4E+02 0.0048 28.6 7.5 34 417-456 80-113 (247)
178 2pt6_A Spermidine synthase; tr 27.7 2.6E+02 0.0088 28.1 9.8 135 417-578 117-254 (321)
179 2nxc_A L11 mtase, ribosomal pr 27.0 1E+02 0.0036 29.5 6.4 52 416-486 120-171 (254)
180 3duw_A OMT, O-methyltransferas 27.0 1.2E+02 0.004 27.9 6.5 56 416-487 58-115 (223)
181 2pbf_A Protein-L-isoaspartate 26.9 1.2E+02 0.0042 27.8 6.7 61 407-475 69-131 (227)
182 3bwc_A Spermidine synthase; SA 26.4 4.4E+02 0.015 25.9 11.2 114 416-551 95-210 (304)
183 3id6_C Fibrillarin-like rRNA/T 26.3 2.4E+02 0.0083 27.2 9.0 43 407-455 64-109 (232)
184 3ckk_A TRNA (guanine-N(7)-)-me 26.1 86 0.0029 30.0 5.6 50 414-476 44-93 (235)
185 3gdh_A Trimethylguanosine synt 25.9 1.8E+02 0.0062 26.8 7.8 54 416-488 78-133 (241)
186 2ozv_A Hypothetical protein AT 25.8 1.4E+02 0.0048 28.7 7.1 121 415-551 35-170 (260)
187 3uzu_A Ribosomal RNA small sub 25.8 1.6E+02 0.0055 29.2 7.7 45 407-456 33-77 (279)
188 1r18_A Protein-L-isoaspartate( 25.3 1.4E+02 0.0047 27.6 6.8 54 416-476 84-137 (227)
189 2qn6_B Translation initiation 25.2 42 0.0014 28.7 2.8 43 443-487 49-91 (93)
190 2vdv_E TRNA (guanine-N(7)-)-me 25.2 3E+02 0.01 25.8 9.2 48 416-476 49-96 (246)
191 3c0k_A UPF0064 protein YCCW; P 24.9 2.8E+02 0.0097 28.3 9.7 112 418-553 222-341 (396)
192 3c3y_A Pfomt, O-methyltransfer 24.8 2.3E+02 0.008 26.6 8.4 34 416-455 70-103 (237)
193 1ej0_A FTSJ; methyltransferase 24.8 3.1E+02 0.011 23.0 10.4 36 416-457 22-57 (180)
194 2frn_A Hypothetical protein PH 24.6 2.6E+02 0.0089 27.1 8.9 115 418-569 127-245 (278)
195 1jg1_A PIMT;, protein-L-isoasp 24.6 2.4E+02 0.0082 26.1 8.4 53 407-473 82-134 (235)
196 2ipx_A RRNA 2'-O-methyltransfe 24.0 1.7E+02 0.0057 27.2 7.1 33 417-455 78-110 (233)
197 1mjf_A Spermidine synthase; sp 23.7 1.6E+02 0.0055 28.8 7.2 43 417-473 76-118 (281)
198 1p91_A Ribosomal RNA large sub 23.1 2.2E+02 0.0075 26.8 7.9 35 415-456 84-118 (269)
199 2i62_A Nicotinamide N-methyltr 23.0 1.4E+02 0.0047 27.8 6.3 45 415-473 55-99 (265)
200 2i7c_A Spermidine synthase; tr 22.4 2.2E+02 0.0076 27.8 7.9 111 417-551 79-192 (283)
201 2fhp_A Methylase, putative; al 22.3 2.3E+02 0.0079 24.6 7.4 107 416-554 44-157 (187)
202 3a27_A TYW2, uncharacterized p 21.6 2.1E+02 0.007 27.8 7.5 97 418-550 121-218 (272)
203 1inl_A Spermidine synthase; be 21.6 5.8E+02 0.02 25.0 12.6 135 417-578 91-229 (296)
204 2h00_A Methyltransferase 10 do 21.4 1.1E+02 0.0037 28.9 5.2 56 416-488 65-122 (254)
205 2pwy_A TRNA (adenine-N(1)-)-me 21.3 1.6E+02 0.0054 27.4 6.4 57 407-475 87-143 (258)
206 1m6e_X S-adenosyl-L-methionnin 21.1 66 0.0022 33.7 3.9 46 415-460 50-104 (359)
207 3ntv_A MW1564 protein; rossman 20.9 95 0.0032 29.1 4.7 56 415-487 70-127 (232)
208 3opn_A Putative hemolysin; str 20.7 99 0.0034 29.6 4.8 34 416-457 37-70 (232)
209 1ne2_A Hypothetical protein TA 20.2 2.2E+02 0.0076 25.5 6.9 32 416-455 51-82 (200)
210 1qam_A ERMC' methyltransferase 20.1 2.1E+02 0.0071 27.3 7.0 41 407-456 21-61 (244)
211 1m6y_A S-adenosyl-methyltransf 20.1 77 0.0026 32.0 4.1 55 409-476 19-73 (301)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=96.00 E-value=0.028 Score=55.96 Aligned_cols=109 Identities=17% Similarity=0.216 Sum_probs=65.3
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeecccccc
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWET 495 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E~ 495 (596)
..-+|+|+|.+.|. +...|+++- ++|..+|||||.. ...|+.+.+++.++. ...+++|.. ...++
T Consensus 70 ~~~~vLDlGcGtG~----~~~~la~~~-~~~~~~v~gvD~s------~~ml~~A~~~~~~~~--~~~~v~~~~--~D~~~ 134 (261)
T 4gek_A 70 PGTQVYDLGCSLGA----ATLSVRRNI-HHDNCKIIAIDNS------PAMIERCRRHIDAYK--APTPVDVIE--GDIRD 134 (261)
T ss_dssp TTCEEEEETCTTTH----HHHHHHHTC-CSSSCEEEEEESC------HHHHHHHHHHHHTSC--CSSCEEEEE--SCTTT
T ss_pred CCCEEEEEeCCCCH----HHHHHHHhc-CCCCCEEEEEECC------HHHHHHHHHHHHhhc--cCceEEEee--ccccc
Confidence 44589999999984 444555443 4467899999973 355776666655432 223455532 23333
Q ss_pred cCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEE-Eeeeec
Q 045079 496 IRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVF-IHGISN 552 (596)
Q Consensus 496 i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vf-v~~e~n 552 (596)
+. ..+ +=+|-|.+.|||+.++ -|..+|+.| |.|+|.-. ++.+..
T Consensus 135 ~~-----~~~--~d~v~~~~~l~~~~~~------~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 135 IA-----IEN--ASMVVLNFTLQFLEPS------ERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp CC-----CCS--EEEEEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred cc-----ccc--cccceeeeeeeecCch------hHhHHHHHHHHHcCCCcEEEEEecc
Confidence 33 222 2234456788888754 256788887 55799874 444443
No 2
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=95.71 E-value=0.049 Score=63.52 Aligned_cols=125 Identities=16% Similarity=0.272 Sum_probs=79.6
Q ss_pred HHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHH--HhhcCCcEE
Q 045079 408 IRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSY--CERFNVPFE 485 (596)
Q Consensus 408 IleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~--A~~~gVPFe 485 (596)
|++.+.....-.|+|+|.+.| .+...|+.+ ++|.-+|||||.. ...++.+.++|... +++.|++ .
T Consensus 713 LLelL~~~~g~rVLDVGCGTG----~lai~LAr~--g~p~a~VtGVDIS------~emLe~AReRLa~~lnAkr~gl~-n 779 (950)
T 3htx_A 713 ALKHIRESSASTLVDFGCGSG----SLLDSLLDY--PTSLQTIIGVDIS------PKGLARAAKMLHVKLNKEACNVK-S 779 (950)
T ss_dssp HHHHHHHSCCSEEEEETCSSS----HHHHHHTSS--CCCCCEEEEEESC------HHHHHHHHHHHHHHTTTTCSSCS-E
T ss_pred HHHHhcccCCCEEEEECCCCC----HHHHHHHHh--CCCCCeEEEEECC------HHHHHHHHHHhhhccchhhcCCC-c
Confidence 455555556678999999998 445566654 4566799999973 45677787777765 3345555 2
Q ss_pred EEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHH-HHhhCCcEEEeeeecCCCC
Q 045079 486 YNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDL-IKRINPDVFIHGISNGTYN 556 (596)
Q Consensus 486 F~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~-Ir~L~P~Vfv~~e~n~~~n 556 (596)
...+...++++.. ..+.+=+|-|...|+|+.+.. +..+|+. .|-|+|.++++...|..+|
T Consensus 780 VefiqGDa~dLp~-----~d~sFDlVV~~eVLeHL~dp~------l~~~L~eI~RvLKPG~LIISTPN~eyN 840 (950)
T 3htx_A 780 ATLYDGSILEFDS-----RLHDVDIGTCLEVIEHMEEDQ------ACEFGEKVLSLFHPKLLIVSTPNYEFN 840 (950)
T ss_dssp EEEEESCTTSCCT-----TSCSCCEEEEESCGGGSCHHH------HHHHHHHHHHTTCCSEEEEEECBGGGH
T ss_pred eEEEECchHhCCc-----ccCCeeEEEEeCchhhCChHH------HHHHHHHHHHHcCCCEEEEEecCchhh
Confidence 2333334444332 223344555677889988641 3356665 5778999888887776554
No 3
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=94.74 E-value=0.39 Score=46.20 Aligned_cols=108 Identities=11% Similarity=0.200 Sum_probs=63.5
Q ss_pred HHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc-EEE
Q 045079 408 IRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP-FEY 486 (596)
Q Consensus 408 IleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP-FeF 486 (596)
|++.+.-...-+|+|+|.+.|. +...|+.+. + ++||||.. ...++.+.+++ +..|++ ++|
T Consensus 29 l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~gvD~s------~~~l~~a~~~~----~~~~~~~v~~ 89 (260)
T 1vl5_A 29 LMQIAALKGNEEVLDVATGGGH----VANAFAPFV--K---KVVAFDLT------EDILKVARAFI----EGNGHQQVEY 89 (260)
T ss_dssp HHHHHTCCSCCEEEEETCTTCH----HHHHHGGGS--S---EEEEEESC------HHHHHHHHHHH----HHTTCCSEEE
T ss_pred HHHHhCCCCCCEEEEEeCCCCH----HHHHHHHhC--C---EEEEEeCC------HHHHHHHHHHH----HhcCCCceEE
Confidence 3444544556689999999885 445666553 2 99999973 34455444433 344554 444
Q ss_pred EeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEee
Q 045079 487 NVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHG 549 (596)
Q Consensus 487 ~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~ 549 (596)
.. ..+++ +...++.+=+|-|.+.|||+.| + ..+|+.+ |-|+|.-.++.
T Consensus 90 ~~--~d~~~-----l~~~~~~fD~V~~~~~l~~~~d-------~-~~~l~~~~r~LkpgG~l~~ 138 (260)
T 1vl5_A 90 VQ--GDAEQ-----MPFTDERFHIVTCRIAAHHFPN-------P-ASFVSEAYRVLKKGGQLLL 138 (260)
T ss_dssp EE--CCC-C-----CCSCTTCEEEEEEESCGGGCSC-------H-HHHHHHHHHHEEEEEEEEE
T ss_pred EE--ecHHh-----CCCCCCCEEEEEEhhhhHhcCC-------H-HHHHHHHHHHcCCCCEEEE
Confidence 32 22333 2233344556667788899875 2 3566655 66799865554
No 4
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=94.46 E-value=0.5 Score=43.35 Aligned_cols=110 Identities=13% Similarity=0.068 Sum_probs=64.7
Q ss_pred HHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--
Q 045079 406 QTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP-- 483 (596)
Q Consensus 406 qaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP-- 483 (596)
..|++.+..... +|+|+|.+.|. +...|+.+ |..++||||.. ...++.+.+++ +..|+.
T Consensus 34 ~~~~~~~~~~~~-~vLdiG~G~G~----~~~~l~~~----~~~~v~~~D~s------~~~~~~a~~~~----~~~~~~~~ 94 (219)
T 3dlc_A 34 ENIINRFGITAG-TCIDIGSGPGA----LSIALAKQ----SDFSIRALDFS------KHMNEIALKNI----ADANLNDR 94 (219)
T ss_dssp HHHHHHHCCCEE-EEEEETCTTSH----HHHHHHHH----SEEEEEEEESC------HHHHHHHHHHH----HHTTCTTT
T ss_pred HHHHHhcCCCCC-EEEEECCCCCH----HHHHHHHc----CCCeEEEEECC------HHHHHHHHHHH----HhccccCc
Confidence 455555554445 99999999985 44455554 45899999973 34455544443 344543
Q ss_pred EEEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEee
Q 045079 484 FEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHG 549 (596)
Q Consensus 484 FeF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~ 549 (596)
++|.. ..++++ .+..+.+=+|-|...|||+.+ ...+|+.+ +-|+|.-.++.
T Consensus 95 ~~~~~--~d~~~~-----~~~~~~~D~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~ 146 (219)
T 3dlc_A 95 IQIVQ--GDVHNI-----PIEDNYADLIVSRGSVFFWED--------VATAFREIYRILKSGGKTYI 146 (219)
T ss_dssp EEEEE--CBTTBC-----SSCTTCEEEEEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEE
T ss_pred eEEEE--cCHHHC-----CCCcccccEEEECchHhhccC--------HHHHHHHHHHhCCCCCEEEE
Confidence 44432 233332 233344445666677888743 24566665 56799876554
No 5
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=94.35 E-value=0.23 Score=46.39 Aligned_cols=121 Identities=17% Similarity=0.242 Sum_probs=70.2
Q ss_pred HHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCC---
Q 045079 406 QTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNV--- 482 (596)
Q Consensus 406 qaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gV--- 482 (596)
+.|++.+...+.-.|+|+|.+.|. +...|+.+. |..++||||.. ...++.+.+++. ..++
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~s------~~~~~~a~~~~~----~~~~~~~ 81 (219)
T 3jwg_A 19 GTVVAVLKSVNAKKVIDLGCGEGN----LLSLLLKDK---SFEQITGVDVS------YSVLERAKDRLK----IDRLPEM 81 (219)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCH----HHHHHHTST---TCCEEEEEESC------HHHHHHHHHHHT----GGGSCHH
T ss_pred HHHHHHHhhcCCCEEEEecCCCCH----HHHHHHhcC---CCCEEEEEECC------HHHHHHHHHHHH----hhccccc
Confidence 345555655566789999999985 455566543 34799999973 344555544432 2222
Q ss_pred ---cEEEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeeeecCCCC
Q 045079 483 ---PFEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGISNGTYN 556 (596)
Q Consensus 483 ---PFeF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e~n~~~n 556 (596)
.++|.. ..++.+. ...+.+=+|-|...|+|+.++. +..+|+.+ +.|+|..+++...+..++
T Consensus 82 ~~~~v~~~~--~d~~~~~-----~~~~~fD~V~~~~~l~~~~~~~------~~~~l~~~~~~LkpgG~~i~~~~~~~~ 146 (219)
T 3jwg_A 82 QRKRISLFQ--SSLVYRD-----KRFSGYDAATVIEVIEHLDENR------LQAFEKVLFEFTRPQTVIVSTPNKEYN 146 (219)
T ss_dssp HHTTEEEEE--CCSSSCC-----GGGTTCSEEEEESCGGGCCHHH------HHHHHHHHHTTTCCSEEEEEEEBGGGG
T ss_pred cCcceEEEe--Ccccccc-----cccCCCCEEEEHHHHHhCCHHH------HHHHHHHHHHhhCCCEEEEEccchhhh
Confidence 234432 2222221 1112222344677888886431 34677766 556999988877776653
No 6
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=94.31 E-value=0.21 Score=49.40 Aligned_cols=151 Identities=11% Similarity=0.097 Sum_probs=77.6
Q ss_pred HHHHHHHHHhhcccchhhhHHHHhHHHHHhhh----hcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 045079 382 DILKAYQMSLSAWPFIRMSYLFANQTIRKLAE----KATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQ 457 (596)
Q Consensus 382 d~lkAy~lf~~~~Pf~kfa~~~ANqaIleA~~----g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq 457 (596)
...+.|+.|...+.-.+...-.-.+.+-+.++ .....+|+|+|.+-|.---.++..|+.+..+ -.+.+||||+.
T Consensus 14 ~y~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~-~~v~~~~vD~S- 91 (292)
T 2aot_A 14 KYVESFRRFLNHSTEHQCMQEFMDKKLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPG-VCINNEVVEPS- 91 (292)
T ss_dssp HHHHHHHHHHTTBSHHHHHHHHHHHTHHHHSSSTTTTCSEEEEEEETCTTSHHHHHHHHHHHHHSTT-CEEEEEEECSC-
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHhchhHHhhccCCCCCCeEEEEcCCCCHHHHHHHHHHHhhCCC-ceeeEEEEeCC-
Confidence 45566666665543222222122222222222 2457899999999995444567777654311 13345999963
Q ss_pred CCCCChHHHHHHHHHHHHHHhhcCCcEEEEeecccccccCccc-ccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHH
Q 045079 458 PGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETIRLED-FKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLD 536 (596)
Q Consensus 458 ~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E~i~~ed-L~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~ 536 (596)
.+.++.+.+++.+...--+|.|+|... ..+++...- ....++.+=+|-|.+.|||+.|- ..+|+
T Consensus 92 -----~~ml~~a~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~--------~~~l~ 156 (292)
T 2aot_A 92 -----AEQIAKYKELVAKTSNLENVKFAWHKE--TSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDI--------PATLK 156 (292)
T ss_dssp -----HHHHHHHHHHHHTCSSCTTEEEEEECS--CHHHHHHHHHTTTCCCCEEEEEEESCGGGCSCH--------HHHHH
T ss_pred -----HHHHHHHHHHHHhccCCCcceEEEEec--chhhhhhhhccccCCCceeEEEEeeeeeecCCH--------HHHHH
Confidence 345655554442211111344554332 222221000 00123445577788999999862 46777
Q ss_pred HHHh-hCCcEEEee
Q 045079 537 LIKR-INPDVFIHG 549 (596)
Q Consensus 537 ~Ir~-L~P~Vfv~~ 549 (596)
.|++ |+|.-.++.
T Consensus 157 ~~~r~LkpgG~l~i 170 (292)
T 2aot_A 157 FFHSLLGTNAKMLI 170 (292)
T ss_dssp HHHHTEEEEEEEEE
T ss_pred HHHHHcCCCcEEEE
Confidence 7755 599965444
No 7
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=93.50 E-value=0.35 Score=45.58 Aligned_cols=130 Identities=13% Similarity=0.174 Sum_probs=71.4
Q ss_pred HHHHHhhh-hcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcE
Q 045079 406 QTIRKLAE-KATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPF 484 (596)
Q Consensus 406 qaIleA~~-g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPF 484 (596)
+.+++.+. ..+..+|+|+|.+.|.- ...|+.+. |..++||||.. ...++.+.+++ +..+ ..
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~----~~~l~~~~---~~~~v~~vD~s------~~~~~~a~~~~----~~~~-~~ 94 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLL----SAFLMEKY---PEATFTLVDMS------EKMLEIAKNRF----RGNL-KV 94 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHH----HHHHHHHC---TTCEEEEEESC------HHHHHHHHHHT----CSCT-TE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHH----HHHHHHhC---CCCeEEEEECC------HHHHHHHHHhh----ccCC-CE
Confidence 55666665 45668999999999843 33344332 45799999973 23444443332 2222 33
Q ss_pred EEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeeeecCCCCcchhHHH
Q 045079 485 EYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGISNGTYNAPFFLAR 563 (596)
Q Consensus 485 eF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e~n~~~nsp~F~~R 563 (596)
+|. ...++++... +.+=+|-|...|||+.+. .+..+|+.+ |-|+|.-.++.......+.+.+...
T Consensus 95 ~~~--~~d~~~~~~~------~~fD~v~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~ 160 (234)
T 3dtn_A 95 KYI--EADYSKYDFE------EKYDMVVSALSIHHLEDE------DKKELYKRSYSILKESGIFINADLVHGETAFIENL 160 (234)
T ss_dssp EEE--ESCTTTCCCC------SCEEEEEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHH
T ss_pred EEE--eCchhccCCC------CCceEEEEeCccccCCHH------HHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhH
Confidence 433 2233333221 344456666788998653 234577776 4579987655443333344444444
Q ss_pred HHHH
Q 045079 564 FREA 567 (596)
Q Consensus 564 F~EA 567 (596)
+...
T Consensus 161 ~~~~ 164 (234)
T 3dtn_A 161 NKTI 164 (234)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 8
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=93.42 E-value=1.3 Score=42.60 Aligned_cols=126 Identities=15% Similarity=0.130 Sum_probs=66.2
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--E
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP--F 484 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP--F 484 (596)
.|++.+.-.+.-+|+|+|.+.|.-- ..|+.+- | |..++|||+....-....+.++.+.+++. ..+++ .
T Consensus 34 ~l~~~~~~~~~~~vLDiGcG~G~~~----~~l~~~~-g-~~~~v~gvD~s~~~~~~~~~~~~a~~~~~----~~~~~~~v 103 (275)
T 3bkx_A 34 AIAEAWQVKPGEKILEIGCGQGDLS----AVLADQV-G-SSGHVTGIDIASPDYGAPLTLGQAWNHLL----AGPLGDRL 103 (275)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSHHH----HHHHHHH-C-TTCEEEEECSSCTTCCSSSCHHHHHHHHH----TSTTGGGE
T ss_pred HHHHHcCCCCCCEEEEeCCCCCHHH----HHHHHHh-C-CCCEEEEEECCccccccHHHHHHHHHHHH----hcCCCCce
Confidence 4555554455668999999988533 3344332 2 44699999975320000013555444443 33442 4
Q ss_pred EEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHHhhCC--cEEEeeeecCC
Q 045079 485 EYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINP--DVFIHGISNGT 554 (596)
Q Consensus 485 eF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir~L~P--~Vfv~~e~n~~ 554 (596)
+|... . ++....+....+.+=+|-|...|||+.+. ..+++.++.+.| ..+++.+....
T Consensus 104 ~~~~~--d--~~~~~~~~~~~~~fD~v~~~~~l~~~~~~--------~~~~~~~~~l~~~gG~l~~~~~~~~ 163 (275)
T 3bkx_A 104 TVHFN--T--NLSDDLGPIADQHFDRVVLAHSLWYFASA--------NALALLFKNMAAVCDHVDVAEWSMQ 163 (275)
T ss_dssp EEECS--C--CTTTCCGGGTTCCCSEEEEESCGGGSSCH--------HHHHHHHHHHTTTCSEEEEEEECSS
T ss_pred EEEEC--C--hhhhccCCCCCCCEEEEEEccchhhCCCH--------HHHHHHHHHHhCCCCEEEEEEecCC
Confidence 44321 1 12222232222322233356667887753 358999999987 45555555443
No 9
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=93.07 E-value=0.98 Score=41.89 Aligned_cols=113 Identities=15% Similarity=0.259 Sum_probs=66.2
Q ss_pred HHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc-E
Q 045079 406 QTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP-F 484 (596)
Q Consensus 406 qaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP-F 484 (596)
..|++.+.-...-.|+|+|.+.|.--..|.+.. +|..++||||.. ...++.+.+++. ..+++ +
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~------~~~~~v~~vD~s------~~~~~~a~~~~~----~~~~~~~ 90 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMV------GEKGKVYAIDVQ------EEMVNYAWEKVN----KLGLKNV 90 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHH------TTTCEEEEEESC------HHHHHHHHHHHH----HHTCTTE
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHh------CCCcEEEEEECC------HHHHHHHHHHHH----HcCCCcE
Confidence 456666655566789999999996444444433 355699999973 344555544443 34554 4
Q ss_pred EEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEee
Q 045079 485 EYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHG 549 (596)
Q Consensus 485 eF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~ 549 (596)
+|.. ..++++. ...+.+=+|-|...|+|+.+ + ..+|+.+ +.|+|.-.++.
T Consensus 91 ~~~~--~d~~~~~-----~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~LkpgG~l~i 141 (219)
T 3dh0_A 91 EVLK--SEENKIP-----LPDNTVDFIFMAFTFHELSE-------P-LKFLEELKRVAKPFAYLAI 141 (219)
T ss_dssp EEEE--CBTTBCS-----SCSSCEEEEEEESCGGGCSS-------H-HHHHHHHHHHEEEEEEEEE
T ss_pred EEEe--cccccCC-----CCCCCeeEEEeehhhhhcCC-------H-HHHHHHHHHHhCCCeEEEE
Confidence 4432 2333322 22343555556677888754 2 4566655 66799865543
No 10
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=92.86 E-value=0.77 Score=42.82 Aligned_cols=118 Identities=17% Similarity=0.244 Sum_probs=67.2
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc---
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP--- 483 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP--- 483 (596)
.|++.+.....-.|+|+|.+.|. +...|+.+. |..++||||.. ...++.+.+++ +..+++
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~s------~~~~~~a~~~~----~~~~~~~~~ 82 (217)
T 3jwh_A 20 GVVAALKQSNARRVIDLGCGQGN----LLKILLKDS---FFEQITGVDVS------YRSLEIAQERL----DRLRLPRNQ 82 (217)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCH----HHHHHHHCT---TCSEEEEEESC------HHHHHHHHHHH----TTCCCCHHH
T ss_pred HHHHHHHhcCCCEEEEeCCCCCH----HHHHHHhhC---CCCEEEEEECC------HHHHHHHHHHH----HHhcCCccc
Confidence 34555555566699999999985 444555543 34699999973 34455444443 334443
Q ss_pred ---EEEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHH-hhCCcEEEeeeecCC
Q 045079 484 ---FEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIK-RINPDVFIHGISNGT 554 (596)
Q Consensus 484 ---FeF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir-~L~P~Vfv~~e~n~~ 554 (596)
++|.. ..++.... ....=++|+ |...|+|+.+. ....+|+.++ .|+|.-+++...+..
T Consensus 83 ~~~v~~~~--~d~~~~~~---~~~~fD~v~--~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~li~~~~~~ 144 (217)
T 3jwh_A 83 WERLQLIQ--GALTYQDK---RFHGYDAAT--VIEVIEHLDLS------RLGAFERVLFEFAQPKIVIVTTPNIE 144 (217)
T ss_dssp HTTEEEEE--CCTTSCCG---GGCSCSEEE--EESCGGGCCHH------HHHHHHHHHHTTTCCSEEEEEEEBHH
T ss_pred CcceEEEe--CCcccccc---cCCCcCEEe--eHHHHHcCCHH------HHHHHHHHHHHHcCCCEEEEEccCcc
Confidence 44432 22222211 111123333 66778888643 2357777765 469999887776643
No 11
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=92.66 E-value=2.3 Score=40.45 Aligned_cols=110 Identities=15% Similarity=0.198 Sum_probs=64.4
Q ss_pred HHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc-E
Q 045079 406 QTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP-F 484 (596)
Q Consensus 406 qaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP-F 484 (596)
.-+++.+.-.+.-+|+|+|.+.|. +...|+.+. + ++||||.. ...++.+.+++ +..|++ +
T Consensus 11 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~~vD~s------~~~~~~a~~~~----~~~~~~~v 71 (239)
T 1xxl_A 11 GLMIKTAECRAEHRVLDIGAGAGH----TALAFSPYV--Q---ECIGVDAT------KEMVEVASSFA----QEKGVENV 71 (239)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSH----HHHHHGGGS--S---EEEEEESC------HHHHHHHHHHH----HHHTCCSE
T ss_pred chHHHHhCcCCCCEEEEEccCcCH----HHHHHHHhC--C---EEEEEECC------HHHHHHHHHHH----HHcCCCCe
Confidence 344566666667789999999885 344555542 2 89999973 24455444443 334544 4
Q ss_pred EEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEee
Q 045079 485 EYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHG 549 (596)
Q Consensus 485 eF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~ 549 (596)
+|.. ..++++ ....+.+=+|-|.+.+||+.| + ..+|+.+ |-|+|.-.++.
T Consensus 72 ~~~~--~d~~~~-----~~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~LkpgG~l~~ 122 (239)
T 1xxl_A 72 RFQQ--GTAESL-----PFPDDSFDIITCRYAAHHFSD-------V-RKAVREVARVLKQDGRFLL 122 (239)
T ss_dssp EEEE--CBTTBC-----CSCTTCEEEEEEESCGGGCSC-------H-HHHHHHHHHHEEEEEEEEE
T ss_pred EEEe--cccccC-----CCCCCcEEEEEECCchhhccC-------H-HHHHHHHHHHcCCCcEEEE
Confidence 4432 233333 233344555667778888864 3 3455555 66799876554
No 12
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=91.92 E-value=1.2 Score=43.28 Aligned_cols=124 Identities=16% Similarity=0.208 Sum_probs=66.3
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEE
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEY 486 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF 486 (596)
.+++.+.-...-+|+|+|.+.|.-.. .|+. + ..++||||.. ...++.+.+++ -++.|.
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~----~l~~-~----~~~v~gvD~s------~~~~~~a~~~~------~~~~~~- 105 (279)
T 3ccf_A 48 DLLQLLNPQPGEFILDLGCGTGQLTE----KIAQ-S----GAEVLGTDNA------ATMIEKARQNY------PHLHFD- 105 (279)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSHHHH----HHHH-T----TCEEEEEESC------HHHHHHHHHHC------TTSCEE-
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHH----HHHh-C----CCeEEEEECC------HHHHHHHHhhC------CCCEEE-
Confidence 34455544455689999999985333 3443 2 2589999973 23344433332 134332
Q ss_pred EeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeeeecCCCCcchhHHHHH
Q 045079 487 NVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGISNGTYNAPFFLARFR 565 (596)
Q Consensus 487 ~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e~n~~~nsp~F~~RF~ 565 (596)
. ..++++. . ++.+=+|-|.+.|||+.| + ..+|+.+ |-|+|.-.++....+..+.+.+...+.
T Consensus 106 -~--~d~~~~~-----~-~~~fD~v~~~~~l~~~~d-------~-~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~ 168 (279)
T 3ccf_A 106 -V--ADARNFR-----V-DKPLDAVFSNAMLHWVKE-------P-EAAIASIHQALKSGGRFVAEFGGKGNIKYILEALY 168 (279)
T ss_dssp -E--CCTTTCC-----C-SSCEEEEEEESCGGGCSC-------H-HHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHH
T ss_pred -E--CChhhCC-----c-CCCcCEEEEcchhhhCcC-------H-HHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHH
Confidence 2 2223222 2 233445556677888875 2 3566655 667998765554433333334444554
Q ss_pred HHHH
Q 045079 566 EALF 569 (596)
Q Consensus 566 EAL~ 569 (596)
+.+.
T Consensus 169 ~~~~ 172 (279)
T 3ccf_A 169 NALE 172 (279)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 13
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=91.91 E-value=1.3 Score=43.25 Aligned_cols=110 Identities=11% Similarity=0.095 Sum_probs=64.9
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEE
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEY 486 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF 486 (596)
.+++.+...+.-+|+|+|.+.|. +...|+.+ | .++||||.. ...++.+.+ .++..|+..+|
T Consensus 111 ~~~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--g---~~v~~vD~s------~~~~~~a~~----~~~~~~~~~~~ 171 (286)
T 3m70_A 111 DVVDAAKIISPCKVLDLGCGQGR----NSLYLSLL--G---YDVTSWDHN------ENSIAFLNE----TKEKENLNIST 171 (286)
T ss_dssp HHHHHHHHSCSCEEEEESCTTCH----HHHHHHHT--T---CEEEEEESC------HHHHHHHHH----HHHHTTCCEEE
T ss_pred HHHHHhhccCCCcEEEECCCCCH----HHHHHHHC--C---CeEEEEECC------HHHHHHHHH----HHHHcCCceEE
Confidence 45555555567789999999985 44456655 2 389999973 234544433 34455665555
Q ss_pred EeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEee
Q 045079 487 NVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHG 549 (596)
Q Consensus 487 ~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~ 549 (596)
.. ..++++.. .+.+=+|-|...|||+.++ -+..+|+.+ +.|+|.-+++.
T Consensus 172 ~~--~d~~~~~~------~~~fD~i~~~~~~~~~~~~------~~~~~l~~~~~~LkpgG~l~i 221 (286)
T 3m70_A 172 AL--YDINAANI------QENYDFIVSTVVFMFLNRE------RVPSIIKNMKEHTNVGGYNLI 221 (286)
T ss_dssp EE--CCGGGCCC------CSCEEEEEECSSGGGSCGG------GHHHHHHHHHHTEEEEEEEEE
T ss_pred EE--eccccccc------cCCccEEEEccchhhCCHH------HHHHHHHHHHHhcCCCcEEEE
Confidence 43 33333322 2333344455577888643 245677776 55699876443
No 14
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=91.04 E-value=1.1 Score=43.63 Aligned_cols=107 Identities=11% Similarity=0.196 Sum_probs=58.1
Q ss_pred HHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--EE
Q 045079 408 IRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP--FE 485 (596)
Q Consensus 408 IleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP--Fe 485 (596)
|++.+.-...-+|+|+|.+.|. +...|+.+.| .++|||+.. ...++.+.+++ +..|+. .+
T Consensus 56 ~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~----~~v~gvd~s------~~~~~~a~~~~----~~~~~~~~~~ 117 (287)
T 1kpg_A 56 ALGKLGLQPGMTLLDVGCGWGA----TMMRAVEKYD----VNVVGLTLS------KNQANHVQQLV----ANSENLRSKR 117 (287)
T ss_dssp HHTTTTCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEESC------HHHHHHHHHHH----HTCCCCSCEE
T ss_pred HHHHcCCCCcCEEEEECCcccH----HHHHHHHHcC----CEEEEEECC------HHHHHHHHHHH----HhcCCCCCeE
Confidence 4444444556689999998774 4444553332 299999973 34455444433 344543 33
Q ss_pred EEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEe
Q 045079 486 YNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIH 548 (596)
Q Consensus 486 F~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~ 548 (596)
|. ...++++. +.+=+|-|...|+|+.++ . ...+|+.+ |-|+|.-.++
T Consensus 118 ~~--~~d~~~~~--------~~fD~v~~~~~l~~~~~~-----~-~~~~l~~~~~~LkpgG~l~ 165 (287)
T 1kpg_A 118 VL--LAGWEQFD--------EPVDRIVSIGAFEHFGHE-----R-YDAFFSLAHRLLPADGVML 165 (287)
T ss_dssp EE--ESCGGGCC--------CCCSEEEEESCGGGTCTT-----T-HHHHHHHHHHHSCTTCEEE
T ss_pred EE--ECChhhCC--------CCeeEEEEeCchhhcChH-----H-HHHHHHHHHHhcCCCCEEE
Confidence 32 23333332 212233355678888653 1 34566665 5679985443
No 15
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=90.70 E-value=9.7 Score=37.62 Aligned_cols=110 Identities=13% Similarity=0.103 Sum_probs=61.3
Q ss_pred eEEEEceecc---ccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeeccccc
Q 045079 418 LHIIDFGICY---GFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWE 494 (596)
Q Consensus 418 vHIIDfgI~~---G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E 494 (596)
-+|+|+|.+. | .+..+++.. . |..|||+||.. ...++.+.+++. . .-..+|.. ..+.
T Consensus 79 ~~vLDlGcG~pt~G-~~~~~~~~~---~---p~~~v~~vD~s------p~~l~~Ar~~~~---~--~~~v~~~~--~D~~ 138 (274)
T 2qe6_A 79 SQFLDLGSGLPTVQ-NTHEVAQSV---N---PDARVVYVDID------PMVLTHGRALLA---K--DPNTAVFT--ADVR 138 (274)
T ss_dssp CEEEEETCCSCCSS-CHHHHHHHH---C---TTCEEEEEESS------HHHHHHHHHHHT---T--CTTEEEEE--CCTT
T ss_pred CEEEEECCCCCCCC-hHHHHHHHh---C---CCCEEEEEECC------hHHHHHHHHhcC---C--CCCeEEEE--eeCC
Confidence 5899999999 8 343333332 1 34799999973 244555555542 1 11244433 2222
Q ss_pred ccCc--ccc----cccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHHh-hCCcE-EEeeeecC
Q 045079 495 TIRL--EDF----KIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKR-INPDV-FIHGISNG 553 (596)
Q Consensus 495 ~i~~--edL----~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir~-L~P~V-fv~~e~n~ 553 (596)
+... ... .++.+...+|-+...|||+.|+. ...+|+.|++ |+|.- +++.+...
T Consensus 139 ~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~------~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 139 DPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDV------VDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp CHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTT------HHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CchhhhccchhhccCCCCCCEEEEEechhhhCCcHH------HHHHHHHHHHhCCCCcEEEEEEecC
Confidence 2110 000 12223567777888999999862 3567777766 89975 34444433
No 16
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=90.40 E-value=2.1 Score=41.79 Aligned_cols=101 Identities=11% Similarity=0.179 Sum_probs=59.6
Q ss_pred cCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--EEEEeeccc
Q 045079 415 ATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP--FEYNVIAQK 492 (596)
Q Consensus 415 ~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP--FeF~~Ia~~ 492 (596)
...-+|+|+|.+.|..-..|.+.+ + .++|||+.. ...++.+.+++ +..|++ ++|.. ..
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~----~----~~v~gvD~s------~~~~~~a~~~~----~~~~~~~~~~~~~--~d 140 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKF----G----VSIDCLNIA------PVQNKRNEEYN----NQAGLADNITVKY--GS 140 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH----C----CEEEEEESC------HHHHHHHHHHH----HHHTCTTTEEEEE--CC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHh----C----CEEEEEeCC------HHHHHHHHHHH----HhcCCCcceEEEE--cC
Confidence 455689999999886544444433 2 389999973 34455544443 333443 44432 23
Q ss_pred ccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEe
Q 045079 493 WETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIH 548 (596)
Q Consensus 493 ~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~ 548 (596)
++++ ....+.+=+|-|...|+|+.| ...+|+.+ |-|+|.-.++
T Consensus 141 ~~~~-----~~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~ 184 (297)
T 2o57_A 141 FLEI-----PCEDNSYDFIWSQDAFLHSPD--------KLKVFQECARVLKPRGVMA 184 (297)
T ss_dssp TTSC-----SSCTTCEEEEEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEE
T ss_pred cccC-----CCCCCCEeEEEecchhhhcCC--------HHHHHHHHHHHcCCCeEEE
Confidence 3332 233345556667788889875 24566665 5579986443
No 17
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=90.27 E-value=2.6 Score=40.08 Aligned_cols=111 Identities=14% Similarity=0.239 Sum_probs=64.0
Q ss_pred hHHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcE
Q 045079 405 NQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPF 484 (596)
Q Consensus 405 NqaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPF 484 (596)
-..|++.+...+.-.|+|+|.+.|. +...|+.+ |+. ++||||.. ...++.+.+++. +...
T Consensus 33 ~~~l~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--~~~--~v~~vD~s------~~~~~~a~~~~~------~~~~ 92 (253)
T 3g5l_A 33 WHELKKMLPDFNQKTVLDLGCGFGW----HCIYAAEH--GAK--KVLGIDLS------ERMLTEAKRKTT------SPVV 92 (253)
T ss_dssp HHHHHTTCCCCTTCEEEEETCTTCH----HHHHHHHT--TCS--EEEEEESC------HHHHHHHHHHCC------CTTE
T ss_pred HHHHHHhhhccCCCEEEEECCCCCH----HHHHHHHc--CCC--EEEEEECC------HHHHHHHHHhhc------cCCe
Confidence 3455666655567899999999984 44555555 222 89999973 233443333322 2234
Q ss_pred EEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeee
Q 045079 485 EYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGI 550 (596)
Q Consensus 485 eF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e 550 (596)
+|.. ..+++ +....+.+=+|-|...|+|+.| ...+|+.+ |-|+|.-.++..
T Consensus 93 ~~~~--~d~~~-----~~~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 93 CYEQ--KAIED-----IAIEPDAYNVVLSSLALHYIAS--------FDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp EEEE--CCGGG-----CCCCTTCEEEEEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEE--cchhh-----CCCCCCCeEEEEEchhhhhhhh--------HHHHHHHHHHHcCCCcEEEEE
Confidence 4432 22332 2233344556666678888843 24677766 457998766553
No 18
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=90.22 E-value=1.4 Score=41.45 Aligned_cols=155 Identities=11% Similarity=0.098 Sum_probs=70.7
Q ss_pred HHHHHHHHHHhhcccchhhhHHHHhHHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCC
Q 045079 381 ADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGF 460 (596)
Q Consensus 381 ~d~lkAy~lf~~~~Pf~kfa~~~ANqaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gf 460 (596)
..+++++..|....++..-..-..-+.|...+...+.-+|+|+|.+.|.-= ..|+.+- ++..+||+|+..
T Consensus 23 ~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~----~~la~~~--~~~~~v~~vD~~---- 92 (221)
T 3u81_A 23 QSVLEAIDTYCTQKEWAMNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSA----VRMARLL--QPGARLLTMEIN---- 92 (221)
T ss_dssp HHHHHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHH----HHHHTTS--CTTCEEEEEESC----
T ss_pred HHHHHHHHHHhhhcCcCcccCHHHHHHHHHHHHhcCCCEEEEECCCCCHHH----HHHHHhC--CCCCEEEEEeCC----
Confidence 345555555544444432111122223333333344568999999988532 2334321 234699999973
Q ss_pred CChHHHHHHHHHHHHHHhhcCCc--EEEEeec--ccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHH
Q 045079 461 RPAERVEETGNRLKSYCERFNVP--FEYNVIA--QKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLD 536 (596)
Q Consensus 461 rp~~~leetG~rL~~~A~~~gVP--FeF~~Ia--~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~ 536 (596)
...++.+.++ ++..|+. ++|..-. .-++.+.. ......=++|+++... ++.. +...++.
T Consensus 93 --~~~~~~a~~~----~~~~~~~~~v~~~~~d~~~~l~~~~~-~~~~~~fD~V~~d~~~--~~~~--------~~~~~~~ 155 (221)
T 3u81_A 93 --PDCAAITQQM----LNFAGLQDKVTILNGASQDLIPQLKK-KYDVDTLDMVFLDHWK--DRYL--------PDTLLLE 155 (221)
T ss_dssp --HHHHHHHHHH----HHHHTCGGGEEEEESCHHHHGGGTTT-TSCCCCCSEEEECSCG--GGHH--------HHHHHHH
T ss_pred --hHHHHHHHHH----HHHcCCCCceEEEECCHHHHHHHHHH-hcCCCceEEEEEcCCc--ccch--------HHHHHHH
Confidence 2445544443 3344553 5553211 01111110 0001122455554321 1111 1224555
Q ss_pred HHHhhCCcEEEeeeecCCCCcchhHH
Q 045079 537 LIKRINPDVFIHGISNGTYNAPFFLA 562 (596)
Q Consensus 537 ~Ir~L~P~Vfv~~e~n~~~nsp~F~~ 562 (596)
.++.|+|.-+++...-...+.+.|..
T Consensus 156 ~~~~LkpgG~lv~~~~~~~~~~~~~~ 181 (221)
T 3u81_A 156 KCGLLRKGTVLLADNVIVPGTPDFLA 181 (221)
T ss_dssp HTTCCCTTCEEEESCCCCCCCHHHHH
T ss_pred hccccCCCeEEEEeCCCCcchHHHHH
Confidence 55889999887654333333333433
No 19
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=90.04 E-value=1.6 Score=40.39 Aligned_cols=109 Identities=16% Similarity=0.170 Sum_probs=59.8
Q ss_pred HHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEE
Q 045079 406 QTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFE 485 (596)
Q Consensus 406 qaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFe 485 (596)
..+++.+...+.-+|+|+|.+.|. +...|+.+ | .++||||.. ...++.+.+++. -++.
T Consensus 35 ~~~l~~~~~~~~~~vLDiGcG~G~----~~~~l~~~--~---~~v~~vD~s------~~~~~~a~~~~~-----~~~~-- 92 (220)
T 3hnr_A 35 EDILEDVVNKSFGNVLEFGVGTGN----LTNKLLLA--G---RTVYGIEPS------REMRMIAKEKLP-----KEFS-- 92 (220)
T ss_dssp HHHHHHHHHTCCSEEEEECCTTSH----HHHHHHHT--T---CEEEEECSC------HHHHHHHHHHSC-----TTCC--
T ss_pred HHHHHHhhccCCCeEEEeCCCCCH----HHHHHHhC--C---CeEEEEeCC------HHHHHHHHHhCC-----CceE--
Confidence 456666666677899999999984 45556655 2 489999973 233433332221 1232
Q ss_pred EEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeee
Q 045079 486 YNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGI 550 (596)
Q Consensus 486 F~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e 550 (596)
|. ...++++... ..=++ |-|...|||+.+.. +..+|+.+ +.|+|.-.++..
T Consensus 93 ~~--~~d~~~~~~~----~~fD~--v~~~~~l~~~~~~~------~~~~l~~~~~~LkpgG~l~i~ 144 (220)
T 3hnr_A 93 IT--EGDFLSFEVP----TSIDT--IVSTYAFHHLTDDE------KNVAIAKYSQLLNKGGKIVFA 144 (220)
T ss_dssp EE--SCCSSSCCCC----SCCSE--EEEESCGGGSCHHH------HHHHHHHHHHHSCTTCEEEEE
T ss_pred EE--eCChhhcCCC----CCeEE--EEECcchhcCChHH------HHHHHHHHHHhcCCCCEEEEE
Confidence 22 2223332211 12233 33456788887531 23366665 567998655443
No 20
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=89.77 E-value=2.8 Score=40.41 Aligned_cols=107 Identities=11% Similarity=0.154 Sum_probs=62.7
Q ss_pred HHHhhh-hcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--E
Q 045079 408 IRKLAE-KATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP--F 484 (596)
Q Consensus 408 IleA~~-g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP--F 484 (596)
+++.+. -...-+|+|+|.+.| .+...|+.+ |..++||||.. ...++.+.+ .++..|++ .
T Consensus 37 ~l~~l~~~~~~~~vLDiGcG~G----~~~~~la~~----~~~~v~gvD~s------~~~~~~a~~----~~~~~~~~~~v 98 (267)
T 3kkz_A 37 ALSFIDNLTEKSLIADIGCGTG----GQTMVLAGH----VTGQVTGLDFL------SGFIDIFNR----NARQSGLQNRV 98 (267)
T ss_dssp HHTTCCCCCTTCEEEEETCTTC----HHHHHHHTT----CSSEEEEEESC------HHHHHHHHH----HHHHTTCTTTE
T ss_pred HHHhcccCCCCCEEEEeCCCCC----HHHHHHHhc----cCCEEEEEeCC------HHHHHHHHH----HHHHcCCCcCc
Confidence 444443 234568999999877 455566666 34699999973 234544433 34555665 5
Q ss_pred EEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEe
Q 045079 485 EYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIH 548 (596)
Q Consensus 485 eF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~ 548 (596)
+|.. ..++++. ...+.+=+|-|...++|+ + ...+|+.+ +-|+|.-.++
T Consensus 99 ~~~~--~d~~~~~-----~~~~~fD~i~~~~~~~~~-~--------~~~~l~~~~~~LkpgG~l~ 147 (267)
T 3kkz_A 99 TGIV--GSMDDLP-----FRNEELDLIWSEGAIYNI-G--------FERGLNEWRKYLKKGGYLA 147 (267)
T ss_dssp EEEE--CCTTSCC-----CCTTCEEEEEESSCGGGT-C--------HHHHHHHHGGGEEEEEEEE
T ss_pred EEEE--cChhhCC-----CCCCCEEEEEEcCCceec-C--------HHHHHHHHHHHcCCCCEEE
Confidence 5543 3333332 223445556666777887 3 24566666 5569986544
No 21
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=89.76 E-value=1.7 Score=39.82 Aligned_cols=97 Identities=13% Similarity=0.059 Sum_probs=55.8
Q ss_pred eeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeeccccccc
Q 045079 417 RLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETI 496 (596)
Q Consensus 417 ~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E~i 496 (596)
.-+|+|+|.+.|. +...|+.+ | .++||||.. ...++.+.++ .-..+|. ...+++
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s------~~~~~~a~~~--------~~~~~~~--~~d~~~- 95 (203)
T 3h2b_A 42 DGVILDVGSGTGR----WTGHLASL--G---HQIEGLEPA------TRLVELARQT--------HPSVTFH--HGTITD- 95 (203)
T ss_dssp CSCEEEETCTTCH----HHHHHHHT--T---CCEEEECCC------HHHHHHHHHH--------CTTSEEE--CCCGGG-
T ss_pred CCeEEEecCCCCH----HHHHHHhc--C---CeEEEEeCC------HHHHHHHHHh--------CCCCeEE--eCcccc-
Confidence 6689999999985 45566655 2 389999973 2334433333 1122332 222333
Q ss_pred CcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEee
Q 045079 497 RLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHG 549 (596)
Q Consensus 497 ~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~ 549 (596)
+....+.+=+|-|...|+|+..+. ...+|+.+ +.|+|.-.++.
T Consensus 96 ----~~~~~~~fD~v~~~~~l~~~~~~~------~~~~l~~~~~~L~pgG~l~i 139 (203)
T 3h2b_A 96 ----LSDSPKRWAGLLAWYSLIHMGPGE------LPDALVALRMAVEDGGGLLM 139 (203)
T ss_dssp ----GGGSCCCEEEEEEESSSTTCCTTT------HHHHHHHHHHTEEEEEEEEE
T ss_pred ----cccCCCCeEEEEehhhHhcCCHHH------HHHHHHHHHHHcCCCcEEEE
Confidence 223334455666777889987432 34566665 56799765443
No 22
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=89.46 E-value=2.5 Score=40.08 Aligned_cols=109 Identities=15% Similarity=0.188 Sum_probs=61.1
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--E
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP--F 484 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP--F 484 (596)
.|++.+.-...-+|+|+|.+.|.. ...|+.+.+ .++||||.. ...++.+.++ ++..|++ .
T Consensus 27 ~l~~~~~~~~~~~VLDiGcG~G~~----~~~la~~~~----~~v~gvD~s------~~~l~~a~~~----~~~~~~~~~v 88 (256)
T 1nkv_A 27 TLGRVLRMKPGTRILDLGSGSGEM----LCTWARDHG----ITGTGIDMS------SLFTAQAKRR----AEELGVSERV 88 (256)
T ss_dssp HHHHHTCCCTTCEEEEETCTTCHH----HHHHHHHTC----CEEEEEESC------HHHHHHHHHH----HHHTTCTTTE
T ss_pred HHHHhcCCCCCCEEEEECCCCCHH----HHHHHHhcC----CeEEEEeCC------HHHHHHHHHH----HHhcCCCcce
Confidence 344554434556899999999863 333443332 378999973 2345544333 4445654 5
Q ss_pred EEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEee
Q 045079 485 EYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHG 549 (596)
Q Consensus 485 eF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~ 549 (596)
+|.. ..++++.. .+.+=+|-|...+||+.| + ..+|+.+ |-|+|.-.++.
T Consensus 89 ~~~~--~d~~~~~~------~~~fD~V~~~~~~~~~~~-------~-~~~l~~~~r~LkpgG~l~~ 138 (256)
T 1nkv_A 89 HFIH--NDAAGYVA------NEKCDVAACVGATWIAGG-------F-AGAEELLAQSLKPGGIMLI 138 (256)
T ss_dssp EEEE--SCCTTCCC------SSCEEEEEEESCGGGTSS-------S-HHHHHHHTTSEEEEEEEEE
T ss_pred EEEE--CChHhCCc------CCCCCEEEECCChHhcCC-------H-HHHHHHHHHHcCCCeEEEE
Confidence 5543 23333321 233445556677788764 2 4566666 55699865443
No 23
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=89.42 E-value=5.7 Score=37.53 Aligned_cols=102 Identities=17% Similarity=0.150 Sum_probs=57.3
Q ss_pred cCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeeccccc
Q 045079 415 ATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWE 494 (596)
Q Consensus 415 ~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E 494 (596)
.+.-+|+|+|.+.|.-- ..|+.+ + .++||||.. ...++.+.+++ +...-.++|.. ..++
T Consensus 38 ~~~~~vLDiG~G~G~~~----~~l~~~-~----~~v~~vD~s------~~~~~~a~~~~----~~~~~~~~~~~--~d~~ 96 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIA----LPLIAR-G----YRYIALDAD------AAMLEVFRQKI----AGVDRKVQVVQ--ADAR 96 (263)
T ss_dssp SSCCEEEEETCTTSTTH----HHHHTT-T----CEEEEEESC------HHHHHHHHHHT----TTSCTTEEEEE--SCTT
T ss_pred CCCCEEEEeCCcCCHHH----HHHHHC-C----CEEEEEECC------HHHHHHHHHHh----hccCCceEEEE--cccc
Confidence 44568999999998532 344444 2 489999973 34455444433 22223344432 2233
Q ss_pred ccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeee
Q 045079 495 TIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGI 550 (596)
Q Consensus 495 ~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e 550 (596)
++ .+..+.+=+|-|.+.|||+.| + ..+|+.+ |-|+|.-.++..
T Consensus 97 ~~-----~~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 97 AI-----PLPDESVHGVIVVHLWHLVPD-------W-PKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp SC-----CSCTTCEEEEEEESCGGGCTT-------H-HHHHHHHHHHEEEEEEEEEE
T ss_pred cC-----CCCCCCeeEEEECCchhhcCC-------H-HHHHHHHHHHCCCCcEEEEE
Confidence 33 223333445556677888864 2 4566655 667998765544
No 24
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=89.29 E-value=3.3 Score=37.37 Aligned_cols=110 Identities=9% Similarity=0.071 Sum_probs=61.6
Q ss_pred HHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCC-cE
Q 045079 406 QTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNV-PF 484 (596)
Q Consensus 406 qaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gV-PF 484 (596)
+.|++.+...+.-+|+|+|.+.|. +...|+.+ + .++||||.. ...++.+.+++. ..++ ..
T Consensus 22 ~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~vD~s------~~~~~~a~~~~~----~~~~~~~ 82 (199)
T 2xvm_A 22 SEVLEAVKVVKPGKTLDLGCGNGR----NSLYLAAN-G----YDVDAWDKN------AMSIANVERIKS----IENLDNL 82 (199)
T ss_dssp HHHHHHTTTSCSCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESC------HHHHHHHHHHHH----HHTCTTE
T ss_pred HHHHHHhhccCCCeEEEEcCCCCH----HHHHHHHC-C----CeEEEEECC------HHHHHHHHHHHH----hCCCCCc
Confidence 355666655455699999999885 34455555 2 389999973 244554444433 3344 34
Q ss_pred EEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEe
Q 045079 485 EYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIH 548 (596)
Q Consensus 485 eF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~ 548 (596)
+|.. ..++++. . .+.+=+|-|...|||+.++. ...+|+.+ +-|+|.-.++
T Consensus 83 ~~~~--~d~~~~~-----~-~~~~D~v~~~~~l~~~~~~~------~~~~l~~~~~~L~~gG~l~ 133 (199)
T 2xvm_A 83 HTRV--VDLNNLT-----F-DRQYDFILSTVVLMFLEAKT------IPGLIANMQRCTKPGGYNL 133 (199)
T ss_dssp EEEE--CCGGGCC-----C-CCCEEEEEEESCGGGSCGGG------HHHHHHHHHHTEEEEEEEE
T ss_pred EEEE--cchhhCC-----C-CCCceEEEEcchhhhCCHHH------HHHHHHHHHHhcCCCeEEE
Confidence 4432 2333322 2 23333444556778876432 35566666 5569986533
No 25
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=89.10 E-value=5.1 Score=40.35 Aligned_cols=110 Identities=7% Similarity=0.109 Sum_probs=60.5
Q ss_pred eeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhc---CCcEEEEeecc--
Q 045079 417 RLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERF---NVPFEYNVIAQ-- 491 (596)
Q Consensus 417 ~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~---gVPFeF~~Ia~-- 491 (596)
.-+|+|+|.|.|.- +..++.+.+ -++||||.. ...|+.+.++..+..... -+.++|.....
T Consensus 49 ~~~VLDlGCG~G~~----l~~~~~~~~----~~v~GiD~S------~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~ 114 (302)
T 2vdw_A 49 KRKVLAIDFGNGAD----LEKYFYGEI----ALLVATDPD------ADAIARGNERYNKLNSGIKTKYYKFDYIQETIRS 114 (302)
T ss_dssp CCEEEETTCTTTTT----HHHHHHTTC----SEEEEEESC------HHHHHHHHHHHHHHCC----CCCEEEEEECCTTS
T ss_pred CCeEEEEecCCcHh----HHHHHhcCC----CeEEEEECC------HHHHHHHHHHHHhccccccccccccchhhhhccc
Confidence 46899999999842 222332322 379999973 456777766654321100 01245543211
Q ss_pred c-c-cccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEe
Q 045079 492 K-W-ETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIH 548 (596)
Q Consensus 492 ~-~-E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~ 548 (596)
. + +++. + ....+..=+|.|++.||++.+.. .+..+|+.| |-|+|.-.++
T Consensus 115 d~~~~~l~-~--~~~~~~FD~V~~~~~lhy~~~~~-----~~~~~l~~~~r~LkpGG~~i 166 (302)
T 2vdw_A 115 DTFVSSVR-E--VFYFGKFNIIDWQFAIHYSFHPR-----HYATVMNNLSELTASGGKVL 166 (302)
T ss_dssp SSHHHHHH-T--TCCSSCEEEEEEESCGGGTCSTT-----THHHHHHHHHHHEEEEEEEE
T ss_pred chhhhhhh-c--cccCCCeeEEEECchHHHhCCHH-----HHHHHHHHHHHHcCCCCEEE
Confidence 1 0 1111 0 01234555788999999876531 135778777 5579987554
No 26
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=89.07 E-value=2.6 Score=40.44 Aligned_cols=109 Identities=17% Similarity=0.306 Sum_probs=61.8
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--E
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP--F 484 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP--F 484 (596)
.|++.+.-...-+|+|+|.+.|. +...|+.+.+ .++|||+.. ...++.+.++ ++..|++ .
T Consensus 52 ~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~----~~v~gvD~s------~~~~~~a~~~----~~~~~~~~~~ 113 (273)
T 3bus_A 52 EMIALLDVRSGDRVLDVGCGIGK----PAVRLATARD----VRVTGISIS------RPQVNQANAR----ATAAGLANRV 113 (273)
T ss_dssp HHHHHSCCCTTCEEEEESCTTSH----HHHHHHHHSC----CEEEEEESC------HHHHHHHHHH----HHHTTCTTTE
T ss_pred HHHHhcCCCCCCEEEEeCCCCCH----HHHHHHHhcC----CEEEEEeCC------HHHHHHHHHH----HHhcCCCcce
Confidence 34454443456699999998885 3334444332 599999973 2345444333 3444554 4
Q ss_pred EEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHHh-hCCcEEEe
Q 045079 485 EYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKR-INPDVFIH 548 (596)
Q Consensus 485 eF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir~-L~P~Vfv~ 548 (596)
+|.. ..++++ ....+.+=+|-|...|+|+.| ...+|+.+++ |+|.-.++
T Consensus 114 ~~~~--~d~~~~-----~~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~ 163 (273)
T 3bus_A 114 TFSY--ADAMDL-----PFEDASFDAVWALESLHHMPD--------RGRALREMARVLRPGGTVA 163 (273)
T ss_dssp EEEE--CCTTSC-----CSCTTCEEEEEEESCTTTSSC--------HHHHHHHHHTTEEEEEEEE
T ss_pred EEEE--CccccC-----CCCCCCccEEEEechhhhCCC--------HHHHHHHHHHHcCCCeEEE
Confidence 4433 223322 223344445566777888865 2567777654 69986443
No 27
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=87.91 E-value=4.1 Score=39.55 Aligned_cols=102 Identities=16% Similarity=0.228 Sum_probs=58.9
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--EEEEeecccc
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP--FEYNVIAQKW 493 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP--FeF~~Ia~~~ 493 (596)
+..+|+|+|.+.|. +...|+.+ | .++||||.. ...++.+.++ ++..|++ .+|.. ..+
T Consensus 68 ~~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s------~~~~~~a~~~----~~~~~~~~~v~~~~--~d~ 126 (285)
T 4htf_A 68 QKLRVLDAGGGEGQ----TAIKMAER--G---HQVILCDLS------AQMIDRAKQA----AEAKGVSDNMQFIH--CAA 126 (285)
T ss_dssp SCCEEEEETCTTCH----HHHHHHHT--T---CEEEEEESC------HHHHHHHHHH----HHC-CCGGGEEEEE--SCG
T ss_pred CCCEEEEeCCcchH----HHHHHHHC--C---CEEEEEECC------HHHHHHHHHH----HHhcCCCcceEEEE--cCH
Confidence 35789999999983 45556655 2 489999973 2345444333 3445654 44432 233
Q ss_pred cccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeee
Q 045079 494 ETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGI 550 (596)
Q Consensus 494 E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e 550 (596)
+++. ...++.+=+|-|...|+|+.| | ..+|+.+ +-|+|.-.++..
T Consensus 127 ~~~~----~~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~LkpgG~l~~~ 172 (285)
T 4htf_A 127 QDVA----SHLETPVDLILFHAVLEWVAD-------P-RSVLQTLWSVLRPGGVLSLM 172 (285)
T ss_dssp GGTG----GGCSSCEEEEEEESCGGGCSC-------H-HHHHHHHHHTEEEEEEEEEE
T ss_pred HHhh----hhcCCCceEEEECchhhcccC-------H-HHHHHHHHHHcCCCeEEEEE
Confidence 3332 022344545566778888864 3 3566655 567998765543
No 28
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=87.48 E-value=2.1 Score=40.56 Aligned_cols=116 Identities=13% Similarity=0.144 Sum_probs=62.5
Q ss_pred HHHhHHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcC
Q 045079 402 LFANQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFN 481 (596)
Q Consensus 402 ~~ANqaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~g 481 (596)
......|++.+.-...-+|+|+|.+.|. +...|+.+.+ .++||||.. ...++.+.+++...
T Consensus 41 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~~~----~~v~~vD~s------~~~~~~a~~~~~~~----- 101 (266)
T 3ujc_A 41 LEATKKILSDIELNENSKVLDIGSGLGG----GCMYINEKYG----AHTHGIDIC------SNIVNMANERVSGN----- 101 (266)
T ss_dssp HHHHHHHTTTCCCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEESC------HHHHHHHHHTCCSC-----
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCH----HHHHHHHHcC----CEEEEEeCC------HHHHHHHHHHhhcC-----
Confidence 3344566666655566799999999884 3333443322 489999973 23343332222111
Q ss_pred CcEEEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEee
Q 045079 482 VPFEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHG 549 (596)
Q Consensus 482 VPFeF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~ 549 (596)
-..+|.. ..+++ +....+.+=+|-|...|||+.+. -...+|+.+ |-|+|.-.++.
T Consensus 102 ~~~~~~~--~d~~~-----~~~~~~~fD~v~~~~~l~~~~~~------~~~~~l~~~~~~L~pgG~l~~ 157 (266)
T 3ujc_A 102 NKIIFEA--NDILT-----KEFPENNFDLIYSRDAILALSLE------NKNKLFQKCYKWLKPTGTLLI 157 (266)
T ss_dssp TTEEEEE--CCTTT-----CCCCTTCEEEEEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEE
T ss_pred CCeEEEE--Ccccc-----CCCCCCcEEEEeHHHHHHhcChH------HHHHHHHHHHHHcCCCCEEEE
Confidence 2334432 22222 22223445566677788888432 134566665 56799764443
No 29
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=87.16 E-value=4.9 Score=39.55 Aligned_cols=115 Identities=12% Similarity=0.181 Sum_probs=63.3
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--E
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP--F 484 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP--F 484 (596)
.|++.+.-...-+|+|+|.+.|. +...|+.+.| .++|||+.. ...++.+.++ ++..|++ .
T Consensus 63 ~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s------~~~~~~a~~~----~~~~~~~~~v 124 (302)
T 3hem_A 63 LALDKLNLEPGMTLLDIGCGWGS----TMRHAVAEYD----VNVIGLTLS------ENQYAHDKAM----FDEVDSPRRK 124 (302)
T ss_dssp HHHHTTCCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEECC------HHHHHHHHHH----HHHSCCSSCE
T ss_pred HHHHHcCCCCcCEEEEeeccCcH----HHHHHHHhCC----CEEEEEECC------HHHHHHHHHH----HHhcCCCCce
Confidence 34555544556789999998774 4444554432 589999973 3445544444 3445665 4
Q ss_pred EEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcC-CCCcHHHHHHHH-HhhCCcEEEee
Q 045079 485 EYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVV-DSSPRDAVLDLI-KRINPDVFIHG 549 (596)
Q Consensus 485 eF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~-~~spRd~vL~~I-r~L~P~Vfv~~ 549 (596)
+|. ...++++ ++.+=+|-|...|+|+.|.... ...-...+|+.+ |-|+|.-.++.
T Consensus 125 ~~~--~~d~~~~--------~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 181 (302)
T 3hem_A 125 EVR--IQGWEEF--------DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLL 181 (302)
T ss_dssp EEE--ECCGGGC--------CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEE
T ss_pred EEE--ECCHHHc--------CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 443 3334433 2222233345778899764110 001235677766 55799865443
No 30
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=86.87 E-value=4.3 Score=35.92 Aligned_cols=102 Identities=13% Similarity=0.142 Sum_probs=57.5
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEE
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEY 486 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF 486 (596)
.+++.+.-.+.-.|+|+|.+.|. +...|+.+. . ++||||.. ...++.+.++ .-..+|
T Consensus 8 ~~~~~~~~~~~~~vLDiG~G~G~----~~~~l~~~~----~-~v~~vD~s------~~~~~~a~~~--------~~~v~~ 64 (170)
T 3i9f_A 8 EYLPNIFEGKKGVIVDYGCGNGF----YCKYLLEFA----T-KLYCIDIN------VIALKEVKEK--------FDSVIT 64 (170)
T ss_dssp TTHHHHHSSCCEEEEEETCTTCT----THHHHHTTE----E-EEEEECSC------HHHHHHHHHH--------CTTSEE
T ss_pred HHHHhcCcCCCCeEEEECCCCCH----HHHHHHhhc----C-eEEEEeCC------HHHHHHHHHh--------CCCcEE
Confidence 34555555667789999999986 334455443 3 99999973 2334443333 111222
Q ss_pred EeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEee
Q 045079 487 NVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHG 549 (596)
Q Consensus 487 ~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~ 549 (596)
.. .. +....+.+=+|-|...++|+.+ + ..+|+.+ |.|+|.-.++.
T Consensus 65 ~~--~d--------~~~~~~~~D~v~~~~~l~~~~~-------~-~~~l~~~~~~L~pgG~l~~ 110 (170)
T 3i9f_A 65 LS--DP--------KEIPDNSVDFILFANSFHDMDD-------K-QHVISEVKRILKDDGRVII 110 (170)
T ss_dssp ES--SG--------GGSCTTCEEEEEEESCSTTCSC-------H-HHHHHHHHHHEEEEEEEEE
T ss_pred Ee--CC--------CCCCCCceEEEEEccchhcccC-------H-HHHHHHHHHhcCCCCEEEE
Confidence 21 11 3333344445556677888854 3 4566655 66799765543
No 31
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=86.79 E-value=5.6 Score=36.64 Aligned_cols=109 Identities=14% Similarity=0.177 Sum_probs=62.4
Q ss_pred HHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEE
Q 045079 408 IRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYN 487 (596)
Q Consensus 408 IleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~ 487 (596)
|...+...+.-+|+|+|.+.|. +...|+.+ | -++||||.. ...++.+.+++.. .+ .++|.
T Consensus 43 l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~--~---~~v~~vD~s------~~~~~~a~~~~~~----~~-~~~~~ 102 (216)
T 3ofk_A 43 LRLSLSSGAVSNGLEIGCAAGA----FTEKLAPH--C---KRLTVIDVM------PRAIGRACQRTKR----WS-HISWA 102 (216)
T ss_dssp HHHHTTTSSEEEEEEECCTTSH----HHHHHGGG--E---EEEEEEESC------HHHHHHHHHHTTT----CS-SEEEE
T ss_pred HHHHcccCCCCcEEEEcCCCCH----HHHHHHHc--C---CEEEEEECC------HHHHHHHHHhccc----CC-CeEEE
Confidence 3334455677899999999984 44555554 2 489999973 2445544433322 22 34443
Q ss_pred eecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEee
Q 045079 488 VIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHG 549 (596)
Q Consensus 488 ~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~ 549 (596)
. ..++++. ..+.+=+|-|...|||+.+.. ....+|+.+ +.|+|.-+++.
T Consensus 103 ~--~d~~~~~------~~~~fD~v~~~~~l~~~~~~~-----~~~~~l~~~~~~L~pgG~l~~ 152 (216)
T 3ofk_A 103 A--TDILQFS------TAELFDLIVVAEVLYYLEDMT-----QMRTAIDNMVKMLAPGGHLVF 152 (216)
T ss_dssp E--CCTTTCC------CSCCEEEEEEESCGGGSSSHH-----HHHHHHHHHHHTEEEEEEEEE
T ss_pred E--cchhhCC------CCCCccEEEEccHHHhCCCHH-----HHHHHHHHHHHHcCCCCEEEE
Confidence 2 2333332 123344566668888988631 123556655 56799876554
No 32
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=86.76 E-value=2.7 Score=41.30 Aligned_cols=111 Identities=13% Similarity=0.167 Sum_probs=61.7
Q ss_pred cCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeeccccc
Q 045079 415 ATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWE 494 (596)
Q Consensus 415 ~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E 494 (596)
...-+|+|+|.+.|. +...|+.+- ++..++||||.. ...++.+.+++... ....-..+|.. ..++
T Consensus 35 ~~~~~vLDiGcG~G~----~~~~la~~~--~~~~~v~gvD~s------~~~~~~a~~~~~~~-~~~~~~v~~~~--~d~~ 99 (299)
T 3g5t_A 35 GERKLLVDVGCGPGT----ATLQMAQEL--KPFEQIIGSDLS------ATMIKTAEVIKEGS-PDTYKNVSFKI--SSSD 99 (299)
T ss_dssp SCCSEEEEETCTTTH----HHHHHHHHS--SCCSEEEEEESC------HHHHHHHHHHHHHC-C-CCTTEEEEE--CCTT
T ss_pred CCCCEEEEECCCCCH----HHHHHHHhC--CCCCEEEEEeCC------HHHHHHHHHHHHhc-cCCCCceEEEE--cCHH
Confidence 467789999999884 333444321 134699999973 34455554444332 00123445543 3344
Q ss_pred ccCccc-ccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEee
Q 045079 495 TIRLED-FKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHG 549 (596)
Q Consensus 495 ~i~~ed-L~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~ 549 (596)
++...+ ..+..+.+=+|-|...|||+ | ...+|..+ |-|+|.-.++.
T Consensus 100 ~~~~~~~~~~~~~~fD~V~~~~~l~~~-~--------~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 100 DFKFLGADSVDKQKIDMITAVECAHWF-D--------FEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CCGGGCTTTTTSSCEEEEEEESCGGGS-C--------HHHHHHHHHHHEEEEEEEEE
T ss_pred hCCccccccccCCCeeEEeHhhHHHHh-C--------HHHHHHHHHHhcCCCcEEEE
Confidence 333222 11222556677777889998 4 24566655 56799876544
No 33
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=86.70 E-value=2.7 Score=38.50 Aligned_cols=109 Identities=17% Similarity=0.247 Sum_probs=61.4
Q ss_pred hHHHHHhhh-hcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCC-
Q 045079 405 NQTIRKLAE-KATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNV- 482 (596)
Q Consensus 405 NqaIleA~~-g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gV- 482 (596)
...|++.+. -...-+|+|+|.+.|. +...|+.+ | .++||||.. ...+ +.|+..++
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~~D~s------~~~~--------~~a~~~~~~ 90 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGY----WTRHLSGL--A---DRVTALDGS------AEMI--------AEAGRHGLD 90 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSH----HHHHHHHH--S---SEEEEEESC------HHHH--------HHHGGGCCT
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCH----HHHHHHhc--C---CeEEEEeCC------HHHH--------HHHHhcCCC
Confidence 345666665 2334599999999985 33444444 2 489999973 2223 33333442
Q ss_pred cEEEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeee
Q 045079 483 PFEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGI 550 (596)
Q Consensus 483 PFeF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e 550 (596)
..+|.. ..+++ + ...+.+=+|-|...|||+.++. +..+|+.+ +-|+|.-.++..
T Consensus 91 ~~~~~~--~d~~~-----~-~~~~~~D~v~~~~~l~~~~~~~------~~~~l~~~~~~L~pgG~l~~~ 145 (218)
T 3ou2_A 91 NVEFRQ--QDLFD-----W-TPDRQWDAVFFAHWLAHVPDDR------FEAFWESVRSAVAPGGVVEFV 145 (218)
T ss_dssp TEEEEE--CCTTS-----C-CCSSCEEEEEEESCGGGSCHHH------HHHHHHHHHHHEEEEEEEEEE
T ss_pred CeEEEe--ccccc-----C-CCCCceeEEEEechhhcCCHHH------HHHHHHHHHHHcCCCeEEEEE
Confidence 244432 22222 2 2234444566677889987531 35677766 566997654433
No 34
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=86.70 E-value=2.8 Score=39.63 Aligned_cols=114 Identities=12% Similarity=0.057 Sum_probs=62.3
Q ss_pred HHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEE
Q 045079 406 QTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFE 485 (596)
Q Consensus 406 qaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFe 485 (596)
..+++.+......+|+|+|.+.|.-- ..|+.+. ..++|||+.. ...++.+.+++.. . -..+
T Consensus 83 ~~~l~~l~~~~~~~vLDiG~G~G~~~----~~l~~~~----~~~v~~vD~s------~~~~~~a~~~~~~----~-~~~~ 143 (254)
T 1xtp_A 83 RNFIASLPGHGTSRALDCGAGIGRIT----KNLLTKL----YATTDLLEPV------KHMLEEAKRELAG----M-PVGK 143 (254)
T ss_dssp HHHHHTSTTCCCSEEEEETCTTTHHH----HHTHHHH----CSEEEEEESC------HHHHHHHHHHTTT----S-SEEE
T ss_pred HHHHHhhcccCCCEEEEECCCcCHHH----HHHHHhh----cCEEEEEeCC------HHHHHHHHHHhcc----C-CceE
Confidence 44555555556779999999998633 3333321 2489999963 2344444333322 1 2233
Q ss_pred EEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeeee
Q 045079 486 YNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGIS 551 (596)
Q Consensus 486 F~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e~ 551 (596)
|. ...++++. ...+.+=+|-|.+.|||+.++. ...+|+.+ |.|+|.-.++...
T Consensus 144 ~~--~~d~~~~~-----~~~~~fD~v~~~~~l~~~~~~~------~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 144 FI--LASMETAT-----LPPNTYDLIVIQWTAIYLTDAD------FVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp EE--ESCGGGCC-----CCSSCEEEEEEESCGGGSCHHH------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EE--EccHHHCC-----CCCCCeEEEEEcchhhhCCHHH------HHHHHHHHHHhcCCCeEEEEEe
Confidence 32 22333332 2233444555667888986531 24566655 6679987555444
No 35
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=86.63 E-value=2.9 Score=36.94 Aligned_cols=102 Identities=11% Similarity=0.089 Sum_probs=56.1
Q ss_pred HHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc-EEE
Q 045079 408 IRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP-FEY 486 (596)
Q Consensus 408 IleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP-FeF 486 (596)
|++.+.-.+.-+|+|+|.+.|. +...|+. +..++||||.. ...++.+.++ ++..|++ .+|
T Consensus 27 ~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~-----~~~~v~~vD~~------~~~~~~a~~~----~~~~~~~~~~~ 87 (183)
T 2yxd_A 27 SIGKLNLNKDDVVVDVGCGSGG----MTVEIAK-----RCKFVYAIDYL------DGAIEVTKQN----LAKFNIKNCQI 87 (183)
T ss_dssp HHHHHCCCTTCEEEEESCCCSH----HHHHHHT-----TSSEEEEEECS------HHHHHHHHHH----HHHTTCCSEEE
T ss_pred HHHHcCCCCCCEEEEeCCCCCH----HHHHHHh-----cCCeEEEEeCC------HHHHHHHHHH----HHHcCCCcEEE
Confidence 3444444455689999999985 3344444 34699999963 2445444433 3445553 444
Q ss_pred EeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHHhhCCcEEEee
Q 045079 487 NVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHG 549 (596)
Q Consensus 487 ~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir~L~P~Vfv~~ 549 (596)
. ...+++ ...+ ..=++++.+.. + ....+|+.++++ |.-.++.
T Consensus 88 ~--~~d~~~-~~~~---~~~D~i~~~~~--------~------~~~~~l~~~~~~-~gG~l~~ 129 (183)
T 2yxd_A 88 I--KGRAED-VLDK---LEFNKAFIGGT--------K------NIEKIIEILDKK-KINHIVA 129 (183)
T ss_dssp E--ESCHHH-HGGG---CCCSEEEECSC--------S------CHHHHHHHHHHT-TCCEEEE
T ss_pred E--ECCccc-cccC---CCCcEEEECCc--------c------cHHHHHHHHhhC-CCCEEEE
Confidence 3 233332 1111 12245555433 1 246799999999 8755444
No 36
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=86.59 E-value=0.86 Score=45.84 Aligned_cols=108 Identities=15% Similarity=0.071 Sum_probs=61.3
Q ss_pred HHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--EE
Q 045079 408 IRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP--FE 485 (596)
Q Consensus 408 IleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP--Fe 485 (596)
|++.+.-....+|+|+|.+.| .+...|+++. |.+++|++|.| ..++.+.+++.+ .++. .+
T Consensus 161 ~~~~~~~~~~~~vlDvG~G~G----~~~~~l~~~~---p~~~~~~~D~~-------~~~~~a~~~~~~----~~~~~~v~ 222 (332)
T 3i53_A 161 IAAKYDWAALGHVVDVGGGSG----GLLSALLTAH---EDLSGTVLDLQ-------GPASAAHRRFLD----TGLSGRAQ 222 (332)
T ss_dssp GGGSSCCGGGSEEEEETCTTS----HHHHHHHHHC---TTCEEEEEECH-------HHHHHHHHHHHH----TTCTTTEE
T ss_pred HHHhCCCCCCCEEEEeCCChh----HHHHHHHHHC---CCCeEEEecCH-------HHHHHHHHhhhh----cCcCcCeE
Confidence 333333244579999999999 3444555443 56799999873 346655555443 3432 55
Q ss_pred EEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEe
Q 045079 486 YNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIH 548 (596)
Q Consensus 486 F~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~ 548 (596)
|.... +. +.+.. .+=+|-|...||++.|+. ...+|+.+ +.|+|.-.++
T Consensus 223 ~~~~d--~~----~~~p~---~~D~v~~~~vlh~~~~~~------~~~~l~~~~~~L~pgG~l~ 271 (332)
T 3i53_A 223 VVVGS--FF----DPLPA---GAGGYVLSAVLHDWDDLS------AVAILRRCAEAAGSGGVVL 271 (332)
T ss_dssp EEECC--TT----SCCCC---SCSEEEEESCGGGSCHHH------HHHHHHHHHHHHTTTCEEE
T ss_pred EecCC--CC----CCCCC---CCcEEEEehhhccCCHHH------HHHHHHHHHHhcCCCCEEE
Confidence 54421 21 11111 122444566788887652 35677777 5579976443
No 37
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=86.40 E-value=2.3 Score=39.60 Aligned_cols=106 Identities=16% Similarity=0.155 Sum_probs=58.8
Q ss_pred HHHHHhhhh-cCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcE
Q 045079 406 QTIRKLAEK-ATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPF 484 (596)
Q Consensus 406 qaIleA~~g-~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPF 484 (596)
+.+++.+.. .+.-+|+|+|.+.|. +...|+.+ |+ ++||||.. ...++.+.+++.. ..
T Consensus 31 ~~~~~~l~~~~~~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s------~~~~~~a~~~~~~-------~v 88 (250)
T 2p7i_A 31 PFMVRAFTPFFRPGNLLELGSFKGD----FTSRLQEH--FN---DITCVEAS------EEAISHAQGRLKD-------GI 88 (250)
T ss_dssp HHHHHHHGGGCCSSCEEEESCTTSH----HHHHHTTT--CS---CEEEEESC------HHHHHHHHHHSCS-------CE
T ss_pred HHHHHHHHhhcCCCcEEEECCCCCH----HHHHHHHh--CC---cEEEEeCC------HHHHHHHHHhhhC-------Ce
Confidence 334555542 334579999999884 44556654 33 69999973 2334433332211 33
Q ss_pred EEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHH--hhCCcEEEee
Q 045079 485 EYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIK--RINPDVFIHG 549 (596)
Q Consensus 485 eF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir--~L~P~Vfv~~ 549 (596)
+|.. ...+++ ..++.+=+|-|...|||+.|. ..+|+.++ -|+|.-.++.
T Consensus 89 ~~~~--~d~~~~------~~~~~fD~v~~~~~l~~~~~~--------~~~l~~~~~~~LkpgG~l~i 139 (250)
T 2p7i_A 89 TYIH--SRFEDA------QLPRRYDNIVLTHVLEHIDDP--------VALLKRINDDWLAEGGRLFL 139 (250)
T ss_dssp EEEE--SCGGGC------CCSSCEEEEEEESCGGGCSSH--------HHHHHHHHHTTEEEEEEEEE
T ss_pred EEEE--ccHHHc------CcCCcccEEEEhhHHHhhcCH--------HHHHHHHHHHhcCCCCEEEE
Confidence 3332 233333 122334456677788998752 46777776 5699754433
No 38
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=86.37 E-value=4.2 Score=39.13 Aligned_cols=104 Identities=16% Similarity=0.268 Sum_probs=60.2
Q ss_pred cCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc-EEEEeecccc
Q 045079 415 ATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP-FEYNVIAQKW 493 (596)
Q Consensus 415 ~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP-FeF~~Ia~~~ 493 (596)
.+.-+|+|+|.+.|. +...|+.+. |..++||||.. ...++.+.++ ++..+++ .+|.. ..+
T Consensus 36 ~~~~~vLDiG~G~G~----~~~~l~~~~---~~~~v~~vD~s------~~~~~~a~~~----~~~~~~~~~~~~~--~d~ 96 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGA----QTVILAKNN---PDAEITSIDIS------PESLEKAREN----TEKNGIKNVKFLQ--ANI 96 (276)
T ss_dssp CTTCEEEETTCTTSH----HHHHHHHHC---TTSEEEEEESC------HHHHHHHHHH----HHHTTCCSEEEEE--CCG
T ss_pred CCCCeEEEecCCCCH----HHHHHHHhC---CCCEEEEEECC------HHHHHHHHHH----HHHcCCCCcEEEE--ccc
Confidence 345689999999984 334444442 34699999973 2344444333 3444554 44432 223
Q ss_pred cccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeee
Q 045079 494 ETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGI 550 (596)
Q Consensus 494 E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e 550 (596)
+++ ....+.+=+|-|...|+|+.|. ..+|+.+ +-|+|.-+++..
T Consensus 97 ~~~-----~~~~~~fD~v~~~~~l~~~~~~--------~~~l~~~~~~L~pgG~l~~~ 141 (276)
T 3mgg_A 97 FSL-----PFEDSSFDHIFVCFVLEHLQSP--------EEALKSLKKVLKPGGTITVI 141 (276)
T ss_dssp GGC-----CSCTTCEEEEEEESCGGGCSCH--------HHHHHHHHHHEEEEEEEEEE
T ss_pred ccC-----CCCCCCeeEEEEechhhhcCCH--------HHHHHHHHHHcCCCcEEEEE
Confidence 322 2233445566677788888753 3667666 557998765543
No 39
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=86.19 E-value=2 Score=41.79 Aligned_cols=124 Identities=15% Similarity=0.177 Sum_probs=65.6
Q ss_pred HHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcC-CcE
Q 045079 406 QTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFN-VPF 484 (596)
Q Consensus 406 qaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~g-VPF 484 (596)
..|++.+......+|+|+|.+.|. +...|+.+ |+ ++||||.. ...++.+.+++.+.....+ ..+
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s------~~~l~~a~~~~~~~~~~~~~~~~ 111 (293)
T 3thr_A 47 AWLLGLLRQHGCHRVLDVACGTGV----DSIMLVEE--GF---SVTSVDAS------DKMLKYALKERWNRRKEPAFDKW 111 (293)
T ss_dssp HHHHHHHHHTTCCEEEETTCTTSH----HHHHHHHT--TC---EEEEEESC------HHHHHHHHHHHHHTTTSHHHHTC
T ss_pred HHHHHHhcccCCCEEEEecCCCCH----HHHHHHHC--CC---eEEEEECC------HHHHHHHHHhhhhccccccccee
Confidence 445555555566799999999985 33444544 33 99999973 3456555554432211111 112
Q ss_pred EEEeecccccccCcccccccCCCeEEEEee-ccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEee
Q 045079 485 EYNVIAQKWETIRLEDFKIDRDEVTVVNCV-HRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHG 549 (596)
Q Consensus 485 eF~~Ia~~~E~i~~edL~i~~dE~LaVN~~-f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~ 549 (596)
.|.. ..+.++. +++ ...+.+=+|-|. ..|+|+.+-.... .-+..+|+.+ +.|+|.-.++.
T Consensus 112 ~~~~--~d~~~~~-~~~-~~~~~fD~V~~~g~~l~~~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~~ 173 (293)
T 3thr_A 112 VIEE--ANWLTLD-KDV-PAGDGFDAVICLGNSFAHLPDSKGDQ-SEHRLALKNIASMVRPGGLLVI 173 (293)
T ss_dssp EEEE--CCGGGHH-HHS-CCTTCEEEEEECTTCGGGSCCSSSSS-HHHHHHHHHHHHTEEEEEEEEE
T ss_pred eEee--cChhhCc-ccc-ccCCCeEEEEEcChHHhhcCccccCH-HHHHHHHHHHHHHcCCCeEEEE
Confidence 2221 2232221 111 233445566666 7889998711000 1245667666 55799865543
No 40
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=86.03 E-value=6.6 Score=37.13 Aligned_cols=109 Identities=16% Similarity=0.159 Sum_probs=61.2
Q ss_pred HHHHhhhh-cCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--
Q 045079 407 TIRKLAEK-ATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP-- 483 (596)
Q Consensus 407 aIleA~~g-~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP-- 483 (596)
.+++.+.+ ...-+|+|+|.+.|.. ...|+.+.+ . ++||||.. ...++.+. +.++..|++
T Consensus 36 ~~l~~l~~~~~~~~vLDiG~G~G~~----~~~l~~~~~---~-~v~~vD~s------~~~~~~a~----~~~~~~~~~~~ 97 (257)
T 3f4k_A 36 KAVSFINELTDDAKIADIGCGTGGQ----TLFLADYVK---G-QITGIDLF------PDFIEIFN----ENAVKANCADR 97 (257)
T ss_dssp HHHTTSCCCCTTCEEEEETCTTSHH----HHHHHHHCC---S-EEEEEESC------HHHHHHHH----HHHHHTTCTTT
T ss_pred HHHHHHhcCCCCCeEEEeCCCCCHH----HHHHHHhCC---C-eEEEEECC------HHHHHHHH----HHHHHcCCCCc
Confidence 34444432 3345899999998853 334444332 2 99999973 23444443 334556765
Q ss_pred EEEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHH-hhCCcEEEee
Q 045079 484 FEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIK-RINPDVFIHG 549 (596)
Q Consensus 484 FeF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir-~L~P~Vfv~~ 549 (596)
.+|.. ..++++. ...+.+=+|-|...|||+ + ...+|+.++ -|+|.-.++.
T Consensus 98 ~~~~~--~d~~~~~-----~~~~~fD~v~~~~~l~~~-~--------~~~~l~~~~~~L~pgG~l~~ 148 (257)
T 3f4k_A 98 VKGIT--GSMDNLP-----FQNEELDLIWSEGAIYNI-G--------FERGMNEWSKYLKKGGFIAV 148 (257)
T ss_dssp EEEEE--CCTTSCS-----SCTTCEEEEEEESCSCCC-C--------HHHHHHHHHTTEEEEEEEEE
T ss_pred eEEEE--CChhhCC-----CCCCCEEEEEecChHhhc-C--------HHHHHHHHHHHcCCCcEEEE
Confidence 55533 2333332 223445555666777887 3 245677665 5799865543
No 41
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=85.98 E-value=1.5 Score=45.59 Aligned_cols=109 Identities=14% Similarity=0.246 Sum_probs=64.5
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEE
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEY 486 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF 486 (596)
.|++.+.-...-.|+|+|.+.|. ++..|+.+ | .++||||+. .. ..+.|++.|++..-
T Consensus 98 ~l~~~~~~~~~~~VLDiGcG~G~----~~~~l~~~--g---~~v~gvD~s------~~--------~~~~a~~~~~~~~~ 154 (416)
T 4e2x_A 98 DFLATELTGPDPFIVEIGCNDGI----MLRTIQEA--G---VRHLGFEPS------SG--------VAAKAREKGIRVRT 154 (416)
T ss_dssp HHHHTTTCSSSCEEEEETCTTTT----THHHHHHT--T---CEEEEECCC------HH--------HHHHHHTTTCCEEC
T ss_pred HHHHHhCCCCCCEEEEecCCCCH----HHHHHHHc--C---CcEEEECCC------HH--------HHHHHHHcCCCcce
Confidence 34455544456789999999997 45556654 2 299999973 12 23455655766532
Q ss_pred EeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeee
Q 045079 487 NVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGI 550 (596)
Q Consensus 487 ~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e 550 (596)
.. +..-..+++....+.+=+|-|...|||+.| | ..+|+.+ |-|+|.-+++.+
T Consensus 155 ~~----~~~~~~~~l~~~~~~fD~I~~~~vl~h~~d-------~-~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 155 DF----FEKATADDVRRTEGPANVIYAANTLCHIPY-------V-QSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp SC----CSHHHHHHHHHHHCCEEEEEEESCGGGCTT-------H-HHHHHHHHHHEEEEEEEEEE
T ss_pred ee----echhhHhhcccCCCCEEEEEECChHHhcCC-------H-HHHHHHHHHHcCCCeEEEEE
Confidence 11 111122223333345556667788999974 2 4667666 556998665544
No 42
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=85.87 E-value=9.9 Score=35.00 Aligned_cols=118 Identities=15% Similarity=0.320 Sum_probs=64.6
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCC------cEEEEee
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNV------PFEYNVI 489 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gV------PFeF~~I 489 (596)
+.-+|+|+|.+.|. +...|+.+ | .++||||.. ...++. ..+.++..++ ..+|..
T Consensus 30 ~~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~vD~s------~~~~~~----a~~~~~~~~~~~~~~~~~~~~~- 89 (235)
T 3sm3_A 30 EDDEILDIGCGSGK----ISLELASK--G---YSVTGIDIN------SEAIRL----AETAARSPGLNQKTGGKAEFKV- 89 (235)
T ss_dssp TTCEEEEETCTTSH----HHHHHHHT--T---CEEEEEESC------HHHHHH----HHHHTTCCSCCSSSSCEEEEEE-
T ss_pred CCCeEEEECCCCCH----HHHHHHhC--C---CeEEEEECC------HHHHHH----HHHHHHhcCCccccCcceEEEE-
Confidence 34579999999984 34445555 2 489999973 233333 2333444555 234432
Q ss_pred cccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEE-eeeecCCCCcchhHHHH
Q 045079 490 AQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFI-HGISNGTYNAPFFLARF 564 (596)
Q Consensus 490 a~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv-~~e~n~~~nsp~F~~RF 564 (596)
..++.+ ....+.+=+|-|...|+|+.+.. .+..+|+.+ +-|+|.-.+ +++.......+.+..++
T Consensus 90 -~d~~~~-----~~~~~~~D~v~~~~~l~~~~~~~-----~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~ 155 (235)
T 3sm3_A 90 -ENASSL-----SFHDSSFDFAVMQAFLTSVPDPK-----ERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRY 155 (235)
T ss_dssp -CCTTSC-----CSCTTCEEEEEEESCGGGCCCHH-----HHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHH
T ss_pred -eccccc-----CCCCCceeEEEEcchhhcCCCHH-----HHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHh
Confidence 222222 22234455555667888887631 134677776 556998654 44444444444444443
No 43
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=85.57 E-value=4.1 Score=41.75 Aligned_cols=111 Identities=10% Similarity=0.080 Sum_probs=61.1
Q ss_pred HHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--EE
Q 045079 408 IRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP--FE 485 (596)
Q Consensus 408 IleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP--Fe 485 (596)
+++.+-....-+|+|+|.+.|. +...|+++. |.+++|++|.| ..++.+.++ ++..|++ ++
T Consensus 171 ~l~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-------~~~~~a~~~----~~~~~~~~~v~ 232 (363)
T 3dp7_A 171 ALEIVFSHHPKRLLDIGGNTGK----WATQCVQYN---KEVEVTIVDLP-------QQLEMMRKQ----TAGLSGSERIH 232 (363)
T ss_dssp HHHHHGGGCCSEEEEESCTTCH----HHHHHHHHS---TTCEEEEEECH-------HHHHHHHHH----HTTCTTGGGEE
T ss_pred HHHHhcccCCCEEEEeCCCcCH----HHHHHHHhC---CCCEEEEEeCH-------HHHHHHHHH----HHhcCcccceE
Confidence 4444444556799999999985 344444442 45799999973 335544443 3444543 55
Q ss_pred EEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEe
Q 045079 486 YNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIH 548 (596)
Q Consensus 486 F~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~ 548 (596)
|.. ....+.. +.+. +.+=+|-+.+.||++.|+. ...+|+.+ +.|+|.-.++
T Consensus 233 ~~~--~d~~~~~---~~~p-~~~D~v~~~~vlh~~~~~~------~~~~l~~~~~~L~pgG~l~ 284 (363)
T 3dp7_A 233 GHG--ANLLDRD---VPFP-TGFDAVWMSQFLDCFSEEE------VISILTRVAQSIGKDSKVY 284 (363)
T ss_dssp EEE--CCCCSSS---CCCC-CCCSEEEEESCSTTSCHHH------HHHHHHHHHHHCCTTCEEE
T ss_pred EEE--ccccccC---CCCC-CCcCEEEEechhhhCCHHH------HHHHHHHHHHhcCCCcEEE
Confidence 543 2222111 0011 1222344556778887652 34678777 4579976443
No 44
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=85.38 E-value=1 Score=41.99 Aligned_cols=115 Identities=11% Similarity=0.047 Sum_probs=59.7
Q ss_pred HHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc-EEEE
Q 045079 409 RKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP-FEYN 487 (596)
Q Consensus 409 leA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP-FeF~ 487 (596)
++.+.-...-+|+|+|.+.|.- ...|+.+. |..++||||... ..++.+.++..+-++..+++ ++|.
T Consensus 20 ~~~l~~~~~~~vLDiGcG~G~~----~~~la~~~---p~~~v~gvD~s~------~~l~~~~~~a~~~~~~~~~~~v~~~ 86 (218)
T 3mq2_A 20 FEQLRSQYDDVVLDVGTGDGKH----PYKVARQN---PSRLVVALDADK------SRMEKISAKAAAKPAKGGLPNLLYL 86 (218)
T ss_dssp HHHHHTTSSEEEEEESCTTCHH----HHHHHHHC---TTEEEEEEESCG------GGGHHHHHHHTSCGGGTCCTTEEEE
T ss_pred HHHhhccCCCEEEEecCCCCHH----HHHHHHHC---CCCEEEEEECCH------HHHHHHHHHHHHhhhhcCCCceEEE
Confidence 4444456677899999998843 33344332 457999999742 33444433333333445553 4543
Q ss_pred eecccccccCcccccccCCCeEEEEe-eccc--cCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeee
Q 045079 488 VIAQKWETIRLEDFKIDRDEVTVVNC-VHRM--KNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGI 550 (596)
Q Consensus 488 ~Ia~~~E~i~~edL~i~~dE~LaVN~-~f~L--h~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e 550 (596)
. ...+++...+ ..| .+.+.. ...+ ||+.|. ..+|+.+ |-|+|.-.++..
T Consensus 87 ~--~d~~~l~~~~---~~d-~v~~~~~~~~~~~~~~~~~--------~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 87 W--ATAERLPPLS---GVG-ELHVLMPWGSLLRGVLGSS--------PEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp E--CCSTTCCSCC---CEE-EEEEESCCHHHHHHHHTSS--------SHHHHHHHHTEEEEEEEEEE
T ss_pred e--cchhhCCCCC---CCC-EEEEEccchhhhhhhhccH--------HHHHHHHHHHcCCCcEEEEE
Confidence 2 3333333211 112 233222 2222 255543 2466665 667998766553
No 45
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=84.20 E-value=5.7 Score=37.27 Aligned_cols=102 Identities=13% Similarity=0.079 Sum_probs=56.2
Q ss_pred eEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeecccccccC
Q 045079 418 LHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETIR 497 (596)
Q Consensus 418 vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E~i~ 497 (596)
-.|+|+|.+.|. +...|+. +..++||||.. ...++.+.+++...- ..-..+|.. ..+.++.
T Consensus 68 ~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~s------~~~~~~a~~~~~~~~--~~~~v~~~~--~d~~~~~ 128 (235)
T 3lcc_A 68 GRALVPGCGGGH----DVVAMAS-----PERFVVGLDIS------ESALAKANETYGSSP--KAEYFSFVK--EDVFTWR 128 (235)
T ss_dssp EEEEEETCTTCH----HHHHHCB-----TTEEEEEECSC------HHHHHHHHHHHTTSG--GGGGEEEEC--CCTTTCC
T ss_pred CCEEEeCCCCCH----HHHHHHh-----CCCeEEEEECC------HHHHHHHHHHhhccC--CCcceEEEE--CchhcCC
Confidence 499999999883 3345554 23689999973 344555544433211 111233332 2333322
Q ss_pred cccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHHh-hCCcEEEeee
Q 045079 498 LEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKR-INPDVFIHGI 550 (596)
Q Consensus 498 ~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir~-L~P~Vfv~~e 550 (596)
+. +.+=+|-|...|+|+.++ -+..+|+.+++ |+|.-.++..
T Consensus 129 ~~------~~fD~v~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~~ 170 (235)
T 3lcc_A 129 PT------ELFDLIFDYVFFCAIEPE------MRPAWAKSMYELLKPDGELITL 170 (235)
T ss_dssp CS------SCEEEEEEESSTTTSCGG------GHHHHHHHHHHHEEEEEEEEEE
T ss_pred CC------CCeeEEEEChhhhcCCHH------HHHHHHHHHHHHCCCCcEEEEE
Confidence 21 123344466778888643 24567777755 7998766543
No 46
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=84.18 E-value=3.4 Score=41.65 Aligned_cols=112 Identities=13% Similarity=0.104 Sum_probs=65.0
Q ss_pred HHHHhhhhcC-eeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--
Q 045079 407 TIRKLAEKAT-RLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP-- 483 (596)
Q Consensus 407 aIleA~~g~~-~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP-- 483 (596)
.|++.+.-.+ ..+|+|+|.+.|. +...|+.+. |.+++|++|.|. .++.+.+++. ..++.
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~-------~~~~a~~~~~----~~~~~~~ 230 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGT----YLAQVLRRH---PQLTGQIWDLPT-------TRDAARKTIH----AHDLGGR 230 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECGG-------GHHHHHHHHH----HTTCGGG
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCH----HHHHHHHhC---CCCeEEEEECHH-------HHHHHHHHHH----hcCCCCc
Confidence 5666665555 7899999999995 344444432 458999999742 3544444433 34443
Q ss_pred EEEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEe
Q 045079 484 FEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIH 548 (596)
Q Consensus 484 FeF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~ 548 (596)
++|..- .+.+... ..++.+=+|-|...|||+.|+. ...+|+.+ +.|+|.-.++
T Consensus 231 v~~~~~--d~~~~~~----~~~~~~D~v~~~~vlh~~~~~~------~~~~l~~~~~~L~pgG~l~ 284 (352)
T 3mcz_A 231 VEFFEK--NLLDARN----FEGGAADVVMLNDCLHYFDARE------AREVIGHAAGLVKPGGALL 284 (352)
T ss_dssp EEEEEC--CTTCGGG----GTTCCEEEEEEESCGGGSCHHH------HHHHHHHHHHTEEEEEEEE
T ss_pred eEEEeC--CcccCcc----cCCCCccEEEEecccccCCHHH------HHHHHHHHHHHcCCCCEEE
Confidence 444332 2221110 0122355566677889887642 35677776 5579976443
No 47
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=83.49 E-value=8.6 Score=38.05 Aligned_cols=113 Identities=14% Similarity=0.233 Sum_probs=59.7
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhh----cCCcEEEEeecc
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCER----FNVPFEYNVIAQ 491 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~----~gVPFeF~~Ia~ 491 (596)
+..+|+|+|.+.|.- ...|+.++ ..++||||.. ...++.+.+++...... ....++| +..
T Consensus 34 ~~~~VLDlGcG~G~~----~~~l~~~~----~~~v~gvD~s------~~~l~~a~~~~~~~~~~~~~~~~~~~~~--~~~ 97 (313)
T 3bgv_A 34 RDITVLDLGCGKGGD----LLKWKKGR----INKLVCTDIA------DVSVKQCQQRYEDMKNRRDSEYIFSAEF--ITA 97 (313)
T ss_dssp -CCEEEEETCTTTTT----HHHHHHTT----CSEEEEEESC------HHHHHHHHHHHHHHHSSSCC-CCCEEEE--EEC
T ss_pred CCCEEEEECCCCcHH----HHHHHhcC----CCEEEEEeCC------HHHHHHHHHHHHHhhhcccccccceEEE--EEe
Confidence 567899999998863 33344332 3589999973 35566666665543211 1112333 333
Q ss_pred cccccCcc-cccccCCCeEEEEeeccccCC-CCCCcCCCCcHHHHHHHH-HhhCCcEEEee
Q 045079 492 KWETIRLE-DFKIDRDEVTVVNCVHRMKNL-PDDTVVDSSPRDAVLDLI-KRINPDVFIHG 549 (596)
Q Consensus 492 ~~E~i~~e-dL~i~~dE~LaVN~~f~Lh~L-~Desv~~~spRd~vL~~I-r~L~P~Vfv~~ 549 (596)
.++++... .+.-..+.+=+|-|.+.||++ .+.. -...+|+.+ +.|+|+-+++.
T Consensus 98 D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~-----~~~~~l~~~~~~LkpgG~li~ 153 (313)
T 3bgv_A 98 DSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYE-----QADMMLRNACERLSPGGYFIG 153 (313)
T ss_dssp CTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHH-----HHHHHHHHHHTTEEEEEEEEE
T ss_pred cccccchhhhcccCCCCEEEEEEecchhhccCCHH-----HHHHHHHHHHHHhCCCcEEEE
Confidence 34433211 111112234455567788887 3321 124677776 55699865543
No 48
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=83.41 E-value=6.1 Score=36.93 Aligned_cols=100 Identities=12% Similarity=0.246 Sum_probs=56.2
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeecccccc
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWET 495 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E~ 495 (596)
+.-+|+|+|.+.|. +...|+.+ | .++||||.. ...++.+.++. . ....+|.. ..+++
T Consensus 53 ~~~~vLDiG~G~G~----~~~~l~~~-~----~~v~~vD~s------~~~~~~a~~~~----~--~~~~~~~~--~d~~~ 109 (242)
T 3l8d_A 53 KEAEVLDVGCGDGY----GTYKLSRT-G----YKAVGVDIS------EVMIQKGKERG----E--GPDLSFIK--GDLSS 109 (242)
T ss_dssp TTCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESC------HHHHHHHHTTT----C--BTTEEEEE--CBTTB
T ss_pred CCCeEEEEcCCCCH----HHHHHHHc-C----CeEEEEECC------HHHHHHHHhhc----c--cCCceEEE--cchhc
Confidence 44589999999884 44555655 2 389999973 23333332221 1 22344432 22222
Q ss_pred cCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeeee
Q 045079 496 IRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGIS 551 (596)
Q Consensus 496 i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e~ 551 (596)
+....+.+=+|-|...|||+.+ +. .+|+.+ +.|+|.-.++...
T Consensus 110 -----~~~~~~~fD~v~~~~~l~~~~~-------~~-~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 110 -----LPFENEQFEAIMAINSLEWTEE-------PL-RALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp -----CSSCTTCEEEEEEESCTTSSSC-------HH-HHHHHHHHHEEEEEEEEEEE
T ss_pred -----CCCCCCCccEEEEcChHhhccC-------HH-HHHHHHHHHhCCCeEEEEEE
Confidence 2233345556667788888854 33 455554 6679987555443
No 49
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=83.20 E-value=6.7 Score=38.76 Aligned_cols=108 Identities=11% Similarity=0.196 Sum_probs=58.4
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--E
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP--F 484 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP--F 484 (596)
.|++.+.-.+.-+|+|+|.+.|. +...|+.+.| .++|||+.. ...++.+.++ ++..|+. .
T Consensus 81 ~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s------~~~~~~a~~~----~~~~~~~~~v 142 (318)
T 2fk8_A 81 LNLDKLDLKPGMTLLDIGCGWGT----TMRRAVERFD----VNVIGLTLS------KNQHARCEQV----LASIDTNRSR 142 (318)
T ss_dssp HHHTTSCCCTTCEEEEESCTTSH----HHHHHHHHHC----CEEEEEESC------HHHHHHHHHH----HHTSCCSSCE
T ss_pred HHHHhcCCCCcCEEEEEcccchH----HHHHHHHHCC----CEEEEEECC------HHHHHHHHHH----HHhcCCCCce
Confidence 34444443455689999998874 3344444332 389999973 3445444333 3344554 4
Q ss_pred EEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEe
Q 045079 485 EYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIH 548 (596)
Q Consensus 485 eF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~ 548 (596)
+|. ...++++. +.+=+|-|...|+|+.++. ...+|+.+ +-|+|.-.++
T Consensus 143 ~~~--~~d~~~~~--------~~fD~v~~~~~l~~~~~~~------~~~~l~~~~~~LkpgG~l~ 191 (318)
T 2fk8_A 143 QVL--LQGWEDFA--------EPVDRIVSIEAFEHFGHEN------YDDFFKRCFNIMPADGRMT 191 (318)
T ss_dssp EEE--ESCGGGCC--------CCCSEEEEESCGGGTCGGG------HHHHHHHHHHHSCTTCEEE
T ss_pred EEE--ECChHHCC--------CCcCEEEEeChHHhcCHHH------HHHHHHHHHHhcCCCcEEE
Confidence 443 23333331 2222333456678886431 34566665 5679985443
No 50
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=83.13 E-value=1.8 Score=46.79 Aligned_cols=119 Identities=11% Similarity=0.125 Sum_probs=63.7
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHH---HHHHhhcCCc
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRL---KSYCERFNVP 483 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL---~~~A~~~gVP 483 (596)
.|++.+.-...=+|+|+|.+.|- +.-.+|.+.+ .-+++||+.. ...++-+.+.+ .+.++.+|+.
T Consensus 164 ~il~~l~l~~gd~VLDLGCGtG~----l~l~lA~~~g---~~kVvGIDiS------~~~lelAr~n~e~frkr~~~~Gl~ 230 (438)
T 3uwp_A 164 QMIDEIKMTDDDLFVDLGSGVGQ----VVLQVAAATN---CKHHYGVEKA------DIPAKYAETMDREFRKWMKWYGKK 230 (438)
T ss_dssp HHHHHHCCCTTCEEEEESCTTSH----HHHHHHHHCC---CSEEEEEECC------HHHHHHHHHHHHHHHHHHHHHTBC
T ss_pred HHHHhcCCCCCCEEEEeCCCCCH----HHHHHHHHCC---CCEEEEEeCC------HHHHHHHHHHHHHHHHHHHHhCCC
Confidence 35555544555679999999882 3333444332 2379999974 22333333333 3345666762
Q ss_pred -EEEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHHhhCCcEEEee
Q 045079 484 -FEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHG 549 (596)
Q Consensus 484 -FeF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir~L~P~Vfv~~ 549 (596)
-.+..+.....++...+ .+..-.+|++|+.+ + .. ..+..+....|.|+|.-.+++
T Consensus 231 ~~rVefi~GD~~~lp~~d-~~~~aDVVf~Nn~~-F--~p-------dl~~aL~Ei~RvLKPGGrIVs 286 (438)
T 3uwp_A 231 HAEYTLERGDFLSEEWRE-RIANTSVIFVNNFA-F--GP-------EVDHQLKERFANMKEGGRIVS 286 (438)
T ss_dssp CCEEEEEECCTTSHHHHH-HHHTCSEEEECCTT-C--CH-------HHHHHHHHHHTTSCTTCEEEE
T ss_pred CCCeEEEECcccCCcccc-ccCCccEEEEcccc-c--Cc-------hHHHHHHHHHHcCCCCcEEEE
Confidence 23333333333333221 12334588888754 1 11 234556666788999876653
No 51
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=83.06 E-value=11 Score=34.77 Aligned_cols=100 Identities=13% Similarity=0.173 Sum_probs=52.4
Q ss_pred eeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeeccccccc
Q 045079 417 RLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETI 496 (596)
Q Consensus 417 ~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E~i 496 (596)
.-+|+|+|.+.|. +...|+.+ +| ++||||.. ...++.+.+++. ..+...+|.. ..+.++
T Consensus 39 ~~~vLDlG~G~G~----~~~~l~~~--~~---~v~~vD~s------~~~~~~a~~~~~----~~~~~~~~~~--~d~~~~ 97 (227)
T 1ve3_A 39 RGKVLDLACGVGG----FSFLLEDY--GF---EVVGVDIS------EDMIRKAREYAK----SRESNVEFIV--GDARKL 97 (227)
T ss_dssp CCEEEEETCTTSH----HHHHHHHT--TC---EEEEEESC------HHHHHHHHHHHH----HTTCCCEEEE--CCTTSC
T ss_pred CCeEEEEeccCCH----HHHHHHHc--CC---EEEEEECC------HHHHHHHHHHHH----hcCCCceEEE--CchhcC
Confidence 5689999999883 34455554 33 99999973 244554444432 3333344432 223222
Q ss_pred CcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEe
Q 045079 497 RLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIH 548 (596)
Q Consensus 497 ~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~ 548 (596)
...+ ..=++|+.+..+.+++..+ + ..+|+.+ +.|+|.-.++
T Consensus 98 ~~~~---~~~D~v~~~~~~~~~~~~~-------~-~~~l~~~~~~L~~gG~l~ 139 (227)
T 1ve3_A 98 SFED---KTFDYVIFIDSIVHFEPLE-------L-NQVFKEVRRVLKPSGKFI 139 (227)
T ss_dssp CSCT---TCEEEEEEESCGGGCCHHH-------H-HHHHHHHHHHEEEEEEEE
T ss_pred CCCC---CcEEEEEEcCchHhCCHHH-------H-HHHHHHHHHHcCCCcEEE
Confidence 2110 1124555555544444432 2 3566655 5679986544
No 52
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=82.64 E-value=7.4 Score=40.18 Aligned_cols=112 Identities=12% Similarity=0.108 Sum_probs=63.8
Q ss_pred cCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhc-C----CcEEEEee
Q 045079 415 ATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERF-N----VPFEYNVI 489 (596)
Q Consensus 415 ~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~-g----VPFeF~~I 489 (596)
.+.-+|+|+|.+.|.--..|.+.+ .|..++||||.. ...++.+.+++.+.+..+ | -..+|..
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~------~~~~~v~gvD~s------~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~- 148 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLV------GEHGKVIGVDML------DNQLEVARKYVEYHAEKFFGSPSRSNVRFLK- 148 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHH------TTTCEEEEEECC------HHHHHHHHHTHHHHHHHHHSSTTCCCEEEEE-
T ss_pred CCCCEEEEecCccCHHHHHHHHHh------CCCCEEEEEECC------HHHHHHHHHHHHHhhhhcccccCCCceEEEE-
Confidence 345689999999985333333332 123599999973 456777777777776654 4 3455543
Q ss_pred cccccccCc-ccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEe
Q 045079 490 AQKWETIRL-EDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIH 548 (596)
Q Consensus 490 a~~~E~i~~-edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~ 548 (596)
..++++.. ....+..+.+=+|-|...|+|+.| + ..+|+.+ |-|+|.-.++
T Consensus 149 -~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d-------~-~~~l~~~~r~LkpgG~l~ 200 (383)
T 4fsd_A 149 -GFIENLATAEPEGVPDSSVDIVISNCVCNLSTN-------K-LALFKEIHRVLRDGGELY 200 (383)
T ss_dssp -SCTTCGGGCBSCCCCTTCEEEEEEESCGGGCSC-------H-HHHHHHHHHHEEEEEEEE
T ss_pred -ccHHHhhhcccCCCCCCCEEEEEEccchhcCCC-------H-HHHHHHHHHHcCCCCEEE
Confidence 23333210 001233333445555567777764 2 4566665 6679986444
No 53
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=82.54 E-value=4.2 Score=41.24 Aligned_cols=113 Identities=17% Similarity=0.149 Sum_probs=64.7
Q ss_pred HHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--
Q 045079 406 QTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP-- 483 (596)
Q Consensus 406 qaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP-- 483 (596)
..|++.+.-.+..+|+|+|.+.| .+...|+.+. |.+++|+||.| ..++.+.+++. ..|++
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G----~~~~~l~~~~---~~~~~~~~D~~-------~~~~~a~~~~~----~~~~~~~ 233 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNG----GMLAAIALRA---PHLRGTLVELA-------GPAERARRRFA----DAGLADR 233 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTS----HHHHHHHHHC---TTCEEEEEECH-------HHHHHHHHHHH----HTTCTTT
T ss_pred HHHHHhCCCCCCCEEEEECCCcC----HHHHHHHHHC---CCCEEEEEeCH-------HHHHHHHHHHH----hcCCCCc
Confidence 45666654455679999999999 3444455442 46899999962 34555544443 34543
Q ss_pred EEEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEE-Eeeee
Q 045079 484 FEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVF-IHGIS 551 (596)
Q Consensus 484 FeF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vf-v~~e~ 551 (596)
.+|... .+.+ .+ +..+=+|-|...|||+.|+. ...+|+.+ +.|+|.-. ++.+.
T Consensus 234 v~~~~~--d~~~----~~---~~~~D~v~~~~vl~~~~~~~------~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 234 VTVAEG--DFFK----PL---PVTADVVLLSFVLLNWSDED------ALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEEEC--CTTS----CC---SCCEEEEEEESCGGGSCHHH------HHHHHHHHHHHEEEEEEEEEEEC
T ss_pred eEEEeC--CCCC----cC---CCCCCEEEEeccccCCCHHH------HHHHHHHHHHhcCCCcEEEEEec
Confidence 555432 2211 11 11244555666788876542 23677776 55699864 44444
No 54
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=82.36 E-value=3.9 Score=40.67 Aligned_cols=114 Identities=14% Similarity=0.142 Sum_probs=66.7
Q ss_pred HHHHHhhhh--cCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc
Q 045079 406 QTIRKLAEK--ATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP 483 (596)
Q Consensus 406 qaIleA~~g--~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP 483 (596)
..|++.+.. .+..+|+|+|.+.|. +...|+.+. |..++|++|.+ ..++.+.+++.+ .|++
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-------~~~~~a~~~~~~----~~~~ 214 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGL----FGIAVAQHN---PNAEIFGVDWA-------SVLEVAKENARI----QGVA 214 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECH-------HHHHHHHHHHHH----HTCG
T ss_pred HHHHHhcccccCCCCEEEEECCCcCH----HHHHHHHHC---CCCeEEEEecH-------HHHHHHHHHHHh----cCCC
Confidence 456666654 667899999999994 334444443 45799999973 446655555543 3443
Q ss_pred --EEEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcE-EEeeee
Q 045079 484 --FEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDV-FIHGIS 551 (596)
Q Consensus 484 --FeF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~V-fv~~e~ 551 (596)
++|... .+.+. .+. +.+=+|-|...|||+.++. ...+|+.+ +.|+|.- +++.+.
T Consensus 215 ~~v~~~~~--d~~~~-----~~~-~~~D~v~~~~~l~~~~~~~------~~~~l~~~~~~L~pgG~l~i~e~ 272 (335)
T 2r3s_A 215 SRYHTIAG--SAFEV-----DYG-NDYDLVLLPNFLHHFDVAT------CEQLLRKIKTALAVEGKVIVFDF 272 (335)
T ss_dssp GGEEEEES--CTTTS-----CCC-SCEEEEEEESCGGGSCHHH------HHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cceEEEec--ccccC-----CCC-CCCcEEEEcchhccCCHHH------HHHHHHHHHHhCCCCcEEEEEee
Confidence 455432 22221 111 2244555667788886542 34677776 4569987 444444
No 55
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=81.74 E-value=2.9 Score=42.97 Aligned_cols=109 Identities=21% Similarity=0.173 Sum_probs=62.2
Q ss_pred HHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--
Q 045079 406 QTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP-- 483 (596)
Q Consensus 406 qaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP-- 483 (596)
..|++.+.-.+..+|+|+|.+.|. +...|+.+. |.+++|++|.| ..++.+.+++.+ .|+.
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-------~~~~~a~~~~~~----~~l~~~ 253 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGS----LMAAVLDAF---PGLRGTLLERP-------PVAEEARELLTG----RGLADR 253 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECH-------HHHHHHHHHHHH----TTCTTT
T ss_pred HHHHHhCCCccCcEEEEeCCCccH----HHHHHHHHC---CCCeEEEEcCH-------HHHHHHHHhhhh----cCcCCc
Confidence 456666654567899999999995 444444442 56899999973 345555555443 3432
Q ss_pred EEEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHHh-hCCcEEE
Q 045079 484 FEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKR-INPDVFI 547 (596)
Q Consensus 484 FeF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir~-L~P~Vfv 547 (596)
.+|.... +. +.+.. .-+ +|-|...||++.|+. ...+|+.+++ |+|.-.+
T Consensus 254 v~~~~~d--~~----~~~p~-~~D--~v~~~~vlh~~~d~~------~~~~L~~~~~~L~pgG~l 303 (369)
T 3gwz_A 254 CEILPGD--FF----ETIPD-GAD--VYLIKHVLHDWDDDD------VVRILRRIATAMKPDSRL 303 (369)
T ss_dssp EEEEECC--TT----TCCCS-SCS--EEEEESCGGGSCHHH------HHHHHHHHHTTCCTTCEE
T ss_pred eEEeccC--CC----CCCCC-Cce--EEEhhhhhccCCHHH------HHHHHHHHHHHcCCCCEE
Confidence 5554321 11 11111 112 344555667777642 2368888754 6887543
No 56
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=81.53 E-value=14 Score=33.79 Aligned_cols=44 Identities=23% Similarity=0.410 Sum_probs=33.0
Q ss_pred HhHHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 045079 404 ANQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELP 456 (596)
Q Consensus 404 ANqaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~p 456 (596)
....|++.+.....-+|+|+|.+.|. +...|+.+ | .++||||..
T Consensus 40 ~~~~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~vD~s 83 (227)
T 3e8s_A 40 TDQAILLAILGRQPERVLDLGCGEGW----LLRALADR--G---IEAVGVDGD 83 (227)
T ss_dssp HHHHHHHHHHHTCCSEEEEETCTTCH----HHHHHHTT--T---CEEEEEESC
T ss_pred ccHHHHHHhhcCCCCEEEEeCCCCCH----HHHHHHHC--C---CEEEEEcCC
Confidence 45667788877777899999999983 45666665 2 389999973
No 57
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=81.31 E-value=4.8 Score=38.05 Aligned_cols=107 Identities=16% Similarity=0.148 Sum_probs=59.6
Q ss_pred HHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEE
Q 045079 408 IRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYN 487 (596)
Q Consensus 408 IleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~ 487 (596)
+++.+.-...-+|+|+|.+.|.-...|.+.+ |..++||||.. ...++.+.++ .-..+|.
T Consensus 25 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-------~~~~v~~~D~s------~~~~~~a~~~--------~~~~~~~ 83 (259)
T 2p35_A 25 LLAQVPLERVLNGYDLGCGPGNSTELLTDRY-------GVNVITGIDSD------DDMLEKAADR--------LPNTNFG 83 (259)
T ss_dssp HHTTCCCSCCSSEEEETCTTTHHHHHHHHHH-------CTTSEEEEESC------HHHHHHHHHH--------STTSEEE
T ss_pred HHHhcCCCCCCEEEEecCcCCHHHHHHHHhC-------CCCEEEEEECC------HHHHHHHHHh--------CCCcEEE
Confidence 4444444455689999999987555555444 23479999973 2334433333 1123333
Q ss_pred eecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeeee
Q 045079 488 VIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGIS 551 (596)
Q Consensus 488 ~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e~ 551 (596)
. ..++++. ..+.+=+|-|...|||+.| ...+|+.+ +-|+|.-.++...
T Consensus 84 ~--~d~~~~~------~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 84 K--ADLATWK------PAQKADLLYANAVFQWVPD--------HLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp E--CCTTTCC------CSSCEEEEEEESCGGGSTT--------HHHHHHHHGGGEEEEEEEEEEE
T ss_pred E--CChhhcC------ccCCcCEEEEeCchhhCCC--------HHHHHHHHHHhcCCCeEEEEEe
Confidence 2 2233222 1233445556677888854 24566666 6679986555444
No 58
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=81.20 E-value=7.9 Score=40.10 Aligned_cols=112 Identities=16% Similarity=0.196 Sum_probs=62.2
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--E
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP--F 484 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP--F 484 (596)
+|++...-.+.-+|+|+|.+.| .+...|+.+ |. -++||||.. + .++.+ .+.++..|++ .
T Consensus 54 ~i~~~~~~~~~~~VLDlGcGtG----~ls~~la~~--g~--~~V~gvD~s-~------~~~~a----~~~~~~~~~~~~v 114 (376)
T 3r0q_C 54 AVFQNKHHFEGKTVLDVGTGSG----ILAIWSAQA--GA--RKVYAVEAT-K------MADHA----RALVKANNLDHIV 114 (376)
T ss_dssp HHHTTTTTTTTCEEEEESCTTT----HHHHHHHHT--TC--SEEEEEESS-T------THHHH----HHHHHHTTCTTTE
T ss_pred HHHhccccCCCCEEEEeccCcC----HHHHHHHhc--CC--CEEEEEccH-H------HHHHH----HHHHHHcCCCCeE
Confidence 3444333445568999999998 334445555 22 399999974 2 23332 3334555665 4
Q ss_pred EEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeee
Q 045079 485 EYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGI 550 (596)
Q Consensus 485 eF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e 550 (596)
+| +..+++++... ..=++|+.+.+ .+.+..+ .-++.+|..+ |-|+|.-+++..
T Consensus 115 ~~--~~~d~~~~~~~----~~~D~Iv~~~~--~~~l~~e-----~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 115 EV--IEGSVEDISLP----EKVDVIISEWM--GYFLLRE-----SMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp EE--EESCGGGCCCS----SCEEEEEECCC--BTTBTTT-----CTHHHHHHHHHHHEEEEEEEESS
T ss_pred EE--EECchhhcCcC----CcceEEEEcCh--hhcccch-----HHHHHHHHHHHhhCCCCeEEEEe
Confidence 44 33445554432 11234444432 2333332 2357889888 778999877543
No 59
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=81.01 E-value=3.4 Score=41.95 Aligned_cols=113 Identities=11% Similarity=-0.017 Sum_probs=64.5
Q ss_pred hHHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc-
Q 045079 405 NQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP- 483 (596)
Q Consensus 405 NqaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP- 483 (596)
.+.|++.+.-.+.-+|+|+|.+.|.-- ..|+.+. |.+++|+||.| ..++.+.+++. ..|++
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~~~----~~l~~~~---p~~~~~~~D~~-------~~~~~a~~~~~----~~~~~~ 240 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGDIS----AAMLKHF---PELDSTILNLP-------GAIDLVNENAA----EKGVAD 240 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCHHH----HHHHHHC---TTCEEEEEECG-------GGHHHHHHHHH----HTTCTT
T ss_pred HHHHHHhcCCCCCCEEEEECCcccHHH----HHHHHHC---CCCeEEEEecH-------HHHHHHHHHHH----hcCCCC
Confidence 456677665456679999999999633 3344332 46799999973 23555544443 33443
Q ss_pred -EEEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHH-hhCCcEEE-eee
Q 045079 484 -FEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIK-RINPDVFI-HGI 550 (596)
Q Consensus 484 -FeF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir-~L~P~Vfv-~~e 550 (596)
++|.. ..+.+.. +...++++ |.+.||++.|+. ...+|+.++ .|+|.-.+ +.+
T Consensus 241 ~v~~~~--~d~~~~~-----~~~~D~v~--~~~vlh~~~d~~------~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 241 RMRGIA--VDIYKES-----YPEADAVL--FCRILYSANEQL------STIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp TEEEEE--CCTTTSC-----CCCCSEEE--EESCGGGSCHHH------HHHHHHHHHTTCCTTCEEEEEE
T ss_pred CEEEEe--CccccCC-----CCCCCEEE--EechhccCCHHH------HHHHHHHHHHhcCCCCEEEEEe
Confidence 55543 2222221 22233443 456678877642 356777775 46997544 444
No 60
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=80.62 E-value=8 Score=34.32 Aligned_cols=128 Identities=9% Similarity=0.041 Sum_probs=66.1
Q ss_pred hHHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc-
Q 045079 405 NQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP- 483 (596)
Q Consensus 405 NqaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP- 483 (596)
.+.|++.+.-...-+|+|+|.+.|. +...|+.+ + .++||||.. ...++.+.+++ +..+++
T Consensus 41 ~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~~~~~-~----~~v~~~D~~------~~~~~~a~~~~----~~~~~~~ 101 (194)
T 1dus_A 41 TKILVENVVVDKDDDILDLGCGYGV----IGIALADE-V----KSTTMADIN------RRAIKLAKENI----KLNNLDN 101 (194)
T ss_dssp HHHHHHHCCCCTTCEEEEETCTTSH----HHHHHGGG-S----SEEEEEESC------HHHHHHHHHHH----HHTTCTT
T ss_pred HHHHHHHcccCCCCeEEEeCCCCCH----HHHHHHHc-C----CeEEEEECC------HHHHHHHHHHH----HHcCCCc
Confidence 3455666654566789999999883 34455555 2 489999973 23454443333 344655
Q ss_pred --EEEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeeeecCCCCcchh
Q 045079 484 --FEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGISNGTYNAPFF 560 (596)
Q Consensus 484 --FeF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e~n~~~nsp~F 560 (596)
++|.. ..+.+.. .-..=++|+.|..| |+-.+ ....+|+.+ +.|+|.-.++.........+.+
T Consensus 102 ~~~~~~~--~d~~~~~----~~~~~D~v~~~~~~--~~~~~-------~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~ 166 (194)
T 1dus_A 102 YDIRVVH--SDLYENV----KDRKYNKIITNPPI--RAGKE-------VLHRIIEEGKELLKDNGEIWVVIQTKQGAKSL 166 (194)
T ss_dssp SCEEEEE--CSTTTTC----TTSCEEEEEECCCS--TTCHH-------HHHHHHHHHHHHEEEEEEEEEEEESTHHHHHH
T ss_pred cceEEEE--Cchhccc----ccCCceEEEECCCc--ccchh-------HHHHHHHHHHHHcCCCCEEEEEECCCCChHHH
Confidence 55543 2222211 10111355555433 32111 134566655 5679987666555444333334
Q ss_pred HHHHHH
Q 045079 561 LARFRE 566 (596)
Q Consensus 561 ~~RF~E 566 (596)
...+++
T Consensus 167 ~~~l~~ 172 (194)
T 1dus_A 167 AKYMKD 172 (194)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 61
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=80.48 E-value=5.6 Score=37.00 Aligned_cols=102 Identities=11% Similarity=0.146 Sum_probs=57.2
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeecccccc
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWET 495 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E~ 495 (596)
+.-+|+|+|.+.|.- ...|+.+ | .++|||+.. ...++.+.+++. ..++..+|.. ..+++
T Consensus 37 ~~~~vLdiG~G~G~~----~~~l~~~--~---~~~~~~D~s------~~~~~~a~~~~~----~~~~~~~~~~--~d~~~ 95 (246)
T 1y8c_A 37 VFDDYLDLACGTGNL----TENLCPK--F---KNTWAVDLS------QEMLSEAENKFR----SQGLKPRLAC--QDISN 95 (246)
T ss_dssp CTTEEEEETCTTSTT----HHHHGGG--S---SEEEEECSC------HHHHHHHHHHHH----HTTCCCEEEC--CCGGG
T ss_pred CCCeEEEeCCCCCHH----HHHHHHC--C---CcEEEEECC------HHHHHHHHHHHh----hcCCCeEEEe--ccccc
Confidence 556899999999863 3345544 2 379999973 344555544443 3344344432 23333
Q ss_pred cCcccccccCCCeEEEEeec-cccCCCCCCcCCCCcHHHHHHHHH-hhCCcEEEee
Q 045079 496 IRLEDFKIDRDEVTVVNCVH-RMKNLPDDTVVDSSPRDAVLDLIK-RINPDVFIHG 549 (596)
Q Consensus 496 i~~edL~i~~dE~LaVN~~f-~Lh~L~Desv~~~spRd~vL~~Ir-~L~P~Vfv~~ 549 (596)
+. .. +.+=+|-|.. .|||+.+.. -...+|+.++ .|+|.-+++.
T Consensus 96 ~~-----~~-~~fD~v~~~~~~l~~~~~~~-----~~~~~l~~~~~~L~pgG~l~~ 140 (246)
T 1y8c_A 96 LN-----IN-RKFDLITCCLDSTNYIIDSD-----DLKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp CC-----CS-CCEEEEEECTTGGGGCCSHH-----HHHHHHHHHHTTEEEEEEEEE
T ss_pred CC-----cc-CCceEEEEcCccccccCCHH-----HHHHHHHHHHHhcCCCcEEEE
Confidence 22 11 3333444666 788886421 1346677665 4699866554
No 62
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=80.30 E-value=9.9 Score=35.38 Aligned_cols=109 Identities=12% Similarity=0.276 Sum_probs=58.7
Q ss_pred HHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEE
Q 045079 406 QTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFE 485 (596)
Q Consensus 406 qaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFe 485 (596)
..|.+.+.....-+|+|+|.+.|. +...|+.+ |. -++|||+.. ...++.+.+++. .- .++
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~--~~--~~v~~vD~s------~~~~~~a~~~~~----~~--~~~ 92 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGW----FCRWAHEH--GA--SYVLGLDLS------EKMLARARAAGP----DT--GIT 92 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCH----HHHHHHHT--TC--SEEEEEESC------HHHHHHHHHTSC----SS--SEE
T ss_pred HHHHHhccccCCCEEEEEcCcCCH----HHHHHHHC--CC--CeEEEEcCC------HHHHHHHHHhcc----cC--Cce
Confidence 456666655566789999999884 34455555 22 289999973 233443322221 11 233
Q ss_pred EEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEee
Q 045079 486 YNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHG 549 (596)
Q Consensus 486 F~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~ 549 (596)
|.. ..++++. ...+.+=+|-|...|||+.+ ...+|+.+ +.|+|.-.++.
T Consensus 93 ~~~--~d~~~~~-----~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~ 142 (243)
T 3bkw_A 93 YER--ADLDKLH-----LPQDSFDLAYSSLALHYVED--------VARLFRTVHQALSPGGHFVF 142 (243)
T ss_dssp EEE--CCGGGCC-----CCTTCEEEEEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEE
T ss_pred EEE--cChhhcc-----CCCCCceEEEEeccccccch--------HHHHHHHHHHhcCcCcEEEE
Confidence 332 2233222 22333334445567888753 24566665 56799865443
No 63
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=80.27 E-value=4.4 Score=37.32 Aligned_cols=96 Identities=18% Similarity=0.289 Sum_probs=55.9
Q ss_pred eeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeeccccccc
Q 045079 417 RLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETI 496 (596)
Q Consensus 417 ~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E~i 496 (596)
.-.|+|+|.+.|. +...|+.+ + .++||||.. ...++.+.+++ ++.|.- ..++.+
T Consensus 44 ~~~vLDiGcG~G~----~~~~l~~~-~----~~v~~vD~s------~~~~~~a~~~~-------~~~~~~----~d~~~~ 97 (211)
T 3e23_A 44 GAKILELGCGAGY----QAEAMLAA-G----FDVDATDGS------PELAAEASRRL-------GRPVRT----MLFHQL 97 (211)
T ss_dssp TCEEEESSCTTSH----HHHHHHHT-T----CEEEEEESC------HHHHHHHHHHH-------TSCCEE----CCGGGC
T ss_pred CCcEEEECCCCCH----HHHHHHHc-C----CeEEEECCC------HHHHHHHHHhc-------CCceEE----eeeccC
Confidence 4589999999885 45556655 2 489999973 23454444443 444322 222222
Q ss_pred CcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeee
Q 045079 497 RLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGI 550 (596)
Q Consensus 497 ~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e 550 (596)
. ..+.+=+|-|...|+|+.++. ...+|+.+ |.|+|.-+++..
T Consensus 98 ~------~~~~fD~v~~~~~l~~~~~~~------~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 98 D------AIDAYDAVWAHACLLHVPRDE------LADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp C------CCSCEEEEEECSCGGGSCHHH------HHHHHHHHHHHEEEEEEEEEE
T ss_pred C------CCCcEEEEEecCchhhcCHHH------HHHHHHHHHHhcCCCcEEEEE
Confidence 2 223344555677888887431 34566666 556998655443
No 64
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=80.16 E-value=1.9 Score=42.03 Aligned_cols=103 Identities=14% Similarity=0.219 Sum_probs=59.7
Q ss_pred eeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeeccccccc
Q 045079 417 RLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETI 496 (596)
Q Consensus 417 ~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E~i 496 (596)
.=+|+|+|.++| .|--.++.+ .|..+++++|.. ...++-+. +.|+..|+...+.. . ++
T Consensus 50 ~~~VLDlGCG~G----plAl~l~~~---~p~a~~~A~Di~------~~~leiar----~~~~~~g~~~~v~~-~----d~ 107 (200)
T 3fzg_A 50 VSSILDFGCGFN----PLALYQWNE---NEKIIYHAYDID------RAEIAFLS----SIIGKLKTTIKYRF-L----NK 107 (200)
T ss_dssp CSEEEEETCTTH----HHHHHHHCS---SCCCEEEEECSC------HHHHHHHH----HHHHHSCCSSEEEE-E----CC
T ss_pred CCeEEEecCCCC----HHHHHHHhc---CCCCEEEEEeCC------HHHHHHHH----HHHHhcCCCccEEE-e----cc
Confidence 348899999876 333344433 356699999984 33444433 34567788755543 1 11
Q ss_pred CcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHHhhCCcEEEeeee
Q 045079 497 RLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGIS 551 (596)
Q Consensus 497 ~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir~L~P~Vfv~~e~ 551 (596)
.+ ..-++.+=+|=..--||+| ++ .+...++.++.|+|..+++.=.
T Consensus 108 --~~-~~~~~~~DvVLa~k~LHlL-~~------~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 108 --ES-DVYKGTYDVVFLLKMLPVL-KQ------QDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp --HH-HHTTSEEEEEEEETCHHHH-HH------TTCCHHHHHHTCEEEEEEEEEE
T ss_pred --cc-cCCCCCcChhhHhhHHHhh-hh------hHHHHHHHHHHhCCCCEEEEeC
Confidence 11 1222333344444556777 44 2345778889999998877654
No 65
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=79.52 E-value=8.7 Score=39.28 Aligned_cols=121 Identities=16% Similarity=0.141 Sum_probs=64.7
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--E
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP--F 484 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP--F 484 (596)
+|++...-.+.-.|+|+|.+.|. +...|+.+ +..+++|||.. +.++.+ .+.++..|++ .
T Consensus 57 ~i~~~~~~~~~~~VLDvGcG~G~----~~~~la~~----g~~~v~gvD~s-------~~l~~a----~~~~~~~~~~~~v 117 (349)
T 3q7e_A 57 SMFHNRHLFKDKVVLDVGSGTGI----LCMFAAKA----GARKVIGIECS-------SISDYA----VKIVKANKLDHVV 117 (349)
T ss_dssp HHHTCHHHHTTCEEEEESCTTSH----HHHHHHHT----TCSEEEEEECS-------THHHHH----HHHHHHTTCTTTE
T ss_pred HHHhccccCCCCEEEEEeccchH----HHHHHHHC----CCCEEEEECcH-------HHHHHH----HHHHHHcCCCCcE
Confidence 34443333344579999999994 45556655 23599999973 134333 3334455665 4
Q ss_pred EEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeeeecCCCCcc
Q 045079 485 EYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGISNGTYNAP 558 (596)
Q Consensus 485 eF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e~n~~~nsp 558 (596)
+|. ..+++++...+ ..=++|+.+++. +++..+ ...+.+|..+ |-|+|.-.++......+-.+
T Consensus 118 ~~~--~~d~~~~~~~~---~~fD~Iis~~~~--~~l~~~-----~~~~~~l~~~~r~LkpgG~li~~~~~~~~~~ 180 (349)
T 3q7e_A 118 TII--KGKVEEVELPV---EKVDIIISEWMG--YCLFYE-----SMLNTVLHARDKWLAPDGLIFPDRATLYVTA 180 (349)
T ss_dssp EEE--ESCTTTCCCSS---SCEEEEEECCCB--BTBTBT-----CCHHHHHHHHHHHEEEEEEEESCEEEEEEEE
T ss_pred EEE--ECcHHHccCCC---CceEEEEEcccc--ccccCc-----hhHHHHHHHHHHhCCCCCEEccccceEEEee
Confidence 443 34455443221 111355544432 223222 2356788887 67899988764433333333
No 66
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=79.38 E-value=12 Score=36.93 Aligned_cols=109 Identities=12% Similarity=0.067 Sum_probs=61.7
Q ss_pred HHHHhhh-hcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--
Q 045079 407 TIRKLAE-KATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP-- 483 (596)
Q Consensus 407 aIleA~~-g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP-- 483 (596)
.|++.+. -...-+|+|+|.+.|. +...|+.+.+ .++||||.. ...++.+.+ .++..|++
T Consensus 107 ~l~~~l~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s------~~~~~~a~~----~~~~~~~~~~ 168 (312)
T 3vc1_A 107 FLMDHLGQAGPDDTLVDAGCGRGG----SMVMAHRRFG----SRVEGVTLS------AAQADFGNR----RARELRIDDH 168 (312)
T ss_dssp HHHTTSCCCCTTCEEEEESCTTSH----HHHHHHHHHC----CEEEEEESC------HHHHHHHHH----HHHHTTCTTT
T ss_pred HHHHHhccCCCCCEEEEecCCCCH----HHHHHHHHcC----CEEEEEeCC------HHHHHHHHH----HHHHcCCCCc
Confidence 3555554 3445689999999884 3344444432 589999973 344544433 34455665
Q ss_pred EEEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEee
Q 045079 484 FEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHG 549 (596)
Q Consensus 484 FeF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~ 549 (596)
.+|.. ..++++. ...+.+=+|-|...|+|+ + ...+|+.+ |-|+|.-.++.
T Consensus 169 v~~~~--~d~~~~~-----~~~~~fD~V~~~~~l~~~-~--------~~~~l~~~~~~LkpgG~l~~ 219 (312)
T 3vc1_A 169 VRSRV--CNMLDTP-----FDKGAVTASWNNESTMYV-D--------LHDLFSEHSRFLKVGGRYVT 219 (312)
T ss_dssp EEEEE--CCTTSCC-----CCTTCEEEEEEESCGGGS-C--------HHHHHHHHHHHEEEEEEEEE
T ss_pred eEEEE--CChhcCC-----CCCCCEeEEEECCchhhC-C--------HHHHHHHHHHHcCCCcEEEE
Confidence 55543 2333332 223444455566777777 3 34566655 66799865543
No 67
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=79.26 E-value=14 Score=37.72 Aligned_cols=132 Identities=15% Similarity=0.192 Sum_probs=74.1
Q ss_pred HHHhhhhcCeeEEEEceeccccchHHHHHHHhcC-CCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEE
Q 045079 408 IRKLAEKATRLHIIDFGICYGFQWPCLIQILSSR-PTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEY 486 (596)
Q Consensus 408 IleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R-~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF 486 (596)
|++.+.. --.|+|+|.+.|. ||.- -..+|..+++++|.. ...++ .+.+++..+|+++.|
T Consensus 126 i~~~i~~--p~~VLDLGCG~Gp--------LAl~~~~~~p~a~y~a~DId------~~~le----~a~~~l~~~g~~~~~ 185 (281)
T 3lcv_B 126 LFRHLPR--PNTLRDLACGLNP--------LAAPWMGLPAETVYIASDID------ARLVG----FVDEALTRLNVPHRT 185 (281)
T ss_dssp HGGGSCC--CSEEEETTCTTGG--------GCCTTTTCCTTCEEEEEESB------HHHHH----HHHHHHHHTTCCEEE
T ss_pred HHhccCC--CceeeeeccCccH--------HHHHHHhhCCCCEEEEEeCC------HHHHH----HHHHHHHhcCCCceE
Confidence 4444422 4488999998872 2211 123478999999984 23343 445566778999887
Q ss_pred EeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHHhhCCcEEEeeeecCCCCcchhHHHHHH
Q 045079 487 NVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGISNGTYNAPFFLARFRE 566 (596)
Q Consensus 487 ~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir~L~P~Vfv~~e~n~~~nsp~F~~RF~E 566 (596)
... ++....+. .+..+++++ -.+|+|-++. +...++.+..|+|..+++.=.--+.+ .|=..
T Consensus 186 ~v~-----D~~~~~p~-~~~DvaL~l--kti~~Le~q~------kg~g~~ll~aL~~~~vvVSfp~ksl~-----Grs~g 246 (281)
T 3lcv_B 186 NVA-----DLLEDRLD-EPADVTLLL--KTLPCLETQQ------RGSGWEVIDIVNSPNIVVTFPTKSLG-----QRSKG 246 (281)
T ss_dssp EEC-----CTTTSCCC-SCCSEEEET--TCHHHHHHHS------TTHHHHHHHHSSCSEEEEEEECC------------C
T ss_pred EEe-----eecccCCC-CCcchHHHH--HHHHHhhhhh------hHHHHHHHHHhCCCCEEEeccchhhc-----CCCcc
Confidence 432 22222222 223455454 4456666552 44667999999999888754432222 12222
Q ss_pred HHHHHHHHhhhh
Q 045079 567 ALFHFSAMFDIF 578 (596)
Q Consensus 567 AL~~YSAlFDsL 578 (596)
--..|+..|+.+
T Consensus 247 m~~~Y~~~~e~~ 258 (281)
T 3lcv_B 247 MFQNYSQSFESQ 258 (281)
T ss_dssp HHHHHHHHHHHH
T ss_pred hhhHHHHHHHHH
Confidence 234677777764
No 68
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=78.54 E-value=16 Score=33.96 Aligned_cols=99 Identities=16% Similarity=0.247 Sum_probs=54.7
Q ss_pred eEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeecccccccC
Q 045079 418 LHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETIR 497 (596)
Q Consensus 418 vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E~i~ 497 (596)
-+|+|+|.+.|. +...|+.+ .++||||.. ...++.+.+++. ..+...+|.. ..+.++.
T Consensus 35 ~~vLdiG~G~G~----~~~~l~~~------~~v~~vD~s------~~~~~~a~~~~~----~~~~~~~~~~--~d~~~~~ 92 (243)
T 3d2l_A 35 KRIADIGCGTGT----ATLLLADH------YEVTGVDLS------EEMLEIAQEKAM----ETNRHVDFWV--QDMRELE 92 (243)
T ss_dssp CEEEEESCTTCH----HHHHHTTT------SEEEEEESC------HHHHHHHHHHHH----HTTCCCEEEE--CCGGGCC
T ss_pred CeEEEecCCCCH----HHHHHhhC------CeEEEEECC------HHHHHHHHHhhh----hcCCceEEEE--cChhhcC
Confidence 579999999884 44456654 489999973 344555444433 2344444433 2222222
Q ss_pred cccccccCCCeEEEEeec-cccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEee
Q 045079 498 LEDFKIDRDEVTVVNCVH-RMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHG 549 (596)
Q Consensus 498 ~edL~i~~dE~LaVN~~f-~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~ 549 (596)
.. +.+=+|-|.+ .++|+.+.. ....+|+.+ +-|+|.-.++.
T Consensus 93 -----~~-~~fD~v~~~~~~~~~~~~~~-----~~~~~l~~~~~~L~pgG~l~~ 135 (243)
T 3d2l_A 93 -----LP-EPVDAITILCDSLNYLQTEA-----DVKQTFDSAARLLTDGGKLLF 135 (243)
T ss_dssp -----CS-SCEEEEEECTTGGGGCCSHH-----HHHHHHHHHHHHEEEEEEEEE
T ss_pred -----CC-CCcCEEEEeCCchhhcCCHH-----HHHHHHHHHHHhcCCCeEEEE
Confidence 11 2233333444 678875421 134566665 55799876654
No 69
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=78.50 E-value=10 Score=35.80 Aligned_cols=104 Identities=13% Similarity=0.087 Sum_probs=57.0
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeecccccc
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWET 495 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E~ 495 (596)
+.-.|+|+|.+.|. +...|+.+. ..++||||.. ...++.+.+++...- +...+|.. ..+++
T Consensus 79 ~~~~vLDiGcG~G~----~~~~l~~~~----~~~v~~vD~s------~~~~~~a~~~~~~~~---~~~~~~~~--~d~~~ 139 (241)
T 2ex4_A 79 GTSCALDCGAGIGR----ITKRLLLPL----FREVDMVDIT------EDFLVQAKTYLGEEG---KRVRNYFC--CGLQD 139 (241)
T ss_dssp CCSEEEEETCTTTH----HHHHTTTTT----CSEEEEEESC------HHHHHHHHHHTGGGG---GGEEEEEE--CCGGG
T ss_pred CCCEEEEECCCCCH----HHHHHHHhc----CCEEEEEeCC------HHHHHHHHHHhhhcC---CceEEEEE--cChhh
Confidence 46789999999884 444555543 2489999973 244554444332210 12233332 23333
Q ss_pred cCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEee
Q 045079 496 IRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHG 549 (596)
Q Consensus 496 i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~ 549 (596)
+. ...+.+=+|-|.+.|+|+.+.. +..+|+.+ +.|+|.-.++.
T Consensus 140 ~~-----~~~~~fD~v~~~~~l~~~~~~~------~~~~l~~~~~~LkpgG~l~i 183 (241)
T 2ex4_A 140 FT-----PEPDSYDVIWIQWVIGHLTDQH------LAEFLRRCKGSLRPNGIIVI 183 (241)
T ss_dssp CC-----CCSSCEEEEEEESCGGGSCHHH------HHHHHHHHHHHEEEEEEEEE
T ss_pred cC-----CCCCCEEEEEEcchhhhCCHHH------HHHHHHHHHHhcCCCeEEEE
Confidence 32 2223333444557788887531 34667666 55799865544
No 70
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=78.46 E-value=11 Score=39.18 Aligned_cols=128 Identities=9% Similarity=0.044 Sum_probs=65.8
Q ss_pred HhHHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc
Q 045079 404 ANQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP 483 (596)
Q Consensus 404 ANqaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP 483 (596)
..+.+++.+.....-+|+|+|.+.|. +...|+.+. |..++||||.. ...++.+.+++...--.-.+.
T Consensus 210 ~~~~ll~~l~~~~~~~VLDlGcG~G~----~s~~la~~~---p~~~V~gvD~s------~~al~~Ar~n~~~ngl~~~~~ 276 (375)
T 4dcm_A 210 GARFFMQHLPENLEGEIVDLGCGNGV----IGLTLLDKN---PQAKVVFVDES------PMAVASSRLNVETNMPEALDR 276 (375)
T ss_dssp HHHHHHHTCCCSCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEESC------HHHHHHHHHHHHHHCGGGGGG
T ss_pred HHHHHHHhCcccCCCeEEEEeCcchH----HHHHHHHHC---CCCEEEEEECc------HHHHHHHHHHHHHcCCCcCce
Confidence 34456777765555789999999994 333444432 44699999973 345555555443321111123
Q ss_pred EEEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHH-hhCCcEEEeeeecCCC
Q 045079 484 FEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIK-RINPDVFIHGISNGTY 555 (596)
Q Consensus 484 FeF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir-~L~P~Vfv~~e~n~~~ 555 (596)
++|.. ..+.+ .+.-..=++|+.|-.|.-..-... .-...+|..++ .|+|.-.++.+.+...
T Consensus 277 v~~~~--~D~~~----~~~~~~fD~Ii~nppfh~~~~~~~-----~~~~~~l~~~~~~LkpgG~l~iv~n~~~ 338 (375)
T 4dcm_A 277 CEFMI--NNALS----GVEPFRFNAVLCNPPFHQQHALTD-----NVAWEMFHHARRCLKINGELYIVANRHL 338 (375)
T ss_dssp EEEEE--CSTTT----TCCTTCEEEEEECCCC-------C-----CHHHHHHHHHHHHEEEEEEEEEEEETTS
T ss_pred EEEEe--chhhc----cCCCCCeeEEEECCCcccCcccCH-----HHHHHHHHHHHHhCCCCcEEEEEEECCc
Confidence 55543 22211 111111246676766532211211 12335676664 5799987777665443
No 71
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=78.33 E-value=3.9 Score=40.85 Aligned_cols=111 Identities=12% Similarity=0.070 Sum_probs=59.2
Q ss_pred HHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEE
Q 045079 406 QTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFE 485 (596)
Q Consensus 406 qaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFe 485 (596)
..|++.+.-.. .+|+|+|.+.|. +...|+.+. |.+++|++|.|. .++.+.+++.+..-. -.++
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~-------~~~~a~~~~~~~~~~--~~v~ 220 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGGSGE----LTKAILQAE---PSARGVMLDREG-------SLGVARDNLSSLLAG--ERVS 220 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECTT-------CTHHHHHHTHHHHHT--TSEE
T ss_pred HHHHHhCCCCC-CEEEEeCCCchH----HHHHHHHHC---CCCEEEEeCcHH-------HHHHHHHHHhhcCCC--CcEE
Confidence 45556553233 799999999994 334444432 457999999832 144444444433211 1244
Q ss_pred EEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEe
Q 045079 486 YNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIH 548 (596)
Q Consensus 486 F~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~ 548 (596)
|.. ..+.+ .+. ..-++ |-|...|||+.++. ...+|+.+ +.|+|.-.++
T Consensus 221 ~~~--~d~~~----~~~-~~~D~--v~~~~vl~~~~~~~------~~~~l~~~~~~L~pgG~l~ 269 (334)
T 2ip2_A 221 LVG--GDMLQ----EVP-SNGDI--YLLSRIIGDLDEAA------SLRLLGNCREAMAGDGRVV 269 (334)
T ss_dssp EEE--SCTTT----CCC-SSCSE--EEEESCGGGCCHHH------HHHHHHHHHHHSCTTCEEE
T ss_pred Eec--CCCCC----CCC-CCCCE--EEEchhccCCCHHH------HHHHHHHHHHhcCCCCEEE
Confidence 433 22221 111 11133 33556678776542 34677777 4569976443
No 72
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=78.15 E-value=3.3 Score=40.73 Aligned_cols=114 Identities=10% Similarity=0.087 Sum_probs=58.2
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEE
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEY 486 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF 486 (596)
.+++.+..... .|+|+|.+.|. +...|+.+ | .++||||.. ...++.+.+++......+...++|
T Consensus 74 ~~~~~~~~~~~-~vLDlGcG~G~----~~~~l~~~-~----~~v~gvD~s------~~~~~~a~~~~~~~~~~~~~~v~~ 137 (299)
T 3g2m_A 74 EFATRTGPVSG-PVLELAAGMGR----LTFPFLDL-G----WEVTALELS------TSVLAAFRKRLAEAPADVRDRCTL 137 (299)
T ss_dssp HHHHHHCCCCS-CEEEETCTTTT----THHHHHTT-T----CCEEEEESC------HHHHHHHHHHHHTSCHHHHTTEEE
T ss_pred HHHHhhCCCCC-cEEEEeccCCH----HHHHHHHc-C----CeEEEEECC------HHHHHHHHHHHhhcccccccceEE
Confidence 34444443333 89999999996 34455555 2 479999973 344555544443221111123444
Q ss_pred EeecccccccCcccccccCCCeEEEEee-ccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeee
Q 045079 487 NVIAQKWETIRLEDFKIDRDEVTVVNCV-HRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGI 550 (596)
Q Consensus 487 ~~Ia~~~E~i~~edL~i~~dE~LaVN~~-f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e 550 (596)
.. ..++++. . ++.+=+|-|. ..+|++.++ -+..+|+.| +.|+|.-.++..
T Consensus 138 ~~--~d~~~~~-----~-~~~fD~v~~~~~~~~~~~~~------~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 138 VQ--GDMSAFA-----L-DKRFGTVVISSGSINELDEA------DRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp EE--CBTTBCC-----C-SCCEEEEEECHHHHTTSCHH------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred Ee--CchhcCC-----c-CCCcCEEEECCcccccCCHH------HHHHHHHHHHHHcCCCcEEEEE
Confidence 33 2333322 2 2333333333 334544321 145677776 556998655443
No 73
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=77.61 E-value=8.2 Score=39.42 Aligned_cols=112 Identities=14% Similarity=0.136 Sum_probs=60.9
Q ss_pred HHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--
Q 045079 406 QTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP-- 483 (596)
Q Consensus 406 qaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP-- 483 (596)
++|++.+...+.-+|+|+|.+.|. |...++++. ..++|||+.. +.++.+. +.++..|++
T Consensus 40 ~~i~~~l~~~~~~~VLDiGcGtG~----ls~~la~~g----~~~V~~vD~s-------~~~~~a~----~~~~~~~l~~~ 100 (348)
T 2y1w_A 40 RAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQAG----ARKIYAVEAS-------TMAQHAE----VLVKSNNLTDR 100 (348)
T ss_dssp HHHHHTGGGTTTCEEEEETCTTSH----HHHHHHHTT----CSEEEEEECS-------THHHHHH----HHHHHTTCTTT
T ss_pred HHHHhccccCCcCEEEEcCCCccH----HHHHHHhCC----CCEEEEECCH-------HHHHHHH----HHHHHcCCCCc
Confidence 567777665566799999998874 445566542 2599999973 1233222 223344543
Q ss_pred EEEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHHhhCCcEEEee
Q 045079 484 FEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHG 549 (596)
Q Consensus 484 FeF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir~L~P~Vfv~~ 549 (596)
.++ +..+++++... ..=++|+.+. -++|+..+. ..+.+...-+-|+|+-.++.
T Consensus 101 v~~--~~~d~~~~~~~----~~~D~Ivs~~--~~~~~~~~~-----~~~~l~~~~~~LkpgG~li~ 153 (348)
T 2y1w_A 101 IVV--IPGKVEEVSLP----EQVDIIISEP--MGYMLFNER-----MLESYLHAKKYLKPSGNMFP 153 (348)
T ss_dssp EEE--EESCTTTCCCS----SCEEEEEECC--CBTTBTTTS-----HHHHHHHGGGGEEEEEEEES
T ss_pred EEE--EEcchhhCCCC----CceeEEEEeC--chhcCChHH-----HHHHHHHHHhhcCCCeEEEE
Confidence 433 33444444321 1112444333 355665442 23445555567799977653
No 74
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=77.16 E-value=2.7 Score=43.15 Aligned_cols=113 Identities=14% Similarity=0.145 Sum_probs=63.7
Q ss_pred hHHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc-
Q 045079 405 NQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP- 483 (596)
Q Consensus 405 NqaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP- 483 (596)
.+.|+++..-...-+|+|+|-+.|. ++..|+++. |.+|+|..+.| +.++.+.+++. .-+.+
T Consensus 168 ~~~~~~~~~~~~~~~v~DvGgG~G~----~~~~l~~~~---p~~~~~~~dlp-------~v~~~a~~~~~----~~~~~r 229 (353)
T 4a6d_A 168 GRSVLTAFDLSVFPLMCDLGGGAGA----LAKECMSLY---PGCKITVFDIP-------EVVWTAKQHFS----FQEEEQ 229 (353)
T ss_dssp HHHHHHSSCGGGCSEEEEETCTTSH----HHHHHHHHC---SSCEEEEEECH-------HHHHHHHHHSC----C--CCS
T ss_pred HHHHHHhcCcccCCeEEeeCCCCCH----HHHHHHHhC---CCceeEeccCH-------HHHHHHHHhhh----hcccCc
Confidence 4567777654555689999999994 555666554 67899999975 33444433321 11111
Q ss_pred EEEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcE-EEeee
Q 045079 484 FEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDV-FIHGI 550 (596)
Q Consensus 484 FeF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~V-fv~~e 550 (596)
.+|.+ ...-+ + .+.... +|-+..-||+..|+. ...+|+.| +.|+|.- +++++
T Consensus 230 v~~~~--gD~~~----~-~~~~~D--~~~~~~vlh~~~d~~------~~~iL~~~~~al~pgg~lli~e 283 (353)
T 4a6d_A 230 IDFQE--GDFFK----D-PLPEAD--LYILARVLHDWADGK------CSHLLERIYHTCKPGGGILVIE 283 (353)
T ss_dssp EEEEE--SCTTT----S-CCCCCS--EEEEESSGGGSCHHH------HHHHHHHHHHHCCTTCEEEEEE
T ss_pred eeeec--Ccccc----C-CCCCce--EEEeeeecccCCHHH------HHHHHHHHHhhCCCCCEEEEEE
Confidence 44432 11100 1 111223 444556788888763 24678877 4589975 33333
No 75
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=77.15 E-value=21 Score=36.19 Aligned_cols=150 Identities=14% Similarity=0.111 Sum_probs=78.7
Q ss_pred HHHHHHhhcccchhhhHHHHhHHHHHhh----hhc-CeeEEEEceecccc--chHHHHHHHhcCCCCCCeEEEEeecCCC
Q 045079 385 KAYQMSLSAWPFIRMSYLFANQTIRKLA----EKA-TRLHIIDFGICYGF--QWPCLIQILSSRPTGPPMLRITGIELPQ 457 (596)
Q Consensus 385 kAy~lf~~~~Pf~kfa~~~ANqaIleA~----~g~-~~vHIIDfgI~~G~--QWp~Liq~LA~R~gGPP~LRITgI~~pq 457 (596)
.+-..+.++.|-..- ..-+|.+.+.-+ .+. ..=+|+|+|.+.|. .--.+.|.++ |..|||+||..
T Consensus 43 ~~~~~~~~~~P~~~~-~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~------P~arVv~VD~s- 114 (277)
T 3giw_A 43 EAGDAMSREWPALPV-HMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVA------PESRVVYVDND- 114 (277)
T ss_dssp HHHHHHHHHCTTHHH-HHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHC------TTCEEEEEECC-
T ss_pred HHHHHHHHhCCCHHH-HHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHC------CCCEEEEEeCC-
Confidence 445566778887642 234677666543 222 23479999998643 2223333332 45799999973
Q ss_pred CCCCChHHHHHHHHHHHHHHhhcCCcEEEEeec-cccccc-Ccc--cccccCCCeEEEEeeccccCCCCCCcCCCCcHHH
Q 045079 458 PGFRPAERVEETGNRLKSYCERFNVPFEYNVIA-QKWETI-RLE--DFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDA 533 (596)
Q Consensus 458 ~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia-~~~E~i-~~e--dL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~ 533 (596)
..-|+....+|... -.-..+|...- ..++.+ ... .=.++.++.++|-+...||||.|+. .|...
T Consensus 115 -----p~mLa~Ar~~l~~~---~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~----~p~~~ 182 (277)
T 3giw_A 115 -----PIVLTLSQGLLAST---PEGRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDED----DAVGI 182 (277)
T ss_dssp -----HHHHHTTHHHHCCC---SSSEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGG----CHHHH
T ss_pred -----hHHHHHHHHHhccC---CCCcEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchh----hHHHH
Confidence 24455554444321 01124443321 222211 000 0013345555666788899999862 24444
Q ss_pred HHHHHHhhCCcE-EEeeeecCC
Q 045079 534 VLDLIKRINPDV-FIHGISNGT 554 (596)
Q Consensus 534 vL~~Ir~L~P~V-fv~~e~n~~ 554 (596)
|=+..+.|+|.- +++.....+
T Consensus 183 l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 183 VRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp HHHHHTTSCTTCEEEEEEECCT
T ss_pred HHHHHHhCCCCcEEEEEeccCC
Confidence 445567789975 455444333
No 76
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=76.14 E-value=17 Score=32.04 Aligned_cols=60 Identities=15% Similarity=0.094 Sum_probs=37.4
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP 483 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP 483 (596)
.+++.+.-...-+|+|+|.+.| .+...|+.+. |..++||||.. ...++.+.++ ++..|++
T Consensus 16 ~~~~~~~~~~~~~vldiG~G~G----~~~~~l~~~~---~~~~v~~vD~~------~~~~~~a~~~----~~~~~~~ 75 (178)
T 3hm2_A 16 LAISALAPKPHETLWDIGGGSG----SIAIEWLRST---PQTTAVCFEIS------EERRERILSN----AINLGVS 75 (178)
T ss_dssp HHHHHHCCCTTEEEEEESTTTT----HHHHHHHTTS---SSEEEEEECSC------HHHHHHHHHH----HHTTTCT
T ss_pred HHHHHhcccCCCeEEEeCCCCC----HHHHHHHHHC---CCCeEEEEeCC------HHHHHHHHHH----HHHhCCC
Confidence 3455555456678999999887 3444555553 45899999973 2445544443 3455665
No 77
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=75.84 E-value=5.8 Score=43.54 Aligned_cols=113 Identities=17% Similarity=0.251 Sum_probs=65.8
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcC-CcEEEEeeccccc
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFN-VPFEYNVIAQKWE 494 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~g-VPFeF~~Ia~~~E 494 (596)
+.+.|+|.|.+-|+ |-..||.+ | -++||||.. ...|+.+ + ..|+.-| +..+|.... .|
T Consensus 66 ~~~~vLDvGCG~G~----~~~~la~~-g----a~V~giD~~------~~~i~~a-~---~~a~~~~~~~~~~~~~~--~~ 124 (569)
T 4azs_A 66 RPLNVLDLGCAQGF----FSLSLASK-G----ATIVGIDFQ------QENINVC-R---ALAEENPDFAAEFRVGR--IE 124 (569)
T ss_dssp SCCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESC------HHHHHHH-H---HHHHTSTTSEEEEEECC--HH
T ss_pred CCCeEEEECCCCcH----HHHHHHhC-C----CEEEEECCC------HHHHHHH-H---HHHHhcCCCceEEEECC--HH
Confidence 45899999999885 66778865 3 379999973 2334332 2 2344445 667776532 23
Q ss_pred ccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHHhhCCcEEEeeeecCCC
Q 045079 495 TIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGISNGTY 555 (596)
Q Consensus 495 ~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir~L~P~Vfv~~e~n~~~ 555 (596)
++.. ...++..=||-|+=-|+|+.|..... ..-.|++.|++ +|+.+++++..+.|
T Consensus 125 ~~~~---~~~~~~fD~v~~~e~~ehv~~~~~~~--~~~~~~~tl~~-~~~~~~~~~~~~e~ 179 (569)
T 4azs_A 125 EVIA---ALEEGEFDLAIGLSVFHHIVHLHGID--EVKRLLSRLAD-VTQAVILELAVKEE 179 (569)
T ss_dssp HHHH---HCCTTSCSEEEEESCHHHHHHHHCHH--HHHHHHHHHHH-HSSEEEEECCCTTS
T ss_pred HHhh---hccCCCccEEEECcchhcCCCHHHHH--HHHHHHHHhcc-ccceeeEEeccccc
Confidence 3211 12334555788888999998642110 11235555543 35667776665544
No 78
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=75.76 E-value=11 Score=34.39 Aligned_cols=104 Identities=11% Similarity=0.143 Sum_probs=55.2
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeecccccc
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWET 495 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E~ 495 (596)
..-+|+|+|.+.|.-...++. . ++ .++||||.. ...++.+.+++.+ .+..++|.. ..+++
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~---~-~~----~~v~~vD~s------~~~~~~a~~~~~~----~~~~~~~~~--~d~~~ 82 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFV---E-DG----YKTYGIEIS------DLQLKKAENFSRE----NNFKLNISK--GDIRK 82 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHH---H-TT----CEEEEEECC------HHHHHHHHHHHHH----HTCCCCEEE--CCTTS
T ss_pred CCCEEEEECCCCCHHHHHHHH---h-CC----CEEEEEECC------HHHHHHHHHHHHh----cCCceEEEE--Cchhh
Confidence 346899999998865444432 2 22 489999973 3445555444433 233333322 22332
Q ss_pred cCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeee
Q 045079 496 IRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGI 550 (596)
Q Consensus 496 i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e 550 (596)
+ ...++.+=+|-|...++|+..+ ....+|+.+ +.|+|.-.++..
T Consensus 83 ~-----~~~~~~fD~v~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~~ 127 (209)
T 2p8j_A 83 L-----PFKDESMSFVYSYGTIFHMRKN------DVKEAIDEIKRVLKPGGLACIN 127 (209)
T ss_dssp C-----CSCTTCEEEEEECSCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred C-----CCCCCceeEEEEcChHHhCCHH------HHHHHHHHHHHHcCCCcEEEEE
Confidence 2 2223333344455677887422 134566655 667998655433
No 79
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=75.24 E-value=48 Score=30.06 Aligned_cols=100 Identities=15% Similarity=0.097 Sum_probs=54.8
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeecccccc
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWET 495 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E~ 495 (596)
+.-+|+|+|.+.|. +...|+.+ |+ -++||||.. ...++.+.+ -++..|+..+|. ...+++
T Consensus 49 ~~~~vlD~g~G~G~----~~~~l~~~--~~--~~v~~vD~~------~~~~~~a~~----~~~~~~~~~~~~--~~d~~~ 108 (207)
T 1wy7_A 49 EGKVVADLGAGTGV----LSYGALLL--GA--KEVICVEVD------KEAVDVLIE----NLGEFKGKFKVF--IGDVSE 108 (207)
T ss_dssp TTCEEEEETCTTCH----HHHHHHHT--TC--SEEEEEESC------HHHHHHHHH----HTGGGTTSEEEE--ESCGGG
T ss_pred CcCEEEEeeCCCCH----HHHHHHHc--CC--CEEEEEECC------HHHHHHHHH----HHHHcCCCEEEE--ECchHH
Confidence 44589999999986 44445555 22 289999973 233443333 344556644443 333443
Q ss_pred cCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHHhhCCcEEEee
Q 045079 496 IRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHG 549 (596)
Q Consensus 496 i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir~L~P~Vfv~~ 549 (596)
+. ..=++|+.|..|.... . .....+|+.+.++--.+++++
T Consensus 109 ~~------~~~D~v~~~~p~~~~~--~------~~~~~~l~~~~~~l~~~~~~~ 148 (207)
T 1wy7_A 109 FN------SRVDIVIMNPPFGSQR--K------HADRPFLLKAFEISDVVYSIH 148 (207)
T ss_dssp CC------CCCSEEEECCCCSSSS--T------TTTHHHHHHHHHHCSEEEEEE
T ss_pred cC------CCCCEEEEcCCCcccc--C------CchHHHHHHHHHhcCcEEEEE
Confidence 32 1235788887764322 1 123467777766654444443
No 80
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=75.05 E-value=3.6 Score=38.93 Aligned_cols=95 Identities=15% Similarity=0.291 Sum_probs=50.1
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeecccccc
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWET 495 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E~ 495 (596)
..-+|+|+|.+.|. +...|+.+ | .++|||+.. ...++ .|+.. ++|. ....++
T Consensus 41 ~~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s------~~~~~--------~a~~~---~~~~--~~d~~~ 92 (240)
T 3dli_A 41 GCRRVLDIGCGRGE----FLELCKEE--G---IESIGVDIN------EDMIK--------FCEGK---FNVV--KSDAIE 92 (240)
T ss_dssp TCSCEEEETCTTTH----HHHHHHHH--T---CCEEEECSC------HHHHH--------HHHTT---SEEE--CSCHHH
T ss_pred CCCeEEEEeCCCCH----HHHHHHhC--C---CcEEEEECC------HHHHH--------HHHhh---ccee--eccHHH
Confidence 34689999998875 34455554 2 368999973 23333 33332 2332 222221
Q ss_pred cCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEE
Q 045079 496 IRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFI 547 (596)
Q Consensus 496 i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv 547 (596)
.. . .+..+.+=+|-|...|+|+.++. ...+|+.+ |-|+|.-.+
T Consensus 93 ~~-~--~~~~~~fD~i~~~~~l~~~~~~~------~~~~l~~~~~~LkpgG~l 136 (240)
T 3dli_A 93 YL-K--SLPDKYLDGVMISHFVEHLDPER------LFELLSLCYSKMKYSSYI 136 (240)
T ss_dssp HH-H--TSCTTCBSEEEEESCGGGSCGGG------HHHHHHHHHHHBCTTCCE
T ss_pred Hh-h--hcCCCCeeEEEECCchhhCCcHH------HHHHHHHHHHHcCCCcEE
Confidence 10 0 11223233444567788887532 35677766 567997443
No 81
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=75.02 E-value=5.1 Score=40.05 Aligned_cols=42 Identities=17% Similarity=0.143 Sum_probs=28.9
Q ss_pred HHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 045079 406 QTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELP 456 (596)
Q Consensus 406 qaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~p 456 (596)
..|++.+.-...-+|+|+|.+.|. +...|+.+ | -++||||..
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~----~a~~La~~-g----~~V~gvD~S 76 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRF----LIEKALER-G----ASVTVFDFS 76 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHH----HHHHHHHT-T----CEEEEEESC
T ss_pred HHHHHhcCCCCcCEEEEEeCcchH----HHHHHHhc-C----CEEEEEECC
Confidence 345566654556799999999885 44556655 2 379999973
No 82
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=74.76 E-value=6.6 Score=36.02 Aligned_cols=105 Identities=19% Similarity=0.232 Sum_probs=57.7
Q ss_pred HHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEE
Q 045079 406 QTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFE 485 (596)
Q Consensus 406 qaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFe 485 (596)
..|++.+. .+.-+|+|+|.+.| .+...|+.+ + .++||||.. ...+ +.|+.... +
T Consensus 23 ~~l~~~~~-~~~~~vLdiG~G~G----~~~~~l~~~-~----~~~~~~D~~------~~~~--------~~~~~~~~--~ 76 (230)
T 3cc8_A 23 PNLLKHIK-KEWKEVLDIGCSSG----ALGAAIKEN-G----TRVSGIEAF------PEAA--------EQAKEKLD--H 76 (230)
T ss_dssp HHHHTTCC-TTCSEEEEETCTTS----HHHHHHHTT-T----CEEEEEESS------HHHH--------HHHHTTSS--E
T ss_pred HHHHHHhc-cCCCcEEEeCCCCC----HHHHHHHhc-C----CeEEEEeCC------HHHH--------HHHHHhCC--c
Confidence 44555554 55679999999988 355566666 2 589999973 2223 33333222 2
Q ss_pred EEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEee
Q 045079 486 YNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHG 549 (596)
Q Consensus 486 F~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~ 549 (596)
| +...+++.. +....+.+=+|-|...|+|+.+ | ..+|+.+ +-|+|.-.++.
T Consensus 77 ~--~~~d~~~~~---~~~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~L~~gG~l~~ 128 (230)
T 3cc8_A 77 V--VLGDIETMD---MPYEEEQFDCVIFGDVLEHLFD-------P-WAVIEKVKPYIKQNGVILA 128 (230)
T ss_dssp E--EESCTTTCC---CCSCTTCEEEEEEESCGGGSSC-------H-HHHHHHTGGGEEEEEEEEE
T ss_pred E--EEcchhhcC---CCCCCCccCEEEECChhhhcCC-------H-HHHHHHHHHHcCCCCEEEE
Confidence 2 222222211 2222233334445667788764 2 4677776 45689854443
No 83
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=74.64 E-value=17 Score=34.24 Aligned_cols=103 Identities=13% Similarity=0.206 Sum_probs=54.8
Q ss_pred cCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeeccccc
Q 045079 415 ATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWE 494 (596)
Q Consensus 415 ~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E 494 (596)
.+.-+|+|+|.+.|. +...|+.+ | .++||||.. ...++.+.+++ +..++..+|.. ..+.
T Consensus 40 ~~~~~vLDlGcG~G~----~~~~l~~~-~----~~v~gvD~s------~~~l~~a~~~~----~~~~~~v~~~~--~d~~ 98 (252)
T 1wzn_A 40 REVRRVLDLACGTGI----PTLELAER-G----YEVVGLDLH------EEMLRVARRKA----KERNLKIEFLQ--GDVL 98 (252)
T ss_dssp SCCCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESC------HHHHHHHHHHH----HHTTCCCEEEE--SCGG
T ss_pred cCCCEEEEeCCCCCH----HHHHHHHC-C----CeEEEEECC------HHHHHHHHHHH----HhcCCceEEEE--CChh
Confidence 445699999999984 33445554 2 389999973 34455554443 33455555433 2333
Q ss_pred ccCcccccccCCCeEEEEeecc-ccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeee
Q 045079 495 TIRLEDFKIDRDEVTVVNCVHR-MKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGI 550 (596)
Q Consensus 495 ~i~~edL~i~~dE~LaVN~~f~-Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e 550 (596)
++.. . +..=+|-|.+. ++++..+ ....+|+.+ +.|+|.-.++.+
T Consensus 99 ~~~~-----~-~~fD~v~~~~~~~~~~~~~------~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 99 EIAF-----K-NEFDAVTMFFSTIMYFDEE------DLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp GCCC-----C-SCEEEEEECSSGGGGSCHH------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred hccc-----C-CCccEEEEcCCchhcCCHH------HHHHHHHHHHHHcCCCeEEEEe
Confidence 3321 1 22323334433 3333211 134566665 557998766554
No 84
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=74.56 E-value=18 Score=34.55 Aligned_cols=32 Identities=16% Similarity=0.238 Sum_probs=23.2
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELP 456 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~p 456 (596)
..-.|+|+|.+.|. +...|+.+ | .++||||..
T Consensus 54 ~~~~vLDiGcG~G~----~~~~l~~~-~----~~v~gvD~s 85 (260)
T 2avn_A 54 NPCRVLDLGGGTGK----WSLFLQER-G----FEVVLVDPS 85 (260)
T ss_dssp SCCEEEEETCTTCH----HHHHHHTT-T----CEEEEEESC
T ss_pred CCCeEEEeCCCcCH----HHHHHHHc-C----CeEEEEeCC
Confidence 55689999999885 44456655 2 389999973
No 85
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=73.81 E-value=21 Score=33.99 Aligned_cols=130 Identities=16% Similarity=0.264 Sum_probs=68.7
Q ss_pred HHHHHHHHHhh--cccchhhhHHHHhHHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCC
Q 045079 382 DILKAYQMSLS--AWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPG 459 (596)
Q Consensus 382 d~lkAy~lf~~--~~Pf~kfa~~~ANqaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~g 459 (596)
++-..|..++. ...|.+.+..+.. .|.+.. .+.-.|+|+|.+.|. +...|+.+ |+ ++||||..
T Consensus 17 ~~a~~yd~~~~~~~~~~~~~~~~~~~-~l~~~~--~~~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s--- 81 (263)
T 3pfg_A 17 EIAELYDLVHQGKGKDYHREAADLAA-LVRRHS--PKAASLLDVACGTGM----HLRHLADS--FG---TVEGLELS--- 81 (263)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHH-HHHHHC--TTCCEEEEETCTTSH----HHHHHTTT--SS---EEEEEESC---
T ss_pred hHHHHHHHHhhcCCCCHHHHHHHHHH-HHHhhC--CCCCcEEEeCCcCCH----HHHHHHHc--CC---eEEEEECC---
Confidence 34455665554 2344444433322 122222 234689999999884 45566655 32 79999973
Q ss_pred CCChHHHHHHHHHHHHHHhhcCCcEEEEeecccccccCcccccccCCCeEEEEeec-cccCCCCCCcCCCCcHHHHHHHH
Q 045079 460 FRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETIRLEDFKIDRDEVTVVNCVH-RMKNLPDDTVVDSSPRDAVLDLI 538 (596)
Q Consensus 460 frp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f-~Lh~L~Desv~~~spRd~vL~~I 538 (596)
...++.+.+++. +| +|. ...++++. . ++.+=+|-|.+ .|+|+.+.. -...+|+.+
T Consensus 82 ---~~~~~~a~~~~~------~~--~~~--~~d~~~~~-----~-~~~fD~v~~~~~~l~~~~~~~-----~~~~~l~~~ 137 (263)
T 3pfg_A 82 ---ADMLAIARRRNP------DA--VLH--HGDMRDFS-----L-GRRFSAVTCMFSSIGHLAGQA-----ELDAALERF 137 (263)
T ss_dssp ---HHHHHHHHHHCT------TS--EEE--ECCTTTCC-----C-SCCEEEEEECTTGGGGSCHHH-----HHHHHHHHH
T ss_pred ---HHHHHHHHhhCC------CC--EEE--ECChHHCC-----c-cCCcCEEEEcCchhhhcCCHH-----HHHHHHHHH
Confidence 234444433321 33 232 22233222 2 34455566676 888887421 134567666
Q ss_pred -HhhCCcEEEeee
Q 045079 539 -KRINPDVFIHGI 550 (596)
Q Consensus 539 -r~L~P~Vfv~~e 550 (596)
+-|+|.-+++..
T Consensus 138 ~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 138 AAHVLPDGVVVVE 150 (263)
T ss_dssp HHTEEEEEEEEEC
T ss_pred HHhcCCCcEEEEE
Confidence 556998776654
No 86
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=73.28 E-value=28 Score=33.78 Aligned_cols=102 Identities=21% Similarity=0.323 Sum_probs=57.9
Q ss_pred cCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeeccccc
Q 045079 415 ATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWE 494 (596)
Q Consensus 415 ~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E 494 (596)
.+...|+|+|.+.|. +...|+.+- |+..++||||.. ...++.+.++ ++..+...+|.. ..++
T Consensus 21 ~~~~~vLDiGcG~G~----~~~~l~~~~--~~~~~v~gvD~s------~~~~~~a~~~----~~~~~~~v~~~~--~d~~ 82 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGY----LGLVLMPLL--PEGSKYTGIDSG------ETLLAEAREL----FRLLPYDSEFLE--GDAT 82 (284)
T ss_dssp CSCCEEEEETCTTTH----HHHHHTTTS--CTTCEEEEEESC------HHHHHHHHHH----HHSSSSEEEEEE--SCTT
T ss_pred CCCCeEEEecCCCCH----HHHHHHHhC--CCCCEEEEEECC------HHHHHHHHHH----HHhcCCceEEEE--cchh
Confidence 456789999999983 344555542 234789999973 2334443333 333444444432 3333
Q ss_pred ccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEe
Q 045079 495 TIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIH 548 (596)
Q Consensus 495 ~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~ 548 (596)
++.. ++.+=+|-|...|+|+.| + ..+|+.+ |-|+|.-.++
T Consensus 83 ~~~~------~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~LkpgG~l~ 123 (284)
T 3gu3_A 83 EIEL------NDKYDIAICHAFLLHMTT-------P-ETMLQKMIHSVKKGGKII 123 (284)
T ss_dssp TCCC------SSCEEEEEEESCGGGCSS-------H-HHHHHHHHHTEEEEEEEE
T ss_pred hcCc------CCCeeEEEECChhhcCCC-------H-HHHHHHHHHHcCCCCEEE
Confidence 3221 233445556667888865 2 3555555 6679987655
No 87
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=73.23 E-value=15 Score=33.19 Aligned_cols=110 Identities=11% Similarity=-0.020 Sum_probs=58.1
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCC-cEEEEeeccccc
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNV-PFEYNVIAQKWE 494 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gV-PFeF~~Ia~~~E 494 (596)
+.-+|+|+|.+.|.- ...++.+. .-++||||.. ...++.+.+++ +..++ ..+|. ...+.
T Consensus 44 ~~~~vLDlgcG~G~~----~~~~~~~~----~~~v~~vD~~------~~~~~~a~~~~----~~~~~~~v~~~--~~d~~ 103 (189)
T 3p9n_A 44 TGLAVLDLYAGSGAL----GLEALSRG----AASVLFVESD------QRSAAVIARNI----EALGLSGATLR--RGAVA 103 (189)
T ss_dssp TTCEEEEETCTTCHH----HHHHHHTT----CSEEEEEECC------HHHHHHHHHHH----HHHTCSCEEEE--ESCHH
T ss_pred CCCEEEEeCCCcCHH----HHHHHHCC----CCeEEEEECC------HHHHHHHHHHH----HHcCCCceEEE--EccHH
Confidence 445799999998842 22233332 2489999973 34455444443 33454 24443 23333
Q ss_pred ccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHHh---hCCcEEEeeeecCCC
Q 045079 495 TIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKR---INPDVFIHGISNGTY 555 (596)
Q Consensus 495 ~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir~---L~P~Vfv~~e~n~~~ 555 (596)
++.. .+.-..=++|+.|..|. +..+ -...+|..+++ |+|.-+++.+.+...
T Consensus 104 ~~~~-~~~~~~fD~i~~~~p~~--~~~~-------~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 104 AVVA-AGTTSPVDLVLADPPYN--VDSA-------DVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp HHHH-HCCSSCCSEEEECCCTT--SCHH-------HHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred HHHh-hccCCCccEEEECCCCC--cchh-------hHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 2211 01011224777776543 2211 13567777765 899988777665443
No 88
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=72.40 E-value=7.9 Score=36.06 Aligned_cols=103 Identities=14% Similarity=0.067 Sum_probs=53.5
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHh------h----cCCcEE
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCE------R----FNVPFE 485 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~------~----~gVPFe 485 (596)
+.-+|+|+|.+.|.- ...|+.+ | .++||||.. ...|+.+.++... +. . .....+
T Consensus 22 ~~~~vLD~GCG~G~~----~~~la~~-g----~~V~gvD~S------~~~l~~a~~~~~~-~~~~~~~~~~~~~~~~~v~ 85 (203)
T 1pjz_A 22 PGARVLVPLCGKSQD----MSWLSGQ-G----YHVVGAELS------EAAVERYFTERGE-QPHITSQGDFKVYAAPGIE 85 (203)
T ss_dssp TTCEEEETTTCCSHH----HHHHHHH-C----CEEEEEEEC------HHHHHHHHHHHCS-CSEEEEETTEEEEECSSSE
T ss_pred CCCEEEEeCCCCcHh----HHHHHHC-C----CeEEEEeCC------HHHHHHHHHHccC-CcccccccccccccCCccE
Confidence 456899999998843 3446654 2 489999973 3445554433210 00 0 011222
Q ss_pred EEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHH-hhCCcEE
Q 045079 486 YNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIK-RINPDVF 546 (596)
Q Consensus 486 F~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir-~L~P~Vf 546 (596)
|.. ....++...+ .+.+=+|-|...|+|+.++ -+..+|+.|+ -|+|.-.
T Consensus 86 ~~~--~d~~~l~~~~----~~~fD~v~~~~~l~~l~~~------~~~~~l~~~~r~LkpgG~ 135 (203)
T 1pjz_A 86 IWC--GDFFALTARD----IGHCAAFYDRAAMIALPAD------MRERYVQHLEALMPQACS 135 (203)
T ss_dssp EEE--ECCSSSTHHH----HHSEEEEEEESCGGGSCHH------HHHHHHHHHHHHSCSEEE
T ss_pred EEE--CccccCCccc----CCCEEEEEECcchhhCCHH------HHHHHHHHHHHHcCCCcE
Confidence 221 1222222111 0234445556677887643 2566787765 5799853
No 89
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=72.36 E-value=4.2 Score=39.21 Aligned_cols=108 Identities=14% Similarity=0.065 Sum_probs=58.0
Q ss_pred HHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEE
Q 045079 406 QTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFE 485 (596)
Q Consensus 406 qaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFe 485 (596)
..|++.+.-...-+|+|+|.+.|. +...|+. |..++||||... ..+ +.|+... ..+
T Consensus 24 ~~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~s~------~~~--------~~a~~~~-~~~ 79 (261)
T 3ege_A 24 NAIINLLNLPKGSVIADIGAGTGG----YSVALAN-----QGLFVYAVEPSI------VMR--------QQAVVHP-QVE 79 (261)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTSH----HHHHHHT-----TTCEEEEECSCH------HHH--------HSSCCCT-TEE
T ss_pred HHHHHHhCCCCCCEEEEEcCcccH----HHHHHHh-----CCCEEEEEeCCH------HHH--------HHHHhcc-CCE
Confidence 345555544566789999999985 3334443 236999999731 222 2333322 333
Q ss_pred EEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcE-EEeeeecC
Q 045079 486 YNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDV-FIHGISNG 553 (596)
Q Consensus 486 F~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~V-fv~~e~n~ 553 (596)
|. ...++++. ...+.+=+|-|.+.|||+.| + ..+|+.+ |-|+ .- +++.+.+.
T Consensus 80 ~~--~~d~~~~~-----~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~Lk-gG~~~~~~~~~ 133 (261)
T 3ege_A 80 WF--TGYAENLA-----LPDKSVDGVISILAIHHFSH-------L-EKSFQEMQRIIR-DGTIVLLTFDI 133 (261)
T ss_dssp EE--CCCTTSCC-----SCTTCBSEEEEESCGGGCSS-------H-HHHHHHHHHHBC-SSCEEEEEECG
T ss_pred EE--ECchhhCC-----CCCCCEeEEEEcchHhhccC-------H-HHHHHHHHHHhC-CcEEEEEEcCC
Confidence 32 22333332 22233335556667888854 2 3556555 5568 63 55555543
No 90
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=72.14 E-value=25 Score=34.53 Aligned_cols=95 Identities=17% Similarity=0.187 Sum_probs=54.1
Q ss_pred EEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeecccccccCc
Q 045079 419 HIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETIRL 498 (596)
Q Consensus 419 HIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E~i~~ 498 (596)
.|+|+|.+.|. +...|+.+ + -++||||+. ...++ .|++. -.++|.. ...|
T Consensus 42 ~vLDvGcGtG~----~~~~l~~~-~----~~v~gvD~s------~~ml~--------~a~~~-~~v~~~~--~~~e---- 91 (257)
T 4hg2_A 42 DALDCGCGSGQ----ASLGLAEF-F----ERVHAVDPG------EAQIR--------QALRH-PRVTYAV--APAE---- 91 (257)
T ss_dssp EEEEESCTTTT----THHHHHTT-C----SEEEEEESC------HHHHH--------TCCCC-TTEEEEE--CCTT----
T ss_pred CEEEEcCCCCH----HHHHHHHh-C----CEEEEEeCc------HHhhh--------hhhhc-CCceeeh--hhhh----
Confidence 68999999994 33445544 2 379999973 22232 33332 1233322 2233
Q ss_pred ccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeeeecC
Q 045079 499 EDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGISNG 553 (596)
Q Consensus 499 edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e~n~ 553 (596)
++.+..+.+=+|-|...||++. .+.+|..+ |-|+|.-.+.....+
T Consensus 92 -~~~~~~~sfD~v~~~~~~h~~~---------~~~~~~e~~rvLkpgG~l~~~~~~ 137 (257)
T 4hg2_A 92 -DTGLPPASVDVAIAAQAMHWFD---------LDRFWAELRRVARPGAVFAAVTYG 137 (257)
T ss_dssp -CCCCCSSCEEEEEECSCCTTCC---------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -hhcccCCcccEEEEeeehhHhh---------HHHHHHHHHHHcCCCCEEEEEECC
Confidence 3444455555666777787753 24567666 556999876555443
No 91
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=70.13 E-value=33 Score=34.58 Aligned_cols=112 Identities=16% Similarity=0.174 Sum_probs=58.3
Q ss_pred HHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--
Q 045079 406 QTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP-- 483 (596)
Q Consensus 406 qaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP-- 483 (596)
++|++.+.-.+.-+|+|+|.+.|. |...++++ | .-+++|||.. + .++.+.++ ++..|++
T Consensus 28 ~ai~~~~~~~~~~~VLDiGcGtG~----ls~~la~~--g--~~~v~~vD~s-~------~~~~a~~~----~~~~~~~~~ 88 (328)
T 1g6q_1 28 NAIIQNKDLFKDKIVLDVGCGTGI----LSMFAAKH--G--AKHVIGVDMS-S------IIEMAKEL----VELNGFSDK 88 (328)
T ss_dssp HHHHHHHHHHTTCEEEEETCTTSH----HHHHHHHT--C--CSEEEEEESS-T------HHHHHHHH----HHHTTCTTT
T ss_pred HHHHhhHhhcCCCEEEEecCccHH----HHHHHHHC--C--CCEEEEEChH-H------HHHHHHHH----HHHcCCCCC
Confidence 345444444445689999999994 33445554 2 2489999974 2 24333322 3344543
Q ss_pred EEEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEe
Q 045079 484 FEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIH 548 (596)
Q Consensus 484 FeF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~ 548 (596)
.+| +...++++...+ .+=++|+.+.+ .+.+..+ ...+.+|..+ |-|+|.-.++
T Consensus 89 i~~--~~~d~~~~~~~~---~~~D~Ivs~~~--~~~l~~~-----~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 89 ITL--LRGKLEDVHLPF---PKVDIIISEWM--GYFLLYE-----SMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp EEE--EESCTTTSCCSS---SCEEEEEECCC--BTTBSTT-----CCHHHHHHHHHHHEEEEEEEE
T ss_pred EEE--EECchhhccCCC---CcccEEEEeCc--hhhcccH-----HHHHHHHHHHHhhcCCCeEEE
Confidence 343 333444433211 11134444433 2233332 1245677776 6679997765
No 92
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=69.84 E-value=16 Score=37.31 Aligned_cols=111 Identities=14% Similarity=0.092 Sum_probs=59.6
Q ss_pred HHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCC--c
Q 045079 406 QTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNV--P 483 (596)
Q Consensus 406 qaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gV--P 483 (596)
++|.+.+.-.+.-+|+|+|.+.|. |...++++ | ..+++|||.. + .++.+.+++ +..|+ .
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~----ls~~la~~-g---~~~v~gvD~s-----~--~~~~a~~~~----~~~~~~~~ 114 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGI----LSMFAAKA-G---AKKVLGVDQS-----E--ILYQAMDII----RLNKLEDT 114 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSH----HHHHHHHT-T---CSEEEEEESS-----T--HHHHHHHHH----HHTTCTTT
T ss_pred HHHHhhhhhcCCCEEEEeeccCcH----HHHHHHHc-C---CCEEEEEChH-----H--HHHHHHHHH----HHcCCCCc
Confidence 455555544455689999999984 44455655 2 2589999973 1 344443333 33344 2
Q ss_pred EEEEeecccccccCcccccccCCCeEEEEe-eccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEe
Q 045079 484 FEYNVIAQKWETIRLEDFKIDRDEVTVVNC-VHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIH 548 (596)
Q Consensus 484 FeF~~Ia~~~E~i~~edL~i~~dE~LaVN~-~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~ 548 (596)
.+| +....+++...+ ..=++|+.+. .|.+++.. ..+.+|..+ |-|+|.-.++
T Consensus 115 i~~--~~~d~~~~~~~~---~~~D~Ivs~~~~~~l~~~~--------~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 115 ITL--IKGKIEEVHLPV---EKVDVIISEWMGYFLLFES--------MLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEE--EESCTTTSCCSC---SCEEEEEECCCBTTBTTTC--------HHHHHHHHHHHHEEEEEEEE
T ss_pred EEE--EEeeHHHhcCCC---CcEEEEEEcCchhhccCHH--------HHHHHHHHHHhhcCCCcEEE
Confidence 333 333344332211 1114555554 23333321 245677776 6679987765
No 93
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=69.37 E-value=4.8 Score=40.61 Aligned_cols=100 Identities=8% Similarity=0.171 Sum_probs=63.0
Q ss_pred eeEEEEceeccc-cchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeecccccc
Q 045079 417 RLHIIDFGICYG-FQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWET 495 (596)
Q Consensus 417 ~vHIIDfgI~~G-~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E~ 495 (596)
--.|+|+|.+.| +-+|. + |..+++|+|.. . .+-..+.+++..+|+++.|...-
T Consensus 106 p~~VLDlGCG~gpLal~~-------~----~~~~y~a~DId------~----~~i~~ar~~~~~~g~~~~~~v~D----- 159 (253)
T 3frh_A 106 PRRVLDIACGLNPLALYE-------R----GIASVWGCDIH------Q----GLGDVITPFAREKDWDFTFALQD----- 159 (253)
T ss_dssp CSEEEEETCTTTHHHHHH-------T----TCSEEEEEESB------H----HHHHHHHHHHHHTTCEEEEEECC-----
T ss_pred CCeEEEecCCccHHHHHh-------c----cCCeEEEEeCC------H----HHHHHHHHHHHhcCCCceEEEee-----
Confidence 448999999887 22222 2 67899999974 2 33345666677889999886532
Q ss_pred cCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHHhhCCcEEEeeee
Q 045079 496 IRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGIS 551 (596)
Q Consensus 496 i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir~L~P~Vfv~~e~ 551 (596)
+....+.- +.+++.++- .+|+|-++ .+...++.+..|+|..||+.-.
T Consensus 160 ~~~~~~~~-~~DvvLllk--~lh~LE~q------~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 160 VLCAPPAE-AGDLALIFK--LLPLLERE------QAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp TTTSCCCC-BCSEEEEES--CHHHHHHH------STTHHHHHHHHCBCSEEEEEEE
T ss_pred cccCCCCC-CcchHHHHH--HHHHhhhh------chhhHHHHHHHhcCCCEEEEcC
Confidence 22222221 344555553 34566544 2456779999999998887655
No 94
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=69.21 E-value=9.8 Score=38.34 Aligned_cols=113 Identities=14% Similarity=0.133 Sum_probs=63.7
Q ss_pred HHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--
Q 045079 406 QTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP-- 483 (596)
Q Consensus 406 qaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP-- 483 (596)
+.|++.+.-.+..+|+|+|.+.|.- ...|+.+. |.+++|++|.| ..++.+.+++. ..|++
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~----~~~l~~~~---~~~~~~~~D~~-------~~~~~a~~~~~----~~~~~~~ 234 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGF----AAAIARRA---PHVSATVLEMA-------GTVDTARSYLK----DEGLSDR 234 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHH----HHHHHHHC---TTCEEEEEECT-------THHHHHHHHHH----HTTCTTT
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHH----HHHHHHhC---CCCEEEEecCH-------HHHHHHHHHHH----hcCCCCc
Confidence 4566666545567999999999943 33444332 46899999973 23555544443 34553
Q ss_pred EEEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEE-Eeeee
Q 045079 484 FEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVF-IHGIS 551 (596)
Q Consensus 484 FeF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vf-v~~e~ 551 (596)
++|..- .+.+ .+ +..+=+|-|...|||+.|+. ...+|+.| +.|+|.-. ++.+.
T Consensus 235 v~~~~~--d~~~----~~---~~~~D~v~~~~vl~~~~~~~------~~~~l~~~~~~L~pgG~l~i~e~ 289 (360)
T 1tw3_A 235 VDVVEG--DFFE----PL---PRKADAIILSFVLLNWPDHD------AVRILTRCAEALEPGGRILIHER 289 (360)
T ss_dssp EEEEEC--CTTS----CC---SSCEEEEEEESCGGGSCHHH------HHHHHHHHHHTEEEEEEEEEEEC
T ss_pred eEEEeC--CCCC----CC---CCCccEEEEcccccCCCHHH------HHHHHHHHHHhcCCCcEEEEEEE
Confidence 555432 2211 11 11244455666778876542 23677776 45699864 44443
No 95
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=68.98 E-value=15 Score=36.23 Aligned_cols=106 Identities=9% Similarity=0.090 Sum_probs=60.3
Q ss_pred cCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--EEEEeeccc
Q 045079 415 ATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP--FEYNVIAQK 492 (596)
Q Consensus 415 ~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP--FeF~~Ia~~ 492 (596)
...-+|+|+|.+.|. +...|+.+ ..|..++||||.. ...++.+. +.++..|++ .+|.. ..
T Consensus 117 ~~~~~vLDiGcG~G~----~~~~la~~--~~~~~~v~gvD~s------~~~~~~a~----~~~~~~~~~~~v~~~~--~d 178 (305)
T 3ocj_A 117 RPGCVVASVPCGWMS----ELLALDYS--ACPGVQLVGIDYD------PEALDGAT----RLAAGHALAGQITLHR--QD 178 (305)
T ss_dssp CTTCEEEETTCTTCH----HHHTSCCT--TCTTCEEEEEESC------HHHHHHHH----HHHTTSTTGGGEEEEE--CC
T ss_pred CCCCEEEEecCCCCH----HHHHHHHh--cCCCCeEEEEECC------HHHHHHHH----HHHHhcCCCCceEEEE--Cc
Confidence 345679999999883 33444422 2356799999973 23444443 334555665 55543 33
Q ss_pred ccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEee
Q 045079 493 WETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHG 549 (596)
Q Consensus 493 ~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~ 549 (596)
++++. .. +.+=+|-|...++|+.|.. ....+|+.+ +.|+|.-.++.
T Consensus 179 ~~~~~-----~~-~~fD~v~~~~~~~~~~~~~-----~~~~~l~~~~~~LkpgG~l~i 225 (305)
T 3ocj_A 179 AWKLD-----TR-EGYDLLTSNGLNIYEPDDA-----RVTELYRRFWQALKPGGALVT 225 (305)
T ss_dssp GGGCC-----CC-SCEEEEECCSSGGGCCCHH-----HHHHHHHHHHHHEEEEEEEEE
T ss_pred hhcCC-----cc-CCeEEEEECChhhhcCCHH-----HHHHHHHHHHHhcCCCeEEEE
Confidence 33332 12 3344555666788887642 122467766 56799876654
No 96
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=68.58 E-value=17 Score=33.28 Aligned_cols=96 Identities=15% Similarity=0.174 Sum_probs=51.3
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeecccccc
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWET 495 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E~ 495 (596)
+.-+|+|+|.+.|. +...| +. -++||||.. ...++.+.+++ -++ +|. ...+++
T Consensus 36 ~~~~vLdiG~G~G~----~~~~l----~~---~~v~~vD~s------~~~~~~a~~~~------~~~--~~~--~~d~~~ 88 (211)
T 2gs9_A 36 PGESLLEVGAGTGY----WLRRL----PY---PQKVGVEPS------EAMLAVGRRRA------PEA--TWV--RAWGEA 88 (211)
T ss_dssp CCSEEEEETCTTCH----HHHHC----CC---SEEEEECCC------HHHHHHHHHHC------TTS--EEE--CCCTTS
T ss_pred CCCeEEEECCCCCH----hHHhC----CC---CeEEEEeCC------HHHHHHHHHhC------CCc--EEE--Eccccc
Confidence 55689999999884 22333 11 289999963 23344433332 133 222 222332
Q ss_pred cCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEe-eee
Q 045079 496 IRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIH-GIS 551 (596)
Q Consensus 496 i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~-~e~ 551 (596)
+....+.+=+|-|...|||+.+ + ..+|+.+ |-|+|.-.++ ...
T Consensus 89 -----~~~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~L~pgG~l~i~~~ 133 (211)
T 2gs9_A 89 -----LPFPGESFDVVLLFTTLEFVED-------V-ERVLLEARRVLRPGGALVVGVL 133 (211)
T ss_dssp -----CCSCSSCEEEEEEESCTTTCSC-------H-HHHHHHHHHHEEEEEEEEEEEE
T ss_pred -----CCCCCCcEEEEEEcChhhhcCC-------H-HHHHHHHHHHcCCCCEEEEEec
Confidence 2233333334455677888764 3 3566655 5679986443 444
No 97
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=68.02 E-value=38 Score=33.56 Aligned_cols=114 Identities=17% Similarity=0.121 Sum_probs=60.5
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--EEEEeecccc
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP--FEYNVIAQKW 493 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP--FeF~~Ia~~~ 493 (596)
..-+|+|+|.+.|. +.-.|+.+ |..++||||.. ...++.+.++ ++..|+. .+|.. ..|
T Consensus 123 ~~~~vLDlG~GsG~----~~~~la~~----~~~~v~~vDis------~~al~~A~~n----~~~~~l~~~v~~~~--~D~ 182 (284)
T 1nv8_A 123 GIKTVADIGTGSGA----IGVSVAKF----SDAIVFATDVS------SKAVEIARKN----AERHGVSDRFFVRK--GEF 182 (284)
T ss_dssp TCCEEEEESCTTSH----HHHHHHHH----SSCEEEEEESC------HHHHHHHHHH----HHHTTCTTSEEEEE--SST
T ss_pred CCCEEEEEeCchhH----HHHHHHHC----CCCEEEEEECC------HHHHHHHHHH----HHHcCCCCceEEEE--Ccc
Confidence 34579999999984 33444544 35799999973 3445544433 4455665 55543 334
Q ss_pred cccCcccccccCCCeEEEEeecccc--CCCCCCcCCCCcH----------HHHHHHH-HhhCCcEEEeeeecC
Q 045079 494 ETIRLEDFKIDRDEVTVVNCVHRMK--NLPDDTVVDSSPR----------DAVLDLI-KRINPDVFIHGISNG 553 (596)
Q Consensus 494 E~i~~edL~i~~dE~LaVN~~f~Lh--~L~Desv~~~spR----------d~vL~~I-r~L~P~Vfv~~e~n~ 553 (596)
.+.-.. ...+-++|+.|-.|.-. ++..+ +. ..|. +.+-+.+ +.++|.-+++.|...
T Consensus 183 ~~~~~~--~f~~~D~IvsnPPyi~~~~~l~~~-v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~ 251 (284)
T 1nv8_A 183 LEPFKE--KFASIEMILSNPPYVKSSAHLPKD-VL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGE 251 (284)
T ss_dssp TGGGGG--GTTTCCEEEECCCCBCGGGSCTTS-CC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCT
T ss_pred hhhccc--ccCCCCEEEEcCCCCCcccccChh-hc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECc
Confidence 331111 11111678888554321 22221 11 2233 3334445 677898877776543
No 98
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=67.43 E-value=41 Score=32.71 Aligned_cols=106 Identities=8% Similarity=0.027 Sum_probs=56.6
Q ss_pred cCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHH-H------H-h------hc
Q 045079 415 ATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKS-Y------C-E------RF 480 (596)
Q Consensus 415 ~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~-~------A-~------~~ 480 (596)
.+.-+|+|+|.+.|. +...||.+ | .++||||.. ...|+.+.++... + + . ..
T Consensus 67 ~~~~~vLD~GCG~G~----~~~~La~~-G----~~V~gvD~S------~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAI----EMKWFADR-G----HTVVGVEIS------EIGIREFFAEQNLSYTEEPLAEIAGAKVFKSS 131 (252)
T ss_dssp CCSCEEEETTCTTCT----HHHHHHHT-T----CEEEEECSC------HHHHHHHHHHTTCCEEEEECTTSTTCEEEEET
T ss_pred CCCCeEEEeCCCCcH----HHHHHHHC-C----CeEEEEECC------HHHHHHHHHhcccccccccccccccccccccC
Confidence 356789999999984 34557765 3 389999973 2344443222110 0 0 0 00
Q ss_pred CCcEEEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHHh-hCCcEEE
Q 045079 481 NVPFEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKR-INPDVFI 547 (596)
Q Consensus 481 gVPFeF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir~-L~P~Vfv 547 (596)
+...+|.. ..+.++...+ .+.+=+|-+...|++|.++ .|..+++.|++ |+|.-.+
T Consensus 132 ~~~i~~~~--~D~~~l~~~~----~~~FD~V~~~~~l~~l~~~------~~~~~l~~~~~~LkpGG~l 187 (252)
T 2gb4_A 132 SGSISLYC--CSIFDLPRAN----IGKFDRIWDRGALVAINPG------DHDRYADIILSLLRKEFQY 187 (252)
T ss_dssp TSSEEEEE--SCTTTGGGGC----CCCEEEEEESSSTTTSCGG------GHHHHHHHHHHTEEEEEEE
T ss_pred CCceEEEE--CccccCCccc----CCCEEEEEEhhhhhhCCHH------HHHHHHHHHHHHcCCCeEE
Confidence 12233322 2222222211 1345455566678888643 36678887754 7998654
No 99
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=67.23 E-value=15 Score=35.66 Aligned_cols=44 Identities=20% Similarity=0.143 Sum_probs=28.3
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHH
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRL 473 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL 473 (596)
+.-+|+|+|.+.|. +..|+. .+. + -+|||||.. ...++.+.+++
T Consensus 71 ~~~~vLDiGcG~G~-~~~l~~---~~~-~---~~v~gvD~s------~~~l~~a~~~~ 114 (289)
T 2g72_A 71 SGRTLIDIGSGPTV-YQLLSA---CSH-F---EDITMTDFL------EVNRQELGRWL 114 (289)
T ss_dssp CCSEEEEETCTTCC-GGGTTG---GGG-C---SEEEEECSC------HHHHHHHHHHH
T ss_pred CCCeEEEECCCcCh-HHHHhh---ccC-C---CeEEEeCCC------HHHHHHHHHHH
Confidence 45689999999998 544322 222 2 389999973 34566555544
No 100
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=66.62 E-value=46 Score=29.80 Aligned_cols=31 Identities=19% Similarity=0.384 Sum_probs=22.6
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELP 456 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~p 456 (596)
+.-.|+|+|.+.|. +...|+.+. ++||||..
T Consensus 23 ~~~~vLD~GcG~G~----~~~~l~~~~------~v~gvD~s 53 (170)
T 3q87_B 23 EMKIVLDLGTSTGV----ITEQLRKRN------TVVSTDLN 53 (170)
T ss_dssp CSCEEEEETCTTCH----HHHHHTTTS------EEEEEESC
T ss_pred CCCeEEEeccCccH----HHHHHHhcC------cEEEEECC
Confidence 33489999999983 455566543 99999973
No 101
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=65.96 E-value=3.8 Score=40.58 Aligned_cols=48 Identities=15% Similarity=0.369 Sum_probs=29.5
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHH
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSY 476 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~ 476 (596)
+.-.|+|+|.+.|. +...|+.+-+ ..+|||||.. ...++.+.+++..+
T Consensus 46 ~~~~VLDiGCG~G~----~~~~la~~~~---~~~v~gvDis------~~~i~~A~~~~~~~ 93 (292)
T 3g07_A 46 RGRDVLDLGCNVGH----LTLSIACKWG---PSRMVGLDID------SRLIHSARQNIRHY 93 (292)
T ss_dssp TTSEEEEESCTTCH----HHHHHHHHTC---CSEEEEEESC------HHHHHHHHHTC---
T ss_pred CCCcEEEeCCCCCH----HHHHHHHHcC---CCEEEEECCC------HHHHHHHHHHHHhh
Confidence 44589999999993 3444454432 2499999973 34566666665544
No 102
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=65.82 E-value=19 Score=32.90 Aligned_cols=53 Identities=17% Similarity=0.033 Sum_probs=32.8
Q ss_pred HHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHH
Q 045079 408 IRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRL 473 (596)
Q Consensus 408 IleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL 473 (596)
+++.+.-...-+|+|+|.+.|. +...|+.+ + |..++||||.. .+.++.+.+++
T Consensus 32 ~l~~l~~~~~~~vLDiG~G~G~----~~~~la~~--~-~~~~v~~vD~s------~~~~~~a~~~~ 84 (204)
T 3e05_A 32 TLSKLRLQDDLVMWDIGAGSAS----VSIEASNL--M-PNGRIFALERN------PQYLGFIRDNL 84 (204)
T ss_dssp HHHHTTCCTTCEEEEETCTTCH----HHHHHHHH--C-TTSEEEEEECC------HHHHHHHHHHH
T ss_pred HHHHcCCCCCCEEEEECCCCCH----HHHHHHHH--C-CCCEEEEEeCC------HHHHHHHHHHH
Confidence 4555555566789999999885 23334433 1 45699999973 34455544443
No 103
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=64.83 E-value=40 Score=30.66 Aligned_cols=105 Identities=12% Similarity=0.128 Sum_probs=56.2
Q ss_pred HHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc-EEE
Q 045079 408 IRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP-FEY 486 (596)
Q Consensus 408 IleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP-FeF 486 (596)
+++.+.-.+.-+|+|+|.+.|..-.. |+.+ + -++|||+.. ...++.+.+++. ..|++ .+|
T Consensus 69 ~~~~l~~~~~~~vLdiG~G~G~~~~~----la~~-~----~~v~~vD~~------~~~~~~a~~~~~----~~~~~~v~~ 129 (210)
T 3lbf_A 69 MTELLELTPQSRVLEIGTGSGYQTAI----LAHL-V----QHVCSVERI------KGLQWQARRRLK----NLDLHNVST 129 (210)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHH----HHHH-S----SEEEEEESC------HHHHHHHHHHHH----HTTCCSEEE
T ss_pred HHHhcCCCCCCEEEEEcCCCCHHHHH----HHHh-C----CEEEEEecC------HHHHHHHHHHHH----HcCCCceEE
Confidence 45555545667899999998864333 3333 2 489999973 344555544443 34554 444
Q ss_pred EeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHHhhCCcEEEeeee
Q 045079 487 NVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGIS 551 (596)
Q Consensus 487 ~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir~L~P~Vfv~~e~ 551 (596)
.. ..+......+ .+=++|+++ ..++|+++ ...+.|+|.-.++...
T Consensus 130 ~~--~d~~~~~~~~---~~~D~i~~~--~~~~~~~~-------------~~~~~L~pgG~lv~~~ 174 (210)
T 3lbf_A 130 RH--GDGWQGWQAR---APFDAIIVT--AAPPEIPT-------------ALMTQLDEGGILVLPV 174 (210)
T ss_dssp EE--SCGGGCCGGG---CCEEEEEES--SBCSSCCT-------------HHHHTEEEEEEEEEEE
T ss_pred EE--CCcccCCccC---CCccEEEEc--cchhhhhH-------------HHHHhcccCcEEEEEE
Confidence 32 2222211111 111344443 45567664 2567789986555443
No 104
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=63.10 E-value=30 Score=31.94 Aligned_cols=110 Identities=14% Similarity=0.135 Sum_probs=54.9
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc-EEEEeeccccc
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP-FEYNVIAQKWE 494 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP-FeF~~Ia~~~E 494 (596)
..-.|+|+|.+.|. +...|+.+. |..++||||.. ...++.+.+++ +..|++ .+|.. ..+.
T Consensus 41 ~~~~vLDiGcG~G~----~~~~la~~~---p~~~v~gvD~s------~~~l~~a~~~~----~~~~~~~v~~~~--~d~~ 101 (214)
T 1yzh_A 41 DNPIHVEVGSGKGA----FVSGMAKQN---PDINYIGIDIQ------KSVLSYALDKV----LEVGVPNIKLLW--VDGS 101 (214)
T ss_dssp CCCEEEEESCTTSH----HHHHHHHHC---TTSEEEEEESC------HHHHHHHHHHH----HHHCCSSEEEEE--CCSS
T ss_pred CCCeEEEEccCcCH----HHHHHHHHC---CCCCEEEEEcC------HHHHHHHHHHH----HHcCCCCEEEEe--CCHH
Confidence 44579999999984 333444432 35799999973 34455444443 344553 44432 2333
Q ss_pred ccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcH----HHHHHHHH-hhCCcEEEeeee
Q 045079 495 TIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPR----DAVLDLIK-RINPDVFIHGIS 551 (596)
Q Consensus 495 ~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spR----d~vL~~Ir-~L~P~Vfv~~e~ 551 (596)
++. +.+.-..=++|++|.. .+.... ...+| ..+|..+. .|+|.-.++.+.
T Consensus 102 ~~~-~~~~~~~~D~i~~~~~--~~~~~~----~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 102 DLT-DYFEDGEIDRLYLNFS--DPWPKK----RHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp CGG-GTSCTTCCSEEEEESC--CCCCSG----GGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred HHH-hhcCCCCCCEEEEECC--CCcccc----chhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 221 0011111245666632 111000 00111 46777765 489997766654
No 105
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=62.65 E-value=13 Score=40.11 Aligned_cols=112 Identities=14% Similarity=0.152 Sum_probs=60.4
Q ss_pred HHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--
Q 045079 406 QTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP-- 483 (596)
Q Consensus 406 qaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP-- 483 (596)
.+|++.+...+.-+|+|+|.+.|. +...|+.++ ..+||||+.. ..++.+ .+.++..|+.
T Consensus 148 ~~il~~l~~~~~~~VLDiGcGtG~----la~~la~~~----~~~V~gvD~s-------~~l~~A----~~~~~~~gl~~~ 208 (480)
T 3b3j_A 148 RAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQAG----ARKIYAVEAS-------TMAQHA----EVLVKSNNLTDR 208 (480)
T ss_dssp HHHHHTGGGTTTCEEEEESCSTTH----HHHHHHHTT----CSEEEEEECH-------HHHHHH----HHHHHHTTCTTT
T ss_pred HHHHHhhhhcCCCEEEEecCcccH----HHHHHHHcC----CCEEEEEEcH-------HHHHHH----HHHHHHcCCCCc
Confidence 456666655555699999999885 444566542 3599999962 233322 3334445653
Q ss_pred EEEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHHhhCCcEEEee
Q 045079 484 FEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHG 549 (596)
Q Consensus 484 FeF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir~L~P~Vfv~~ 549 (596)
.+| +..+++++... ..=++|+.|.+ ++|+.++. ..+.+...-+-|+|+-.++.
T Consensus 209 v~~--~~~d~~~~~~~----~~fD~Ivs~~~--~~~~~~e~-----~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 209 IVV--IPGKVEEVSLP----EQVDIIISEPM--GYMLFNER-----MLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp EEE--EESCTTTCCCS----SCEEEEECCCC--HHHHTCHH-----HHHHHHHGGGGEEEEEEEES
T ss_pred EEE--EECchhhCccC----CCeEEEEEeCc--hHhcCcHH-----HHHHHHHHHHhcCCCCEEEE
Confidence 444 33445443221 11134444433 34444332 23444444567799877664
No 106
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=62.26 E-value=45 Score=31.88 Aligned_cols=109 Identities=13% Similarity=0.127 Sum_probs=55.7
Q ss_pred cCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeeccccc
Q 045079 415 ATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWE 494 (596)
Q Consensus 415 ~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E 494 (596)
.+.-+|+|+|.+.|.--.. |+.++ ..++||||.. ...++.+.+++ ...++.-..+.+...++
T Consensus 63 ~~~~~vLDiGcG~G~~~~~----l~~~~----~~~v~gvD~s------~~~~~~a~~~~----~~~~~~~~v~~~~~d~~ 124 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLK----YERAG----IGEYYGVDIA------EVSINDARVRA----RNMKRRFKVFFRAQDSY 124 (298)
T ss_dssp CTTCEEEEETCTTTTTHHH----HHHHT----CSEEEEEESC------HHHHHHHHHHH----HTSCCSSEEEEEESCTT
T ss_pred CCCCeEEEECCCCCHHHHH----HHHCC----CCEEEEEECC------HHHHHHHHHHH----HhcCCCccEEEEECCcc
Confidence 3446899999999853322 33332 2489999973 34455444433 34455323333333333
Q ss_pred ccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEee
Q 045079 495 TIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHG 549 (596)
Q Consensus 495 ~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~ 549 (596)
++... .++.+=+|-|.+.|||+.... .. ...+|+.+ +-|+|.-.++.
T Consensus 125 ~~~~~----~~~~fD~v~~~~~l~~~~~~~---~~-~~~~l~~~~~~LkpgG~l~~ 172 (298)
T 1ri5_A 125 GRHMD----LGKEFDVISSQFSFHYAFSTS---ES-LDIAQRNIARHLRPGGYFIM 172 (298)
T ss_dssp TSCCC----CSSCEEEEEEESCGGGGGSSH---HH-HHHHHHHHHHTEEEEEEEEE
T ss_pred ccccC----CCCCcCEEEECchhhhhcCCH---HH-HHHHHHHHHHhcCCCCEEEE
Confidence 33210 123333444556677753110 11 24566665 55799865544
No 107
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=62.00 E-value=19 Score=36.94 Aligned_cols=103 Identities=11% Similarity=0.105 Sum_probs=57.1
Q ss_pred HHHHHhhh-hcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcE
Q 045079 406 QTIRKLAE-KATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPF 484 (596)
Q Consensus 406 qaIleA~~-g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPF 484 (596)
..|++.+. -...-+|+|+|.+.|.-- ..|+++. |.+++|++|.|. .++. |+.. -..
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~~~----~~l~~~~---p~~~~~~~D~~~-------~~~~--------a~~~-~~v 246 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGATV----AAIAAHY---PTIKGVNFDLPH-------VISE--------APQF-PGV 246 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHH----HHHHHHC---TTCEEEEEECHH-------HHTT--------CCCC-TTE
T ss_pred HHHHHhcccccCCCEEEEeCCCCCHHH----HHHHHHC---CCCeEEEecCHH-------HHHh--------hhhc-CCe
Confidence 45666654 345679999999999543 3444332 567999999742 2221 2221 123
Q ss_pred EEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHH-hhCCcEEE
Q 045079 485 EYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIK-RINPDVFI 547 (596)
Q Consensus 485 eF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir-~L~P~Vfv 547 (596)
+|.. ..+.+ .+. .++++ -+.+.||++.|+. ...+|+.++ .|+|.-.+
T Consensus 247 ~~~~--~D~~~----~~p--~~D~v--~~~~vlh~~~d~~------~~~~L~~~~~~L~pgG~l 294 (364)
T 3p9c_A 247 THVG--GDMFK----EVP--SGDTI--LMKWILHDWSDQH------CATLLKNCYDALPAHGKV 294 (364)
T ss_dssp EEEE--CCTTT----CCC--CCSEE--EEESCGGGSCHHH------HHHHHHHHHHHSCTTCEE
T ss_pred EEEe--CCcCC----CCC--CCCEE--EehHHhccCCHHH------HHHHHHHHHHHcCCCCEE
Confidence 4432 22221 111 22343 3556788887652 346788875 57997643
No 108
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=61.46 E-value=34 Score=30.88 Aligned_cols=110 Identities=13% Similarity=0.142 Sum_probs=52.7
Q ss_pred eeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCC--cEEEEeeccccc
Q 045079 417 RLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNV--PFEYNVIAQKWE 494 (596)
Q Consensus 417 ~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gV--PFeF~~Ia~~~E 494 (596)
.-.|+|+|.+.|. +...|+.+-+ |.-++||||.. ...++.+.+++ +..|+ .++| +...++
T Consensus 23 ~~~vLDlGcG~G~----~~~~l~~~~~--~~~~v~~vD~s------~~~~~~a~~~~----~~~~~~~~v~~--~~~d~~ 84 (197)
T 3eey_A 23 GDTVVDATCGNGN----DTAFLASLVG--ENGRVFGFDIQ------DKAIANTTKKL----TDLNLIDRVTL--IKDGHQ 84 (197)
T ss_dssp TCEEEESCCTTSH----HHHHHHHHHC--TTCEEEEECSC------HHHHHHHHHHH----HHTTCGGGEEE--ECSCGG
T ss_pred CCEEEEcCCCCCH----HHHHHHHHhC--CCCEEEEEECC------HHHHHHHHHHH----HHcCCCCCeEE--EECCHH
Confidence 3489999999984 2233333311 22399999973 34455544443 44455 3444 333333
Q ss_pred ccCcccccccCCCeEEEEeeccccCCCCCCcCCC---CcHHHHHHH-HHhhCCcEEEeee
Q 045079 495 TIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDS---SPRDAVLDL-IKRINPDVFIHGI 550 (596)
Q Consensus 495 ~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~---spRd~vL~~-Ir~L~P~Vfv~~e 550 (596)
++.. .+. ..=++|+.|..| +.. .+..+ .. .+.. +|+. .+-|+|.-.++..
T Consensus 85 ~~~~-~~~-~~fD~v~~~~~~-~~~-~~~~~-~~~~~~~~~-~l~~~~~~Lk~gG~l~~~ 138 (197)
T 3eey_A 85 NMDK-YID-CPVKAVMFNLGY-LPS-GDHSI-STRPETTIQ-ALSKAMELLVTGGIITVV 138 (197)
T ss_dssp GGGG-TCC-SCEEEEEEEESB-CTT-SCTTC-BCCHHHHHH-HHHHHHHHEEEEEEEEEE
T ss_pred HHhh-hcc-CCceEEEEcCCc-ccC-ccccc-ccCcccHHH-HHHHHHHhCcCCCEEEEE
Confidence 3321 011 122466666655 111 11111 11 1233 5554 4667998655443
No 109
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=61.19 E-value=16 Score=33.35 Aligned_cols=67 Identities=12% Similarity=0.077 Sum_probs=39.1
Q ss_pred HHhHHHHHhhh--hcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhc
Q 045079 403 FANQTIRKLAE--KATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERF 480 (596)
Q Consensus 403 ~ANqaIleA~~--g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~ 480 (596)
-..+.+++.+. -.+.-+|+|+|.+.|. +...|+.++ ..++||||.. ...++.+.++ ++..
T Consensus 45 ~~~~~~~~~l~~~~~~~~~vLDiG~G~G~----~~~~l~~~~----~~~v~~vD~s------~~~~~~a~~~----~~~~ 106 (205)
T 3grz_A 45 QTTQLAMLGIERAMVKPLTVADVGTGSGI----LAIAAHKLG----AKSVLATDIS------DESMTAAEEN----AALN 106 (205)
T ss_dssp HHHHHHHHHHHHHCSSCCEEEEETCTTSH----HHHHHHHTT----CSEEEEEESC------HHHHHHHHHH----HHHT
T ss_pred ccHHHHHHHHHHhccCCCEEEEECCCCCH----HHHHHHHCC----CCEEEEEECC------HHHHHHHHHH----HHHc
Confidence 34455556555 2355789999999983 333466542 3589999973 2344444333 3445
Q ss_pred CCc-EEEE
Q 045079 481 NVP-FEYN 487 (596)
Q Consensus 481 gVP-FeF~ 487 (596)
+++ ++|.
T Consensus 107 ~~~~v~~~ 114 (205)
T 3grz_A 107 GIYDIALQ 114 (205)
T ss_dssp TCCCCEEE
T ss_pred CCCceEEE
Confidence 655 5543
No 110
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=61.11 E-value=38 Score=31.45 Aligned_cols=62 Identities=15% Similarity=0.054 Sum_probs=38.2
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--E
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP--F 484 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP--F 484 (596)
.+++.+.-...-.|+|+|.+.|. +...|+.+ + .++||||.. .+.++.+. +.++.+|++ +
T Consensus 46 ~~l~~l~~~~~~~vLDlGcG~G~----~~~~la~~-~----~~v~~vD~s------~~~~~~a~----~~~~~~g~~~~v 106 (204)
T 3njr_A 46 LTLAALAPRRGELLWDIGGGSGS----VSVEWCLA-G----GRAITIEPR------ADRIENIQ----KNIDTYGLSPRM 106 (204)
T ss_dssp HHHHHHCCCTTCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESC------HHHHHHHH----HHHHHTTCTTTE
T ss_pred HHHHhcCCCCCCEEEEecCCCCH----HHHHHHHc-C----CEEEEEeCC------HHHHHHHH----HHHHHcCCCCCE
Confidence 34555544555689999999884 33445555 2 589999973 24454443 345566776 6
Q ss_pred EEE
Q 045079 485 EYN 487 (596)
Q Consensus 485 eF~ 487 (596)
+|.
T Consensus 107 ~~~ 109 (204)
T 3njr_A 107 RAV 109 (204)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 111
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=60.57 E-value=17 Score=31.64 Aligned_cols=105 Identities=14% Similarity=-0.019 Sum_probs=53.2
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeecccccc
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWET 495 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E~ 495 (596)
+.-+|+|+|.+.|. +...|+.+ |+ . +||||.. ...++.+.+++. ..++..+|. ...+.+
T Consensus 41 ~~~~vLD~GcG~G~----~~~~l~~~--~~-~--v~~vD~~------~~~~~~a~~~~~----~~~~~~~~~--~~d~~~ 99 (171)
T 1ws6_A 41 RRGRFLDPFAGSGA----VGLEAASE--GW-E--AVLVEKD------PEAVRLLKENVR----RTGLGARVV--ALPVEV 99 (171)
T ss_dssp TCCEEEEETCSSCH----HHHHHHHT--TC-E--EEEECCC------HHHHHHHHHHHH----HHTCCCEEE--CSCHHH
T ss_pred CCCeEEEeCCCcCH----HHHHHHHC--CC-e--EEEEeCC------HHHHHHHHHHHH----HcCCceEEE--eccHHH
Confidence 44579999999984 33445544 33 3 9999973 344554444433 334433332 233322
Q ss_pred cCccccccc--CCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH---HhhCCcEEEeeeecCC
Q 045079 496 IRLEDFKID--RDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI---KRINPDVFIHGISNGT 554 (596)
Q Consensus 496 i~~edL~i~--~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I---r~L~P~Vfv~~e~n~~ 554 (596)
.. ..+.-. .=++|+.|..|. .. . ..++..+ +-|+|.-.++.+....
T Consensus 100 ~~-~~~~~~~~~~D~i~~~~~~~-~~-~----------~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 100 FL-PEAKAQGERFTVAFMAPPYA-MD-L----------AALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp HH-HHHHHTTCCEEEEEECCCTT-SC-T----------THHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred HH-HhhhccCCceEEEEECCCCc-hh-H----------HHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 10 001000 114566665554 11 1 2455555 4589987776655443
No 112
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=59.94 E-value=13 Score=33.09 Aligned_cols=108 Identities=12% Similarity=-0.013 Sum_probs=57.2
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--EEEEeecccc
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP--FEYNVIAQKW 493 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP--FeF~~Ia~~~ 493 (596)
+.-.|+|+|.+.|. +...|+.++ .-++||||.. ...++.+.+ .++..|++ .+|. ...+
T Consensus 31 ~~~~vLDlGcG~G~----~~~~l~~~~----~~~v~~vD~~------~~~~~~a~~----~~~~~~~~~~~~~~--~~d~ 90 (177)
T 2esr_A 31 NGGRVLDLFAGSGG----LAIEAVSRG----MSAAVLVEKN------RKAQAIIQD----NIIMTKAENRFTLL--KMEA 90 (177)
T ss_dssp CSCEEEEETCTTCH----HHHHHHHTT----CCEEEEECCC------HHHHHHHHH----HHHTTTCGGGEEEE--CSCH
T ss_pred CCCeEEEeCCCCCH----HHHHHHHcC----CCEEEEEECC------HHHHHHHHH----HHHHcCCCCceEEE--ECcH
Confidence 34579999999884 233455552 2589999973 234444333 34455665 4443 3333
Q ss_pred cccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH---HhhCCcEEEeeeecCCCC
Q 045079 494 ETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI---KRINPDVFIHGISNGTYN 556 (596)
Q Consensus 494 E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I---r~L~P~Vfv~~e~n~~~n 556 (596)
.+... .+. ..=++|+.|..|... ....++..+ +-|+|.-+++.+......
T Consensus 91 ~~~~~-~~~-~~fD~i~~~~~~~~~-----------~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 91 ERAID-CLT-GRFDLVFLDPPYAKE-----------TIVATIEALAAKNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp HHHHH-HBC-SCEEEEEECCSSHHH-----------HHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred HHhHH-hhc-CCCCEEEECCCCCcc-----------hHHHHHHHHHhCCCcCCCcEEEEEECCccc
Confidence 32110 000 111466666554211 124566666 567999877766554433
No 113
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=59.49 E-value=23 Score=36.23 Aligned_cols=103 Identities=12% Similarity=0.109 Sum_probs=56.4
Q ss_pred HHHHHhhh-hcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcE
Q 045079 406 QTIRKLAE-KATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPF 484 (596)
Q Consensus 406 qaIleA~~-g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPF 484 (596)
..|++.+. -...-+|+|+|.+.|. +...|+.+. |.+++|++|.| ..++ .|+.. -..
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-------~~~~--------~a~~~-~~v 248 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGA----VASMIVAKY---PSINAINFDLP-------HVIQ--------DAPAF-SGV 248 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECH-------HHHT--------TCCCC-TTE
T ss_pred HHHHHhcccccCCCEEEEeCCCcCH----HHHHHHHhC---CCCEEEEEehH-------HHHH--------hhhhc-CCC
Confidence 44556554 2445799999999985 344444433 56899999973 1222 12221 123
Q ss_pred EEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEE
Q 045079 485 EYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFI 547 (596)
Q Consensus 485 eF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv 547 (596)
+|.. ..+.+ .+. .++++ -+.+.||++.|+. ...+|+.+ +.|+|.-.+
T Consensus 249 ~~~~--~d~~~----~~p--~~D~v--~~~~vlh~~~~~~------~~~~l~~~~~~L~pgG~l 296 (368)
T 3reo_A 249 EHLG--GDMFD----GVP--KGDAI--FIKWICHDWSDEH------CLKLLKNCYAALPDHGKV 296 (368)
T ss_dssp EEEE--CCTTT----CCC--CCSEE--EEESCGGGBCHHH------HHHHHHHHHHHSCTTCEE
T ss_pred EEEe--cCCCC----CCC--CCCEE--EEechhhcCCHHH------HHHHHHHHHHHcCCCCEE
Confidence 4432 22221 111 22343 4455688887652 34678877 457998633
No 114
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=59.22 E-value=24 Score=32.04 Aligned_cols=98 Identities=12% Similarity=0.067 Sum_probs=53.1
Q ss_pred eeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc-EEEEeecccccc
Q 045079 417 RLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP-FEYNVIAQKWET 495 (596)
Q Consensus 417 ~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP-FeF~~Ia~~~E~ 495 (596)
.-+|+|+|.+.|.--..|.+.+ |..++||||.. ...++.+ .+.++..|++ .+|.. ..+++
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~-------~~~~v~~vD~s------~~~~~~a----~~~~~~~~~~~v~~~~--~d~~~ 126 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVR-------PEAHFTLLDSL------GKRVRFL----RQVQHELKLENIEPVQ--SRVEE 126 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHC-------TTSEEEEEESC------HHHHHHH----HHHHHHTTCSSEEEEE--CCTTT
T ss_pred CCeEEEECCCCCHHHHHHHHHC-------CCCEEEEEeCC------HHHHHHH----HHHHHHcCCCCeEEEe--cchhh
Confidence 4589999999997555554432 34689999973 2334433 3334455665 55533 33433
Q ss_pred cCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeeee
Q 045079 496 IRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGIS 551 (596)
Q Consensus 496 i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e~ 551 (596)
+... ..=++|+.|. + .+...+|..+ +.|+|.-.++.+.
T Consensus 127 ~~~~----~~~D~i~~~~------~--------~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 127 FPSE----PPFDGVISRA------F--------ASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp SCCC----SCEEEEECSC------S--------SSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred CCcc----CCcCEEEEec------c--------CCHHHHHHHHHHhcCCCcEEEEEe
Confidence 3211 1112333321 1 1245677776 4569987766653
No 115
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=58.97 E-value=54 Score=28.81 Aligned_cols=40 Identities=20% Similarity=0.223 Sum_probs=25.4
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELP 456 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~p 456 (596)
.+++.+- .+.-+|+|+|.+.|. +...|+.+ + .++|||+..
T Consensus 38 ~~l~~~~-~~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~~D~~ 77 (195)
T 3cgg_A 38 RLIDAMA-PRGAKILDAGCGQGR----IGGYLSKQ-G----HDVLGTDLD 77 (195)
T ss_dssp HHHHHHS-CTTCEEEEETCTTTH----HHHHHHHT-T----CEEEEEESC
T ss_pred HHHHHhc-cCCCeEEEECCCCCH----HHHHHHHC-C----CcEEEEcCC
Confidence 3444442 244589999999885 34445544 2 389999963
No 116
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=57.51 E-value=53 Score=30.64 Aligned_cols=54 Identities=17% Similarity=0.179 Sum_probs=32.7
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc-EEE
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP-FEY 486 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP-FeF 486 (596)
..-.|+|+|.+.|.- +..||.+. |..++||||.. ...++.+.++ ++..|++ ++|
T Consensus 38 ~~~~vLDiGcG~G~~----~~~la~~~---p~~~v~giD~s------~~~l~~a~~~----~~~~~~~nv~~ 92 (213)
T 2fca_A 38 DNPIHIEVGTGKGQF----ISGMAKQN---PDINYIGIELF------KSVIVTAVQK----VKDSEAQNVKL 92 (213)
T ss_dssp CCCEEEEECCTTSHH----HHHHHHHC---TTSEEEEECSC------HHHHHHHHHH----HHHSCCSSEEE
T ss_pred CCceEEEEecCCCHH----HHHHHHHC---CCCCEEEEEec------hHHHHHHHHH----HHHcCCCCEEE
Confidence 455799999999843 33445442 44799999973 3445544443 3445654 444
No 117
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=57.40 E-value=16 Score=33.92 Aligned_cols=103 Identities=13% Similarity=0.016 Sum_probs=54.6
Q ss_pred eeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCC-cEEEEeecccccc
Q 045079 417 RLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNV-PFEYNVIAQKWET 495 (596)
Q Consensus 417 ~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gV-PFeF~~Ia~~~E~ 495 (596)
.-+|+|+|.+.|.--..+ +.+ + . -+|||||.. ...++.+.++ ++..|+ ..+|. ...+++
T Consensus 55 ~~~vLDlgcG~G~~~~~l----~~~-~-~--~~V~~vD~s------~~~l~~a~~~----~~~~~~~~v~~~--~~D~~~ 114 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEA----LSR-Y-A--AGATLIEMD------RAVSQQLIKN----LATLKAGNARVV--NSNAMS 114 (202)
T ss_dssp TCEEEETTCTTCHHHHHH----HHT-T-C--SEEEEECSC------HHHHHHHHHH----HHHTTCCSEEEE--CSCHHH
T ss_pred CCeEEEeCCCcCHHHHHH----Hhc-C-C--CEEEEEECC------HHHHHHHHHH----HHHcCCCcEEEE--ECCHHH
Confidence 357999999988533222 223 2 1 289999973 3445554444 344555 34443 223322
Q ss_pred cCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHHh---hCCcEEEeeeec
Q 045079 496 IRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKR---INPDVFIHGISN 552 (596)
Q Consensus 496 i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir~---L~P~Vfv~~e~n 552 (596)
.... .-..=++|++|..|+. . -...+|+.|++ |+|.-+++.+.+
T Consensus 115 ~~~~--~~~~fD~V~~~~p~~~----~-------~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 115 FLAQ--KGTPHNIVFVDPPFRR----G-------LLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp HHSS--CCCCEEEEEECCSSST----T-------THHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred HHhh--cCCCCCEEEECCCCCC----C-------cHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 1110 0011136666655431 1 23568888877 999876665544
No 118
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=57.02 E-value=7.2 Score=39.49 Aligned_cols=106 Identities=10% Similarity=0.059 Sum_probs=57.8
Q ss_pred HHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCC--c
Q 045079 406 QTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNV--P 483 (596)
Q Consensus 406 qaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gV--P 483 (596)
..|++.+.-...-+|+|+|.+.|.- ...|+.+. |.+++|++|.|. .+. .+.++..++ .
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~~----~~~l~~~~---p~~~~~~~D~~~-------~~~------~~~~~~~~~~~~ 233 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGGF----LLTVLREH---PGLQGVLLDRAE-------VVA------RHRLDAPDVAGR 233 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSHH----HHHHHHHC---TTEEEEEEECHH-------HHT------TCCCCCGGGTTS
T ss_pred HHHHHhCCccCCceEEEECCccCHH----HHHHHHHC---CCCEEEEecCHH-------Hhh------cccccccCCCCC
Confidence 3566665545678999999999853 33444332 568999999741 121 111122222 2
Q ss_pred EEEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEE
Q 045079 484 FEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFI 547 (596)
Q Consensus 484 FeF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv 547 (596)
.+|..- .+. +.+. .-+ +|-+.+.|||+.|+. ...+|+.+ +.|+|.-.+
T Consensus 234 v~~~~~--d~~----~~~p--~~D--~v~~~~vlh~~~d~~------~~~~L~~~~~~LkpgG~l 282 (348)
T 3lst_A 234 WKVVEG--DFL----REVP--HAD--VHVLKRILHNWGDED------SVRILTNCRRVMPAHGRV 282 (348)
T ss_dssp EEEEEC--CTT----TCCC--CCS--EEEEESCGGGSCHHH------HHHHHHHHHHTCCTTCEE
T ss_pred eEEEec--CCC----CCCC--CCc--EEEEehhccCCCHHH------HHHHHHHHHHhcCCCCEE
Confidence 444432 111 1111 112 444556778887642 24678877 556997544
No 119
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=56.95 E-value=11 Score=35.39 Aligned_cols=106 Identities=14% Similarity=0.158 Sum_probs=53.8
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeecccccc
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWET 495 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E~ 495 (596)
..-.|+|+|.+.|. +...|+.+ ++ ++||||.. ...++.+.+++ .. ...+|.. ..+++
T Consensus 56 ~~~~vLD~GcG~G~----~~~~la~~--~~---~v~gvD~s------~~~~~~a~~~~----~~--~~~~~~~--~d~~~ 112 (245)
T 3ggd_A 56 PELPLIDFACGNGT----QTKFLSQF--FP---RVIGLDVS------KSALEIAAKEN----TA--ANISYRL--LDGLV 112 (245)
T ss_dssp TTSCEEEETCTTSH----HHHHHHHH--SS---CEEEEESC------HHHHHHHHHHS----CC--TTEEEEE--CCTTC
T ss_pred CCCeEEEEcCCCCH----HHHHHHHh--CC---CEEEEECC------HHHHHHHHHhC----cc--cCceEEE--Ccccc
Confidence 34569999999884 34444443 22 89999973 23444443332 11 1334432 22222
Q ss_pred cCcccccccCC-CeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEE-Eeeee
Q 045079 496 IRLEDFKIDRD-EVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVF-IHGIS 551 (596)
Q Consensus 496 i~~edL~i~~d-E~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vf-v~~e~ 551 (596)
+.... .++.+ -.-+|-|...+||+.++. +..+|+.+ +.|+|.-. ++++.
T Consensus 113 ~~~~~-~~~~~~~~d~v~~~~~~~~~~~~~------~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 113 PEQAA-QIHSEIGDANIYMRTGFHHIPVEK------RELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp HHHHH-HHHHHHCSCEEEEESSSTTSCGGG------HHHHHHHHHHHHTTTCEEEEEEE
T ss_pred ccccc-ccccccCccEEEEcchhhcCCHHH------HHHHHHHHHHHcCCCCEEEEEeC
Confidence 21110 11101 133555666778876432 34666665 56799764 44443
No 120
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=56.73 E-value=72 Score=29.07 Aligned_cols=56 Identities=18% Similarity=0.302 Sum_probs=34.8
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHH
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLK 474 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~ 474 (596)
.+++.+.-...-+|+|+|.+.|.--..|.+.. | |..++|+|+.. ...++.+.+++.
T Consensus 68 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-----~-~~~~v~~vD~~------~~~~~~a~~~~~ 123 (215)
T 2yxe_A 68 MMCELLDLKPGMKVLEIGTGCGYHAAVTAEIV-----G-EDGLVVSIERI------PELAEKAERTLR 123 (215)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH-----C-TTSEEEEEESC------HHHHHHHHHHHH
T ss_pred HHHHhhCCCCCCEEEEECCCccHHHHHHHHHh-----C-CCCEEEEEeCC------HHHHHHHHHHHH
Confidence 34455544555689999999886555555444 2 34589999963 344555544443
No 121
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=56.48 E-value=75 Score=28.54 Aligned_cols=98 Identities=13% Similarity=0.088 Sum_probs=51.0
Q ss_pred EEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeecccccccCc
Q 045079 419 HIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETIRL 498 (596)
Q Consensus 419 HIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E~i~~ 498 (596)
.|+|+|.+.|. +...|+.+ | .++||||.. ...++.+.+++. ..++.++|.. ..++++..
T Consensus 32 ~vLdiGcG~G~----~~~~l~~~-~----~~v~~vD~s------~~~~~~a~~~~~----~~~~~~~~~~--~d~~~~~~ 90 (202)
T 2kw5_A 32 KILCLAEGEGR----NACFLASL-G----YEVTAVDQS------SVGLAKAKQLAQ----EKGVKITTVQ--SNLADFDI 90 (202)
T ss_dssp EEEECCCSCTH----HHHHHHTT-T----CEEEEECSS------HHHHHHHHHHHH----HHTCCEEEEC--CBTTTBSC
T ss_pred CEEEECCCCCH----hHHHHHhC-C----CeEEEEECC------HHHHHHHHHHHH----hcCCceEEEE--cChhhcCC
Confidence 89999999875 34556655 2 389999973 344555444443 3355555533 23333321
Q ss_pred ccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeee
Q 045079 499 EDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGI 550 (596)
Q Consensus 499 edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e 550 (596)
. -..=++|+.+ +.|+..+ -...+|+.+ +.|+|.-.++..
T Consensus 91 ~---~~~fD~v~~~----~~~~~~~------~~~~~l~~~~~~L~pgG~l~~~ 130 (202)
T 2kw5_A 91 V---ADAWEGIVSI----FCHLPSS------LRQQLYPKVYQGLKPGGVFILE 130 (202)
T ss_dssp C---TTTCSEEEEE----CCCCCHH------HHHHHHHHHHTTCCSSEEEEEE
T ss_pred C---cCCccEEEEE----hhcCCHH------HHHHHHHHHHHhcCCCcEEEEE
Confidence 1 1111344432 2333211 134566666 556998765544
No 122
>2j66_A BTRK, decarboxylase; butirosin, AHBA biosynthesis, lyase; HET: PLP; 1.65A {Bacillus circulans}
Probab=55.98 E-value=96 Score=32.26 Aligned_cols=70 Identities=14% Similarity=0.202 Sum_probs=43.6
Q ss_pred CeeEE-EEcee--------------cccc---chHHHHHHHhcCCCCCCeEEEEeecCC-CCCCCChHHHHHHHHHHHHH
Q 045079 416 TRLHI-IDFGI--------------CYGF---QWPCLIQILSSRPTGPPMLRITGIELP-QPGFRPAERVEETGNRLKSY 476 (596)
Q Consensus 416 ~~vHI-IDfgI--------------~~G~---QWp~Liq~LA~R~gGPP~LRITgI~~p-q~gfrp~~~leetG~rL~~~ 476 (596)
-+||| ||-|+ .+|+ +|+.+++.+...+ .|+|.||..- .+.....+...++-+++.++
T Consensus 133 ~~V~lrvn~g~~~~~~~~~~~~~~srfG~~~~e~~~~~~~~~~~~----~l~l~Gl~~H~gs~~~~~~~~~~~~~~~~~~ 208 (428)
T 2j66_A 133 ARVAIRINPDKSFGSTAIKMGGVPRQFGMDESMLDAVMDAVRSLQ----FTKFIGIHVYTGTQNLNTDSIIESMKYTVDL 208 (428)
T ss_dssp EEEEEEEECSSCC--CCCSSSCCCCSSSEEGGGHHHHHHHHHHCT----TEEEEEEECCCCSCBCCHHHHHHHHHHHHHH
T ss_pred ceEEEEEcCCCCCCCCccccCCCCCCCCCCHHHHHHHHHHHHhCC----CCCEEEEEEECCCCCCCHHHHHHHHHHHHHH
Confidence 46888 88875 5776 6777888877643 5999999763 11112234444555566555
Q ss_pred Hh----hcCCcEEEEee
Q 045079 477 CE----RFNVPFEYNVI 489 (596)
Q Consensus 477 A~----~~gVPFeF~~I 489 (596)
++ .+|+++++--+
T Consensus 209 ~~~l~~~~g~~~~~l~~ 225 (428)
T 2j66_A 209 GRNIYERYGIVCECINL 225 (428)
T ss_dssp HHHHHHHHCCCCSEEEC
T ss_pred HHHHHHHhCCCCCEEEe
Confidence 54 44777665443
No 123
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=55.93 E-value=39 Score=30.13 Aligned_cols=42 Identities=14% Similarity=0.257 Sum_probs=27.7
Q ss_pred eEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHH
Q 045079 418 LHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLK 474 (596)
Q Consensus 418 vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~ 474 (596)
-+|+|+|.+.|.- ...|+.+ ..++||||.. .+.++.+.+++.
T Consensus 24 ~~vLDiGcG~G~~----~~~la~~-----~~~v~~vD~s------~~~l~~a~~~~~ 65 (185)
T 3mti_A 24 SIVVDATMGNGND----TAFLAGL-----SKKVYAFDVQ------EQALGKTSQRLS 65 (185)
T ss_dssp CEEEESCCTTSHH----HHHHHTT-----SSEEEEEESC------HHHHHHHHHHHH
T ss_pred CEEEEEcCCCCHH----HHHHHHh-----CCEEEEEECC------HHHHHHHHHHHH
Confidence 4799999999853 3345655 2589999973 345655554444
No 124
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=55.91 E-value=23 Score=33.80 Aligned_cols=113 Identities=11% Similarity=0.085 Sum_probs=57.3
Q ss_pred cCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc-EEEEeecccc
Q 045079 415 ATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP-FEYNVIAQKW 493 (596)
Q Consensus 415 ~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP-FeF~~Ia~~~ 493 (596)
...=+|+|+|.+.| .+...|+.+. |..++||||... ..-++. ..+..+-++..|++ .+|. ....
T Consensus 23 ~~~~~vLDiGCG~G----~~~~~la~~~---~~~~v~GvD~s~-----~~ml~~-A~~A~~~~~~~~~~~v~~~--~~d~ 87 (225)
T 3p2e_A 23 QFDRVHIDLGTGDG----RNIYKLAIND---QNTFYIGIDPVK-----ENLFDI-SKKIIKKPSKGGLSNVVFV--IAAA 87 (225)
T ss_dssp TCSEEEEEETCTTS----HHHHHHHHTC---TTEEEEEECSCC-----GGGHHH-HHHHTSCGGGTCCSSEEEE--CCBT
T ss_pred CCCCEEEEEeccCc----HHHHHHHHhC---CCCEEEEEeCCH-----HHHHHH-HHHHHHHHHHcCCCCeEEE--EcCH
Confidence 34457999999888 4555666543 458999999842 222222 12222233455665 5553 2344
Q ss_pred cccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEee
Q 045079 494 ETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHG 549 (596)
Q Consensus 494 E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~ 549 (596)
+++. ..+ .+-+..|.+.|...++. .... ..+ ..+|+.+ |-|+|.-.++.
T Consensus 88 ~~l~-~~~---~d~v~~i~~~~~~~~~~-~~~~-~~~-~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 88 ESLP-FEL---KNIADSISILFPWGTLL-EYVI-KPN-RDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp TBCC-GGG---TTCEEEEEEESCCHHHH-HHHH-TTC-HHHHHHHHTTEEEEEEEEE
T ss_pred HHhh-hhc---cCeEEEEEEeCCCcHHh-hhhh-cch-HHHHHHHHHhcCCCcEEEE
Confidence 4442 111 14455555554332210 0000 012 3466666 45699876554
No 125
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=55.03 E-value=44 Score=30.50 Aligned_cols=38 Identities=16% Similarity=0.166 Sum_probs=24.8
Q ss_pred HHHhhhh-cCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 045079 408 IRKLAEK-ATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQ 457 (596)
Q Consensus 408 IleA~~g-~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq 457 (596)
|++.+.. ...-+|+|+|.+.|.- ...|+ .++||||...
T Consensus 58 ~~~~l~~~~~~~~vLDiG~G~G~~----~~~l~--------~~v~~~D~s~ 96 (215)
T 2zfu_A 58 IARDLRQRPASLVVADFGCGDCRL----ASSIR--------NPVHCFDLAS 96 (215)
T ss_dssp HHHHHHTSCTTSCEEEETCTTCHH----HHHCC--------SCEEEEESSC
T ss_pred HHHHHhccCCCCeEEEECCcCCHH----HHHhh--------ccEEEEeCCC
Confidence 4555542 3456899999998852 23332 4899999753
No 126
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=53.25 E-value=72 Score=29.30 Aligned_cols=100 Identities=11% Similarity=0.152 Sum_probs=52.5
Q ss_pred cCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeeccccc
Q 045079 415 ATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWE 494 (596)
Q Consensus 415 ~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E 494 (596)
.+.-+|+|+|.+.|.--. .|+.+ ++ ++||||.. ...++.+.+++ -+ .+|.. ..++
T Consensus 39 ~~~~~vLdiG~G~G~~~~----~l~~~--~~---~v~~~D~s------~~~~~~a~~~~------~~--~~~~~--~d~~ 93 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLE----HFTKE--FG---DTAGLELS------EDMLTHARKRL------PD--ATLHQ--GDMR 93 (239)
T ss_dssp TTCCEEEEETCTTSHHHH----HHHHH--HS---EEEEEESC------HHHHHHHHHHC------TT--CEEEE--CCTT
T ss_pred CCCCeEEEecccCCHHHH----HHHHh--CC---cEEEEeCC------HHHHHHHHHhC------CC--CEEEE--CCHH
Confidence 345689999999985433 33333 22 89999973 23344333322 12 33322 2222
Q ss_pred ccCcccccccCCCeEEEEeec-cccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeee
Q 045079 495 TIRLEDFKIDRDEVTVVNCVH-RMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGI 550 (596)
Q Consensus 495 ~i~~edL~i~~dE~LaVN~~f-~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e 550 (596)
++ .. ++.+=+|-|.+ .++|+.+.. -...+|+.+ +.|+|.-.++..
T Consensus 94 ~~-----~~-~~~~D~v~~~~~~~~~~~~~~-----~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 94 DF-----RL-GRKFSAVVSMFSSVGYLKTTE-----ELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp TC-----CC-SSCEEEEEECTTGGGGCCSHH-----HHHHHHHHHHHTEEEEEEEEEC
T ss_pred Hc-----cc-CCCCcEEEEcCchHhhcCCHH-----HHHHHHHHHHHhcCCCeEEEEE
Confidence 22 22 23333344444 788886421 134666666 556998766543
No 127
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=52.73 E-value=42 Score=31.00 Aligned_cols=89 Identities=13% Similarity=0.127 Sum_probs=47.6
Q ss_pred eeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeeccccccc
Q 045079 417 RLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETI 496 (596)
Q Consensus 417 ~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E~i 496 (596)
.-+|+|+|.+.|.- ...|+.+ |||+.. ...++. |+..++. |.. ..++++
T Consensus 48 ~~~vLDiG~G~G~~----~~~l~~~---------~~vD~s------~~~~~~--------a~~~~~~--~~~--~d~~~~ 96 (219)
T 1vlm_A 48 EGRGVEIGVGTGRF----AVPLKIK---------IGVEPS------ERMAEI--------ARKRGVF--VLK--GTAENL 96 (219)
T ss_dssp SSCEEEETCTTSTT----HHHHTCC---------EEEESC------HHHHHH--------HHHTTCE--EEE--CBTTBC
T ss_pred CCcEEEeCCCCCHH----HHHHHHH---------hccCCC------HHHHHH--------HHhcCCE--EEE--cccccC
Confidence 45799999998852 3345544 999863 223332 3333443 322 223322
Q ss_pred CcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEee
Q 045079 497 RLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHG 549 (596)
Q Consensus 497 ~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~ 549 (596)
....+.+=+|-|...|+|+.+ + ..+|+.+ +.|+|.-.++.
T Consensus 97 -----~~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~L~pgG~l~i 137 (219)
T 1vlm_A 97 -----PLKDESFDFALMVTTICFVDD-------P-ERALKEAYRILKKGGYLIV 137 (219)
T ss_dssp -----CSCTTCEEEEEEESCGGGSSC-------H-HHHHHHHHHHEEEEEEEEE
T ss_pred -----CCCCCCeeEEEEcchHhhccC-------H-HHHHHHHHHHcCCCcEEEE
Confidence 222233334445567788753 3 4566665 56699865443
No 128
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=52.70 E-value=18 Score=36.12 Aligned_cols=50 Identities=10% Similarity=0.112 Sum_probs=31.7
Q ss_pred CeeEEEEceeccccchHHHHHHHhcC-CCCCCeEEEEeecCCCCCCCChHHHHHHHH
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSR-PTGPPMLRITGIELPQPGFRPAERVEETGN 471 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R-~gGPP~LRITgI~~pq~gfrp~~~leetG~ 471 (596)
+.+.|.|.|.+.|----+|--.|+.. +..+...+|+|+|.. ...|+.+.+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis------~~~L~~Ar~ 155 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDID------TEVLEKARS 155 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESC------HHHHHHHHH
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECC------HHHHHHHHh
Confidence 46999999999996433444444443 222225799999984 345655544
No 129
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=51.51 E-value=48 Score=34.78 Aligned_cols=100 Identities=16% Similarity=0.214 Sum_probs=53.3
Q ss_pred EEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeecccccccCc
Q 045079 419 HIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETIRL 498 (596)
Q Consensus 419 HIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E~i~~ 498 (596)
+|+|+|.+.| +|-.+|.|.|. -+++||+.. +. ++ ..+ +.++.-|+.=....|..+.+++.+
T Consensus 86 ~VLDvG~GtG-----iLs~~Aa~aGA---~~V~ave~s-----~~--~~-~a~---~~~~~n~~~~~i~~i~~~~~~~~l 146 (376)
T 4hc4_A 86 TVLDVGAGTG-----ILSIFCAQAGA---RRVYAVEAS-----AI--WQ-QAR---EVVRFNGLEDRVHVLPGPVETVEL 146 (376)
T ss_dssp EEEEETCTTS-----HHHHHHHHTTC---SEEEEEECS-----TT--HH-HHH---HHHHHTTCTTTEEEEESCTTTCCC
T ss_pred EEEEeCCCcc-----HHHHHHHHhCC---CEEEEEeCh-----HH--HH-HHH---HHHHHcCCCceEEEEeeeeeeecC
Confidence 5899999887 33445555543 378999963 11 22 222 334444554334445556666543
Q ss_pred ccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEe
Q 045079 499 EDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIH 548 (596)
Q Consensus 499 edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~ 548 (596)
.. + =.+||-+++ -..|..| +..+.||... |-|+|+-.++
T Consensus 147 pe-~---~DvivsE~~--~~~l~~e-----~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 147 PE-Q---VDAIVSEWM--GYGLLHE-----SMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp SS-C---EEEEECCCC--BTTBTTT-----CSHHHHHHHHHHHEEEEEEEE
T ss_pred Cc-c---ccEEEeecc--ccccccc-----chhhhHHHHHHhhCCCCceEC
Confidence 21 1 123332332 2334444 3467888887 5568887665
No 130
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=51.28 E-value=15 Score=37.53 Aligned_cols=104 Identities=13% Similarity=0.133 Sum_probs=57.5
Q ss_pred HHHHHhhh-hcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcE
Q 045079 406 QTIRKLAE-KATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPF 484 (596)
Q Consensus 406 qaIleA~~-g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPF 484 (596)
..|++.+. -...-+|+|+|.+.|. +...|+.+. |.+++|++|.| ..++ .|+... ..
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---~~~~~~~~D~~-------~~~~--------~a~~~~-~v 254 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGR----NLELIISKY---PLIKGINFDLP-------QVIE--------NAPPLS-GI 254 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECH-------HHHT--------TCCCCT-TE
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcH----HHHHHHHHC---CCCeEEEeChH-------HHHH--------hhhhcC-CC
Confidence 45666653 2345789999999985 344454443 46899999973 1222 233221 13
Q ss_pred EEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHH-hhCCcEEEe
Q 045079 485 EYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIK-RINPDVFIH 548 (596)
Q Consensus 485 eF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir-~L~P~Vfv~ 548 (596)
+|.. ....+ .+ ++ +=+|-|.+.|||+.|+. +..+|+.++ .|+|.-.++
T Consensus 255 ~~~~--~d~~~----~~---~~-~D~v~~~~~lh~~~d~~------~~~~l~~~~~~L~pgG~l~ 303 (372)
T 1fp1_D 255 EHVG--GDMFA----SV---PQ-GDAMILKAVCHNWSDEK------CIEFLSNCHKALSPNGKVI 303 (372)
T ss_dssp EEEE--CCTTT----CC---CC-EEEEEEESSGGGSCHHH------HHHHHHHHHHHEEEEEEEE
T ss_pred EEEe--CCccc----CC---CC-CCEEEEecccccCCHHH------HHHHHHHHHHhcCCCCEEE
Confidence 4332 12221 11 11 34555677789887642 236777774 569976443
No 131
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=50.98 E-value=94 Score=30.83 Aligned_cols=66 Identities=11% Similarity=0.158 Sum_probs=38.1
Q ss_pred HHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc-E
Q 045079 406 QTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP-F 484 (596)
Q Consensus 406 qaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP-F 484 (596)
..|++.+.-...-+|+|+|.+.|. +...|+.+ ++...++|||+.. .+.++.+.+++ +..|++ .
T Consensus 65 ~~l~~~l~~~~~~~VLDiGcG~G~----~~~~la~~--~~~~~~v~gvD~s------~~~~~~a~~~~----~~~g~~~v 128 (317)
T 1dl5_A 65 ALFMEWVGLDKGMRVLEIGGGTGY----NAAVMSRV--VGEKGLVVSVEYS------RKICEIAKRNV----ERLGIENV 128 (317)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSH----HHHHHHHH--HCTTCEEEEEESC------HHHHHHHHHHH----HHTTCCSE
T ss_pred HHHHHhcCCCCcCEEEEecCCchH----HHHHHHHh--cCCCCEEEEEECC------HHHHHHHHHHH----HHcCCCCe
Confidence 345555554556689999998874 33344433 2234689999973 34455444443 344554 4
Q ss_pred EEE
Q 045079 485 EYN 487 (596)
Q Consensus 485 eF~ 487 (596)
+|.
T Consensus 129 ~~~ 131 (317)
T 1dl5_A 129 IFV 131 (317)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 132
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=49.70 E-value=41 Score=32.17 Aligned_cols=56 Identities=13% Similarity=0.140 Sum_probs=33.6
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--EEEE
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP--FEYN 487 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP--FeF~ 487 (596)
+.-+|+|+|.+.|.--.. |+.+- |+..+||+||.. ...++.+. +.++..|++ .+|.
T Consensus 63 ~~~~VLdiG~G~G~~~~~----la~~~--~~~~~v~~vD~s------~~~~~~a~----~~~~~~g~~~~v~~~ 120 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIW----MAREL--PADGQLLTLEAD------AHHAQVAR----ENLQLAGVDQRVTLR 120 (248)
T ss_dssp TCSEEEEECCTTSHHHHH----HHTTS--CTTCEEEEEECC------HHHHHHHH----HHHHHTTCTTTEEEE
T ss_pred CCCEEEEecCCchHHHHH----HHHhC--CCCCEEEEEECC------HHHHHHHH----HHHHHcCCCCcEEEE
Confidence 345899999999854433 44332 335799999973 34454443 344455665 5554
No 133
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=49.56 E-value=47 Score=31.00 Aligned_cols=33 Identities=21% Similarity=0.346 Sum_probs=21.7
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecC
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIEL 455 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~ 455 (596)
..-+|+|+|.+.|.-=.. |+.+- |..+||+|+.
T Consensus 54 ~~~~vLdiG~G~G~~~~~----la~~~---~~~~v~~vD~ 86 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIR----MAQAL---PEATIVSIER 86 (233)
T ss_dssp CCSEEEEECCTTSHHHHH----HHHHC---TTCEEEEECC
T ss_pred CCCEEEEecCCCcHHHHH----HHHHC---CCCEEEEEEC
Confidence 445899999998853333 33322 2369999997
No 134
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=49.54 E-value=57 Score=33.35 Aligned_cols=135 Identities=7% Similarity=0.107 Sum_probs=69.4
Q ss_pred eeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcC-CcEEEEeecccccc
Q 045079 417 RLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFN-VPFEYNVIAQKWET 495 (596)
Q Consensus 417 ~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~g-VPFeF~~Ia~~~E~ 495 (596)
.-+|+|+|.+.|. +...|+++ +|..+||+|+.. ...++.+.+++..++..++ -.++|.. ..+.+
T Consensus 121 ~~~VLdIG~G~G~----~a~~la~~---~~~~~V~~VDis------~~~l~~Ar~~~~~~~~gl~~~rv~~~~--~D~~~ 185 (334)
T 1xj5_A 121 PKKVLVIGGGDGG----VLREVARH---ASIEQIDMCEID------KMVVDVSKQFFPDVAIGYEDPRVNLVI--GDGVA 185 (334)
T ss_dssp CCEEEEETCSSSH----HHHHHTTC---TTCCEEEEEESC------HHHHHHHHHHCHHHHGGGGSTTEEEEE--SCHHH
T ss_pred CCEEEEECCCccH----HHHHHHHc---CCCCEEEEEECC------HHHHHHHHHHHHhhccccCCCcEEEEE--CCHHH
Confidence 4589999999884 55666655 355799999973 3556666666665543331 2344432 22211
Q ss_pred cCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeeeecCCCCcchhHHHHHHHHHHHHHH
Q 045079 496 IRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGISNGTYNAPFFLARFREALFHFSAM 574 (596)
Q Consensus 496 i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e~n~~~nsp~F~~RF~EAL~~YSAl 574 (596)
. +..+.-..=++|++|+...++. .+. . -...+++.+ +.|+|.-+++...+.-+..+.. +.+.+.-...+
T Consensus 186 ~-l~~~~~~~fDlIi~d~~~p~~~-~~~-l----~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~---~~~~~~~l~~~ 255 (334)
T 1xj5_A 186 F-LKNAAEGSYDAVIVDSSDPIGP-AKE-L----FEKPFFQSVARALRPGGVVCTQAESLWLHMDI---IEDIVSNCREI 255 (334)
T ss_dssp H-HHTSCTTCEEEEEECCCCTTSG-GGG-G----GSHHHHHHHHHHEEEEEEEEEECCCTTTCHHH---HHHHHHHHHHH
T ss_pred H-HHhccCCCccEEEECCCCccCc-chh-h----hHHHHHHHHHHhcCCCcEEEEecCCccccHHH---HHHHHHHHHHh
Confidence 1 0001001124667665322211 110 0 013566665 6679998877654444444332 33344444455
Q ss_pred hh
Q 045079 575 FD 576 (596)
Q Consensus 575 FD 576 (596)
|.
T Consensus 256 F~ 257 (334)
T 1xj5_A 256 FK 257 (334)
T ss_dssp CS
T ss_pred Cc
Confidence 55
No 135
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=49.23 E-value=51 Score=32.54 Aligned_cols=41 Identities=17% Similarity=0.127 Sum_probs=27.7
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELP 456 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~p 456 (596)
.|++++.-...-+|+|+|.+.|.--..|.+. + -++||||..
T Consensus 19 ~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~-----~----~~v~~vD~~ 59 (285)
T 1zq9_A 19 SIIDKAALRPTDVVLEVGPGTGNMTVKLLEK-----A----KKVVACELD 59 (285)
T ss_dssp HHHHHTCCCTTCEEEEECCTTSTTHHHHHHH-----S----SEEEEEESC
T ss_pred HHHHhcCCCCCCEEEEEcCcccHHHHHHHhh-----C----CEEEEEECC
Confidence 4445554445568999999999765555543 2 289999973
No 136
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=48.99 E-value=13 Score=37.47 Aligned_cols=33 Identities=21% Similarity=0.205 Sum_probs=24.0
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecC
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIEL 455 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~ 455 (596)
..-+|+|+|.+.|. +...|+.+. |.+++|++|.
T Consensus 188 ~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~ 220 (352)
T 1fp2_A 188 GLESIVDVGGGTGT----TAKIICETF---PKLKCIVFDR 220 (352)
T ss_dssp TCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC
T ss_pred cCceEEEeCCCccH----HHHHHHHHC---CCCeEEEeeC
Confidence 44689999999994 444555443 4579999997
No 137
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=48.64 E-value=52 Score=32.78 Aligned_cols=41 Identities=15% Similarity=0.114 Sum_probs=27.6
Q ss_pred HHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecC
Q 045079 406 QTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIEL 455 (596)
Q Consensus 406 qaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~ 455 (596)
+.|++++.-...-.|+|+|.+.|.-- ..|+.+ + -++||||.
T Consensus 32 ~~i~~~~~~~~~~~VLDiG~G~G~lt----~~La~~-~----~~v~~vDi 72 (299)
T 2h1r_A 32 DKIIYAAKIKSSDIVLEIGCGTGNLT----VKLLPL-A----KKVITIDI 72 (299)
T ss_dssp HHHHHHHCCCTTCEEEEECCTTSTTH----HHHTTT-S----SEEEEECS
T ss_pred HHHHHhcCCCCcCEEEEEcCcCcHHH----HHHHhc-C----CEEEEEEC
Confidence 34555554445568999999998643 445555 2 38999997
No 138
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=48.12 E-value=39 Score=29.68 Aligned_cols=39 Identities=28% Similarity=0.240 Sum_probs=25.3
Q ss_pred HHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecC
Q 045079 408 IRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIEL 455 (596)
Q Consensus 408 IleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~ 455 (596)
+++.+.-.+.-+|+|+|.+.|. +...|+.+. .++|||+.
T Consensus 25 ~~~~~~~~~~~~vldiG~G~G~----~~~~l~~~~-----~~v~~~D~ 63 (192)
T 1l3i_A 25 IMCLAEPGKNDVAVDVGCGTGG----VTLELAGRV-----RRVYAIDR 63 (192)
T ss_dssp HHHHHCCCTTCEEEEESCTTSH----HHHHHHTTS-----SEEEEEES
T ss_pred HHHhcCCCCCCEEEEECCCCCH----HHHHHHHhc-----CEEEEEEC
Confidence 3444444455689999999874 333444432 58999997
No 139
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=47.66 E-value=77 Score=29.87 Aligned_cols=113 Identities=9% Similarity=0.072 Sum_probs=55.3
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc-EEEEeeccccc
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP-FEYNVIAQKWE 494 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP-FeF~~Ia~~~E 494 (596)
..-.|+|+|.+.|.-. ..||.+. |..+++|||.. ...++.+.+ .++..|++ ++|. ....+
T Consensus 34 ~~~~vLDiGcG~G~~~----~~lA~~~---p~~~v~giD~s------~~~l~~a~~----~~~~~~l~nv~~~--~~Da~ 94 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASL----VAMAKDR---PEQDFLGIEVH------SPGVGACLA----SAHEEGLSNLRVM--CHDAV 94 (218)
T ss_dssp CCCEEEEESCTTCHHH----HHHHHHC---TTSEEEEECSC------HHHHHHHHH----HHHHTTCSSEEEE--CSCHH
T ss_pred CCCeEEEEeeeChHHH----HHHHHHC---CCCeEEEEEec------HHHHHHHHH----HHHHhCCCcEEEE--ECCHH
Confidence 5557999999998543 3444432 45789999973 344554433 34455654 4443 22222
Q ss_pred ccCcccccccCCC--eEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeeee
Q 045079 495 TIRLEDFKIDRDE--VTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGIS 551 (596)
Q Consensus 495 ~i~~edL~i~~dE--~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e~ 551 (596)
++-.. .+.++. .|++|+..-.++.....-.. -...+|+.+ |.|+|.-.++...
T Consensus 95 ~~l~~--~~~~~~~d~v~~~~~~p~~~~~~~~rr~--~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 95 EVLHK--MIPDNSLRMVQLFFPDPWHKARHNKRRI--VQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp HHHHH--HSCTTCEEEEEEESCCCCCSGGGGGGSS--CSHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHH--HcCCCChheEEEeCCCCccchhhhhhhh--hhHHHHHHHHHHcCCCcEEEEEe
Confidence 21000 012232 34444221111111000000 013588877 5589999887655
No 140
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=47.01 E-value=22 Score=35.97 Aligned_cols=120 Identities=16% Similarity=0.131 Sum_probs=62.6
Q ss_pred hHHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcE
Q 045079 405 NQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPF 484 (596)
Q Consensus 405 NqaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPF 484 (596)
.+.|++.+.....-+|+|+|.+.|.--. .|+.+ + |..++||||.. ...++.+.+++ +..++..
T Consensus 185 ~~~ll~~l~~~~~~~VLDlGcG~G~~~~----~la~~--~-~~~~v~~vD~s------~~~l~~a~~~~----~~~~~~~ 247 (343)
T 2pjd_A 185 SQLLLSTLTPHTKGKVLDVGCGAGVLSV----AFARH--S-PKIRLTLCDVS------APAVEASRATL----AANGVEG 247 (343)
T ss_dssp HHHHHHHSCTTCCSBCCBTTCTTSHHHH----HHHHH--C-TTCBCEEEESB------HHHHHHHHHHH----HHTTCCC
T ss_pred HHHHHHhcCcCCCCeEEEecCccCHHHH----HHHHH--C-CCCEEEEEECC------HHHHHHHHHHH----HHhCCCC
Confidence 4566666643334479999999886333 33333 2 45689999973 34455554444 3356665
Q ss_pred EEEeecccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeeeecC
Q 045079 485 EYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGISNG 553 (596)
Q Consensus 485 eF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e~n~ 553 (596)
+|. .....+. . -..=++|+.|..| |+..... ......+|+.+ |-|+|.-.++...+.
T Consensus 248 ~~~--~~d~~~~----~-~~~fD~Iv~~~~~--~~g~~~~---~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 248 EVF--ASNVFSE----V-KGRFDMIISNPPF--HDGMQTS---LDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp EEE--ECSTTTT----C-CSCEEEEEECCCC--CSSSHHH---HHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred EEE--Ecccccc----c-cCCeeEEEECCCc--ccCccCC---HHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 552 2222111 1 0111355555544 4322110 01234566666 557999877666543
No 141
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=46.98 E-value=36 Score=33.26 Aligned_cols=42 Identities=21% Similarity=0.287 Sum_probs=29.6
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELP 456 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~p 456 (596)
.|++++.-...-+|+|+|.|.|. |...|+.++ .-++|||+..
T Consensus 22 ~iv~~~~~~~~~~VLDiG~G~G~----lt~~L~~~~----~~~v~avEid 63 (249)
T 3ftd_A 22 KIAEELNIEEGNTVVEVGGGTGN----LTKVLLQHP----LKKLYVIELD 63 (249)
T ss_dssp HHHHHTTCCTTCEEEEEESCHHH----HHHHHTTSC----CSEEEEECCC
T ss_pred HHHHhcCCCCcCEEEEEcCchHH----HHHHHHHcC----CCeEEEEECC
Confidence 34555544455689999999874 677787762 3589999973
No 142
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=46.98 E-value=15 Score=37.29 Aligned_cols=43 Identities=16% Similarity=0.155 Sum_probs=27.8
Q ss_pred HHHHhh--hhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 045079 407 TIRKLA--EKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELP 456 (596)
Q Consensus 407 aIleA~--~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~p 456 (596)
.|++.+ .-...-+|+|+|.+.|. +...|+.+. |.+++|++|.|
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~ 226 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGG----VTKLIHEIF---PHLKCTVFDQP 226 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSH----HHHHHHHHC---TTSEEEEEECH
T ss_pred HHHHhcchhccCCCEEEEECCCcCH----HHHHHHHHC---CCCeEEEeccH
Confidence 455554 11344689999999985 344444443 46799999973
No 143
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=46.92 E-value=82 Score=28.20 Aligned_cols=34 Identities=18% Similarity=0.157 Sum_probs=22.7
Q ss_pred cCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 045079 415 ATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELP 456 (596)
Q Consensus 415 ~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~p 456 (596)
...-+|+|+|.+.|.- ...|+.+ |+. ++||||..
T Consensus 41 ~~~~~vLdiGcG~G~~----~~~l~~~--~~~--~v~~~D~s 74 (215)
T 2pxx_A 41 RPEDRILVLGCGNSAL----SYELFLG--GFP--NVTSVDYS 74 (215)
T ss_dssp CTTCCEEEETCTTCSH----HHHHHHT--TCC--CEEEEESC
T ss_pred CCCCeEEEECCCCcHH----HHHHHHc--CCC--cEEEEeCC
Confidence 3456899999998853 3344444 333 89999973
No 144
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=46.75 E-value=1.7e+02 Score=30.77 Aligned_cols=95 Identities=16% Similarity=0.167 Sum_probs=55.6
Q ss_pred eeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeeccccccc
Q 045079 417 RLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETI 496 (596)
Q Consensus 417 ~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E~i 496 (596)
.-.|+|+|.+.|.- ...||.+ + -+++|||.. .+.++.+.++ |+..|+..+|. ..+++++
T Consensus 291 ~~~VLDlgcG~G~~----sl~la~~-~----~~V~gvD~s------~~ai~~A~~n----~~~ngl~v~~~--~~d~~~~ 349 (425)
T 2jjq_A 291 GEKILDMYSGVGTF----GIYLAKR-G----FNVKGFDSN------EFAIEMARRN----VEINNVDAEFE--VASDREV 349 (425)
T ss_dssp SSEEEEETCTTTHH----HHHHHHT-T----CEEEEEESC------HHHHHHHHHH----HHHHTCCEEEE--ECCTTTC
T ss_pred CCEEEEeeccchHH----HHHHHHc-C----CEEEEEECC------HHHHHHHHHH----HHHcCCcEEEE--ECChHHc
Confidence 34789999998843 3345554 2 389999973 3445554443 34456664443 3344433
Q ss_pred CcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHHhhCCcEEEee
Q 045079 497 RLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHG 549 (596)
Q Consensus 497 ~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir~L~P~Vfv~~ 549 (596)
... .=++|++|-.+. .....++..|+.++|+-++.+
T Consensus 350 ~~~-----~fD~Vv~dPPr~------------g~~~~~~~~l~~l~p~givyv 385 (425)
T 2jjq_A 350 SVK-----GFDTVIVDPPRA------------GLHPRLVKRLNREKPGVIVYV 385 (425)
T ss_dssp CCT-----TCSEEEECCCTT------------CSCHHHHHHHHHHCCSEEEEE
T ss_pred Ccc-----CCCEEEEcCCcc------------chHHHHHHHHHhcCCCcEEEE
Confidence 221 224666653210 112469999999999987766
No 145
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=46.46 E-value=83 Score=29.35 Aligned_cols=106 Identities=8% Similarity=0.078 Sum_probs=53.1
Q ss_pred cCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeeccccc
Q 045079 415 ATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWE 494 (596)
Q Consensus 415 ~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E 494 (596)
...-+|+|+|.+.|. +...|+.+. + -++||||.. ...++.+. +.++..+...+| +...++
T Consensus 59 ~~~~~vLDiGcGtG~----~~~~l~~~~---~-~~v~gvD~s------~~~l~~a~----~~~~~~~~~v~~--~~~d~~ 118 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAI----AASKVQEAP---I-DEHWIIECN------DGVFQRLR----DWAPRQTHKVIP--LKGLWE 118 (236)
T ss_dssp TTCEEEEEECCTTSH----HHHHHHTSC---E-EEEEEEECC------HHHHHHHH----HHGGGCSSEEEE--EESCHH
T ss_pred CCCCeEEEEeccCCH----HHHHHHhcC---C-CeEEEEcCC------HHHHHHHH----HHHHhcCCCeEE--EecCHH
Confidence 356789999999983 334444432 2 289999973 23344333 344455544444 334444
Q ss_pred ccCcccccccCC--CeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEe
Q 045079 495 TIRLEDFKIDRD--EVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIH 548 (596)
Q Consensus 495 ~i~~edL~i~~d--E~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~ 548 (596)
++.. .+..+ ++|+.+ .|.+ +..+.. ..-++.+|+.+ |-|+|.-.++
T Consensus 119 ~~~~---~~~~~~fD~V~~d-~~~~-~~~~~~---~~~~~~~l~~~~r~LkpgG~l~ 167 (236)
T 1zx0_A 119 DVAP---TLPDGHFDGILYD-TYPL-SEETWH---THQFNFIKNHAFRLLKPGGVLT 167 (236)
T ss_dssp HHGG---GSCTTCEEEEEEC-CCCC-BGGGTT---THHHHHHHHTHHHHEEEEEEEE
T ss_pred Hhhc---ccCCCceEEEEEC-Cccc-chhhhh---hhhHHHHHHHHHHhcCCCeEEE
Confidence 4310 12222 233331 3333 222111 01234666655 5679998665
No 146
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=46.22 E-value=1e+02 Score=32.40 Aligned_cols=107 Identities=10% Similarity=0.086 Sum_probs=58.7
Q ss_pred HHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc-EEEE
Q 045079 409 RKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP-FEYN 487 (596)
Q Consensus 409 leA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP-FeF~ 487 (596)
++.+.-...-+|+|+|.+.|.-- ..||.+ + -+++|||.. .+.++.+.++ |+..|++ .+|.
T Consensus 279 ~~~l~~~~~~~VLDlgcG~G~~~----~~la~~-~----~~V~gvD~s------~~al~~A~~n----~~~~~~~~v~f~ 339 (433)
T 1uwv_A 279 LEWLDVQPEDRVLDLFCGMGNFT----LPLATQ-A----ASVVGVEGV------PALVEKGQQN----ARLNGLQNVTFY 339 (433)
T ss_dssp HHHHTCCTTCEEEEESCTTTTTH----HHHHTT-S----SEEEEEESC------HHHHHHHHHH----HHHTTCCSEEEE
T ss_pred HHhhcCCCCCEEEECCCCCCHHH----HHHHhh-C----CEEEEEeCC------HHHHHHHHHH----HHHcCCCceEEE
Confidence 34443233457999999988533 335554 2 489999973 3445554443 3445664 5554
Q ss_pred eecccccccCcc-cccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHHhhCCcEEEee
Q 045079 488 VIAQKWETIRLE-DFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHG 549 (596)
Q Consensus 488 ~Ia~~~E~i~~e-dL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir~L~P~Vfv~~ 549 (596)
. .++++.-.. .+.-..=++|++|-.+. ..+.+++.|.+++|+.+|.+
T Consensus 340 ~--~d~~~~l~~~~~~~~~fD~Vv~dPPr~-------------g~~~~~~~l~~~~p~~ivyv 387 (433)
T 1uwv_A 340 H--ENLEEDVTKQPWAKNGFDKVLLDPARA-------------GAAGVMQQIIKLEPIRIVYV 387 (433)
T ss_dssp E--CCTTSCCSSSGGGTTCCSEEEECCCTT-------------CCHHHHHHHHHHCCSEEEEE
T ss_pred E--CCHHHHhhhhhhhcCCCCEEEECCCCc-------------cHHHHHHHHHhcCCCeEEEE
Confidence 3 333331110 01111224666652211 12468999999999998865
No 147
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=45.75 E-value=37 Score=33.89 Aligned_cols=99 Identities=17% Similarity=0.174 Sum_probs=53.9
Q ss_pred cccchhhhH-HHHhH----HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHH
Q 045079 393 AWPFIRMSY-LFANQ----TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVE 467 (596)
Q Consensus 393 ~~Pf~kfa~-~~ANq----aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~le 467 (596)
.-|=.+++. |..++ .|++++.-... +|+|+|.|.|. |-..|+.+. -++|||+... +.++
T Consensus 19 ~~~~k~~GQnfL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~----lt~~L~~~~-----~~V~avEid~------~~~~ 82 (271)
T 3fut_A 19 LFADKRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGA----LTRALLEAG-----AEVTAIEKDL------RLRP 82 (271)
T ss_dssp CCCSTTSSCCEECCHHHHHHHHHHHCCCCS-CEEEECCTTSH----HHHHHHHTT-----CCEEEEESCG------GGHH
T ss_pred CCccccCCccccCCHHHHHHHHHhcCCCCC-eEEEEeCchHH----HHHHHHHcC-----CEEEEEECCH------HHHH
Confidence 445555554 33344 45555554556 99999999884 666777663 3799999742 2343
Q ss_pred HHHHHHHHHHhhcCCcEEEEeecccccccCcccccccCCCeEEEEeeccc
Q 045079 468 ETGNRLKSYCERFNVPFEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRM 517 (596)
Q Consensus 468 etG~rL~~~A~~~gVPFeF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~L 517 (596)
.+.+++. +-.++ .+.....++...++. ....||-|..|..
T Consensus 83 ~l~~~~~------~~~v~--vi~~D~l~~~~~~~~--~~~~iv~NlPy~i 122 (271)
T 3fut_A 83 VLEETLS------GLPVR--LVFQDALLYPWEEVP--QGSLLVANLPYHI 122 (271)
T ss_dssp HHHHHTT------TSSEE--EEESCGGGSCGGGSC--TTEEEEEEECSSC
T ss_pred HHHHhcC------CCCEE--EEECChhhCChhhcc--CccEEEecCcccc
Confidence 3333332 12233 333344444433321 2346777877753
No 148
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=45.70 E-value=19 Score=34.96 Aligned_cols=103 Identities=16% Similarity=0.152 Sum_probs=55.9
Q ss_pred cCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc-EEEEeecccc
Q 045079 415 ATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP-FEYNVIAQKW 493 (596)
Q Consensus 415 ~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP-FeF~~Ia~~~ 493 (596)
...-+|+|+|.+.|+---.|.+.. |..+||+||.. ...++. +.+-++.+|+. .+| +..++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~-------~~~~v~~vD~s------~~~~~~----a~~~~~~~~l~~v~~--~~~d~ 139 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVR-------PELELVLVDAT------RKKVAF----VERAIEVLGLKGARA--LWGRA 139 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHC-------TTCEEEEEESC------HHHHHH----HHHHHHHHTCSSEEE--EECCH
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHC-------CCCEEEEEECC------HHHHHH----HHHHHHHhCCCceEE--EECcH
Confidence 345689999999997544433321 45799999973 234443 33445556764 444 33455
Q ss_pred cccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeee
Q 045079 494 ETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGI 550 (596)
Q Consensus 494 E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e 550 (596)
+++...+..-..=++|+.+.+ .+.+.++..+ +-|+|.-.++..
T Consensus 140 ~~~~~~~~~~~~fD~I~s~a~--------------~~~~~ll~~~~~~LkpgG~l~~~ 183 (249)
T 3g89_A 140 EVLAREAGHREAYARAVARAV--------------APLCVLSELLLPFLEVGGAAVAM 183 (249)
T ss_dssp HHHTTSTTTTTCEEEEEEESS--------------CCHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHhhcccccCCCceEEEECCc--------------CCHHHHHHHHHHHcCCCeEEEEE
Confidence 555432110011134444321 2346778777 456898765543
No 149
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=45.08 E-value=19 Score=34.39 Aligned_cols=105 Identities=10% Similarity=0.066 Sum_probs=56.5
Q ss_pred cCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeeccccc
Q 045079 415 ATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWE 494 (596)
Q Consensus 415 ~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E 494 (596)
...-+|+|+|.+.|. +...|+++. | -++|||+.. .+.+ ++..+.++..+....+. ...|+
T Consensus 59 ~~G~rVLdiG~G~G~----~~~~~~~~~---~-~~v~~id~~------~~~~----~~a~~~~~~~~~~~~~~--~~~a~ 118 (236)
T 3orh_A 59 SKGGRVLEVGFGMAI----AASKVQEAP---I-DEHWIIECN------DGVF----QRLRDWAPRQTHKVIPL--KGLWE 118 (236)
T ss_dssp TTCEEEEEECCTTSH----HHHHHTTSC---E-EEEEEEECC------HHHH----HHHHHHGGGCSSEEEEE--ESCHH
T ss_pred cCCCeEEEECCCccH----HHHHHHHhC---C-cEEEEEeCC------HHHH----HHHHHHHhhCCCceEEE--eehHH
Confidence 345689999999883 334455442 2 378999973 2233 34455666667665553 23444
Q ss_pred ccCcccccccCCCeEEE---EeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEe
Q 045079 495 TIRLEDFKIDRDEVTVV---NCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIH 548 (596)
Q Consensus 495 ~i~~edL~i~~dE~LaV---N~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~ 548 (596)
.+... +.-..=+++.. -+.+.++|+.| +..+|+.+ |-|+|.-+..
T Consensus 119 ~~~~~-~~~~~FD~i~~D~~~~~~~~~~~~~--------~~~~~~e~~rvLkPGG~l~ 167 (236)
T 3orh_A 119 DVAPT-LPDGHFDGILYDTYPLSEETWHTHQ--------FNFIKNHAFRLLKPGGVLT 167 (236)
T ss_dssp HHGGG-SCTTCEEEEEECCCCCBGGGTTTHH--------HHHHHHTHHHHEEEEEEEE
T ss_pred hhccc-ccccCCceEEEeeeecccchhhhcc--------hhhhhhhhhheeCCCCEEE
Confidence 43221 11001123332 23455566554 35677755 5679987543
No 150
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=44.84 E-value=58 Score=30.68 Aligned_cols=101 Identities=14% Similarity=0.191 Sum_probs=53.0
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc-EEEEeeccccc
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP-FEYNVIAQKWE 494 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP-FeF~~Ia~~~E 494 (596)
..-+|+|+|.+.|.-=.. |+.+. |..++||||.. ...++.+ .+.++..|++ ++|. ...++
T Consensus 70 ~~~~vLDiG~G~G~~~~~----la~~~---~~~~v~~vD~s------~~~~~~a----~~~~~~~~~~~v~~~--~~d~~ 130 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLP----IKICF---PHLHVTIVDSL------NKRITFL----EKLSEALQLENTTFC--HDRAE 130 (240)
T ss_dssp GCCEEEEECSSSCTTHHH----HHHHC---TTCEEEEEESC------HHHHHHH----HHHHHHHTCSSEEEE--ESCHH
T ss_pred CCCEEEEecCCCCHHHHH----HHHhC---CCCEEEEEeCC------HHHHHHH----HHHHHHcCCCCEEEE--eccHH
Confidence 345899999998863222 22211 33689999973 2334433 3344555664 4443 33444
Q ss_pred ccCcc-cccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeee
Q 045079 495 TIRLE-DFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGI 550 (596)
Q Consensus 495 ~i~~e-dL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e 550 (596)
++... .+. ..=++|+.+. + .....+|+.+ +-|+|.-.++..
T Consensus 131 ~~~~~~~~~-~~fD~V~~~~------~--------~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 131 TFGQRKDVR-ESYDIVTARA------V--------ARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp HHTTCTTTT-TCEEEEEEEC------C--------SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred Hhccccccc-CCccEEEEec------c--------CCHHHHHHHHHHhcCCCCEEEEE
Confidence 44321 000 0112333322 1 1256788887 667998766554
No 151
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=43.79 E-value=1.2e+02 Score=28.94 Aligned_cols=115 Identities=14% Similarity=0.137 Sum_probs=57.0
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--EEEEeecccc
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP--FEYNVIAQKW 493 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP--FeF~~Ia~~~ 493 (596)
+.-.|+|+|.+.|. +...|+.+. + . +|||||.. ...++.+.++ ++..++. ++| +...+
T Consensus 49 ~~~~vLDlG~G~G~----~~~~la~~~--~-~-~v~gvDi~------~~~~~~a~~n----~~~~~~~~~v~~--~~~D~ 108 (259)
T 3lpm_A 49 RKGKIIDLCSGNGI----IPLLLSTRT--K-A-KIVGVEIQ------ERLADMAKRS----VAYNQLEDQIEI--IEYDL 108 (259)
T ss_dssp SCCEEEETTCTTTH----HHHHHHTTC--C-C-EEEEECCS------HHHHHHHHHH----HHHTTCTTTEEE--ECSCG
T ss_pred CCCEEEEcCCchhH----HHHHHHHhc--C-C-cEEEEECC------HHHHHHHHHH----HHHCCCcccEEE--EECcH
Confidence 45689999999984 444666663 2 2 99999973 2344444333 3445554 444 33333
Q ss_pred cccCcccccccCCCeEEEEeecccc---CCCCCCc--CC-----CCcHHHHHHHH-HhhCCcEEEeeee
Q 045079 494 ETIRLEDFKIDRDEVTVVNCVHRMK---NLPDDTV--VD-----SSPRDAVLDLI-KRINPDVFIHGIS 551 (596)
Q Consensus 494 E~i~~edL~i~~dE~LaVN~~f~Lh---~L~Desv--~~-----~spRd~vL~~I-r~L~P~Vfv~~e~ 551 (596)
.++.. .+.-..=++|+.|-.|.-. ++..... .. ....+.+|..+ +-|+|.-.++.+.
T Consensus 109 ~~~~~-~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 109 KKITD-LIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp GGGGG-TSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHhhh-hhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE
Confidence 33321 1111122578888666432 2221100 00 01234566665 5579987766643
No 152
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=43.76 E-value=1.9e+02 Score=29.89 Aligned_cols=111 Identities=18% Similarity=0.156 Sum_probs=59.8
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeecccccc
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWET 495 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E~ 495 (596)
+.-+|+|+|.+.|.- ...|+.+ | .+|||||.. ...++.+.+++ +..++..+|.. ..+.+
T Consensus 233 ~~~~VLDlGcG~G~~----~~~la~~--g---~~V~gvDis------~~al~~A~~n~----~~~~~~v~~~~--~D~~~ 291 (381)
T 3dmg_A 233 RGRQVLDLGAGYGAL----TLPLARM--G---AEVVGVEDD------LASVLSLQKGL----EANALKAQALH--SDVDE 291 (381)
T ss_dssp TTCEEEEETCTTSTT----HHHHHHT--T---CEEEEEESB------HHHHHHHHHHH----HHTTCCCEEEE--CSTTT
T ss_pred CCCEEEEEeeeCCHH----HHHHHHc--C---CEEEEEECC------HHHHHHHHHHH----HHcCCCeEEEE--cchhh
Confidence 456899999999853 3334444 2 399999973 34455554443 44566655543 33332
Q ss_pred cCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHH-HHhhCCcEEEeeeecCCC
Q 045079 496 IRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDL-IKRINPDVFIHGISNGTY 555 (596)
Q Consensus 496 i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~-Ir~L~P~Vfv~~e~n~~~ 555 (596)
....+ ..=++|+.|..| |+..... ..-...+|+. .+.|+|.-.++.+.+...
T Consensus 292 ~~~~~---~~fD~Ii~npp~--~~~~~~~---~~~~~~~l~~~~~~LkpGG~l~iv~n~~l 344 (381)
T 3dmg_A 292 ALTEE---ARFDIIVTNPPF--HVGGAVI---LDVAQAFVNVAAARLRPGGVFFLVSNPFL 344 (381)
T ss_dssp TSCTT---CCEEEEEECCCC--CTTCSSC---CHHHHHHHHHHHHHEEEEEEEEEEECTTS
T ss_pred ccccC---CCeEEEEECCch--hhccccc---HHHHHHHHHHHHHhcCcCcEEEEEEcCCC
Confidence 22211 112466666555 3322111 0112345554 567799988777665443
No 153
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=39.76 E-value=41 Score=27.40 Aligned_cols=36 Identities=25% Similarity=0.499 Sum_probs=25.9
Q ss_pred CCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEE
Q 045079 444 GPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYN 487 (596)
Q Consensus 444 GPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~ 487 (596)
.--.+||||+ |.+.-.|....-.+.|+.||+-.-|.
T Consensus 40 ndleiritgv--------peqvrkelakeaerlakefnitvtyt 75 (85)
T 2kl8_A 40 NDLEIRITGV--------PEQVRKELAKEAERLAKEFNITVTYT 75 (85)
T ss_dssp SCEEEEEESC--------CHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CeeEEEEecC--------hHHHHHHHHHHHHHHHHhcCeEEEEE
Confidence 3458999999 44545666666667788899888774
No 154
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=38.54 E-value=76 Score=29.18 Aligned_cols=106 Identities=13% Similarity=0.053 Sum_probs=55.2
Q ss_pred eeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCC---cEEEEeecccc
Q 045079 417 RLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNV---PFEYNVIAQKW 493 (596)
Q Consensus 417 ~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gV---PFeF~~Ia~~~ 493 (596)
.-.|+|+|.+.|.-- +. ++.+ |. -++||||.. .+.++.+.+++ +..|+ ..+|.. ..+
T Consensus 54 ~~~vLDlGcGtG~~~---~~-~~~~--~~--~~v~gvD~s------~~~l~~a~~~~----~~~~~~~~~v~~~~--~d~ 113 (201)
T 2ift_A 54 QSECLDGFAGSGSLG---FE-ALSR--QA--KKVTFLELD------KTVANQLKKNL----QTLKCSSEQAEVIN--QSS 113 (201)
T ss_dssp TCEEEETTCTTCHHH---HH-HHHT--TC--SEEEEECSC------HHHHHHHHHHH----HHTTCCTTTEEEEC--SCH
T ss_pred CCeEEEcCCccCHHH---HH-HHHc--cC--CEEEEEECC------HHHHHHHHHHH----HHhCCCccceEEEE--CCH
Confidence 347999999988422 22 2333 21 489999973 34455544443 34455 344432 222
Q ss_pred cccCcccccccC-CCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHHh---hCCcEEEeeeecCC
Q 045079 494 ETIRLEDFKIDR-DEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKR---INPDVFIHGISNGT 554 (596)
Q Consensus 494 E~i~~edL~i~~-dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir~---L~P~Vfv~~e~n~~ 554 (596)
+++... +.-.. =++|+.|..|. . .-...+|..+.+ |+|.-+++...+..
T Consensus 114 ~~~~~~-~~~~~~fD~I~~~~~~~----~-------~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 114 LDFLKQ-PQNQPHFDVVFLDPPFH----F-------NLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp HHHTTS-CCSSCCEEEEEECCCSS----S-------CHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred HHHHHh-hccCCCCCEEEECCCCC----C-------ccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 222110 00011 13566665542 1 124578888866 89987766555443
No 155
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=37.72 E-value=1.6e+02 Score=27.53 Aligned_cols=56 Identities=20% Similarity=0.177 Sum_probs=33.5
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHH
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLK 474 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~ 474 (596)
.|++.+.-...-+|+|+|.+.|.--..|.+.+ .|..+++|||.. .+.++.+.+++.
T Consensus 84 ~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~------~~~~~v~~~D~~------~~~~~~a~~~~~ 139 (255)
T 3mb5_A 84 LIVAYAGISPGDFIVEAGVGSGALTLFLANIV------GPEGRVVSYEIR------EDFAKLAWENIK 139 (255)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEECSC------HHHHHHHHHHHH
T ss_pred HHHHhhCCCCCCEEEEecCCchHHHHHHHHHh------CCCeEEEEEecC------HHHHHHHHHHHH
Confidence 34445544455689999999985433333333 134689999973 345555544443
No 156
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=37.33 E-value=32 Score=30.92 Aligned_cols=42 Identities=17% Similarity=0.280 Sum_probs=27.9
Q ss_pred HHHhhhh-cCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 045079 408 IRKLAEK-ATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELP 456 (596)
Q Consensus 408 IleA~~g-~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~p 456 (596)
+++.+.. .+..+|+|+|.+.|.--. .|+.+. |..++||||..
T Consensus 21 ~~~~l~~~~~~~~vLDiG~G~G~~~~----~l~~~~---~~~~v~~vD~~ 63 (215)
T 4dzr_A 21 AIRFLKRMPSGTRVIDVGTGSGCIAV----SIALAC---PGVSVTAVDLS 63 (215)
T ss_dssp HHHHHTTCCTTEEEEEEESSBCHHHH----HHHHHC---TTEEEEEEECC
T ss_pred HHHHhhhcCCCCEEEEecCCHhHHHH----HHHHhC---CCCeEEEEECC
Confidence 3444444 567899999999995333 333331 45799999974
No 157
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=36.77 E-value=2.3e+02 Score=28.16 Aligned_cols=133 Identities=10% Similarity=0.154 Sum_probs=66.2
Q ss_pred eeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhc-CCcEEEEeecccccc
Q 045079 417 RLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERF-NVPFEYNVIAQKWET 495 (596)
Q Consensus 417 ~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~-gVPFeF~~Ia~~~E~ 495 (596)
.-+|+|+|.+.|. +...|+++. |..+||+|+.. .+.++.+.+++...+..+ .-.+++.. ....+
T Consensus 96 ~~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDid------~~~i~~ar~~~~~~~~~~~~~rv~v~~--~Da~~ 160 (304)
T 2o07_A 96 PRKVLIIGGGDGG----VLREVVKHP---SVESVVQCEID------EDVIQVSKKFLPGMAIGYSSSKLTLHV--GDGFE 160 (304)
T ss_dssp CCEEEEEECTTSH----HHHHHTTCT---TCCEEEEEESC------HHHHHHHHHHCHHHHGGGGCTTEEEEE--SCHHH
T ss_pred CCEEEEECCCchH----HHHHHHHcC---CCCEEEEEECC------HHHHHHHHHHhHHhhcccCCCcEEEEE--CcHHH
Confidence 3589999999883 555666552 45799999973 355666666666554433 22244432 11111
Q ss_pred -cCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeeeecCCCCcchhHHHHHHHHHHHHH
Q 045079 496 -IRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGISNGTYNAPFFLARFREALFHFSA 573 (596)
Q Consensus 496 -i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e~n~~~nsp~F~~RF~EAL~~YSA 573 (596)
+.. . -..=++|++++..... ..+.. -...+++.+ +.|+|+-+++.....-+..+....+. ..+...
T Consensus 161 ~l~~--~-~~~fD~Ii~d~~~~~~--~~~~l----~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~---~~~l~~ 228 (304)
T 2o07_A 161 FMKQ--N-QDAFDVIITDSSDPMG--PAESL----FKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEM---RQFCQS 228 (304)
T ss_dssp HHHT--C-SSCEEEEEEECC-----------------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHH---HHHHHH
T ss_pred HHhh--C-CCCceEEEECCCCCCC--cchhh----hHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHH---HHHHHH
Confidence 110 0 0112567776543211 11000 013566665 66799988776543333333333333 334444
Q ss_pred Hhh
Q 045079 574 MFD 576 (596)
Q Consensus 574 lFD 576 (596)
+|.
T Consensus 229 ~f~ 231 (304)
T 2o07_A 229 LFP 231 (304)
T ss_dssp HCS
T ss_pred hCC
Confidence 554
No 158
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=36.72 E-value=64 Score=29.63 Aligned_cols=56 Identities=11% Similarity=0.140 Sum_probs=33.1
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--EEEE
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP--FEYN 487 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP--FeF~ 487 (596)
+.-+|+|+|.+.|.--. .|+.+- |+..+||+|+.. ...++.+.++ ++..|+. .+|.
T Consensus 64 ~~~~vLdiG~G~G~~~~----~la~~~--~~~~~v~~vD~~------~~~~~~a~~~----~~~~~~~~~v~~~ 121 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAI----AMGLAL--PKDGTLITCDVD------EKSTALAKEY----WEKAGLSDKIGLR 121 (225)
T ss_dssp TCSEEEEECCTTSHHHH----HHHTTC--CTTCEEEEEESC------HHHHHHHHHH----HHHTTCTTTEEEE
T ss_pred CCCEEEEeCCcchHHHH----HHHHhC--CCCCEEEEEeCC------HHHHHHHHHH----HHHCCCCCceEEE
Confidence 33489999999885333 344332 235799999973 3445544433 4445654 5554
No 159
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=35.61 E-value=96 Score=33.18 Aligned_cols=118 Identities=14% Similarity=0.156 Sum_probs=60.7
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHH---HHHHHHHHhhcCCc
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEET---GNRLKSYCERFNVP 483 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leet---G~rL~~~A~~~gVP 483 (596)
.|++.+.-...-.|+|+|.|.|.+-..|.+.. +..+++||+.. ...++.+ -.++.+-++.+|+.
T Consensus 233 ~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~-------g~~~V~GVDis------~~~l~~A~~Ml~~ar~~~~~~Gl~ 299 (433)
T 1u2z_A 233 DVYQQCQLKKGDTFMDLGSGVGNCVVQAALEC-------GCALSFGCEIM------DDASDLTILQYEELKKRCKLYGMR 299 (433)
T ss_dssp HHHHHTTCCTTCEEEEESCTTSHHHHHHHHHH-------CCSEEEEEECC------HHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHC-------CCCEEEEEeCC------HHHHHHHHHhHHHHHHHHHHcCCC
Confidence 34555544455689999999987655544432 12489999974 2334333 23334445566742
Q ss_pred ---EEEEeecccccccCcccc--cccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHHhhCCcEEEeee
Q 045079 484 ---FEYNVIAQKWETIRLEDF--KIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGI 550 (596)
Q Consensus 484 ---FeF~~Ia~~~E~i~~edL--~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir~L~P~Vfv~~e 550 (596)
++|.. ...++. ...+ ...+=++|++|... + .. .+...+-...+.|+|.-.+++.
T Consensus 300 ~~nV~~i~-gD~~~~--~~~~~~~~~~FDvIvvn~~l-~----~~-----d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 300 LNNVEFSL-KKSFVD--NNRVAELIPQCDVILVNNFL-F----DE-----DLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp CCCEEEEE-SSCSTT--CHHHHHHGGGCSEEEECCTT-C----CH-----HHHHHHHHHHTTCCTTCEEEES
T ss_pred CCceEEEE-cCcccc--ccccccccCCCCEEEEeCcc-c----cc-----cHHHHHHHHHHhCCCCeEEEEe
Confidence 55532 111211 0001 01233577776432 1 11 1223444556788998766543
No 160
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=35.32 E-value=1.5e+02 Score=27.19 Aligned_cols=41 Identities=7% Similarity=0.176 Sum_probs=26.1
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELP 456 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~p 456 (596)
.|++.+.-...-+|+|+|.+.|.--.. |+.+. .++|||+..
T Consensus 61 ~~~~~~~~~~~~~vLdiG~G~G~~~~~----l~~~~-----~~v~~vD~~ 101 (231)
T 1vbf_A 61 FMLDELDLHKGQKVLEIGTGIGYYTAL----IAEIV-----DKVVSVEIN 101 (231)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHH----HHHHS-----SEEEEEESC
T ss_pred HHHHhcCCCCCCEEEEEcCCCCHHHHH----HHHHc-----CEEEEEeCC
Confidence 344555444556899999998864333 33321 489999973
No 161
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=35.18 E-value=1.8e+02 Score=26.53 Aligned_cols=57 Identities=19% Similarity=0.287 Sum_probs=34.8
Q ss_pred HHHHhhh--hcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHH
Q 045079 407 TIRKLAE--KATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKS 475 (596)
Q Consensus 407 aIleA~~--g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~ 475 (596)
.+++.+. -...-+|+|+|.+.|..-..|.+.+ | |..++||||.. ...++.+.+++.+
T Consensus 66 ~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~-----~-~~~~v~~vD~s------~~~~~~a~~~~~~ 124 (226)
T 1i1n_A 66 YALELLFDQLHEGAKALDVGSGSGILTACFARMV-----G-CTGKVIGIDHI------KELVDDSVNNVRK 124 (226)
T ss_dssp HHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHH-----C-TTCEEEEEESC------HHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHh-----C-CCcEEEEEeCC------HHHHHHHHHHHHh
Confidence 3445553 2345689999999886554444443 1 34589999973 3456555555443
No 162
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=33.86 E-value=59 Score=30.77 Aligned_cols=55 Identities=11% Similarity=0.126 Sum_probs=33.0
Q ss_pred HHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHH
Q 045079 409 RKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLK 474 (596)
Q Consensus 409 leA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~ 474 (596)
++.+.+.....|+|+|.+.|. +...|+.+- ..|..+|||||.. ...++.+.+++.
T Consensus 44 l~~~~~~~~~~vLD~gcGsG~----~~~~la~~~-~~~~~~v~gvDis------~~~l~~A~~~~~ 98 (250)
T 1o9g_A 44 LARLPGDGPVTLWDPCCGSGY----LLTVLGLLH-RRSLRQVIASDVD------PAPLELAAKNLA 98 (250)
T ss_dssp HHTSSCCSCEEEEETTCTTSH----HHHHHHHHT-GGGEEEEEEEESC------HHHHHHHHHHHH
T ss_pred HHhcccCCCCeEEECCCCCCH----HHHHHHHHh-ccCCCeEEEEECC------HHHHHHHHHHHH
Confidence 333334467899999999994 333344331 1145799999973 345555554443
No 163
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=33.63 E-value=2.6e+02 Score=27.24 Aligned_cols=136 Identities=15% Similarity=0.180 Sum_probs=70.5
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc-EEEEeecccc-
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP-FEYNVIAQKW- 493 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP-FeF~~Ia~~~- 493 (596)
+.-+|+|+|.+.| .+...+++++ |.-+||+|+.. .+.++.+.+++..++..++-| +++.. ...
T Consensus 75 ~~~~VLdiG~G~G----~~~~~l~~~~---~~~~v~~vEid------~~~v~~ar~~~~~~~~~~~~~rv~v~~--~D~~ 139 (275)
T 1iy9_A 75 NPEHVLVVGGGDG----GVIREILKHP---SVKKATLVDID------GKVIEYSKKFLPSIAGKLDDPRVDVQV--DDGF 139 (275)
T ss_dssp SCCEEEEESCTTC----HHHHHHTTCT---TCSEEEEEESC------HHHHHHHHHHCHHHHTTTTSTTEEEEE--SCSH
T ss_pred CCCEEEEECCchH----HHHHHHHhCC---CCceEEEEECC------HHHHHHHHHHhHhhccccCCCceEEEE--CcHH
Confidence 3458999999988 4555666553 45699999973 355666666666654434222 44432 111
Q ss_pred cccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeeeecCCCCcchhHHHHHHHHHHHH
Q 045079 494 ETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGISNGTYNAPFFLARFREALFHFS 572 (596)
Q Consensus 494 E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e~n~~~nsp~F~~RF~EAL~~YS 572 (596)
+-+.. .. ..=++|+++.... .-..+.. -...+++.+ +.|+|+-+++......+.. ..++.+.+....
T Consensus 140 ~~l~~--~~-~~fD~Ii~d~~~~--~~~~~~l----~~~~~~~~~~~~L~pgG~lv~~~~~~~~~---~~~~~~~~~~l~ 207 (275)
T 1iy9_A 140 MHIAK--SE-NQYDVIMVDSTEP--VGPAVNL----FTKGFYAGIAKALKEDGIFVAQTDNPWFT---PELITNVQRDVK 207 (275)
T ss_dssp HHHHT--CC-SCEEEEEESCSSC--CSCCCCC----STTHHHHHHHHHEEEEEEEEEECCCTTTC---HHHHHHHHHHHH
T ss_pred HHHhh--CC-CCeeEEEECCCCC--CCcchhh----hHHHHHHHHHHhcCCCcEEEEEcCCcccc---HHHHHHHHHHHH
Confidence 11110 00 1225677765431 1111110 013466555 6779998776643221111 445666666666
Q ss_pred HHhhhh
Q 045079 573 AMFDIF 578 (596)
Q Consensus 573 AlFDsL 578 (596)
..|...
T Consensus 208 ~~F~~v 213 (275)
T 1iy9_A 208 EIFPIT 213 (275)
T ss_dssp TTCSEE
T ss_pred HhCCCe
Confidence 666543
No 164
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=32.92 E-value=4.3e+02 Score=27.70 Aligned_cols=99 Identities=10% Similarity=0.059 Sum_probs=57.1
Q ss_pred eeEEEEceeccc----cchHHHHHHHhcCCC------CCCeEEEEeecCCCCCCCChH-HHHHHHHHHHHHHhhcCC---
Q 045079 417 RLHIIDFGICYG----FQWPCLIQILSSRPT------GPPMLRITGIELPQPGFRPAE-RVEETGNRLKSYCERFNV--- 482 (596)
Q Consensus 417 ~vHIIDfgI~~G----~QWp~Liq~LA~R~g------GPP~LRITgI~~pq~gfrp~~-~leetG~rL~~~A~~~gV--- 482 (596)
.+.|.|||.+.| .-+-.+|+.+..+.. .+|.+.+..-|+|.--|...- .|...-+ .+.+..|-
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~---~~~~~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYR---NLEKENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHH---HHHHHTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHh---hhhhhccCCCC
Confidence 799999999999 466677888877642 278999999999876542111 1222111 22333332
Q ss_pred cEEEEeecccccccCcccccccCCCeEEEEeeccccCCCCC
Q 045079 483 PFEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDD 523 (596)
Q Consensus 483 PFeF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~De 523 (596)
|.=+.+|..++-.- -.-++.+=+|-+.+.||-|.+-
T Consensus 130 ~~f~~gvpgSFy~r-----lfp~~S~d~v~Ss~aLHWls~~ 165 (384)
T 2efj_A 130 SCLIGAMPGSFYSR-----LFPEESMHFLHSCYCLHWLSQV 165 (384)
T ss_dssp SEEEEECCSCTTSC-----CSCTTCEEEEEEESCTTBCSSS
T ss_pred ceEEEecchhhhhc-----cCCCCceEEEEecceeeecCCC
Confidence 22223443332111 1224567788888899888754
No 165
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=32.47 E-value=58 Score=29.51 Aligned_cols=43 Identities=21% Similarity=0.429 Sum_probs=30.4
Q ss_pred CCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeeccccc
Q 045079 444 GPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWE 494 (596)
Q Consensus 444 GPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E 494 (596)
..-.+||||+ |.+.-.|....-.+.++.||+...|..+..++|
T Consensus 122 n~l~i~itgv--------peqvrkelakeaerl~~efni~v~y~imtgsle 164 (170)
T 4hhu_A 122 NRLVIVITGV--------PEQVRKELAKEAERLKAEFNINVQYQIMTGSLE 164 (170)
T ss_dssp SEEEEEEESC--------CHHHHHHHHHHHHHHHHHHTCEEEEEEEETTEE
T ss_pred CEEEEEEeCC--------cHHHHHHHHHHHHHHHHhcceEEEEEEEeccee
Confidence 3447999999 444445555555566778999999987776665
No 166
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=31.51 E-value=75 Score=31.19 Aligned_cols=41 Identities=15% Similarity=0.148 Sum_probs=29.2
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELP 456 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~p 456 (596)
.|++++.-...-+|+|+|.|.|. |-..|+.+. -++|||+..
T Consensus 20 ~iv~~~~~~~~~~VLEIG~G~G~----lt~~La~~~-----~~V~avEid 60 (255)
T 3tqs_A 20 KIVSAIHPQKTDTLVEIGPGRGA----LTDYLLTEC-----DNLALVEID 60 (255)
T ss_dssp HHHHHHCCCTTCEEEEECCTTTT----THHHHTTTS-----SEEEEEECC
T ss_pred HHHHhcCCCCcCEEEEEcccccH----HHHHHHHhC-----CEEEEEECC
Confidence 35566654556689999999885 556677652 389999973
No 167
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=31.46 E-value=59 Score=30.77 Aligned_cols=53 Identities=13% Similarity=0.075 Sum_probs=32.6
Q ss_pred cCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc
Q 045079 415 ATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP 483 (596)
Q Consensus 415 ~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP 483 (596)
++.-+|+|+|.+.|.--..|.+.+ ||.-+||+|+.. .+.++.+ .+.++..|+.
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~------~~~~~v~~vD~~------~~~~~~a----~~~~~~~g~~ 107 (221)
T 3dr5_A 55 NGSTGAIAITPAAGLVGLYILNGL------ADNTTLTCIDPE------SEHQRQA----KALFREAGYS 107 (221)
T ss_dssp TTCCEEEEESTTHHHHHHHHHHHS------CTTSEEEEECSC------HHHHHHH----HHHHHHTTCC
T ss_pred CCCCCEEEEcCCchHHHHHHHHhC------CCCCEEEEEECC------HHHHHHH----HHHHHHcCCC
Confidence 345589999998886544444443 234699999973 3444443 3445556665
No 168
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=31.17 E-value=1.8e+02 Score=27.88 Aligned_cols=55 Identities=18% Similarity=0.140 Sum_probs=31.5
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHH
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRL 473 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL 473 (596)
.|++.+.-...-.|+|+|.+.|.- ...|+.+-+ |..++|+|+.. ...++.+.+++
T Consensus 103 ~i~~~~~~~~~~~VLDiG~G~G~~----~~~la~~~~--~~~~v~~vD~s------~~~~~~a~~~~ 157 (277)
T 1o54_A 103 FIAMMLDVKEGDRIIDTGVGSGAM----CAVLARAVG--SSGKVFAYEKR------EEFAKLAESNL 157 (277)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHH----HHHHHHHTT--TTCEEEEECCC------HHHHHHHHHHH
T ss_pred HHHHHhCCCCCCEEEEECCcCCHH----HHHHHHHhC--CCcEEEEEECC------HHHHHHHHHHH
Confidence 344444434455899999998843 233343311 33599999963 34455444443
No 169
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=30.96 E-value=3.1e+02 Score=27.65 Aligned_cols=124 Identities=10% Similarity=0.024 Sum_probs=74.0
Q ss_pred HhHHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc
Q 045079 404 ANQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP 483 (596)
Q Consensus 404 ANqaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP 483 (596)
-...|.++++...+ -||++|.|+-- .-++|. .|+.+|+--||.| + +-+..++|..-+.. .-+
T Consensus 91 ~d~~v~~~~~~g~~-QvV~LGaGlDT----ra~Rl~----~~~~~~v~evD~P-------~-vi~~k~~lL~~~~~-~~~ 152 (310)
T 2uyo_A 91 FDTYFNNAVIDGIR-QFVILASGLDS----RAYRLD----WPTGTTVYEIDQP-------K-VLAYKSTTLAEHGV-TPT 152 (310)
T ss_dssp HHHHHHHHHHTTCC-EEEEETCTTCC----HHHHSC----CCTTCEEEEEECH-------H-HHHHHHHHHHHTTC-CCS
T ss_pred HHHHHHHHHHhCCC-eEEEeCCCCCc----hhhhcc----CCCCcEEEEcCCH-------H-HHHHHHHHHHhcCC-CCC
Confidence 34445555533223 59999998743 344443 3456899999975 2 34444455432111 123
Q ss_pred EEEEeecccccccCcc-cc---cccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHHhh-CCcEEEeeeec
Q 045079 484 FEYNVIAQKWETIRLE-DF---KIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRI-NPDVFIHGISN 552 (596)
Q Consensus 484 FeF~~Ia~~~E~i~~e-dL---~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir~L-~P~Vfv~~e~n 552 (596)
=.++.|...+.+ ... .| .++.+..+++-+.--|++|.++. .+.+|+.|.+. .|.-+++.++-
T Consensus 153 ~~~~~v~~Dl~d-~~~~~l~~~g~d~~~Pt~~i~Egvl~Yl~~~~------~~~ll~~l~~~~~~gs~l~~d~~ 219 (310)
T 2uyo_A 153 ADRREVPIDLRQ-DWPPALRSAGFDPSARTAWLAEGLLMYLPATA------QDGLFTEIGGLSAVGSRIAVETS 219 (310)
T ss_dssp SEEEEEECCTTS-CHHHHHHHTTCCTTSCEEEEECSCGGGSCHHH------HHHHHHHHHHTCCTTCEEEEECC
T ss_pred CCeEEEecchHh-hHHHHHHhccCCCCCCEEEEEechHhhCCHHH------HHHHHHHHHHhCCCCeEEEEEec
Confidence 446666554443 221 12 35667888888888889998763 36799999876 57777776653
No 170
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=30.34 E-value=2.6e+02 Score=27.07 Aligned_cols=31 Identities=10% Similarity=0.182 Sum_probs=20.8
Q ss_pred eeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecC
Q 045079 417 RLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIEL 455 (596)
Q Consensus 417 ~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~ 455 (596)
.-+|+|+|.+.|.- + ..|+.+ |. -++||||.
T Consensus 80 ~~~vLDlG~G~G~~--~--~~~a~~--~~--~~v~~~D~ 110 (281)
T 3bzb_A 80 GKTVCELGAGAGLV--S--IVAFLA--GA--DQVVATDY 110 (281)
T ss_dssp TCEEEETTCTTSHH--H--HHHHHT--TC--SEEEEEEC
T ss_pred CCeEEEecccccHH--H--HHHHHc--CC--CEEEEEeC
Confidence 34799999998842 2 245544 21 38999997
No 171
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=29.55 E-value=1.4e+02 Score=29.98 Aligned_cols=99 Identities=13% Similarity=0.126 Sum_probs=49.3
Q ss_pred ccchhhhH-HHHhHH----HHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHH
Q 045079 394 WPFIRMSY-LFANQT----IRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEE 468 (596)
Q Consensus 394 ~Pf~kfa~-~~ANqa----IleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~lee 468 (596)
-|=.+++. |..+.. |++++.-...-+|+|+|.+.|..-..|.+ + + -++|||+... +.++.
T Consensus 23 ~~~k~~GQnfL~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~----~-~----~~V~aVEid~------~li~~ 87 (295)
T 3gru_A 23 KPKKKLGQCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAK----N-A----KKVYVIEIDK------SLEPY 87 (295)
T ss_dssp -------CCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHH----H-S----SEEEEEESCG------GGHHH
T ss_pred CCccccCccccCCHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHh----c-C----CEEEEEECCH------HHHHH
Confidence 34445554 444444 44444444556899999999965444444 3 1 3799999742 33444
Q ss_pred HHHHHHHHHhhcCCcEEEEeecccccccCcccccccCCCeEEEEeeccc
Q 045079 469 TGNRLKSYCERFNVPFEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRM 517 (596)
Q Consensus 469 tG~rL~~~A~~~gVPFeF~~Ia~~~E~i~~edL~i~~dE~LaVN~~f~L 517 (596)
+.+++. ..+ .+++ +...+.++...+. +-.+|+.|..|..
T Consensus 88 a~~~~~----~~~-~v~v--i~gD~l~~~~~~~---~fD~Iv~NlPy~i 126 (295)
T 3gru_A 88 ANKLKE----LYN-NIEI--IWGDALKVDLNKL---DFNKVVANLPYQI 126 (295)
T ss_dssp HHHHHH----HCS-SEEE--EESCTTTSCGGGS---CCSEEEEECCGGG
T ss_pred HHHHhc----cCC-CeEE--EECchhhCCcccC---CccEEEEeCcccc
Confidence 444443 111 2333 3334444433332 2347888877653
No 172
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=29.35 E-value=23 Score=38.76 Aligned_cols=79 Identities=10% Similarity=0.041 Sum_probs=52.6
Q ss_pred hhhHHHHhHHHHHhhhhcCeeEEEEceec--cc--------------cchHHHHHHHhcCCCCCCeEEEEeecCCCCCCC
Q 045079 398 RMSYLFANQTIRKLAEKATRLHIIDFGIC--YG--------------FQWPCLIQILSSRPTGPPMLRITGIELPQPGFR 461 (596)
Q Consensus 398 kfa~~~ANqaIleA~~g~~~vHIIDfgI~--~G--------------~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfr 461 (596)
..+....|-+|++++. +..+|.||..+- +| +.|..-+++++.+..| |+| ++.|+.
T Consensus 89 N~s~~~~~l~Im~acl-eaGv~YlDTa~E~~~p~~~~~~~~p~~~~~Y~~~~~~~~~~~~~~G------tAi--lg~G~n 159 (480)
T 2ph5_A 89 DVSIGISSLALIILCN-QKGALYINAATEPWKEEFVMEKMALNRRTNYSLREEVLRLKDKTQK------TAL--ITHGAN 159 (480)
T ss_dssp ECCSSSCHHHHHHHHH-HHTCEEEESSCCCCCC----------CCCHHHHHHHHHTTTTTCCS------CEE--CSCBTT
T ss_pred ECCccccCHHHHHHHH-HcCCCEEECCCCcccccccccccCcchhhhHHHHHHHHHHHHhcCC------cEE--ecCCCC
Confidence 3455557888999884 456999999862 11 1233336677655444 444 567788
Q ss_pred ChHHHHHHHHHHHHHHhhcCCcEE
Q 045079 462 PAERVEETGNRLKSYCERFNVPFE 485 (596)
Q Consensus 462 p~~~leetG~rL~~~A~~~gVPFe 485 (596)
|.-.---+..-|..+|++.|+||+
T Consensus 160 PGvvsvf~~~Al~~la~d~g~~~~ 183 (480)
T 2ph5_A 160 PGLVSHFIKEALLNIAKDNGLTIN 183 (480)
T ss_dssp TBHHHHHHHHHHHHHHHTTTCCCC
T ss_pred ccHHHHHHHHHHHhHhhhcCCccc
Confidence 876666677778888999888864
No 173
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=29.25 E-value=2.3e+02 Score=28.88 Aligned_cols=97 Identities=7% Similarity=0.010 Sum_probs=51.0
Q ss_pred eeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeecccccc-
Q 045079 417 RLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWET- 495 (596)
Q Consensus 417 ~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E~- 495 (596)
.-+|+|+| +.|. +. ..|+.+ | |..++||||.. ...++.+.++ ++..|+. ..+.+...+.+
T Consensus 173 ~~~VLDlG-G~G~-~~---~~la~~--~-~~~~v~~vDi~------~~~l~~a~~~----~~~~g~~-~v~~~~~D~~~~ 233 (373)
T 2qm3_A 173 NKDIFVLG-DDDL-TS---IALMLS--G-LPKRIAVLDID------ERLTKFIEKA----ANEIGYE-DIEIFTFDLRKP 233 (373)
T ss_dssp TCEEEEES-CTTC-HH---HHHHHH--T-CCSEEEEECSC------HHHHHHHHHH----HHHHTCC-CEEEECCCTTSC
T ss_pred CCEEEEEC-CCCH-HH---HHHHHh--C-CCCEEEEEECC------HHHHHHHHHH----HHHcCCC-CEEEEEChhhhh
Confidence 35799999 8775 22 223332 2 34699999973 2445554444 4445663 23333334433
Q ss_pred cCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcE
Q 045079 496 IRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDV 545 (596)
Q Consensus 496 i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~V 545 (596)
+.. .+. ..=++|++|..|.... ...+|+.+ +.|+|.-
T Consensus 234 l~~-~~~-~~fD~Vi~~~p~~~~~-----------~~~~l~~~~~~LkpgG 271 (373)
T 2qm3_A 234 LPD-YAL-HKFDTFITDPPETLEA-----------IRAFVGRGIATLKGPR 271 (373)
T ss_dssp CCT-TTS-SCBSEEEECCCSSHHH-----------HHHHHHHHHHTBCSTT
T ss_pred chh-hcc-CCccEEEECCCCchHH-----------HHHHHHHHHHHcccCC
Confidence 221 010 1225888887665431 14566655 6678843
No 174
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=28.94 E-value=2.1e+02 Score=26.42 Aligned_cols=32 Identities=9% Similarity=0.169 Sum_probs=23.7
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELP 456 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~p 456 (596)
+.-+|+|+|.+.|. +...|+.+ + .++||||..
T Consensus 48 ~~~~vLDiGcG~G~----~~~~l~~~-~----~~v~~vD~s 79 (226)
T 3m33_A 48 PQTRVLEAGCGHGP----DAARFGPQ-A----ARWAAYDFS 79 (226)
T ss_dssp TTCEEEEESCTTSH----HHHHHGGG-S----SEEEEEESC
T ss_pred CCCeEEEeCCCCCH----HHHHHHHc-C----CEEEEEECC
Confidence 34589999999986 55566665 2 489999973
No 175
>2qgh_A Diaminopimelate decarboxylase; lyase; HET: PLP LYS; 2.30A {Helicobacter pylori} PDB: 3c5q_A*
Probab=28.37 E-value=3.2e+02 Score=28.36 Aligned_cols=71 Identities=11% Similarity=0.213 Sum_probs=42.7
Q ss_pred CeeEE-EEcee---------------cccc---chHHHHHHHhcCCCCCCeEEEEeecCCCC-CCCChHHHHHHHHHHHH
Q 045079 416 TRLHI-IDFGI---------------CYGF---QWPCLIQILSSRPTGPPMLRITGIELPQP-GFRPAERVEETGNRLKS 475 (596)
Q Consensus 416 ~~vHI-IDfgI---------------~~G~---QWp~Liq~LA~R~gGPP~LRITgI~~pq~-gfrp~~~leetG~rL~~ 475 (596)
-+||| ||-|+ .+|+ +|+.+++.+... |.|+|.||..--. .....+...+.-+++.+
T Consensus 150 ~~v~lrvn~g~~~~~~~~~~tg~~~sRfG~~~~e~~~l~~~~~~~----~~l~l~Gl~~H~gs~~~~~~~~~~~~~~~~~ 225 (425)
T 2qgh_A 150 ARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKS----AFLEPVSVHFHIGSQLLDLEPIIEASQKVAK 225 (425)
T ss_dssp EEEEEEBCCCCCCCSCGGGBCCSTTSSSSBCHHHHHHHHHHHHHC----SSEEEEEEECCCBSSBCCHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCCCCCCCcccccCCCCCCCcCCHHHHHHHHHHHHhC----CCccEEEEEEECCCCCCCHHHHHHHHHHHHH
Confidence 36888 88753 3787 456677766653 4699999975311 11123345555566666
Q ss_pred HHhhc---CCcEEEEeec
Q 045079 476 YCERF---NVPFEYNVIA 490 (596)
Q Consensus 476 ~A~~~---gVPFeF~~Ia 490 (596)
+++.+ |+++++--+.
T Consensus 226 ~~~~l~~~g~~~~~l~~G 243 (425)
T 2qgh_A 226 IAKSLIALGIDLRFFDVG 243 (425)
T ss_dssp HHHHHHHTTCCCCEEECC
T ss_pred HHHHHHhcCCCCCEEEEC
Confidence 65554 7777765443
No 176
>1k87_A PUTA, proline dehydrogenase, proline dehydroge; multi-functional protein, transcripti repressor, shuttling, dimer, oxidoreductase; HET: FAD 1PE; 2.00A {Escherichia coli} SCOP: a.176.1.1 c.1.23.2
Probab=28.06 E-value=83 Score=35.76 Aligned_cols=89 Identities=9% Similarity=0.101 Sum_probs=52.7
Q ss_pred hHHHHhHHHHHhhhh------cCeeEEEEceecc----------ccchHHHHHHHhcCCCCC-----C--eEEEEeecCC
Q 045079 400 SYLFANQTIRKLAEK------ATRLHIIDFGICY----------GFQWPCLIQILSSRPTGP-----P--MLRITGIELP 456 (596)
Q Consensus 400 a~~~ANqaIleA~~g------~~~vHIIDfgI~~----------G~QWp~Liq~LA~R~gGP-----P--~LRITgI~~p 456 (596)
.+|.+-.+|-++++. ..--.++||-.-. --..-.+|++++....|+ | +||+|+++..
T Consensus 257 ~qFVaGet~~ea~~~i~~L~~~G~~~slD~LGEa~~t~~eA~~~~~~y~~~I~~i~~~~~~~~~~~~~~VSVKlSaLg~~ 336 (669)
T 1k87_A 257 EQFVTGETIAEALANARKLEEKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPR 336 (669)
T ss_dssp GGGCSBSSHHHHHHHHHHHHTTTCEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHHHSSCHHHHSCEEEECGGGTSTT
T ss_pred CeeeCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCCHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCeEEEeccccccc
Confidence 677777777777642 2223467864211 123566788876543221 3 7999999875
Q ss_pred CCCCC---ChHHHHHHHHHHHHHHhhcCCcEEEEe
Q 045079 457 QPGFR---PAERVEETGNRLKSYCERFNVPFEYNV 488 (596)
Q Consensus 457 q~gfr---p~~~leetG~rL~~~A~~~gVPFeF~~ 488 (596)
-.... ..+.+.+--++|.+.|+..||.+-+.+
T Consensus 337 ~~~~~~~~~~~~l~~rl~~L~~~A~~~gv~v~IDA 371 (669)
T 1k87_A 337 YSRAQYDRVMEELYPRLKSLTLLARQYDIGINIDA 371 (669)
T ss_dssp GGGCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECC
T ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHcCCEEEEeC
Confidence 32100 013455556777778889998776654
No 177
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=28.00 E-value=1.4e+02 Score=28.59 Aligned_cols=34 Identities=12% Similarity=0.313 Sum_probs=22.9
Q ss_pred eeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 045079 417 RLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELP 456 (596)
Q Consensus 417 ~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~p 456 (596)
.-+|+|+|.+.|.-=..|.+.+ |+.-+||+|+..
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~------~~~~~v~~iD~s 113 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAI------PEDGKILAMDIN 113 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHS------CTTCEEEEEESC
T ss_pred cCEEEEeCCCcCHHHHHHHHhC------CCCCEEEEEECC
Confidence 3489999999886444444433 223599999974
No 178
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=27.68 E-value=2.6e+02 Score=28.09 Aligned_cols=135 Identities=10% Similarity=0.108 Sum_probs=65.1
Q ss_pred eeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhc-CCcEEEEeecccccc
Q 045079 417 RLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERF-NVPFEYNVIAQKWET 495 (596)
Q Consensus 417 ~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~-gVPFeF~~Ia~~~E~ 495 (596)
.-+|+|+|.+.|. +...|+++. |..+||+||.. .+.++.+.+++..++..+ +-.++|.. ..+.+
T Consensus 117 ~~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDis------~~~l~~ar~~~~~~~~~~~~~~v~~~~--~D~~~ 181 (321)
T 2pt6_A 117 PKNVLVVGGGDGG----IIRELCKYK---SVENIDICEID------ETVIEVSKIYFKNISCGYEDKRVNVFI--EDASK 181 (321)
T ss_dssp CCEEEEEECTTCH----HHHHHTTCT---TCCEEEEEESC------HHHHHHHHHHCTTTSGGGGSTTEEEEE--SCHHH
T ss_pred CCEEEEEcCCccH----HHHHHHHcC---CCCEEEEEECC------HHHHHHHHHHHHhhccccCCCcEEEEE--ccHHH
Confidence 3589999999884 555666553 45799999973 344555554443322222 11244432 22111
Q ss_pred -cCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeeeecCCCCcchhHHHHHHHHHHHHH
Q 045079 496 -IRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGISNGTYNAPFFLARFREALFHFSA 573 (596)
Q Consensus 496 -i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e~n~~~nsp~F~~RF~EAL~~YSA 573 (596)
+.. . -..=++|++|....++. .+.. -...+++.+ +.|+|+-+++......+..+..+.++ +.....
T Consensus 182 ~l~~--~-~~~fDvIi~d~~~p~~~--~~~l----~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~---~~~l~~ 249 (321)
T 2pt6_A 182 FLEN--V-TNTYDVIIVDSSDPIGP--AETL----FNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNM---IGYAKK 249 (321)
T ss_dssp HHHH--C-CSCEEEEEEECCCSSSG--GGGG----SSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHH---HHHHHT
T ss_pred HHhh--c-CCCceEEEECCcCCCCc--chhh----hHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHH---HHHHHH
Confidence 100 0 01125677765321110 0000 014567666 56799988776653333333333333 333444
Q ss_pred Hhhhh
Q 045079 574 MFDIF 578 (596)
Q Consensus 574 lFDsL 578 (596)
.|...
T Consensus 250 ~F~~v 254 (321)
T 2pt6_A 250 LFKKV 254 (321)
T ss_dssp TCSEE
T ss_pred HCCCe
Confidence 45433
No 179
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=27.01 E-value=1e+02 Score=29.51 Aligned_cols=52 Identities=15% Similarity=0.268 Sum_probs=31.3
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEE
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEY 486 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF 486 (596)
..-+|+|+|.+.|. +...++.+ |+ ++||||.. ...++.+.++ ++..|+.++|
T Consensus 120 ~~~~VLDiGcG~G~----l~~~la~~--g~---~v~gvDi~------~~~v~~a~~n----~~~~~~~v~~ 171 (254)
T 2nxc_A 120 PGDKVLDLGTGSGV----LAIAAEKL--GG---KALGVDID------PMVLPQAEAN----AKRNGVRPRF 171 (254)
T ss_dssp TTCEEEEETCTTSH----HHHHHHHT--TC---EEEEEESC------GGGHHHHHHH----HHHTTCCCEE
T ss_pred CCCEEEEecCCCcH----HHHHHHHh--CC---eEEEEECC------HHHHHHHHHH----HHHcCCcEEE
Confidence 34589999999885 33345543 44 99999973 2335544433 3445666444
No 180
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=26.99 E-value=1.2e+02 Score=27.86 Aligned_cols=56 Identities=18% Similarity=0.196 Sum_probs=32.4
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--EEEE
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP--FEYN 487 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP--FeF~ 487 (596)
+.-+|+|+|.+.|.--. .|+.+- |+..+||+|+.. ...++.+.+ .++..|++ .+|.
T Consensus 58 ~~~~vLdiG~G~G~~~~----~la~~~--~~~~~v~~vD~~------~~~~~~a~~----~~~~~~~~~~v~~~ 115 (223)
T 3duw_A 58 GARNILEIGTLGGYSTI----WLARGL--SSGGRVVTLEAS------EKHADIARS----NIERANLNDRVEVR 115 (223)
T ss_dssp TCSEEEEECCTTSHHHH----HHHTTC--CSSCEEEEEESC------HHHHHHHHH----HHHHTTCTTTEEEE
T ss_pred CCCEEEEecCCccHHHH----HHHHhC--CCCCEEEEEECC------HHHHHHHHH----HHHHcCCCCcEEEE
Confidence 44589999999884332 344332 334699999973 244544433 34445653 4544
No 181
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=26.86 E-value=1.2e+02 Score=27.78 Aligned_cols=61 Identities=16% Similarity=0.102 Sum_probs=35.3
Q ss_pred HHHHhhh--hcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHH
Q 045079 407 TIRKLAE--KATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKS 475 (596)
Q Consensus 407 aIleA~~--g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~ 475 (596)
.+++.+. -...-+|+|+|.+.|..-..|.+.+..+ .-|..++|||+.. ...++.+.+++.+
T Consensus 69 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~--~~~~~~v~~vD~~------~~~~~~a~~~~~~ 131 (227)
T 2pbf_A 69 LSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVL--ENKNSYVIGLERV------KDLVNFSLENIKR 131 (227)
T ss_dssp HHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTT--TCTTCEEEEEESC------HHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhccc--CCCCCEEEEEeCC------HHHHHHHHHHHHH
Confidence 3445442 2344689999999986444444433111 1245699999973 3456655555543
No 182
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=26.45 E-value=4.4e+02 Score=25.91 Aligned_cols=114 Identities=9% Similarity=0.089 Sum_probs=57.6
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCC-cEEEEeeccccc
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNV-PFEYNVIAQKWE 494 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gV-PFeF~~Ia~~~E 494 (596)
+.-.|+|+|.+.|. +...|+++ +|..+||+|+.. ...++.+.+++..++..++- .+++.. ..+.
T Consensus 95 ~~~~VLdiG~G~G~----~~~~l~~~---~~~~~v~~vDid------~~~i~~a~~~~~~~~~~~~~~~v~~~~--~D~~ 159 (304)
T 3bwc_A 95 KPERVLIIGGGDGG----VLREVLRH---GTVEHCDLVDID------GEVMEQSKQHFPQISRSLADPRATVRV--GDGL 159 (304)
T ss_dssp SCCEEEEEECTTSH----HHHHHHTC---TTCCEEEEEESC------HHHHHHHHHHCHHHHGGGGCTTEEEEE--SCHH
T ss_pred CCCeEEEEcCCCCH----HHHHHHhC---CCCCEEEEEECC------HHHHHHHHHHhHHhhcccCCCcEEEEE--CcHH
Confidence 34579999999884 55566654 345799999973 34566666666555444332 244432 2221
Q ss_pred ccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeeee
Q 045079 495 TIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGIS 551 (596)
Q Consensus 495 ~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e~ 551 (596)
..-.. +.-..=++|++++... ..+++... ...+|+.+ |.|+|+-+++...
T Consensus 160 ~~~~~-~~~~~fDvIi~d~~~~--~~~~~~l~----~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 160 AFVRQ-TPDNTYDVVIIDTTDP--AGPASKLF----GEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp HHHHS-SCTTCEEEEEEECC-----------C----CHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHh-ccCCceeEEEECCCCc--cccchhhh----HHHHHHHHHHhcCCCcEEEEec
Confidence 11100 0001124666665432 11111100 13567666 6679987766544
No 183
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=26.29 E-value=2.4e+02 Score=27.22 Aligned_cols=43 Identities=14% Similarity=0.081 Sum_probs=28.9
Q ss_pred HHHHhhh---hcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecC
Q 045079 407 TIRKLAE---KATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIEL 455 (596)
Q Consensus 407 aIleA~~---g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~ 455 (596)
+|++++. =...=+|+|+|.+.|. |...|..+... .-+|+|||.
T Consensus 64 ~ll~~l~~~~l~~g~~VLDlG~GtG~-~t~~la~~v~~-----~G~V~avD~ 109 (232)
T 3id6_C 64 AILKGLKTNPIRKGTKVLYLGAASGT-TISHVSDIIEL-----NGKAYGVEF 109 (232)
T ss_dssp HHHTTCSCCSCCTTCEEEEETCTTSH-HHHHHHHHHTT-----TSEEEEEEC
T ss_pred HHHhhhhhcCCCCCCEEEEEeecCCH-HHHHHHHHhCC-----CCEEEEEEC
Confidence 4455543 2344679999999997 77666655422 238999997
No 184
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=26.09 E-value=86 Score=29.98 Aligned_cols=50 Identities=24% Similarity=0.368 Sum_probs=33.1
Q ss_pred hcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHH
Q 045079 414 KATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSY 476 (596)
Q Consensus 414 g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~ 476 (596)
..+...|+|+|.+.|. ++..||.+. |..+++|||.. ...++.+.+++...
T Consensus 44 ~~~~~~vLDiGcG~G~----~~~~la~~~---p~~~v~GiDis------~~~l~~A~~~~~~l 93 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGG----LLVELSPLF---PDTLILGLEIR------VKVSDYVQDRIRAL 93 (235)
T ss_dssp --CCEEEEEETCTTCH----HHHHHGGGS---TTSEEEEEESC------HHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEccCCcH----HHHHHHHHC---CCCeEEEEECC------HHHHHHHHHHHHHH
Confidence 3456789999999884 445566553 44689999973 35566666665543
No 185
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=25.93 E-value=1.8e+02 Score=26.85 Aligned_cols=54 Identities=15% Similarity=0.201 Sum_probs=33.4
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCC--cEEEEe
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNV--PFEYNV 488 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gV--PFeF~~ 488 (596)
..-+|+|+|.+.|. +...|+.+ | .++||||.. ...++.+.+ -++..|+ ..+|..
T Consensus 78 ~~~~vLD~gcG~G~----~~~~la~~--~---~~v~~vD~s------~~~~~~a~~----~~~~~~~~~~~~~~~ 133 (241)
T 3gdh_A 78 KCDVVVDAFCGVGG----NTIQFALT--G---MRVIAIDID------PVKIALARN----NAEVYGIADKIEFIC 133 (241)
T ss_dssp CCSEEEETTCTTSH----HHHHHHHT--T---CEEEEEESC------HHHHHHHHH----HHHHTTCGGGEEEEE
T ss_pred CCCEEEECccccCH----HHHHHHHc--C---CEEEEEECC------HHHHHHHHH----HHHHcCCCcCeEEEE
Confidence 45689999999984 33444544 2 689999973 344544433 3455676 355543
No 186
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=25.77 E-value=1.4e+02 Score=28.70 Aligned_cols=121 Identities=12% Similarity=-0.036 Sum_probs=57.1
Q ss_pred cCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--EEEEeeccc
Q 045079 415 ATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP--FEYNVIAQK 492 (596)
Q Consensus 415 ~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP--FeF~~Ia~~ 492 (596)
...-+|+|+|.+.|.-- ..|+.|. |..+|||||.. ...++.+.+++...+. .|+. ++|. ...
T Consensus 35 ~~~~~VLDlG~G~G~~~----l~la~~~---~~~~v~gvDi~------~~~~~~a~~n~~~~~~-~~l~~~v~~~--~~D 98 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAG----MAVAARL---EKAEVTLYERS------QEMAEFARRSLELPDN-AAFSARIEVL--EAD 98 (260)
T ss_dssp CSCEEEEECCSSSSHHH----HHHHHHC---TTEEEEEEESS------HHHHHHHHHHTTSGGG-TTTGGGEEEE--ECC
T ss_pred cCCCEEEEeCChHhHHH----HHHHHhC---CCCeEEEEECC------HHHHHHHHHHHHhhhh-CCCcceEEEE--eCC
Confidence 34568999999998533 3344332 35899999973 2344444433322110 4444 4443 333
Q ss_pred ccccCc----ccccccCCCeEEEEeeccccC-CC--CCC--cC---CCCcHHHHHHHH-HhhCCcEEEeeee
Q 045079 493 WETIRL----EDFKIDRDEVTVVNCVHRMKN-LP--DDT--VV---DSSPRDAVLDLI-KRINPDVFIHGIS 551 (596)
Q Consensus 493 ~E~i~~----edL~i~~dE~LaVN~~f~Lh~-L~--Des--v~---~~spRd~vL~~I-r~L~P~Vfv~~e~ 551 (596)
+.++.. +.+.-..=++|+.|..|.... .. ++. +. .....+.+|+.+ +-|+|.-.+..+.
T Consensus 99 ~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 99 VTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp TTCCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 333211 011111225777776664321 00 000 00 012345677665 5679987666554
No 187
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=25.76 E-value=1.6e+02 Score=29.25 Aligned_cols=45 Identities=16% Similarity=0.134 Sum_probs=30.4
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELP 456 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~p 456 (596)
.|++++.-...-+|+|+|.|.|.--..|.+....+ ..++||||..
T Consensus 33 ~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~-----~~~V~avDid 77 (279)
T 3uzu_A 33 AIVAAIRPERGERMVEIGPGLGALTGPVIARLATP-----GSPLHAVELD 77 (279)
T ss_dssp HHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBT-----TBCEEEEECC
T ss_pred HHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCc-----CCeEEEEECC
Confidence 35666655556789999999998655555543211 3569999973
No 188
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=25.28 E-value=1.4e+02 Score=27.61 Aligned_cols=54 Identities=26% Similarity=0.383 Sum_probs=34.8
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHH
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSY 476 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~ 476 (596)
..-+|+|+|.+.|..-..|.+.+... +..+..++|+|+.. .+.++.+.+++.+.
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~~~~-~~~~~~~v~~vD~~------~~~~~~a~~~~~~~ 137 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYIKAK-GVDADTRIVGIEHQ------AELVRRSKANLNTD 137 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHS-CCCTTCEEEEEESC------HHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHHHhcccc-cCCccCEEEEEEcC------HHHHHHHHHHHHhc
Confidence 34589999999987665555544321 22345699999973 35566666666543
No 189
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=25.18 E-value=42 Score=28.68 Aligned_cols=43 Identities=16% Similarity=0.178 Sum_probs=32.5
Q ss_pred CCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEE
Q 045079 443 TGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYN 487 (596)
Q Consensus 443 gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~ 487 (596)
=|||.-|||...+..- .-...|+++-..+.+..+..|.-|+|+
T Consensus 49 vgaP~Y~i~~~~~D~k--~ge~~L~~ai~~i~~~i~~~gG~~~v~ 91 (93)
T 2qn6_B 49 IGAPRYRVDVVGTNPK--EASEALNQIISNLIKIGKEENVDISVV 91 (93)
T ss_dssp SSTTEEEEEEEESCHH--HHHHHHHHHHHHHHHHHHHTTEEEEEC
T ss_pred EcCCeEEEEEEecCHH--HHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 3889888888765310 012468999999999999999999885
No 190
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=25.18 E-value=3e+02 Score=25.80 Aligned_cols=48 Identities=25% Similarity=0.340 Sum_probs=31.3
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHH
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSY 476 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~ 476 (596)
+.-.|+|+|.+.|. +...|+.+. |..++||||.. ...++.+.+++...
T Consensus 49 ~~~~vLDiGcG~G~----~~~~la~~~---~~~~v~gvD~s------~~~l~~a~~~~~~~ 96 (246)
T 2vdv_E 49 KKVTIADIGCGFGG----LMIDLSPAF---PEDLILGMEIR------VQVTNYVEDRIIAL 96 (246)
T ss_dssp CCEEEEEETCTTSH----HHHHHHHHS---TTSEEEEEESC------HHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCH----HHHHHHHhC---CCCCEEEEEcC------HHHHHHHHHHHHHH
Confidence 45689999999985 333344332 35799999973 34566666655544
No 191
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=24.94 E-value=2.8e+02 Score=28.33 Aligned_cols=112 Identities=11% Similarity=0.051 Sum_probs=56.5
Q ss_pred eEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCC---cEEEEeeccccc
Q 045079 418 LHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNV---PFEYNVIAQKWE 494 (596)
Q Consensus 418 vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gV---PFeF~~Ia~~~E 494 (596)
-+|+|+|.+.|.-- -.++.+ | .-++||||.. ...++.+.++ ++..|+ ..+|.. ..+.
T Consensus 222 ~~VLDl~cG~G~~s----l~la~~--g--~~~V~~vD~s------~~al~~a~~n----~~~ngl~~~~v~~~~--~D~~ 281 (396)
T 3c0k_A 222 KRVLNCFSYTGGFA----VSALMG--G--CSQVVSVDTS------QEALDIARQN----VELNKLDLSKAEFVR--DDVF 281 (396)
T ss_dssp CEEEEESCTTCSHH----HHHHHT--T--CSEEEEEESC------HHHHHHHHHH----HHHTTCCGGGEEEEE--SCHH
T ss_pred CeEEEeeccCCHHH----HHHHHC--C--CCEEEEEECC------HHHHHHHHHH----HHHcCCCccceEEEE--CCHH
Confidence 47999999988522 233433 2 2489999973 3445544333 344566 355543 2222
Q ss_pred ccCccccc--ccCCCeEEEEeecccc---CCCCCCcCCCCcHHHHHHHHHhhCCcEEEeeeecC
Q 045079 495 TIRLEDFK--IDRDEVTVVNCVHRMK---NLPDDTVVDSSPRDAVLDLIKRINPDVFIHGISNG 553 (596)
Q Consensus 495 ~i~~edL~--i~~dE~LaVN~~f~Lh---~L~Desv~~~spRd~vL~~Ir~L~P~Vfv~~e~n~ 553 (596)
++-. .+. -..=++|++|..+.-. ++.+. .....+.+...++.++|.-+++...+.
T Consensus 282 ~~~~-~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~---~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 282 KLLR-TYRDRGEKFDVIVMDPPKFVENKSQLMGA---CRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp HHHH-HHHHTTCCEEEEEECCSSTTTCSSSSSCC---CTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHH-HHHhcCCCCCEEEECCCCCCCChhHHHHH---HHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 2211 010 0112477777544211 11110 012345566678899999766655443
No 192
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=24.79 E-value=2.3e+02 Score=26.61 Aligned_cols=34 Identities=21% Similarity=0.337 Sum_probs=22.7
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecC
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIEL 455 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~ 455 (596)
+.-+|+|+|.+.|.-=..|.+.+ |+.-+||+|+.
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~------~~~~~v~~iD~ 103 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSI------PDDGKITAIDF 103 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHS------CTTCEEEEEES
T ss_pred CCCEEEEeCCCCCHHHHHHHHhC------CCCCEEEEEEC
Confidence 33489999999886433343333 23469999997
No 193
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=24.77 E-value=3.1e+02 Score=23.03 Aligned_cols=36 Identities=17% Similarity=0.195 Sum_probs=23.5
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQ 457 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq 457 (596)
+.-+|+|+|.+.|.--..|.+.+ .|..++||||...
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~------~~~~~v~~~D~~~ 57 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQI------GGKGRIIACDLLP 57 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHH------CTTCEEEEEESSC
T ss_pred CCCeEEEeCCCCCHHHHHHHHHh------CCCCeEEEEECcc
Confidence 44589999999885333333333 1336899999753
No 194
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=24.60 E-value=2.6e+02 Score=27.09 Aligned_cols=115 Identities=9% Similarity=0.008 Sum_probs=55.7
Q ss_pred eEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--EEEEeecccccc
Q 045079 418 LHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP--FEYNVIAQKWET 495 (596)
Q Consensus 418 vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP--FeF~~Ia~~~E~ 495 (596)
-+|+|+|.+.|. |.. .+|.+ |+. ++||||.. ...++.+. +-|+..|+. .+|. .....+
T Consensus 127 ~~VLDlgcG~G~-~~~---~la~~--~~~--~V~~vD~s------~~~~~~a~----~n~~~n~~~~~v~~~--~~D~~~ 186 (278)
T 2frn_A 127 ELVVDMFAGIGH-LSL---PIAVY--GKA--KVIAIEKD------PYTFKFLV----ENIHLNKVEDRMSAY--NMDNRD 186 (278)
T ss_dssp CEEEETTCTTTT-THH---HHHHH--TCC--EEEEECCC------HHHHHHHH----HHHHHTTCTTTEEEE--CSCTTT
T ss_pred CEEEEecccCCH-HHH---HHHHh--CCC--EEEEEECC------HHHHHHHH----HHHHHcCCCceEEEE--ECCHHH
Confidence 479999999984 222 22322 333 89999973 23454433 334455665 4443 223332
Q ss_pred cCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHHhhCCcEEEeeeecC--CCCcchhHHHHHHHHH
Q 045079 496 IRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGISNG--TYNAPFFLARFREALF 569 (596)
Q Consensus 496 i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir~L~P~Vfv~~e~n~--~~nsp~F~~RF~EAL~ 569 (596)
+.. + ..=++|++|.. . .....+-...+-|+|.-+++....+ ......+..++++++.
T Consensus 187 ~~~-~---~~fD~Vi~~~p-------~------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~ 245 (278)
T 2frn_A 187 FPG-E---NIADRILMGYV-------V------RTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITK 245 (278)
T ss_dssp CCC-C---SCEEEEEECCC-------S------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHH
T ss_pred hcc-c---CCccEEEECCc-------h------hHHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHH
Confidence 222 0 11134444322 1 1122333356778998655543332 1122234566666554
No 195
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=24.59 E-value=2.4e+02 Score=26.14 Aligned_cols=53 Identities=21% Similarity=0.280 Sum_probs=31.8
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHH
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRL 473 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL 473 (596)
.+++.+.-...-.|+|+|.+.|..-..|.+.. + .++|+|+.. ...++.+.+++
T Consensus 82 ~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~----~----~~v~~vD~~------~~~~~~a~~~~ 134 (235)
T 1jg1_A 82 IMLEIANLKPGMNILEVGTGSGWNAALISEIV----K----TDVYTIERI------PELVEFAKRNL 134 (235)
T ss_dssp HHHHHHTCCTTCCEEEECCTTSHHHHHHHHHH----C----SCEEEEESC------HHHHHHHHHHH
T ss_pred HHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHh----C----CEEEEEeCC------HHHHHHHHHHH
Confidence 34555544445589999999886544444433 1 589999963 34455544444
No 196
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=23.99 E-value=1.7e+02 Score=27.17 Aligned_cols=33 Identities=15% Similarity=0.214 Sum_probs=21.5
Q ss_pred eeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecC
Q 045079 417 RLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIEL 455 (596)
Q Consensus 417 ~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~ 455 (596)
.-+|+|+|.+.|.- ...|+.+-| |.-+++|||.
T Consensus 78 ~~~vLDlG~G~G~~----~~~la~~~g--~~~~v~gvD~ 110 (233)
T 2ipx_A 78 GAKVLYLGAASGTT----VSHVSDIVG--PDGLVYAVEF 110 (233)
T ss_dssp TCEEEEECCTTSHH----HHHHHHHHC--TTCEEEEECC
T ss_pred CCEEEEEcccCCHH----HHHHHHHhC--CCcEEEEEEC
Confidence 44799999999853 333443321 2348999997
No 197
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=23.72 E-value=1.6e+02 Score=28.77 Aligned_cols=43 Identities=7% Similarity=0.101 Sum_probs=28.9
Q ss_pred eeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHH
Q 045079 417 RLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRL 473 (596)
Q Consensus 417 ~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL 473 (596)
.-+|+|+|.+.| .+...|+.+ |..+||+|+.. ...++.+.+++
T Consensus 76 ~~~VLdiG~G~G----~~~~~l~~~----~~~~v~~vDid------~~~i~~ar~~~ 118 (281)
T 1mjf_A 76 PKRVLVIGGGDG----GTVREVLQH----DVDEVIMVEID------EDVIMVSKDLI 118 (281)
T ss_dssp CCEEEEEECTTS----HHHHHHTTS----CCSEEEEEESC------HHHHHHHHHHT
T ss_pred CCeEEEEcCCcC----HHHHHHHhC----CCCEEEEEECC------HHHHHHHHHHH
Confidence 357999999988 455666665 23699999973 34455555544
No 198
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=23.10 E-value=2.2e+02 Score=26.79 Aligned_cols=35 Identities=17% Similarity=0.386 Sum_probs=23.8
Q ss_pred cCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 045079 415 ATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELP 456 (596)
Q Consensus 415 ~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~p 456 (596)
...-+|+|+|.+.|.-...|.+.+ + ..++||||..
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~---~----~~~v~~vD~s 118 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADAL---P----EITTFGLDVS 118 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTC---T----TSEEEEEESC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhC---C----CCeEEEEeCC
Confidence 345689999999987554444432 2 2489999973
No 199
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=23.05 E-value=1.4e+02 Score=27.84 Aligned_cols=45 Identities=13% Similarity=0.023 Sum_probs=28.0
Q ss_pred cCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHH
Q 045079 415 ATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRL 473 (596)
Q Consensus 415 ~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL 473 (596)
.+.-.|+|+|.+.|.--. .|+.+ |+ .+|||||.. ...++.+.+++
T Consensus 55 ~~~~~vLDlGcG~G~~~~----~l~~~--~~--~~v~gvD~s------~~~l~~a~~~~ 99 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQL----LSACE--SF--TEIIVSDYT------DQNLWELQKWL 99 (265)
T ss_dssp CCEEEEEEESCTTCCGGG----TTGGG--TE--EEEEEEESC------HHHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHH----HHhhc--cc--CeEEEecCC------HHHHHHHHHHH
Confidence 556789999999884321 23322 22 699999973 34455554444
No 200
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=22.40 E-value=2.2e+02 Score=27.84 Aligned_cols=111 Identities=13% Similarity=0.166 Sum_probs=54.8
Q ss_pred eeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhc-CCcEEEEeecccccc
Q 045079 417 RLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERF-NVPFEYNVIAQKWET 495 (596)
Q Consensus 417 ~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~-gVPFeF~~Ia~~~E~ 495 (596)
.-+|+|+|.+.| .+...|+++ +|..+||+|+.. ...++.+.+++...+..+ +-.+++.. .....
T Consensus 79 ~~~VLdiG~G~G----~~~~~l~~~---~~~~~v~~vDid------~~~i~~a~~~~~~~~~~~~~~~v~~~~--~D~~~ 143 (283)
T 2i7c_A 79 PKNVLVVGGGDG----GIIRELCKY---KSVENIDICEID------ETVIEVSKIYFKNISCGYEDKRVNVFI--EDASK 143 (283)
T ss_dssp CCEEEEEECTTS----HHHHHHTTC---TTCCEEEEEESC------HHHHHHHHHHCTTTSGGGGSTTEEEEE--SCHHH
T ss_pred CCeEEEEeCCcC----HHHHHHHHc---CCCCEEEEEECC------HHHHHHHHHHhHHhccccCCCcEEEEE--CChHH
Confidence 358999999988 355566654 245799999973 244554444443322112 11234432 11111
Q ss_pred -cCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeeee
Q 045079 496 -IRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGIS 551 (596)
Q Consensus 496 -i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e~ 551 (596)
+.. . -..=++|++++.... ...+.. -...+++.+ +.|+|+-+++...
T Consensus 144 ~l~~--~-~~~fD~Ii~d~~~~~--~~~~~l----~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 144 FLEN--V-TNTYDVIIVDSSDPI--GPAETL----FNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp HHHH--C-CSCEEEEEEECCCTT--TGGGGG----SSHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHh--C-CCCceEEEEcCCCCC--Ccchhh----hHHHHHHHHHHhcCCCcEEEEEC
Confidence 100 0 011246776653221 111100 014677776 5679998776543
No 201
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=22.27 E-value=2.3e+02 Score=24.64 Aligned_cols=107 Identities=13% Similarity=-0.002 Sum_probs=54.4
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--EEEEeecccc
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP--FEYNVIAQKW 493 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP--FeF~~Ia~~~ 493 (596)
+.-+|+|+|.+.|.-- ..++.+. .-++||||.. ...++.+.+++. ..+++ .+|.. ..+
T Consensus 44 ~~~~vLD~GcG~G~~~----~~~~~~~----~~~v~~vD~~------~~~~~~a~~~~~----~~~~~~~~~~~~--~d~ 103 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLA----IEAVSRG----MDKSICIEKN------FAALKVIKENIA----ITKEPEKFEVRK--MDA 103 (187)
T ss_dssp SSCEEEETTCTTCHHH----HHHHHTT----CSEEEEEESC------HHHHHHHHHHHH----HHTCGGGEEEEE--SCH
T ss_pred CCCCEEEeCCccCHHH----HHHHHcC----CCEEEEEECC------HHHHHHHHHHHH----HhCCCcceEEEE--CcH
Confidence 3458999999988532 2233332 3589999973 344554444433 33543 44433 233
Q ss_pred cccCccccc--ccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH---HhhCCcEEEeeeecCC
Q 045079 494 ETIRLEDFK--IDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI---KRINPDVFIHGISNGT 554 (596)
Q Consensus 494 E~i~~edL~--i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I---r~L~P~Vfv~~e~n~~ 554 (596)
.+... .+. -..=++|+.|..|..+ ....++..+ +-|+|.-+++......
T Consensus 104 ~~~~~-~~~~~~~~fD~i~~~~~~~~~-----------~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 104 NRALE-QFYEEKLQFDLVLLDPPYAKQ-----------EIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp HHHHH-HHHHTTCCEEEEEECCCGGGC-----------CHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred HHHHH-HHHhcCCCCCEEEECCCCCch-----------hHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 22111 000 0111466666554311 123456655 4478987776655443
No 202
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=21.61 E-value=2.1e+02 Score=27.79 Aligned_cols=97 Identities=11% Similarity=-0.015 Sum_probs=51.6
Q ss_pred eEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc-EEEEeeccccccc
Q 045079 418 LHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP-FEYNVIAQKWETI 496 (596)
Q Consensus 418 vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP-FeF~~Ia~~~E~i 496 (596)
=.|+|+|.+.|.--..| |.+- +..++||||.. .+.++.+. +-|+..|++ .+| +....+++
T Consensus 121 ~~VLDlgcG~G~~s~~l----a~~~---~~~~V~~vD~s------~~av~~a~----~n~~~n~l~~~~~--~~~d~~~~ 181 (272)
T 3a27_A 121 EVVVDMFAGIGYFTIPL----AKYS---KPKLVYAIEKN------PTAYHYLC----ENIKLNKLNNVIP--ILADNRDV 181 (272)
T ss_dssp CEEEETTCTTTTTHHHH----HHHT---CCSEEEEEECC------HHHHHHHH----HHHHHTTCSSEEE--EESCGGGC
T ss_pred CEEEEecCcCCHHHHHH----HHhC---CCCEEEEEeCC------HHHHHHHH----HHHHHcCCCCEEE--EECChHHc
Confidence 36899999998643333 3321 13589999973 23444433 334455653 443 33344433
Q ss_pred CcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHHhhCCcEEEeee
Q 045079 497 RLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGI 550 (596)
Q Consensus 497 ~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir~L~P~Vfv~~e 550 (596)
.. -..=++|++|... ...+.+...++.|+|.-++++.
T Consensus 182 -~~---~~~~D~Vi~d~p~-------------~~~~~l~~~~~~LkpgG~l~~s 218 (272)
T 3a27_A 182 -EL---KDVADRVIMGYVH-------------KTHKFLDKTFEFLKDRGVIHYH 218 (272)
T ss_dssp -CC---TTCEEEEEECCCS-------------SGGGGHHHHHHHEEEEEEEEEE
T ss_pred -Cc---cCCceEEEECCcc-------------cHHHHHHHHHHHcCCCCEEEEE
Confidence 21 0111456665332 1233455557889998766543
No 203
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=21.56 E-value=5.8e+02 Score=24.98 Aligned_cols=135 Identities=13% Similarity=0.110 Sum_probs=68.1
Q ss_pred eeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcC-CcEEEEeecccccc
Q 045079 417 RLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFN-VPFEYNVIAQKWET 495 (596)
Q Consensus 417 ~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~g-VPFeF~~Ia~~~E~ 495 (596)
.-+|+|+|.+.|. +...|+++. |..+||+|+.. ...++.+.+++..++..++ -.+++.. ....+
T Consensus 91 ~~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDid------~~~~~~a~~~~~~~~~~~~~~~v~~~~--~D~~~ 155 (296)
T 1inl_A 91 PKKVLIIGGGDGG----TLREVLKHD---SVEKAILCEVD------GLVIEAARKYLKQTSCGFDDPRAEIVI--ANGAE 155 (296)
T ss_dssp CCEEEEEECTTCH----HHHHHTTST---TCSEEEEEESC------HHHHHHHHHHCHHHHGGGGCTTEEEEE--SCHHH
T ss_pred CCEEEEEcCCcCH----HHHHHHhcC---CCCEEEEEECC------HHHHHHHHHHhHhhccccCCCceEEEE--CcHHH
Confidence 3589999999883 555666553 34799999973 3556666666665544442 2244432 11111
Q ss_pred -cCcccccccCCCeEEEEeecc-ccCCCCCCcCCCCcHHHHHHHH-HhhCCcEEEeeeecCCCCcchhHHHHHHHHHHHH
Q 045079 496 -IRLEDFKIDRDEVTVVNCVHR-MKNLPDDTVVDSSPRDAVLDLI-KRINPDVFIHGISNGTYNAPFFLARFREALFHFS 572 (596)
Q Consensus 496 -i~~edL~i~~dE~LaVN~~f~-Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vfv~~e~n~~~nsp~F~~RF~EAL~~YS 572 (596)
+.. . -..=++|+++.... +... .. --...+++.+ +.|+|+-+++.....-+. -...+.+.+....
T Consensus 156 ~l~~--~-~~~fD~Ii~d~~~~~~~~~--~~----l~~~~~l~~~~~~LkpgG~lv~~~~~~~~---~~~~~~~~~~~l~ 223 (296)
T 1inl_A 156 YVRK--F-KNEFDVIIIDSTDPTAGQG--GH----LFTEEFYQACYDALKEDGVFSAETEDPFY---DIGWFKLAYRRIS 223 (296)
T ss_dssp HGGG--C-SSCEEEEEEEC----------------CCSHHHHHHHHHHEEEEEEEEEECCCTTT---THHHHHHHHHHHH
T ss_pred HHhh--C-CCCceEEEEcCCCcccCch--hh----hhHHHHHHHHHHhcCCCcEEEEEccCccc---CHHHHHHHHHHHH
Confidence 110 0 01124677664321 1100 00 0014566665 567999877664322111 1345556666666
Q ss_pred HHhhhh
Q 045079 573 AMFDIF 578 (596)
Q Consensus 573 AlFDsL 578 (596)
..|...
T Consensus 224 ~~F~~v 229 (296)
T 1inl_A 224 KVFPIT 229 (296)
T ss_dssp HHCSEE
T ss_pred HHCCce
Confidence 666543
No 204
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=21.43 E-value=1.1e+02 Score=28.87 Aligned_cols=56 Identities=18% Similarity=0.092 Sum_probs=35.2
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--EEEEe
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP--FEYNV 488 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP--FeF~~ 488 (596)
+..+|+|+|.+.|.--..|.+.. |..++||||.. ...++.+.+++ +..|+. ++|..
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-------~~~~v~gvD~s------~~~~~~a~~~~----~~~~~~~~v~~~~ 122 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-------NGWYFLATEVD------DMCFNYAKKNV----EQNNLSDLIKVVK 122 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-------HCCEEEEEESC------HHHHHHHHHHH----HHTTCTTTEEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-------CCCeEEEEECC------HHHHHHHHHHH----HHcCCCccEEEEE
Confidence 45689999999996555555543 23689999973 34455544443 345654 55543
No 205
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=21.27 E-value=1.6e+02 Score=27.39 Aligned_cols=57 Identities=11% Similarity=0.133 Sum_probs=33.1
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHH
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKS 475 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~ 475 (596)
.|++.+.-...-+|+|+|.+.|.--..|.+.+ . |..++|+||.. ...++.+.+++..
T Consensus 87 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~----~~~~v~~~D~~------~~~~~~a~~~~~~ 143 (258)
T 2pwy_A 87 AMVTLLDLAPGMRVLEAGTGSGGLTLFLARAV--G----EKGLVESYEAR------PHHLAQAERNVRA 143 (258)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH--C----TTSEEEEEESC------HHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHh--C----CCCEEEEEeCC------HHHHHHHHHHHHH
Confidence 34454443455689999999885333333333 1 23599999963 3455555444443
No 206
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=21.08 E-value=66 Score=33.66 Aligned_cols=46 Identities=33% Similarity=0.435 Sum_probs=35.2
Q ss_pred cCeeEEEEceeccc----cchHHHHHHHhcC---CC--CCCeEEEEeecCCCCCC
Q 045079 415 ATRLHIIDFGICYG----FQWPCLIQILSSR---PT--GPPMLRITGIELPQPGF 460 (596)
Q Consensus 415 ~~~vHIIDfgI~~G----~QWp~Liq~LA~R---~g--GPP~LRITgI~~pq~gf 460 (596)
.+.+.|.|||.+.| .-+-.+|+.+..+ .+ .+|.+.+..-|+|.--|
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDF 104 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDF 104 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCH
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHH
Confidence 46799999999999 4566777777643 23 47899999999986543
No 207
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=20.91 E-value=95 Score=29.13 Aligned_cols=56 Identities=13% Similarity=0.192 Sum_probs=32.9
Q ss_pred cCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCc--EEEE
Q 045079 415 ATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVP--FEYN 487 (596)
Q Consensus 415 ~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVP--FeF~ 487 (596)
.+.-+|+|+|.+.|.--. .|+... |..+||+||.. ...++.+.++ ++..|++ .+|.
T Consensus 70 ~~~~~vLDiG~G~G~~~~----~la~~~---~~~~v~~vD~~------~~~~~~a~~~----~~~~~~~~~v~~~ 127 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSM----QFASIS---DDIHVTTIERN------ETMIQYAKQN----LATYHFENQVRII 127 (232)
T ss_dssp HTCCEEEEECCSSSHHHH----HHHTTC---TTCEEEEEECC------HHHHHHHHHH----HHHTTCTTTEEEE
T ss_pred cCCCEEEEEeCchhHHHH----HHHHhC---CCCEEEEEECC------HHHHHHHHHH----HHHcCCCCcEEEE
Confidence 345589999999985332 344321 25799999973 3445544433 4445653 4443
No 208
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=20.69 E-value=99 Score=29.63 Aligned_cols=34 Identities=12% Similarity=0.252 Sum_probs=23.8
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQ 457 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq 457 (596)
+.-.|+|+|.+.|. +...|+++ |+ -++||||...
T Consensus 37 ~g~~VLDiGcGtG~----~t~~la~~--g~--~~V~gvDis~ 70 (232)
T 3opn_A 37 NGKTCLDIGSSTGG----FTDVMLQN--GA--KLVYALDVGT 70 (232)
T ss_dssp TTCEEEEETCTTSH----HHHHHHHT--TC--SEEEEECSSC
T ss_pred CCCEEEEEccCCCH----HHHHHHhc--CC--CEEEEEcCCH
Confidence 34579999999985 44555555 32 2899999853
No 209
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=20.18 E-value=2.2e+02 Score=25.47 Aligned_cols=32 Identities=22% Similarity=0.197 Sum_probs=22.5
Q ss_pred CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecC
Q 045079 416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIEL 455 (596)
Q Consensus 416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~ 455 (596)
+.-+|+|+|.+.|. +...|+.+ | .-++||||.
T Consensus 51 ~~~~vlD~gcG~G~----~~~~l~~~--~--~~~v~~vD~ 82 (200)
T 1ne2_A 51 GGRSVIDAGTGNGI----LACGSYLL--G--AESVTAFDI 82 (200)
T ss_dssp BTSEEEEETCTTCH----HHHHHHHT--T--BSEEEEEES
T ss_pred CCCEEEEEeCCccH----HHHHHHHc--C--CCEEEEEEC
Confidence 34589999999886 34445554 1 248999997
No 210
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=20.12 E-value=2.1e+02 Score=27.34 Aligned_cols=41 Identities=22% Similarity=0.142 Sum_probs=26.4
Q ss_pred HHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 045079 407 TIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELP 456 (596)
Q Consensus 407 aIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~p 456 (596)
.|++++.-...-+|+|+|.|.|.- ...|+.+. -++||||..
T Consensus 21 ~i~~~~~~~~~~~VLDiG~G~G~l----t~~l~~~~-----~~v~~vD~~ 61 (244)
T 1qam_A 21 KIMTNIRLNEHDNIFEIGSGKGHF----TLELVQRC-----NFVTAIEID 61 (244)
T ss_dssp HHHTTCCCCTTCEEEEECCTTSHH----HHHHHHHS-----SEEEEECSC
T ss_pred HHHHhCCCCCCCEEEEEeCCchHH----HHHHHHcC-----CeEEEEECC
Confidence 344444334456899999999853 34444442 489999973
No 211
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=20.09 E-value=77 Score=32.03 Aligned_cols=55 Identities=18% Similarity=0.261 Sum_probs=36.6
Q ss_pred HHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHH
Q 045079 409 RKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSY 476 (596)
Q Consensus 409 leA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~ 476 (596)
++.+.-...-+|+|.|.+.|.....|++.+. ..++||||.. .+.++.+.+++..+
T Consensus 19 l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~-------~~~VigvD~d------~~al~~A~~~~~~~ 73 (301)
T 1m6y_A 19 IEFLKPEDEKIILDCTVGEGGHSRAILEHCP-------GCRIIGIDVD------SEVLRIAEEKLKEF 73 (301)
T ss_dssp HHHHCCCTTCEEEETTCTTSHHHHHHHHHCT-------TCEEEEEESC------HHHHHHHHHHTGGG
T ss_pred HHhcCCCCCCEEEEEeCCcCHHHHHHHHHCC-------CCEEEEEECC------HHHHHHHHHHHHhc
Confidence 3444333344899999999977766666541 3589999963 45677776666543
Done!