Query 045083
Match_columns 556
No_of_seqs 474 out of 3218
Neff 10.5
Searched_HMMs 29240
Date Mon Mar 25 17:01:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045083.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045083hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 2.4E-50 8.1E-55 411.6 31.6 334 3-366 16-366 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 4.3E-50 1.5E-54 409.6 33.0 297 23-365 3-299 (437)
3 4g8k_A 2-5A-dependent ribonucl 100.0 2.6E-43 8.7E-48 346.6 26.2 289 3-340 27-330 (337)
4 3utm_A Tankyrase-1; tankyrase, 100.0 1.8E-42 6E-47 342.8 25.7 292 3-352 26-321 (351)
5 1wdy_A 2-5A-dependent ribonucl 100.0 1.4E-41 5E-46 325.8 24.8 270 33-341 4-283 (285)
6 4g8k_A 2-5A-dependent ribonucl 100.0 3.3E-41 1.1E-45 331.5 26.8 293 32-369 23-326 (337)
7 1wdy_A 2-5A-dependent ribonucl 100.0 1.1E-40 3.9E-45 319.6 28.8 263 80-372 3-281 (285)
8 2fo1_E LIN-12 protein; beta-ba 100.0 8.3E-42 2.9E-46 339.9 17.3 314 2-367 38-369 (373)
9 3d9h_A CDNA FLJ77766, highly s 100.0 6.2E-40 2.1E-44 313.9 22.8 256 32-333 13-275 (285)
10 3d9h_A CDNA FLJ77766, highly s 100.0 1.7E-39 5.7E-44 310.9 24.8 265 78-366 11-275 (285)
11 2xai_A ASB-9, ankyrin repeat a 100.0 1.8E-39 6.3E-44 306.7 22.3 247 81-362 2-256 (261)
12 2fo1_E LIN-12 protein; beta-ba 100.0 1.6E-40 5.5E-45 330.6 14.6 282 6-336 71-371 (373)
13 3utm_A Tankyrase-1; tankyrase, 100.0 1.9E-39 6.3E-44 321.1 20.3 294 18-368 8-304 (351)
14 1yyh_A HN1;, notch 1, ankyrin 100.0 4.8E-39 1.7E-43 302.4 22.1 230 124-366 3-245 (253)
15 3ljn_A Hypothetical protein; a 100.0 1.4E-39 4.7E-44 323.6 18.7 270 75-366 13-311 (364)
16 1oy3_D Transcription factor in 100.0 1.1E-38 3.7E-43 305.5 22.2 260 75-356 2-270 (282)
17 1yyh_A HN1;, notch 1, ankyrin 100.0 1.3E-38 4.4E-43 299.5 21.6 232 75-335 3-247 (253)
18 1k1a_A B-cell lymphoma 3-encod 100.0 7.5E-38 2.6E-42 292.2 19.8 235 75-332 2-237 (241)
19 3b7b_A Euchromatic histone-lys 100.0 5.2E-37 1.8E-41 285.8 25.2 223 124-360 4-226 (237)
20 3b7b_A Euchromatic histone-lys 100.0 4.8E-37 1.7E-41 286.0 24.2 228 75-332 4-231 (237)
21 2xai_A ASB-9, ankyrin repeat a 100.0 1.4E-36 4.8E-41 286.9 26.8 242 130-390 2-243 (261)
22 1k1a_A B-cell lymphoma 3-encod 100.0 3.1E-37 1.1E-41 288.1 21.4 228 124-365 2-237 (241)
23 3ljn_A Hypothetical protein; a 100.0 5.4E-38 1.9E-42 312.0 16.4 280 3-302 22-314 (364)
24 3aji_A 26S proteasome non-ATPa 100.0 2.1E-36 7E-41 280.6 22.9 224 80-333 4-227 (231)
25 3aji_A 26S proteasome non-ATPa 100.0 3.8E-36 1.3E-40 278.8 24.4 226 128-367 3-228 (231)
26 2dzn_A Probable 26S proteasome 100.0 4.4E-36 1.5E-40 277.7 22.4 214 131-356 2-220 (228)
27 1oy3_D Transcription factor in 100.0 6.3E-37 2.2E-41 293.1 16.7 256 28-323 3-270 (282)
28 3eu9_A Huntingtin-interacting 100.0 1.3E-35 4.5E-40 276.7 24.3 232 76-337 3-236 (240)
29 4b93_B Ankyrin repeat domain-c 100.0 7.9E-37 2.7E-41 288.8 14.0 224 77-323 6-230 (269)
30 2dzn_A Probable 26S proteasome 100.0 2.8E-35 9.6E-40 272.3 21.0 220 82-332 2-226 (228)
31 3eu9_A Huntingtin-interacting 100.0 1.7E-34 5.9E-39 269.1 24.5 230 126-368 4-234 (240)
32 1s70_B 130 kDa myosin-binding 100.0 2.7E-35 9.1E-40 284.4 19.0 250 88-353 4-274 (299)
33 4b93_B Ankyrin repeat domain-c 100.0 1.4E-35 4.8E-40 280.2 15.5 217 126-356 6-230 (269)
34 3kea_A K1L; tropism, ANK repea 100.0 4.4E-35 1.5E-39 280.0 19.0 228 74-342 23-252 (285)
35 2f8y_A Notch homolog 1, transl 100.0 1.3E-34 4.4E-39 266.9 21.5 216 141-369 1-216 (223)
36 1s70_B 130 kDa myosin-binding 100.0 3.2E-36 1.1E-40 290.9 10.8 276 7-335 4-288 (299)
37 3kea_A K1L; tropism, ANK repea 100.0 7.4E-36 2.5E-40 285.4 10.9 241 8-304 6-248 (285)
38 2f8y_A Notch homolog 1, transl 100.0 8.1E-34 2.8E-38 261.5 21.8 212 59-336 5-216 (223)
39 1sw6_A Regulatory protein SWI6 100.0 3.7E-35 1.3E-39 286.3 10.2 273 59-355 33-327 (327)
40 1sw6_A Regulatory protein SWI6 100.0 7.9E-35 2.7E-39 283.9 8.6 258 10-322 28-327 (327)
41 1ikn_D Protein (I-kappa-B-alph 100.0 2E-34 6.8E-39 268.0 7.4 222 77-352 3-227 (236)
42 2rfa_A Transient receptor pote 100.0 3.7E-32 1.3E-36 252.0 21.4 198 130-336 2-222 (232)
43 1ikn_D Protein (I-kappa-B-alph 100.0 1.2E-33 4.2E-38 262.7 9.8 167 200-368 41-208 (236)
44 2rfa_A Transient receptor pote 100.0 2E-32 6.7E-37 253.9 17.8 207 81-304 2-224 (232)
45 3hra_A Ankyrin repeat family p 100.0 3.6E-31 1.2E-35 239.5 21.5 192 131-334 5-201 (201)
46 3hra_A Ankyrin repeat family p 100.0 7.7E-31 2.6E-35 237.4 23.2 193 162-365 2-199 (201)
47 2pnn_A Transient receptor pote 100.0 2.3E-32 7.9E-37 260.0 13.3 230 75-348 6-271 (273)
48 2etb_A Transient receptor pote 100.0 7.4E-31 2.5E-35 247.1 15.9 206 81-335 1-245 (256)
49 2pnn_A Transient receptor pote 100.0 3.4E-31 1.2E-35 251.9 13.4 245 24-315 3-271 (273)
50 2etb_A Transient receptor pote 100.0 9.1E-31 3.1E-35 246.5 14.9 211 130-368 1-245 (256)
51 4gpm_A Engineered protein OR26 100.0 3.8E-31 1.3E-35 230.5 11.2 158 2-191 5-162 (169)
52 4gpm_A Engineered protein OR26 100.0 2.2E-29 7.6E-34 219.3 19.4 156 169-338 8-163 (169)
53 3jxi_A Vanilloid receptor-rela 100.0 5.8E-30 2E-34 241.6 12.0 202 128-336 2-250 (260)
54 3jxi_A Vanilloid receptor-rela 100.0 3.1E-29 1.1E-33 236.6 16.1 206 79-303 2-251 (260)
55 4hbd_A KN motif and ankyrin re 100.0 3.7E-28 1.3E-32 230.7 15.7 189 167-366 78-272 (276)
56 3v30_A DNA-binding protein rfx 100.0 7.8E-28 2.7E-32 211.7 16.4 169 166-347 3-171 (172)
57 2aja_A Ankyrin repeat family p 100.0 2.2E-31 7.5E-36 261.7 -7.3 288 11-361 44-366 (376)
58 4hbd_A KN motif and ankyrin re 100.0 6.4E-28 2.2E-32 229.1 16.8 189 132-334 77-273 (276)
59 2rfm_A Putative ankyrin repeat 100.0 1E-27 3.5E-32 215.0 16.6 163 74-260 27-189 (192)
60 2rfm_A Putative ankyrin repeat 100.0 2.1E-27 7.3E-32 212.9 18.4 162 198-367 29-190 (192)
61 3v31_A Ankyrin repeat family A 99.9 1.6E-26 5.4E-31 202.2 20.0 156 203-366 2-157 (167)
62 3v30_A DNA-binding protein rfx 99.9 4.9E-27 1.7E-31 206.6 16.1 170 131-314 2-171 (172)
63 2aja_A Ankyrin repeat family p 99.9 1.8E-30 6.1E-35 255.2 -7.0 270 4-330 68-368 (376)
64 1ihb_A P18-INK4C(INK6), cyclin 99.9 6.2E-27 2.1E-31 203.7 16.2 156 166-335 6-161 (162)
65 1ihb_A P18-INK4C(INK6), cyclin 99.9 5.1E-27 1.7E-31 204.3 15.3 156 82-261 5-160 (162)
66 3v31_A Ankyrin repeat family A 99.9 1.6E-26 5.5E-31 202.2 18.3 157 81-261 2-158 (167)
67 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.6E-26 5.4E-31 202.6 17.7 157 79-259 11-167 (169)
68 1awc_B Protein (GA binding pro 99.9 2.2E-26 7.5E-31 198.1 17.5 150 205-363 3-152 (153)
69 2y1l_E Darpin-8.4; hydrolase-i 99.9 2.8E-26 9.6E-31 201.0 18.1 156 201-364 11-166 (169)
70 3twr_A Tankyrase-2; ankyrin re 99.9 1.8E-26 6.1E-31 201.4 13.9 157 200-364 4-160 (165)
71 3f6q_A Integrin-linked protein 99.9 3.6E-26 1.2E-30 202.4 15.4 165 165-342 5-169 (179)
72 3f6q_A Integrin-linked protein 99.9 5.5E-26 1.9E-30 201.2 16.1 161 202-369 3-163 (179)
73 1awc_B Protein (GA binding pro 99.9 1.2E-25 4.1E-30 193.5 17.6 150 166-330 3-152 (153)
74 2vge_A RELA-associated inhibit 99.9 3E-29 1E-33 230.8 -6.0 180 165-361 21-205 (229)
75 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.2E-25 4E-30 194.3 16.5 151 205-364 3-153 (156)
76 3twr_A Tankyrase-2; ankyrin re 99.9 6.8E-26 2.3E-30 197.7 14.5 160 127-300 4-163 (165)
77 2vge_A RELA-associated inhibit 99.9 4.3E-29 1.5E-33 229.9 -6.4 145 77-244 16-162 (229)
78 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.8E-25 9.6E-30 191.9 16.0 153 82-259 2-154 (156)
79 1ycs_B 53BP2, P53BP2; ankyrin 99.9 2.4E-26 8.3E-31 213.5 7.2 179 163-356 3-193 (239)
80 1ycs_B 53BP2, P53BP2; ankyrin 99.9 2.2E-25 7.7E-30 207.0 8.2 159 79-262 2-163 (239)
81 1bi7_B P16INK4A, MTS1, multipl 99.9 3.2E-24 1.1E-28 185.1 10.8 143 200-351 8-151 (156)
82 1d9s_A Cyclin-dependent kinase 99.9 1.5E-23 5E-28 176.3 11.5 132 73-228 3-135 (136)
83 1d9s_A Cyclin-dependent kinase 99.9 8.4E-23 2.9E-27 171.7 15.3 127 232-366 6-133 (136)
84 3t8k_A Uncharacterized protein 99.9 7E-24 2.4E-28 187.8 9.0 159 166-339 7-182 (186)
85 3t8k_A Uncharacterized protein 99.9 1.3E-23 4.3E-28 186.1 9.2 152 204-364 6-174 (186)
86 1bi7_B P16INK4A, MTS1, multipl 99.9 5E-23 1.7E-27 177.6 10.2 142 77-243 7-149 (156)
87 1n0r_A 4ANK, 4 ankyrin repeats 99.9 6.5E-22 2.2E-26 163.8 16.0 126 203-336 1-126 (126)
88 2jab_A H10-2-G3; HER2, darpin, 99.9 4.6E-22 1.6E-26 167.2 13.3 127 200-334 10-136 (136)
89 3ui2_A Signal recognition part 99.9 7.5E-23 2.6E-27 190.3 8.8 171 32-261 13-183 (244)
90 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.1E-21 3.7E-26 162.5 14.9 125 81-228 1-125 (126)
91 2jab_A H10-2-G3; HER2, darpin, 99.9 5.1E-22 1.8E-26 166.9 12.9 126 233-365 9-134 (136)
92 3c5r_A BARD-1, BRCA1-associate 99.9 2.7E-22 9.2E-27 168.9 8.6 123 233-362 5-127 (137)
93 3deo_A Signal recognition part 99.9 1.4E-22 4.9E-27 179.7 6.8 142 78-260 40-181 (183)
94 3deo_A Signal recognition part 99.9 3E-23 1E-27 184.2 2.0 164 7-226 6-181 (183)
95 3aaa_C Myotrophin, protein V-1 99.9 2.1E-21 7.2E-26 160.0 10.6 112 235-353 4-115 (123)
96 3c5r_A BARD-1, BRCA1-associate 99.8 1.6E-21 5.4E-26 164.1 7.4 127 77-226 5-131 (137)
97 1dcq_A PYK2-associated protein 99.8 1.4E-20 4.7E-25 178.1 13.6 131 239-370 131-264 (278)
98 2b0o_E UPLC1; arfgap, structur 99.8 6.4E-21 2.2E-25 182.5 11.4 141 204-357 151-299 (301)
99 3ui2_A Signal recognition part 99.8 1E-20 3.4E-25 175.9 11.0 143 127-301 41-184 (244)
100 3ehr_A Osteoclast-stimulating 99.8 5.1E-21 1.7E-25 175.5 8.7 136 200-343 69-205 (222)
101 3aaa_C Myotrophin, protein V-1 99.8 1.8E-20 6.3E-25 154.3 9.6 115 200-322 3-117 (123)
102 2b0o_E UPLC1; arfgap, structur 99.8 1E-19 3.5E-24 174.1 16.0 138 133-289 153-298 (301)
103 3ehr_A Osteoclast-stimulating 99.8 1.2E-20 3.9E-25 173.1 8.7 130 234-370 69-199 (222)
104 1dcq_A PYK2-associated protein 99.8 1.6E-19 5.5E-24 170.8 14.2 194 127-336 62-263 (278)
105 1n0q_A 3ANK, 3 ankyrin repeats 99.8 9.4E-19 3.2E-23 136.0 11.8 91 238-335 2-92 (93)
106 1n0q_A 3ANK, 3 ankyrin repeats 99.8 7.9E-19 2.7E-23 136.5 11.1 92 81-189 1-92 (93)
107 3jue_A Arfgap with coiled-coil 99.8 9.6E-19 3.3E-23 171.1 13.3 146 200-353 195-346 (368)
108 3lvq_E ARF-GAP with SH3 domain 99.8 2.1E-18 7.1E-23 177.5 15.0 135 205-353 133-276 (497)
109 2l6b_A NR1C; ankyrin, consensu 99.8 4.3E-19 1.5E-23 144.1 7.4 108 233-347 4-111 (115)
110 3lvq_E ARF-GAP with SH3 domain 99.8 3.6E-19 1.2E-23 183.2 8.1 134 3-174 134-276 (497)
111 3jue_A Arfgap with coiled-coil 99.8 5.4E-18 1.8E-22 165.8 13.5 122 131-260 199-323 (368)
112 2l6b_A NR1C; ankyrin, consensu 99.7 8.5E-18 2.9E-22 136.4 9.1 108 77-207 4-111 (115)
113 2zgd_A 3 repeat synthetic anky 99.7 2.8E-16 9.7E-21 126.1 10.2 92 271-363 18-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 1.9E-16 6.3E-21 127.2 9.1 96 72-184 14-109 (110)
115 1gp8_A Protein (scaffolding pr 76.6 0.83 2.8E-05 26.6 0.9 22 2-23 14-35 (40)
116 3k49_A MRNA-binding protein PU 70.1 9.9 0.00034 36.4 7.4 199 126-332 73-285 (369)
117 3gvo_A Pumilio 2, pumilio homo 65.7 3.1 0.00011 39.7 2.8 97 127-226 141-239 (351)
118 3gvo_A Pumilio 2, pumilio homo 63.1 12 0.0004 35.6 6.3 194 126-325 68-267 (351)
119 3k49_A MRNA-binding protein PU 52.3 15 0.00052 35.1 5.0 41 7-47 48-91 (369)
120 3mkq_B Coatomer subunit alpha; 34.1 1.9E+02 0.0064 24.0 8.2 132 83-261 9-141 (177)
121 4ev6_A Magnesium transport pro 33.7 32 0.0011 32.3 4.0 21 495-515 281-301 (339)
122 2knc_A Integrin alpha-IIB; tra 31.4 1.1E+02 0.0036 19.8 4.7 33 520-553 11-43 (54)
123 2l8s_A Integrin alpha-1; trans 29.4 1.1E+02 0.0039 19.6 4.7 34 519-553 7-40 (54)
124 3mkq_B Coatomer subunit alpha; 24.7 1.1E+02 0.0036 25.6 5.0 51 129-188 90-141 (177)
125 2iub_A CORA, divalent cation t 23.6 71 0.0024 30.3 4.4 21 495-515 305-325 (363)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.4e-50 Score=411.59 Aligned_cols=334 Identities=27% Similarity=0.331 Sum_probs=249.7
Q ss_pred HHHHHHHhcCCchHHHHhhhhhcccccccCCCCeeEEeeeccccccccccccccccchHHHHHHHHhhCccccccccCCC
Q 045083 3 RKLYEAAAKGDIEPFREIARDELESIVTDVMKNTVLHVNIMRSHLTLQTEEGEISSESTEFVEQILDLCPSLLFQANAKG 82 (556)
Q Consensus 3 ~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g 82 (556)
++||.|++.|+.++|++|+++|++++..+..|.||||+|+..|+. +++++|++. +..++..+.+|
T Consensus 16 t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~-----------~~v~~Ll~~----g~~~~~~~~~g 80 (437)
T 1n11_A 16 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHT-----------EVAKYLLQN----KAKVNAKAKDD 80 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCH-----------HHHHHHHHH----TCCSSCCCTTS
T ss_pred CHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH-----------HHHHHHHhC----CCCCCCCCCCC
Confidence 689999999999999999999999999999999999999999999 999999654 55678889999
Q ss_pred ChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhh-----------HHHHHHH------hhhccCCCcHhHHHHhcCCHH
Q 045083 83 DSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVE-----------SAARQIL------KMTNEEQNTPLHEAVRLRSVD 145 (556)
Q Consensus 83 ~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~-----------~~~~~~l------~~~~~~g~t~Lh~A~~~g~~~ 145 (556)
.||||+|+..|+.++|++|+++|++.+.....+.. ...+.++ ...+..|.||||+|+..|+.+
T Consensus 81 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~ 160 (437)
T 1n11_A 81 QTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVR 160 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred CCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHH
Confidence 99999999999999999999998875332111111 1112222 123455667777777777777
Q ss_pred HHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHh
Q 045083 146 VVKILIKADPHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIK 225 (556)
Q Consensus 146 ~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 225 (556)
++++|++++.+++ ..+..|.||||+|+..|+.+++++|++++.+... .+..|.||||.|+..|+.+++++|++
T Consensus 161 ~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~~~~Ll~ 233 (437)
T 1n11_A 161 VAELLLERDAHPN-AAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHS------PAWNGYTPLHIAAKQNQVEVARSLLQ 233 (437)
T ss_dssp HHHHHHHTTCCTT-CCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCC------CCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHhCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC------cCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 7777777766665 5566677777777777777777777776654322 45667777777777777777777777
Q ss_pred cCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCc
Q 045083 226 ADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPY 305 (556)
Q Consensus 226 ~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~ 305 (556)
.+.+. +..+..|.||||+|+..|+.+++++|++.+.+ .+..+..|.||||+|+..|+.+++++|+++|.+++
T Consensus 234 ~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~- 305 (437)
T 1n11_A 234 YGGSA-NAESVQGVTPLHLAAQEGHAEMVALLLSKQAN------GNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVD- 305 (437)
T ss_dssp TTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC------TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT-
T ss_pred cCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCC-
Confidence 77663 56667777777777777777777777777653 34566777777777777777777777777777765
Q ss_pred cccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCChhHHHHHHHh
Q 045083 306 SANRNSETPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVYTYPTDILERVLIV 366 (556)
Q Consensus 306 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~~~~~ 366 (556)
.+|..|+||||+|+.+|+.+++++|+++|++++.+|..|+||||+|+..++.++++.++..
T Consensus 306 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ 366 (437)
T 1n11_A 306 ATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKN 366 (437)
T ss_dssp CCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHC
Confidence 5677777888888877777778877777777777777778888888777777777777664
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.3e-50 Score=409.63 Aligned_cols=297 Identities=27% Similarity=0.355 Sum_probs=199.7
Q ss_pred hhcccccccCCCCeeEEeeeccccccccccccccccchHHHHHHHHhhCccccccccCCCChHHHHHHHhCcHHHHHHHH
Q 045083 23 DELESIVTDVMKNTVLHVNIMRSHLTLQTEEGEISSESTEFVEQILDLCPSLLFQANAKGDSPLHLAAKKGHTAIVEFLI 102 (556)
Q Consensus 23 ~g~~~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll 102 (556)
.|++++..+..|.||||+|+..|+. +++++|++ . +..++..+..|.||||+|+..|+.+++++|+
T Consensus 3 ~g~~~~~~~~~g~t~L~~Aa~~g~~-----------~~v~~Ll~---~-g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll 67 (437)
T 1n11_A 3 PGISGGGGGESGLTPLHVASFMGHL-----------PIVKNLLQ---R-GASPNVSNVKVETPLHMAARAGHTEVAKYLL 67 (437)
T ss_dssp ------------CCHHHHHHHHTCH-----------HHHHHHHH---T-TCCSCCSSSCCCCHHHHHHHHTCHHHHHHHH
T ss_pred CCCCccccCCCCCCHHHHHHHCCCH-----------HHHHHHHH---c-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 5788888899999999999999999 99999954 3 5567788999999999999999999999999
Q ss_pred HHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHH
Q 045083 103 VFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHVSYSANRNSETLLYMAVANGSAEIVA 182 (556)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~ 182 (556)
+.+++ ++.++.+|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.++++
T Consensus 68 ~~g~~----------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g~t~L~~A~~~g~~~~v~ 130 (437)
T 1n11_A 68 QNKAK----------------VNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPN-LATTAGHTPLHIAAREGHVETVL 130 (437)
T ss_dssp HHTCC----------------SSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTT-CCCTTCCCHHHHHHHHTCHHHHH
T ss_pred hCCCC----------------CCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCC-CCCCCCCcHHHHHHHcCCHHHHH
Confidence 99887 34567778888888888888888888888877776 56677778888888888888888
Q ss_pred HHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Q 045083 183 EILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCP 262 (556)
Q Consensus 183 ~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~ 262 (556)
+|++++..... .+..|.||||.|+..|+.+++++|++++.+. +..+.+|.||||+|+..|+.+++++|++.+.
T Consensus 131 ~Ll~~~~~~~~------~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 203 (437)
T 1n11_A 131 ALLEKEASQAC------MTKKGFTPLHVAAKYGKVRVAELLLERDAHP-NAAGKNGLTPLHVAVHHNNLDIVKLLLPRGG 203 (437)
T ss_dssp HHHHTTCCSCC------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCSSCCCHHHHHHHTTCHHHHHHHGGGTC
T ss_pred HHHhCCCCCcC------CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC
Confidence 88777654322 4566667777777777777777777766663 5566666777777777777777777766664
Q ss_pred hhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCC
Q 045083 263 ESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPSPAHEGP 342 (556)
Q Consensus 263 ~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~ 342 (556)
+ .+..+..|.||||+|+..|+.+++++|++.|.+++ ..+..|.||||+|+..|+.+++++|++++++++..|.
T Consensus 204 ~------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 276 (437)
T 1n11_A 204 S------PHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSAN-AESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNK 276 (437)
T ss_dssp C------SCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCT
T ss_pred C------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCC
Confidence 3 23344455556666555555555555555555543 4455555555555555555555555555555555555
Q ss_pred CCCcHHHHHHhcCChhHHHHHHH
Q 045083 343 DGKTALHAAVYTYPTDILERVLI 365 (556)
Q Consensus 343 ~g~t~L~~A~~~~~~~~~~~~~~ 365 (556)
.|.||||+|+..++.++++.++.
T Consensus 277 ~g~t~L~~A~~~~~~~~~~~Ll~ 299 (437)
T 1n11_A 277 SGLTPLHLVAQEGHVPVADVLIK 299 (437)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh
Confidence 55555555555555555555544
No 3
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=2.6e-43 Score=346.60 Aligned_cols=289 Identities=18% Similarity=0.211 Sum_probs=242.6
Q ss_pred HHHHHHHhcCCchHHHHhhhhhcccccccC-CCCeeEEeeeccccccccccccccccchHHHHHHHHhhCccccccccCC
Q 045083 3 RKLYEAAAKGDIEPFREIARDELESIVTDV-MKNTVLHVNIMRSHLTLQTEEGEISSESTEFVEQILDLCPSLLFQANAK 81 (556)
Q Consensus 3 ~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~-~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 81 (556)
++|+.||+.||+++|++|+++|++++..+. .|+||||+|+..|+. +++++|++. +..++..+..
T Consensus 27 t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~-----------~iv~~Ll~~----ga~~~~~~~~ 91 (337)
T 4g8k_A 27 HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSRE-----------DIVELLLRH----GADPVLRKKN 91 (337)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCH-----------HHHHHHHHT----TCCTTCCCTT
T ss_pred hHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCH-----------HHHHHHHHc----CCchhhhccC
Confidence 579999999999999999999999987764 589999999999999 999999553 5667788999
Q ss_pred CChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCCcc--
Q 045083 82 GDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHVSY-- 159 (556)
Q Consensus 82 g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~-- 159 (556)
+.+|++.++..++.++++.+++.+.+ ++..|..|.||||+|+..|+.+++++|+++|++++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~ 155 (337)
T 4g8k_A 92 GATPFILAAIAGSVKLLKLFLSKGAD----------------VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRR 155 (337)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTTCC----------------TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCchhHHHHhcccchhhHHhhhccch----------------hhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhh
Confidence 99999999999999999999988776 566788999999999999999999999998877652
Q ss_pred -------cccCCCCcHHHHHHHcCCHHHHHHHHHh-CCChhHHHHhhhcCCCCCcHhHHHHhcCC----HHHHHHHHhcC
Q 045083 160 -------SANRNSETLLYMAVANGSAEIVAEILQN-CPQSAARQMLEKTNEEQNTPLHEAVRLRR----VDVVKILIKAD 227 (556)
Q Consensus 160 -------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~~ 227 (556)
..+..|.||||+|+..|+.+++++|+++ +.+. +..+..|.|++|.++..+. .+++++|++++
T Consensus 156 ~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~------n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~g 229 (337)
T 4g8k_A 156 KTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADV------NACDNMGRNALIHALLSSDDSDVEAITHLLLDHG 229 (337)
T ss_dssp CCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCT------TCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTT
T ss_pred ccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCc------CccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCC
Confidence 2345688999999999999999999975 4442 2378889999988776543 46888999999
Q ss_pred CCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccc
Q 045083 228 PHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSA 307 (556)
Q Consensus 228 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~ 307 (556)
.++ +.+|.+|+||||+|+..|+.++++.|++.... .++.+|..|+||||+|++.|+.++|++|+++|++++
T Consensus 230 ad~-n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~-----~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n--- 300 (337)
T 4g8k_A 230 ADV-NVRGERGKTPLILAVEKKHLGLVQRLLEQEHI-----EINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD--- 300 (337)
T ss_dssp CCT-TCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTC-----CTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSST---
T ss_pred CCC-CCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCC-----cccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC---
Confidence 885 78889999999999999999999999976422 357888999999999999999999999999998763
Q ss_pred cCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCC
Q 045083 308 NRNSETPLYMAAANGSVKIVAKILQKCPSPAHE 340 (556)
Q Consensus 308 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~ 340 (556)
..+|||+|+++|+.++|++||++|+++|..
T Consensus 301 ---~~~~L~~A~~~~~~~iv~~Ll~~GA~~d~~ 330 (337)
T 4g8k_A 301 ---CGDLVMTARRNYDHSLVKVLLSHGAKEDFH 330 (337)
T ss_dssp ---TCCHHHHHHHTTCHHHHHHHHHTTCCC---
T ss_pred ---CCCHHHHHHHcCCHHHHHHHHHCcCCCCCC
Confidence 457999999999999999999999988754
No 4
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.8e-42 Score=342.79 Aligned_cols=292 Identities=23% Similarity=0.260 Sum_probs=245.1
Q ss_pred HHHHHHHhcCCchHHHHhhhh-hcccccccCCCCeeEEeeeccccccccccccccccchHHHHHHHHhhCccccccccCC
Q 045083 3 RKLYEAAAKGDIEPFREIARD-ELESIVTDVMKNTVLHVNIMRSHLTLQTEEGEISSESTEFVEQILDLCPSLLFQANAK 81 (556)
Q Consensus 3 ~~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 81 (556)
++|+.|++.|+.+.+++|+++ +.+++..|..|+||||+|+..|+. +++++|++ . +..++..|..
T Consensus 26 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~-----------~~v~~Ll~---~-g~~~~~~~~~ 90 (351)
T 3utm_A 26 DELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRV-----------RIVQLLLQ---H-GADVHAKDKG 90 (351)
T ss_dssp HHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCH-----------HHHHHHHH---T-TCCTTCCCTT
T ss_pred hhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCH-----------HHHHHHHH---c-CCCCCccCCC
Confidence 578888888888888887776 777777778888888888888888 88888844 3 4556777888
Q ss_pred CChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCCcccc
Q 045083 82 GDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHVSYSA 161 (556)
Q Consensus 82 g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~ 161 (556)
|.||||+|+..|+.+++++|++++.+ ++..|..|.||||+|+..|+.+++++|+++|.++. ..
T Consensus 91 g~t~L~~A~~~g~~~iv~~Ll~~g~~----------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~ 153 (351)
T 3utm_A 91 GLVPLHNACSYGHYEVTELLLKHGAC----------------VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPT-LV 153 (351)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCC----------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CC
T ss_pred CCcHHHHHHHCCCHHHHHHHHHCCCC----------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-cc
Confidence 88888888888888888888888776 45567788888888888888888888888888776 66
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCH
Q 045083 162 NRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETP 241 (556)
Q Consensus 162 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~ 241 (556)
+..|.+|+++|+..+..+.+++.... .++..++..++.+.++.++..... ....+..|.||
T Consensus 154 ~~~g~~~l~~a~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~t~ 214 (351)
T 3utm_A 154 NCHGKSAVDMAPTPELRERLTYEFKG------------------HSLLQAAREADLAKVKKTLALEII-NFKQPQSHETA 214 (351)
T ss_dssp CTTSCCHHHHCSSHHHHHHHHHHHHH------------------HHHHHHHHTTCHHHHHHHTTTCCT-TCCCTTTCCCH
T ss_pred cCCCCcchHHHhhhhhHHHHHhhhcc------------------cHHHHHHHhccHHHHHHHHHhhcc-cccCCCCCCCH
Confidence 77888888888877777666655432 246777888889999988887655 35678889999
Q ss_pred HHHHHHc---CCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHH
Q 045083 242 LYMAVAN---GSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMA 318 (556)
Q Consensus 242 L~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A 318 (556)
||+|+.. ++.+++++|++.+.+ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|+||||+|
T Consensus 215 L~~A~~~~~~~~~~~~~~Ll~~g~~------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n-~~d~~g~t~L~~A 287 (351)
T 3utm_A 215 LHCAVASLHPKRKQVAELLLRKGAN------VNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMN-ALDSLGQTALHRA 287 (351)
T ss_dssp HHHHHHCCSTTHHHHHHHHHHTTCC------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHH
T ss_pred HHHHHHHhCccHHHHHHHHHHcCCC------cCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCCCCHHHHH
Confidence 9999999 558999999999874 57788999999999999999999999999999986 7899999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q 045083 319 AANGSVKIVAKILQKCPSPAHEGPDGKTALHAAV 352 (556)
Q Consensus 319 ~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~ 352 (556)
+.+|+.+++++|+++|++++.+|..|+||+|+|.
T Consensus 288 ~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a~ 321 (351)
T 3utm_A 288 ALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGN 321 (351)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHSC
T ss_pred HHcCcHHHHHHHHHcCCCCCCcCCCCCChhhhhh
Confidence 9999999999999999999999999999999983
No 5
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.4e-41 Score=325.83 Aligned_cols=270 Identities=19% Similarity=0.255 Sum_probs=156.2
Q ss_pred CCCeeEEeeeccccccccccccccccchHHHHHHHHhhCccccccccCCCChHHHHHHHhCcHHHHHHHHHHhccCCchh
Q 045083 33 MKNTVLHVNIMRSHLTLQTEEGEISSESTEFVEQILDLCPSLLFQANAKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDL 112 (556)
Q Consensus 33 ~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~ 112 (556)
+|+|+||.|+..|+. +++++| ++.+.......+..|.||||+|+..|+.+++++|+++|.+
T Consensus 4 ~g~~~L~~A~~~g~~-----------~~v~~L---l~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~----- 64 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDV-----------DLVQQL---LEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD----- 64 (285)
T ss_dssp HHHHHHHHHHHTTCH-----------HHHHHH---HHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----
T ss_pred ccchHHHHHHHcCCH-----------HHHHHH---HHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-----
Confidence 355666666666666 666666 3333222222255566666666666666666666666554
Q ss_pred hhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChh
Q 045083 113 ERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSA 192 (556)
Q Consensus 113 ~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~ 192 (556)
++..|..|.||||+|+..|+.+++++|+++|.++. ..+..|.||||+|+..|+.+++++|++++.+..
T Consensus 65 -----------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 132 (285)
T 1wdy_A 65 -----------PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVN-ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVN 132 (285)
T ss_dssp -----------TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred -----------CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcc
Confidence 23445566666666666666666666666666654 455566666666666666666666666654332
Q ss_pred HH----HHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhc-CCCCCccCCCCCCCHHHHHHHcCC----HHHHHHHHHcCCh
Q 045083 193 AR----QMLEKTNEEQNTPLHEAVRLRRVDVVKILIKA-DPHVPYSANRNSETPLYMAVANGS----AEIVAEILQNCPE 263 (556)
Q Consensus 193 ~~----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~g~t~L~~A~~~g~----~~~v~~Ll~~~~~ 263 (556)
.. ......+..|.||||.|+..|+.+++++|++. +.+ .+..|..|.||||+|+..++ .+++++|++.+.+
T Consensus 133 ~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~ 211 (285)
T 1wdy_A 133 LRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGAD-VNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD 211 (285)
T ss_dssp CCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCC-TTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCC
T ss_pred cccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCC-CCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCC
Confidence 10 00111245566666666666666666666655 433 35556666666666666666 5666666666543
Q ss_pred hHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHh-cCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCC
Q 045083 264 SAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIE-ADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPSPAHEG 341 (556)
Q Consensus 264 ~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d 341 (556)
++.+|..|+||||+|+..|+.+++++|++ .|.+++ .+|..|+||||+|+++|+.+++++|+++|++++.+|
T Consensus 212 ------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~-~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d 283 (285)
T 1wdy_A 212 ------VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIN-DTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283 (285)
T ss_dssp ------SSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred ------CCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCcc-ccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCccc
Confidence 34555566666666666666666666666 455543 555666666666666666666666666666665554
No 6
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=3.3e-41 Score=331.50 Aligned_cols=293 Identities=18% Similarity=0.225 Sum_probs=254.3
Q ss_pred CCCCeeEEeeeccccccccccccccccchHHHHHHHHhhCccccccccC-CCChHHHHHHHhCcHHHHHHHHHHhccCCc
Q 045083 32 VMKNTVLHVNIMRSHLTLQTEEGEISSESTEFVEQILDLCPSLLFQANA-KGDSPLHLAAKKGHTAIVEFLIVFANRQPI 110 (556)
Q Consensus 32 ~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~ 110 (556)
.+|+|+||.|+++|+. +++++|++. +.+++.++. .|+||||+||..|+.++|++|+++|++
T Consensus 23 ~~~~t~L~~Av~~g~~-----------~~V~~LL~~----Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~--- 84 (337)
T 4g8k_A 23 VEDNHLLIKAVQNEDV-----------DLVQQLLEG----GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD--- 84 (337)
T ss_dssp HHHHHHHHHHHHTTCH-----------HHHHHHHHH----TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC---
T ss_pred CCCChHHHHHHHcCCH-----------HHHHHHHHC----CCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCc---
Confidence 4578999999999999 999999553 556666654 599999999999999999999999987
Q ss_pred hhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Q 045083 111 DLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQ 190 (556)
Q Consensus 111 ~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~ 190 (556)
++.++..+.++++.++..+...++..+++.+.+++ ..|..|.||||+|+..|+.+++++|++++.+
T Consensus 85 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~ 150 (337)
T 4g8k_A 85 -------------PVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVN-ECDFYGFTAFMEAAVYGKVKALKFLYKRGAN 150 (337)
T ss_dssp -------------TTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT-CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred -------------hhhhccCCCchhHHHHhcccchhhHHhhhccchhh-hhccCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 45678999999999999999999999999999987 7889999999999999999999999999865
Q ss_pred hhHH----HHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhc-CCCCCccCCCCCCCHHHHHHHcCC----HHHHHHHHHcC
Q 045083 191 SAAR----QMLEKTNEEQNTPLHEAVRLRRVDVVKILIKA-DPHVPYSANRNSETPLYMAVANGS----AEIVAEILQNC 261 (556)
Q Consensus 191 ~~~~----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~g~t~L~~A~~~g~----~~~v~~Ll~~~ 261 (556)
.... ......+..|.||||.|+..|+.+++++|+++ +.+ ++..|..|.|+++.++..++ .+++++|++++
T Consensus 151 ~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad-~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~g 229 (337)
T 4g8k_A 151 VNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGAD-VNACDNMGRNALIHALLSSDDSDVEAITHLLLDHG 229 (337)
T ss_dssp TTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCC-TTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTT
T ss_pred cchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCC-cCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCC
Confidence 4211 11223567899999999999999999999975 666 57899999999999876554 46889999999
Q ss_pred ChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhc-CCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCC
Q 045083 262 PESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEA-DPHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPSPAHE 340 (556)
Q Consensus 262 ~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~ 340 (556)
.+ ++.+|..|+||||+|+..|+.++++.|++. +.+++ .+|..|+||||+|+++|+.++|++||++|+++|.+
T Consensus 230 ad------~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn-~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~ 302 (337)
T 4g8k_A 230 AD------VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIN-DTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG 302 (337)
T ss_dssp CC------TTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTT-CBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC
T ss_pred CC------CCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCccc-CcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC
Confidence 74 578889999999999999999999999986 56654 88999999999999999999999999999988754
Q ss_pred CCCCCcHHHHHHhcCChhHHHHHHHhhCC
Q 045083 341 GPDGKTALHAAVYTYPTDILERVLIVRGT 369 (556)
Q Consensus 341 d~~g~t~L~~A~~~~~~~~~~~~~~~~~~ 369 (556)
+|||+|+..++.++++.++..+..
T Consensus 303 -----~~L~~A~~~~~~~iv~~Ll~~GA~ 326 (337)
T 4g8k_A 303 -----DLVMTARRNYDHSLVKVLLSHGAK 326 (337)
T ss_dssp -----CHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred -----CHHHHHHHcCCHHHHHHHHHCcCC
Confidence 599999999999999998876543
No 7
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-40 Score=319.62 Aligned_cols=263 Identities=21% Similarity=0.269 Sum_probs=238.1
Q ss_pred CCCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhh-ccCCCcHhHHHHhcCCHHHHHHHHhcCCCCc
Q 045083 80 AKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMT-NEEQNTPLHEAVRLRSVDVVKILIKADPHVS 158 (556)
Q Consensus 80 ~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~-~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~ 158 (556)
.+|.||||.|++.|+.+++++|++.+.+. +.. +..|.||||+|+..|+.+++++|++++.++.
T Consensus 3 ~~g~~~L~~A~~~g~~~~v~~Ll~~g~~~----------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~ 66 (285)
T 1wdy_A 3 VEDNHLLIKAVQNEDVDLVQQLLEGGANV----------------NFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV 66 (285)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTTCCT----------------TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCc----------------ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 35789999999999999999999998763 334 7789999999999999999999999999987
Q ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccC----
Q 045083 159 YSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSA---- 234 (556)
Q Consensus 159 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~---- 234 (556)
..+..|.||||+|+..|+.+++++|++++.+.. ..+..|.||||.|+..|+.+++++|++.+.+.....
T Consensus 67 -~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~ 139 (285)
T 1wdy_A 67 -LRKKNGATPFLLAAIAGSVKLLKLFLSKGADVN------ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKE 139 (285)
T ss_dssp -CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT------CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCH
T ss_pred -ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC------ccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHH
Confidence 678899999999999999999999999987643 378899999999999999999999999998863221
Q ss_pred -----CCCCCCHHHHHHHcCCHHHHHHHHHc-CChhHHHHHhhhcCCCCCchhHHHHhcCC----HHHHHHHHhcCCCCC
Q 045083 235 -----NRNSETPLYMAVANGSAEIVAEILQN-CPESAARQMLEKTNEEQNTPLHEAVRLRS----VDVAKILIEADPHVP 304 (556)
Q Consensus 235 -----~~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~----~~~v~~Ll~~~~~~~ 304 (556)
+..|.||||+|+..|+.+++++|++. +.+ ++..|..|+||||+|+..++ .+++++|++.|++++
T Consensus 140 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~------~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~ 213 (285)
T 1wdy_A 140 DQERLRKGGATALMDAAEKGHVEVLKILLDEMGAD------VNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVN 213 (285)
T ss_dssp HHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCC------TTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSS
T ss_pred HHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCC------CCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCC
Confidence 78899999999999999999999987 553 56788999999999999999 999999999999986
Q ss_pred ccccCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCCCCCCCCcHHHHHHhcCChhHHHHHHHhhCCCCh
Q 045083 305 YSANRNSETPLYMAAANGSVKIVAKILQ-KCPSPAHEGPDGKTALHAAVYTYPTDILERVLIVRGTFKP 372 (556)
Q Consensus 305 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~~~~~~~~~~~ 372 (556)
.+|..|+||||+|+++|+.+++++|++ .|.+++.+|..|+||||+|+..++.++++.++..+.....
T Consensus 214 -~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~ 281 (285)
T 1wdy_A 214 -VRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC 281 (285)
T ss_dssp -CCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCC
T ss_pred -CcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCc
Confidence 778999999999999999999999999 7999999999999999999999999999999887765443
No 8
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=8.3e-42 Score=339.86 Aligned_cols=314 Identities=18% Similarity=0.196 Sum_probs=224.5
Q ss_pred CHHHHHHHhcCCchHHHHhhhhhcccccccCCCCeeEEeeeccccccccccccccccchHHHHHHHHhhCccccccccCC
Q 045083 2 DRKLYEAAAKGDIEPFREIARDELESIVTDVMKNTVLHVNIMRSHLTLQTEEGEISSESTEFVEQILDLCPSLLFQANAK 81 (556)
Q Consensus 2 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 81 (556)
.++|..|+..|+.+.++.++++..... ...++++-+...|+. ++++++.. +..+..
T Consensus 38 ~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~-----------~~~~~~~~---------~~~~~~ 93 (373)
T 2fo1_E 38 QHSLLEASYDGYIKRQRNELQHYSLYP----NPQGYGNGNDFLGDF-----------NHTNLQIP---------TEPEPE 93 (373)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccCCccccchhhhhhhhcccc----CccccCCCCCccccc-----------cccccccc---------cCCCCC
Confidence 456888889999999999998766543 234566778888888 88877632 356889
Q ss_pred CChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhc-cCCCcHhHHHHhcCCHHHHHHHH--------h
Q 045083 82 GDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTN-EEQNTPLHEAVRLRSVDVVKILI--------K 152 (556)
Q Consensus 82 g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~t~Lh~A~~~g~~~~v~~Ll--------~ 152 (556)
|.||||+|+..|+ +++++|++. + ++..| ..|.||||+|+..|+.+++++|+ +
T Consensus 94 g~t~L~~Aa~~~~-~~~~~L~~~--~----------------~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~ 154 (373)
T 2fo1_E 94 SPIKLHTEAAGSY-AITEPITRE--S----------------VNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIA 154 (373)
T ss_dssp CCCHHHHHHHSSS-CCCSCCSTT--T----------------TTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHH
T ss_pred CccHHHHHhcCCc-hHHHHhccc--c----------------ccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHh
Confidence 9999999999665 788877542 1 45566 78999999999999998888776 7
Q ss_pred cCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcC---CC
Q 045083 153 ADPHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKAD---PH 229 (556)
Q Consensus 153 ~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~---~~ 229 (556)
.|.+++ ..|..|.||||+|+..|+.+++++|++++.+... .+..|.||||.|+..|+.+++++|++.+ .+
T Consensus 155 ~ga~vn-~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~------~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~ 227 (373)
T 2fo1_E 155 AGADVN-AMDCDENTPLMLAVLARRRRLVAYLMKAGADPTI------YNKSERSALHQAAANRDFGMMVYMLNSTKLKGD 227 (373)
T ss_dssp TCCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC------CCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHT
T ss_pred cCCCCc-CCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcc------cCCCCCCHHHHHHHCCCHHHHHHHHhcCccccC
Confidence 888887 7789999999999999999999999999876543 7889999999999999999999999987 45
Q ss_pred CCccCCCCCCCHHHHHHHcC---CHHHHHHHHHcCChhHHH--HHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcC-CCC
Q 045083 230 VPYSANRNSETPLYMAVANG---SAEIVAEILQNCPESAAR--QMLEKTNEEQNTPLHEAVRLRSVDVAKILIEAD-PHV 303 (556)
Q Consensus 230 ~~~~~~~~g~t~L~~A~~~g---~~~~v~~Ll~~~~~~~~~--~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~-~~~ 303 (556)
.+..|.+|.||||+|+..+ +.+++++|++.+.+.... ...+..|..|.||||+|+..|+.+++++|++.+ .++
T Consensus 228 -~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~ 306 (373)
T 2fo1_E 228 -IEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNK 306 (373)
T ss_dssp -TSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCT
T ss_pred -hhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCc
Confidence 4778999999999999998 899999999998753210 001235678999999999999999999999987 555
Q ss_pred CccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCChhHHHHHHHhh
Q 045083 304 PYSANRNSETPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVYTYPTDILERVLIVR 367 (556)
Q Consensus 304 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~~~~~~ 367 (556)
+.+|..|+||||+|+.+|+.+++++|+++|++++.+|..|+||||+|+..++.++++.++.++
T Consensus 307 -n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~ 369 (373)
T 2fo1_E 307 -DKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCR 369 (373)
T ss_dssp -TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC
T ss_pred -cCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 488999999999999999999999999999999999999999999999999999998887654
No 9
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.2e-40 Score=313.86 Aligned_cols=256 Identities=23% Similarity=0.317 Sum_probs=142.4
Q ss_pred CCCCeeEEeeeccccccccccccccccchHHHHHHHHhh-------CccccccccCCCChHHHHHHHhCcHHHHHHHHHH
Q 045083 32 VMKNTVLHVNIMRSHLTLQTEEGEISSESTEFVEQILDL-------CPSLLFQANAKGDSPLHLAAKKGHTAIVEFLIVF 104 (556)
Q Consensus 32 ~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~ 104 (556)
..|.|+||+|+..|+. +.+..++..-.. ....++..|..|+||||+|+..|+.+++++|++.
T Consensus 13 ~~~~~~lH~Aa~~g~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~ 81 (285)
T 3d9h_A 13 GLVPRGSHMASMDGKQ-----------GGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQ 81 (285)
T ss_dssp ----------------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred hHHHHHHHHHhhcCCC-----------CCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHC
Confidence 6899999999999997 555554221100 1233566788899999999999999999999988
Q ss_pred hccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHH
Q 045083 105 ANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHVSYSANRNSETLLYMAVANGSAEIVAEI 184 (556)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 184 (556)
+.+ ++.+|.+|.||||+|+..|+.+++++|++.+.+++ ..+..|.||||+|+..|+.+++++|
T Consensus 82 g~~----------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g~t~L~~A~~~~~~~~v~~L 144 (285)
T 3d9h_A 82 GWA----------------VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN-GVTADWHTPLFNACVSGSWDCVNLL 144 (285)
T ss_dssp TCC----------------SCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSS-CCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred CCC----------------CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCHHHHHHHH
Confidence 876 45678889999999999999999999999888876 6677777888888877777777777
Q ss_pred HHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChh
Q 045083 185 LQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPES 264 (556)
Q Consensus 185 l~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~ 264 (556)
++++.+.. .+..|.||||.|+..|+.+++++|++.+.++ +..|.+|.||||+|+..|+.+++++|++.+.+
T Consensus 145 l~~g~~~~-------~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~- 215 (285)
T 3d9h_A 145 LQHGASVQ-------PESDLASPIHEAARRGHVECVNSLIAYGGNI-DHKISHLGTPLYLACENQQRACVKKLLESGAD- 215 (285)
T ss_dssp HHTTCCSS-------CSCTTSCHHHHHHHHTCHHHHHHHHHTTCCT-TCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCC-
T ss_pred HHCCCCCC-------CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCC-
Confidence 77765432 2334555666665555555555555555542 34444455555555555555555555544432
Q ss_pred HHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhc
Q 045083 265 AARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQK 333 (556)
Q Consensus 265 ~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 333 (556)
++ .+..|+||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+ ++.+++++|+++
T Consensus 216 -----~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~-~~d~~g~t~l~~A~--~~~~~~~~Ll~~ 275 (285)
T 3d9h_A 216 -----VN-QGKGQDSPLHAVVRTASEELACLLMDFGADTQ-AKNAEGKRPVELVP--PESPLAQLFLER 275 (285)
T ss_dssp -----TT-CCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCGGGGSC--TTSHHHHHHHHH
T ss_pred -----CC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCCCCHHHHhc--CccHHHHHHHHh
Confidence 11 23444444444444444444444444444433 34444444444444 223444444443
No 10
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=310.89 Aligned_cols=265 Identities=17% Similarity=0.175 Sum_probs=204.8
Q ss_pred ccCCCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCC
Q 045083 78 ANAKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHV 157 (556)
Q Consensus 78 ~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~ 157 (556)
....|.|+||+|+..|+.+.+..++..+........- ....+...|..|.||||+|+..|+.+++++|++.+.++
T Consensus 11 ~~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l-----~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~ 85 (285)
T 3d9h_A 11 SSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRL-----LSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAV 85 (285)
T ss_dssp -------------------------------CCSEEC-----CCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred cchHHHHHHHHHhhcCCCCCcccCCCCccccccchhh-----hhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 4567899999999999988777776654331100000 00014567899999999999999999999999999998
Q ss_pred cccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCC
Q 045083 158 SYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRN 237 (556)
Q Consensus 158 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 237 (556)
+ ..|..|.||||+|+..|+.+++++|++++.+.. ..+..|.||||.|+..|+.+++++|++.+.+.. .+.+
T Consensus 86 ~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~ 156 (285)
T 3d9h_A 86 N-IITADHVSPLHEACLGGHLSCVKILLKHGAQVN------GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ--PESD 156 (285)
T ss_dssp C-EECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSS------CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS--CSCT
T ss_pred C-CcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCC------CCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCC--CCCC
Confidence 7 788899999999999999999999999987643 378999999999999999999999999998853 3456
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHH
Q 045083 238 SETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYM 317 (556)
Q Consensus 238 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~ 317 (556)
|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|++.|++++ .|..|+||||+
T Consensus 157 g~t~L~~A~~~g~~~~v~~Ll~~g~~------~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--~~~~g~t~L~~ 228 (285)
T 3d9h_A 157 LASPIHEAARRGHVECVNSLIAYGGN------IDHKISHLGTPLYLACENQQRACVKKLLESGADVN--QGKGQDSPLHA 228 (285)
T ss_dssp TSCHHHHHHHHTCHHHHHHHHHTTCC------TTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT--CCBTTBCHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCC------CCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC--CCCCCCCHHHH
Confidence 99999999999999999999999874 56788999999999999999999999999999986 48899999999
Q ss_pred HHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCChhHHHHHHHh
Q 045083 318 AAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVYTYPTDILERVLIV 366 (556)
Q Consensus 318 A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~~~~~ 366 (556)
|+..++.+++++|+++|++++.+|.+|+||||+|+. ..++++.++..
T Consensus 229 A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~--~~~~~~~Ll~~ 275 (285)
T 3d9h_A 229 VVRTASEELACLLMDFGADTQAKNAEGKRPVELVPP--ESPLAQLFLER 275 (285)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCT--TSHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhcC--ccHHHHHHHHh
Confidence 999999999999999999999999999999999993 45666666655
No 11
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=306.68 Aligned_cols=247 Identities=24% Similarity=0.342 Sum_probs=218.4
Q ss_pred CCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCCccc
Q 045083 81 KGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHVSYS 160 (556)
Q Consensus 81 ~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~ 160 (556)
+|+||||+|+..|+.+++++|++.|.+ ++.+|.+|.||||+|+..|+.+++++|++.|.+++ .
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~----------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~ 64 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWA----------------VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN-G 64 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC----------------SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-C
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCC----------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-C
Confidence 589999999999999999999999876 45678999999999999999999999999999987 7
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCC
Q 045083 161 ANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSET 240 (556)
Q Consensus 161 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t 240 (556)
.|..|.||||+|+..|+.+++++|++++.+.. .+.+|.||||.|+..|+.+++++|++.+.++ +..|.+|.|
T Consensus 65 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t 136 (261)
T 2xai_A 65 VTADWHTPLFNACVSGSWDCVNLLLQHGASVQ-------PESDLASPIHEAARRGHVECVNSLIAYGGNI-DHKISHLGT 136 (261)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS-------CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBTTTBC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-------CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CcCCCCCCC
Confidence 78999999999999999999999999987653 4567999999999999999999999999985 788999999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHH
Q 045083 241 PLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAA 320 (556)
Q Consensus 241 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 320 (556)
|||+|+..|+.+++++|++.+.+ ++ .+..|+||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+.
T Consensus 137 ~L~~A~~~~~~~~v~~Ll~~g~~------~~-~~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~-~~d~~g~tpl~~A~~ 208 (261)
T 2xai_A 137 PLYLACENQQRACVKKLLESGAD------VN-QGKGQDSPLHAVARTASEELACLLMDFGADTQ-AKNAEGKRPVELVPP 208 (261)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCC------TT-CCBTTBCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCGGGGSCT
T ss_pred HHHHHHHhCCHHHHHHHHHcCCC------CC-CCCCCCChHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCChhhhccc
Confidence 99999999999999999999875 33 37889999999999999999999999999986 789999999999997
Q ss_pred cCCHHHHHHHHhcCCCC--------CCCCCCCCcHHHHHHhcCChhHHHH
Q 045083 321 NGSVKIVAKILQKCPSP--------AHEGPDGKTALHAAVYTYPTDILER 362 (556)
Q Consensus 321 ~~~~~~v~~Ll~~~~~~--------~~~d~~g~t~L~~A~~~~~~~~~~~ 362 (556)
++. +++.|++++... +.+|..|+||+|+|.+....+.++.
T Consensus 209 ~~~--~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~~p~~l~~ 256 (261)
T 2xai_A 209 ESP--LAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQ 256 (261)
T ss_dssp TCT--HHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGSSSCHHHHH
T ss_pred ccc--HHHHHHhccCCccHHHHHHHHHHHHhchhccccCcccCCcHHHHH
Confidence 665 788888876643 4779999999999998765554433
No 12
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.6e-40 Score=330.61 Aligned_cols=282 Identities=22% Similarity=0.217 Sum_probs=223.5
Q ss_pred HHHHhcCCchHHHHhhhhhcccccccCCCCeeEEeeeccccccccccccccccchHHHHHHHHhhCcccccccc-CCCCh
Q 045083 6 YEAAAKGDIEPFREIARDELESIVTDVMKNTVLHVNIMRSHLTLQTEEGEISSESTEFVEQILDLCPSLLFQAN-AKGDS 84 (556)
Q Consensus 6 ~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~g~t 84 (556)
..+...|+.+.++.++... .|..|.|+||+|+..+ . ++++.| .. ..++..| ..|+|
T Consensus 71 ~~~~~~g~~~~~~~~~~~~-----~~~~g~t~L~~Aa~~~-~-----------~~~~~L---~~---~~~n~~d~~~g~t 127 (373)
T 2fo1_E 71 NGNDFLGDFNHTNLQIPTE-----PEPESPIKLHTEAAGS-Y-----------AITEPI---TR---ESVNIIDPRHNRT 127 (373)
T ss_dssp ----------------------------CCCHHHHHHHSS-S-----------CCCSCC---ST---TTTTTCCCSSCCC
T ss_pred CCCCccccccccccccccC-----CCCCCccHHHHHhcCC-c-----------hHHHHh---cc---ccccccCCcCCCC
Confidence 4566678888888876653 4578999999999954 5 566665 22 3456666 78999
Q ss_pred HHHHHHHhCcHHHHHHHH--------HHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCC
Q 045083 85 PLHLAAKKGHTAIVEFLI--------VFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPH 156 (556)
Q Consensus 85 pLh~A~~~g~~~iv~~Ll--------~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~ 156 (556)
|||+|+..|+.+++++|+ +.|++ ++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 128 ~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~----------------vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~ 191 (373)
T 2fo1_E 128 VLHWIASNSSAEKSEDLIVHEAKECIAAGAD----------------VNAMDCDENTPLMLAVLARRRRLVAYLMKAGAD 191 (373)
T ss_dssp HHHHHHCTTCCSCCTTHHHHHHHHHHHTCCC----------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHhcCCC----------------CcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCC
Confidence 999999999999988887 45554 567899999999999999999999999999999
Q ss_pred CcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcC---CHHHHHHHHhcCCCCCc-
Q 045083 157 VSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLR---RVDVVKILIKADPHVPY- 232 (556)
Q Consensus 157 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~---~~~~v~~Ll~~~~~~~~- 232 (556)
++ ..+..|.||||+|+..|+.+++++|++++.. ...++..+..|.||||.|+..+ +.+++++|++.+.+...
T Consensus 192 ~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~---~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~ 267 (373)
T 2fo1_E 192 PT-IYNKSERSALHQAAANRDFGMMVYMLNSTKL---KGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYD 267 (373)
T ss_dssp SC-CCCTTCCCHHHHHHHTTCHHHHHHHTTSHHH---HHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCC
T ss_pred Cc-ccCCCCCCHHHHHHHCCCHHHHHHHHhcCcc---ccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccc
Confidence 87 7788999999999999999999999987521 0113347899999999999998 89999999999988632
Q ss_pred ------cCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCcc
Q 045083 233 ------SANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYS 306 (556)
Q Consensus 233 ------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~ 306 (556)
..|..|.||||+|+..|+.+++++|++.+.. .++.+|..|+||||+|+..|+.+++++|+++|++++ .
T Consensus 268 ~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~-----~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~-~ 341 (373)
T 2fo1_E 268 GAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGS-----NKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVE-A 341 (373)
T ss_dssp SGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCC-----CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS-C
T ss_pred cccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCC-----CccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-C
Confidence 3677999999999999999999999988632 357889999999999999999999999999999986 7
Q ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q 045083 307 ANRNSETPLYMAAANGSVKIVAKILQKCPS 336 (556)
Q Consensus 307 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~ 336 (556)
+|..|+||||+|+.+|+.+++++|++++++
T Consensus 342 ~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 342 VDATDHTARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp CCSSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 899999999999999999999999988765
No 13
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.9e-39 Score=321.05 Aligned_cols=294 Identities=20% Similarity=0.196 Sum_probs=252.1
Q ss_pred HHhhhhhcccccccCCCCeeEEeeeccccccccccccccccchHHHHHHHHhhCccccccccCCCChHHHHHHHhCcHHH
Q 045083 18 REIARDELESIVTDVMKNTVLHVNIMRSHLTLQTEEGEISSESTEFVEQILDLCPSLLFQANAKGDSPLHLAAKKGHTAI 97 (556)
Q Consensus 18 ~~Ll~~g~~~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~i 97 (556)
..|.+.+.+...++..+.++||.|+..|+. +.++.+ +...+..++..|..|.||||+|+..|+.++
T Consensus 8 l~l~~~~~~~~~~~~~~~~~L~~A~~~g~~-----------~~v~~l---l~~~~~~~~~~d~~g~t~L~~A~~~g~~~~ 73 (351)
T 3utm_A 8 LDLADPSAKAVLTGEYKKDELLEAARSGNE-----------EKLMAL---LTPLNVNCHASDGRKSTPLHLAAGYNRVRI 73 (351)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHTCH-----------HHHHHH---CCTTTTTCCCSSTTCCCHHHHHHHTTCHHH
T ss_pred hhccCCceeeeeeccccchhHHHHHHcCCH-----------HHHHHH---HHhcCCCcccCCCCCCCHHHHHHHcCCHHH
Confidence 345566677777778888999999999999 888888 666677788889999999999999999999
Q ss_pred HHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCC
Q 045083 98 VEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHVSYSANRNSETLLYMAVANGS 177 (556)
Q Consensus 98 v~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~ 177 (556)
|++|+++|.+ ++..|..|.||||+|+..|+.+++++|++++++++ ..+..|.||||+|+..|+
T Consensus 74 v~~Ll~~g~~----------------~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~ 136 (351)
T 3utm_A 74 VQLLLQHGAD----------------VHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVN-AMDLWQFTPLHEAASKNR 136 (351)
T ss_dssp HHHHHHTTCC----------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTC
T ss_pred HHHHHHcCCC----------------CCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCC
Confidence 9999998877 45678889999999999999999999999998887 678889999999999999
Q ss_pred HHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHH
Q 045083 178 AEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEI 257 (556)
Q Consensus 178 ~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 257 (556)
.+++++|++++.+... .+..|.+|++.|+..+..+.+++.... .++..++..++.+.++.+
T Consensus 137 ~~~v~~Ll~~g~~~~~------~~~~g~~~l~~a~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~ 197 (351)
T 3utm_A 137 VEVCSLLLSHGADPTL------VNCHGKSAVDMAPTPELRERLTYEFKG-------------HSLLQAAREADLAKVKKT 197 (351)
T ss_dssp HHHHHHHHHTTCCTTC------CCTTSCCHHHHCSSHHHHHHHHHHHHH-------------HHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHcCCCCcc------ccCCCCcchHHHhhhhhHHHHHhhhcc-------------cHHHHHHHhccHHHHHHH
Confidence 9999999998876543 688899999999888877777776542 467888899999999999
Q ss_pred HHcCChhHHHHHhhhcCCCCCchhHHHHhc---CCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcC
Q 045083 258 LQNCPESAARQMLEKTNEEQNTPLHEAVRL---RSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKC 334 (556)
Q Consensus 258 l~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 334 (556)
+..... ....+..|.||||+|+.. ++.+++++|++.|.+++ .+|..|+||||+|+.+|+.+++++|+++|
T Consensus 198 l~~~~~------~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 270 (351)
T 3utm_A 198 LALEII------NFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVN-EKNKDFMTPLHVAAERAHNDVMEVLHKHG 270 (351)
T ss_dssp TTTCCT------TCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHhhcc------cccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcC-CcCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 887653 234567899999999999 56899999999999986 77999999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHhcCChhHHHHHHHhhC
Q 045083 335 PSPAHEGPDGKTALHAAVYTYPTDILERVLIVRG 368 (556)
Q Consensus 335 ~~~~~~d~~g~t~L~~A~~~~~~~~~~~~~~~~~ 368 (556)
++++.+|..|+||||+|+..++.++++.++..+.
T Consensus 271 a~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga 304 (351)
T 3utm_A 271 AKMNALDSLGQTALHRAALAGHLQTCRLLLSYGS 304 (351)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 9999999999999999999999999999887654
No 14
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=4.8e-39 Score=302.42 Aligned_cols=230 Identities=20% Similarity=0.278 Sum_probs=180.9
Q ss_pred HhhhccCCCcHhHHHHhcC-------------CHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Q 045083 124 LKMTNEEQNTPLHEAVRLR-------------SVDVVKILIKADPHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQ 190 (556)
Q Consensus 124 l~~~~~~g~t~Lh~A~~~g-------------~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~ 190 (556)
++.+|.+|.||||+|+..| +.+++++|++.++++....|..|.||||+|+..|+.+++++|++++.+
T Consensus 3 vn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 82 (253)
T 1yyh_A 3 VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD 82 (253)
T ss_dssp -------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 5678999999999999987 899999999999999877899999999999999999999999999876
Q ss_pred hhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHh
Q 045083 191 SAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQML 270 (556)
Q Consensus 191 ~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~ 270 (556)
... .+..|.||||.|+..|+.+++++|++.++...+..+.+|.||||+|+..|+.+++++|++.+.+ +
T Consensus 83 ~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~ 150 (253)
T 1yyh_A 83 ANI------QDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHAD------V 150 (253)
T ss_dssp TTC------CCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCC------T
T ss_pred CCC------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCC------C
Confidence 433 7889999999999999999999999999855688899999999999999999999999999874 5
Q ss_pred hhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHH
Q 045083 271 EKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHA 350 (556)
Q Consensus 271 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~ 350 (556)
+.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+.+|+.+++++|+++|++++.+|..|+||+|+
T Consensus 151 ~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~ 229 (253)
T 1yyh_A 151 NAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKD-MQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDI 229 (253)
T ss_dssp TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHH
Confidence 7888999999999999999999999999999986 779999999999999999999999999999999999999999999
Q ss_pred HHhcCChhHHHHHHHh
Q 045083 351 AVYTYPTDILERVLIV 366 (556)
Q Consensus 351 A~~~~~~~~~~~~~~~ 366 (556)
|+..++.++++++...
T Consensus 230 A~~~g~~~i~~~l~~~ 245 (253)
T 1yyh_A 230 AQERMHHDIVRLLDLE 245 (253)
T ss_dssp HHHTTCHHHHHHHHC-
T ss_pred HHHcCCHHHHHHHHHH
Confidence 9999999998877543
No 15
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.4e-39 Score=323.57 Aligned_cols=270 Identities=21% Similarity=0.240 Sum_probs=230.3
Q ss_pred cccccCCCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcC
Q 045083 75 LFQANAKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKAD 154 (556)
Q Consensus 75 ~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~ 154 (556)
.+..|.+|.||||+||..|+.++|++|+++|.+ ++..|..|.||||+|+..|+.+++++|++.+
T Consensus 13 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~----------------~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g 76 (364)
T 3ljn_A 13 RIKSDDENMEKIHVAARKGQTDEVRRLIETGVS----------------PTIQNRFGCTALHLACKFGCVDTAKYLASVG 76 (364)
T ss_dssp ---CCHHHHHHHHHHHHHTCHHHHHHHHHTTCC----------------TTCCCTTCCCHHHHHHHHCCHHHHHHHHHHC
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----------------ccccCCCCCcHHHHHHHcCCHHHHHHHHHCC
Confidence 456788999999999999999999999999877 5668999999999999999999999999999
Q ss_pred CCCcccccCCCCcHHHHHHHcCCHHHHHHHHHh----CCChhHHH-----------HhhhcCCCCCcHhHHHHhcC--CH
Q 045083 155 PHVSYSANRNSETLLYMAVANGSAEIVAEILQN----CPQSAARQ-----------MLEKTNEEQNTPLHEAVRLR--RV 217 (556)
Q Consensus 155 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~----~~~~~~~~-----------~~~~~~~~g~t~L~~A~~~~--~~ 217 (556)
++.. +..|.||||+|+..|+.+++++|++. +....... ..+..+..|.||||.|+..| +.
T Consensus 77 ~~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~ 153 (364)
T 3ljn_A 77 EVHS---LWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYL 153 (364)
T ss_dssp CCCC---CBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGH
T ss_pred CCcc---ccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchH
Confidence 9654 45899999999999999999999998 54432200 01115678999999999999 99
Q ss_pred HHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHH
Q 045083 218 DVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILI 297 (556)
Q Consensus 218 ~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll 297 (556)
+++++|++.+.++ +..|..|.||||+|+..|+.+++++|++.+++... ..++..|..|+||||+|+..|+.+++++|+
T Consensus 154 ~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 231 (364)
T 3ljn_A 154 EMIKILVQLGASP-TAKDKADETPLMRAMEFRNREALDLMMDTVPSKSS-LRLDYANKQGNSHLHWAILINWEDVAMRFV 231 (364)
T ss_dssp HHHHHHHHHTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSS-CCTTCCCTTCCCTTHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHhccccccc-ccccccCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 9999999999885 78899999999999999999999999998864100 015678899999999999999999999999
Q ss_pred hcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCC------------CCCCCCCCcHHHHHHhcCChhHHHHHHH
Q 045083 298 EADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPSP------------AHEGPDGKTALHAAVYTYPTDILERVLI 365 (556)
Q Consensus 298 ~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~------------~~~d~~g~t~L~~A~~~~~~~~~~~~~~ 365 (556)
++|++++ .+|..|+||||+|+..|+.+++++|+++++++ ...+..|+||++.|+..+..+.+..++.
T Consensus 232 ~~gad~~-~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~~~v~~ll~ 310 (364)
T 3ljn_A 232 EMGIDVN-MEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQ 310 (364)
T ss_dssp TTTCCTT-CCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHHHHHHHHHH
T ss_pred HcCCCCC-CCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccCHHHHHHHHH
Confidence 9999986 78999999999999999999999999997653 2357788999999998887766655544
Q ss_pred h
Q 045083 366 V 366 (556)
Q Consensus 366 ~ 366 (556)
.
T Consensus 311 ~ 311 (364)
T 3ljn_A 311 E 311 (364)
T ss_dssp H
T ss_pred H
Confidence 3
No 16
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.1e-38 Score=305.46 Aligned_cols=260 Identities=22% Similarity=0.238 Sum_probs=191.9
Q ss_pred cccccCCCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcC
Q 045083 75 LFQANAKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKAD 154 (556)
Q Consensus 75 ~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~ 154 (556)
++.+|.+|+||||+|+..|+.++|++|++.+..... ++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 68 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEY-------------LDLQNDLGQTALHLAAILGEASTVEKLYAAG 68 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGG-------------GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccc-------------ccccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 467899999999999999999999999998876321 4668899999999999999999999999999
Q ss_pred CCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHH-------HHhhhcCCCCCcHhHHHHhcCCHHHHHHH-Hhc
Q 045083 155 PHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAAR-------QMLEKTNEEQNTPLHEAVRLRRVDVVKIL-IKA 226 (556)
Q Consensus 155 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-------~~~~~~~~~g~t~L~~A~~~~~~~~v~~L-l~~ 226 (556)
++++ ..+..|.||||+|+..|+.+++++|+++++..... .........+.++++.+...+.......+ ...
T Consensus 69 a~~~-~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (282)
T 1oy3_D 69 AGVL-VAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDW 147 (282)
T ss_dssp CCSS-CCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCG
T ss_pred CCCC-CCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhh
Confidence 9987 77889999999999999999999999987542110 00111234556677776665544333333 333
Q ss_pred CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCC-CCCchhHHHHhcCCHHHHHHHHhcCCCCCc
Q 045083 227 DPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNE-EQNTPLHEAVRLRSVDVAKILIEADPHVPY 305 (556)
Q Consensus 227 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~-~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~ 305 (556)
+.+ .+..+..|.||||+|+..|+.+++++|++.+.+ ++..+. .|+||||+|+..|+.+++++|+++|++++
T Consensus 148 ~~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~- 219 (282)
T 1oy3_D 148 RLQ-LEAENYDGHTPLHVAVIHKDAEMVRLLRDAGAD------LNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPT- 219 (282)
T ss_dssp GGG-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC------TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-
T ss_pred hhc-CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC------CCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCc-
Confidence 333 467899999999999999999999999999975 455554 49999999999999999999999999986
Q ss_pred cccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCC
Q 045083 306 SANRNSETPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVYTYP 356 (556)
Q Consensus 306 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~~~~ 356 (556)
.+|..|+||||+|+.+|+.+++++|+++|++++.+|..|.|||++|.....
T Consensus 220 ~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 220 ARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp CCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC---------------
T ss_pred ccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCCccc
Confidence 789999999999999999999999999999999999999999999987543
No 17
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.3e-38 Score=299.51 Aligned_cols=232 Identities=22% Similarity=0.246 Sum_probs=179.3
Q ss_pred cccccCCCChHHHHHHHhC-------------cHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhc
Q 045083 75 LFQANAKGDSPLHLAAKKG-------------HTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRL 141 (556)
Q Consensus 75 ~~~~~~~g~tpLh~A~~~g-------------~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~ 141 (556)
++.+|.+|.||||+|+..| +.+++++|++.+.+. ....|..|.||||+|+..
T Consensus 3 vn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~---------------~~~~d~~g~t~L~~A~~~ 67 (253)
T 1yyh_A 3 VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASL---------------HNQTDRTGETALHLAARY 67 (253)
T ss_dssp ----------------------------------------------------------------CCCTTSCCHHHHHHHT
T ss_pred CCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCc---------------ccccCCCCCcHHHHHHHc
Confidence 5678999999999999988 899999999988763 234688999999999999
Q ss_pred CCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHH
Q 045083 142 RSVDVVKILIKADPHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVK 221 (556)
Q Consensus 142 g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~ 221 (556)
|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++++... +..+..|.||||.|+..|+.++++
T Consensus 68 g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~-----~~~~~~g~t~L~~A~~~~~~~~v~ 141 (253)
T 1yyh_A 68 SRSDAAKRLLEASADAN-IQDNMGRTPLHAAVSADAQGVFQILIRNRATDL-----DARMHDGTTPLILAARLAVEGMLE 141 (253)
T ss_dssp TCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCT-----TCCCTTCCCHHHHHHHHTCSSHHH
T ss_pred CCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-----cccCCCCCcHHHHHHHcChHHHHH
Confidence 99999999999999987 778999999999999999999999999986432 237889999999999999999999
Q ss_pred HHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCC
Q 045083 222 ILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADP 301 (556)
Q Consensus 222 ~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~ 301 (556)
+|++.+.++ +..|.+|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 142 ~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga 214 (253)
T 1yyh_A 142 DLINSHADV-NAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN------KDMQNNREETPLFLAAREGSYETAKVLLDHFA 214 (253)
T ss_dssp HHHHTTCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 999999985 78899999999999999999999999999875 56788999999999999999999999999999
Q ss_pred CCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCC
Q 045083 302 HVPYSANRNSETPLYMAAANGSVKIVAKILQKCP 335 (556)
Q Consensus 302 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~ 335 (556)
+++ .+|..|+||||+|+++|+.+++++|.....
T Consensus 215 ~~~-~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~ 247 (253)
T 1yyh_A 215 NRD-ITDHMDRLPRDIAQERMHHDIVRLLDLEHH 247 (253)
T ss_dssp CTT-CCCTTCCCHHHHHHHTTCHHHHHHHHC---
T ss_pred Ccc-ccccCCCCHHHHHHHcCCHHHHHHHHHHhh
Confidence 986 789999999999999999999999876543
No 18
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=7.5e-38 Score=292.24 Aligned_cols=235 Identities=24% Similarity=0.345 Sum_probs=133.8
Q ss_pred cccccCCCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcC
Q 045083 75 LFQANAKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKAD 154 (556)
Q Consensus 75 ~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~ 154 (556)
.+.+|.+|+||||+||..|+.+++++|++.......+ ++..|..|.||||+|+..|+.+++++|++.|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 69 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRE------------LDIYNNLRQTPLHLAVITTLPSVVRLLVTAG 69 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCC------------SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCC------------CCcccccCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 3566788888888888888888888888632111000 4556777888888888888888888888887
Q ss_pred CCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccC
Q 045083 155 PHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSA 234 (556)
Q Consensus 155 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~ 234 (556)
.++. ..+..|.||||+|+..|+.+++++|++.++.... .++..+..|.||||.|+..|+.+++++|++.+.+.. ..
T Consensus 70 ~~~~-~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~--~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~ 145 (241)
T 1k1a_A 70 ASPM-ALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTL--DLEARNYDGLTALHVAVNTECQETVQLLLERGADID-AV 145 (241)
T ss_dssp CCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSC--CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CC
T ss_pred CCcc-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc--cccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcc-cc
Confidence 7776 5567777788888877777777777777642100 011244555555555555555555555555555532 22
Q ss_pred C-CCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCC
Q 045083 235 N-RNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSET 313 (556)
Q Consensus 235 ~-~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t 313 (556)
+ ..|.||||+|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|+|
T Consensus 146 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t 218 (241)
T 1k1a_A 146 DIKSGRSPLIHAVENNSLSMVQLLLQHGAN------VNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSS-LKNCHNDT 218 (241)
T ss_dssp CTTTCCCHHHHHHHTTCHHHHHHHHHTTCC------TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCC
T ss_pred cccCCCcHHHHHHHcCCHHHHHHHHHcCCC------CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC-CcCCCCCC
Confidence 2 4455555555555555555555554432 33444445555555555555555555555554443 34444555
Q ss_pred HHHHHHHcCCHHHHHHHHh
Q 045083 314 PLYMAAANGSVKIVAKILQ 332 (556)
Q Consensus 314 ~L~~A~~~~~~~~v~~Ll~ 332 (556)
|||+|+..|+.++++.|++
T Consensus 219 pl~~A~~~~~~~i~~~l~~ 237 (241)
T 1k1a_A 219 PLMVARSRRVIDILRGKAT 237 (241)
T ss_dssp TTTTCSSHHHHHHHTC---
T ss_pred HHHHHHhcCcHHHHhhhcc
Confidence 5555555555555444433
No 19
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=5.2e-37 Score=285.78 Aligned_cols=223 Identities=23% Similarity=0.314 Sum_probs=206.2
Q ss_pred HhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCC
Q 045083 124 LKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEE 203 (556)
Q Consensus 124 l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 203 (556)
++.+|..|.||||+|+..|+.+++++|+++|.+++ ..+..|.||||+|+..|+.+++++|++++.+... .+..
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~ 76 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANID-TCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDP------KDAE 76 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCC------CCTT
T ss_pred cccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcC-ccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCC------CCCC
Confidence 45678999999999999999999999999999987 7788999999999999999999999999866432 6889
Q ss_pred CCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHH
Q 045083 204 QNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHE 283 (556)
Q Consensus 204 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~ 283 (556)
|.||||.|+..|+.+++++|++.++...+..+..|.||||+|+..|+.+++++|++.+.+ ++.++..|.||||+
T Consensus 77 g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~g~t~L~~ 150 (237)
T 3b7b_A 77 GSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSD------INIRDNEENICLHW 150 (237)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC------CCccCCCCCCHHHH
Confidence 999999999999999999999999665688899999999999999999999999999874 56788999999999
Q ss_pred HHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCChhHH
Q 045083 284 AVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVYTYPTDIL 360 (556)
Q Consensus 284 A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~~~~~~~~ 360 (556)
|+..|+.+++++|++.|++++ .+|..|+||||+|+++++.+++++|+++|++++.+|.+|+||||+|+..++.+.+
T Consensus 151 A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~ 226 (237)
T 3b7b_A 151 AAFSGCVDIAEILLAAKCDLH-AVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSA 226 (237)
T ss_dssp HHHHCCHHHHHHHHTTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHH
T ss_pred HHHCCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999986 7789999999999999999999999999999999999999999999998876443
No 20
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=4.8e-37 Score=285.97 Aligned_cols=228 Identities=28% Similarity=0.377 Sum_probs=207.8
Q ss_pred cccccCCCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcC
Q 045083 75 LFQANAKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKAD 154 (556)
Q Consensus 75 ~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~ 154 (556)
++..|.+|.||||+|+..|+.+++++|+++|.+ ++..+..|.||||+|+..|+.+++++|++.+
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~----------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 67 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGAN----------------IDTCSEDQRTPLMEAAENNHLEAVKYLIKAG 67 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCC----------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred cccccCCCCCHHHHHHHcCcHHHHHHHHHcCCC----------------cCccCCCCCCHHHHHHHhCCHHHHHHHHhCC
Confidence 467889999999999999999999999999887 4567889999999999999999999999999
Q ss_pred CCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccC
Q 045083 155 PHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSA 234 (556)
Q Consensus 155 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~ 234 (556)
.++. ..+..|.||||+|+..|+.+++++|+++++... +..+..|.||||.|+..++.+++++|++.+.++ +..
T Consensus 68 ~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~-----~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~ 140 (237)
T 3b7b_A 68 ALVD-PKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDV-----NCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDI-NIR 140 (237)
T ss_dssp CCCC-CCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCT-----TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCC
T ss_pred CCCC-CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCc-----ccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-Ccc
Confidence 9887 678899999999999999999999999984432 227889999999999999999999999999985 788
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCH
Q 045083 235 NRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETP 314 (556)
Q Consensus 235 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~ 314 (556)
+..|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|+||
T Consensus 141 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~-~~d~~g~t~ 213 (237)
T 3b7b_A 141 DNEENICLHWAAFSGCVDIAEILLAAKCD------LHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVT-LKNKEGETP 213 (237)
T ss_dssp CTTSCCHHHHHHHHCCHHHHHHHHTTTCC------TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT-CCCTTSCCH
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHcCCC------CCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCC-ccCCCCCCH
Confidence 99999999999999999999999999874 56788999999999999999999999999999986 789999999
Q ss_pred HHHHHHcCCHHHHHHHHh
Q 045083 315 LYMAAANGSVKIVAKILQ 332 (556)
Q Consensus 315 L~~A~~~~~~~~v~~Ll~ 332 (556)
||+|+.+++.+.+..+++
T Consensus 214 l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 214 LQCASLNSQVWSALQMSK 231 (237)
T ss_dssp HHHSCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999876666543
No 21
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=286.88 Aligned_cols=242 Identities=18% Similarity=0.203 Sum_probs=208.4
Q ss_pred CCCcHhHHHHhcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhH
Q 045083 130 EQNTPLHEAVRLRSVDVVKILIKADPHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLH 209 (556)
Q Consensus 130 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~ 209 (556)
+|+||||+|+..|+.+++++|+++|.+++ ..|..|.||||+|+..|+.+++++|++++.+.. ..+..|.||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~------~~~~~g~t~L~ 74 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVN-IITADHVSPLHEACLGGHLSCVKILLKHGAQVN------GVTADWHTPLF 74 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSS-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT------CCCTTSCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC------CCCCCCCCHHH
Confidence 58999999999999999999999999987 788899999999999999999999999987643 37899999999
Q ss_pred HHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCC
Q 045083 210 EAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRS 289 (556)
Q Consensus 210 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~ 289 (556)
.|+..|+.+++++|++.+++.. .+.+|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+
T Consensus 75 ~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~ 146 (261)
T 2xai_A 75 NACVSGSWDCVNLLLQHGASVQ--PESDLASPIHEAARRGHVECVNSLIAYGGN------IDHKISHLGTPLYLACENQQ 146 (261)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSS--CSCTTCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCBTTTBCHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCcHHHHHHHHHcCCC------CCcCCCCCCCHHHHHHHhCC
Confidence 9999999999999999998863 456699999999999999999999999874 57788999999999999999
Q ss_pred HHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCChhHHHHHHHhhCC
Q 045083 290 VDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVYTYPTDILERVLIVRGT 369 (556)
Q Consensus 290 ~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~~~~~~~~ 369 (556)
.+++++|++.|++++ .+..|+||||+|+..++.+++++|+++|++++.+|.+|+||+|+|+..+ ++++.++.....
T Consensus 147 ~~~v~~Ll~~g~~~~--~~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~~--~~~~~ll~~~~~ 222 (261)
T 2xai_A 147 RACVKKLLESGADVN--QGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPES--PLAQLFLEREGP 222 (261)
T ss_dssp HHHHHHHHHHTCCTT--CCBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTTC--THHHHHHHC-CC
T ss_pred HHHHHHHHHcCCCCC--CCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhccccc--cHHHHHHhccCC
Confidence 999999999999986 3889999999999999999999999999999999999999999999644 466666665554
Q ss_pred CChhHHHHhhhhcCCCCCCCc
Q 045083 370 FKPQEIQELSKNVGRGQYPNG 390 (556)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~p~~ 390 (556)
.+..+..........+..|..
T Consensus 223 ~~l~~~~~~~~r~~~g~t~l~ 243 (261)
T 2xai_A 223 PSLMQLCRLRIRKCFGIQQHH 243 (261)
T ss_dssp CCHHHHHHHHHHTTSCTTCGG
T ss_pred ccHHHHHHHHHHHHhchhccc
Confidence 444444444333344444443
No 22
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=3.1e-37 Score=288.06 Aligned_cols=228 Identities=20% Similarity=0.247 Sum_probs=202.0
Q ss_pred HhhhccCCCcHhHHHHhcCCHHHHHHHHh----cCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhh
Q 045083 124 LKMTNEEQNTPLHEAVRLRSVDVVKILIK----ADPHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEK 199 (556)
Q Consensus 124 l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~----~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~ 199 (556)
++.+|.+|.||||+|+..|+.+++++|++ .+.+++ ..+..|.||||+|+..|+.+++++|++++.+...
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------ 74 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELD-IYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMA------ 74 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCC-cccccCCCHHHHHHHcCCHHHHHHHHHcCCCccc------
Confidence 45689999999999999999999999997 566665 7788999999999999999999999999876533
Q ss_pred cCCCCCcHhHHHHhcCCHHHHHHHHhcCCC---CCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcC-C
Q 045083 200 TNEEQNTPLHEAVRLRRVDVVKILIKADPH---VPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTN-E 275 (556)
Q Consensus 200 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~---~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~-~ 275 (556)
.+..|.||||.|+..|+.+++++|++.++. ..+..+..|.||||+|+..|+.+++++|++.+.+ ++..+ .
T Consensus 75 ~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~ 148 (241)
T 1k1a_A 75 LDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGAD------IDAVDIK 148 (241)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------TTCCCTT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCC------ccccccc
Confidence 688999999999999999999999999872 2467889999999999999999999999999875 45556 7
Q ss_pred CCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcC
Q 045083 276 EQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVYTY 355 (556)
Q Consensus 276 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~~~ 355 (556)
.|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+.+|+.+++++|+++|++++.+|..|+||||+|+..+
T Consensus 149 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~ 227 (241)
T 1k1a_A 149 SGRSPLIHAVENNSLSMVQLLLQHGANVN-AQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRR 227 (241)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcC
Confidence 89999999999999999999999999986 77999999999999999999999999999999999999999999999988
Q ss_pred ChhHHHHHHH
Q 045083 356 PTDILERVLI 365 (556)
Q Consensus 356 ~~~~~~~~~~ 365 (556)
..++++.+..
T Consensus 228 ~~~i~~~l~~ 237 (241)
T 1k1a_A 228 VIDILRGKAT 237 (241)
T ss_dssp HHHHHTC---
T ss_pred cHHHHhhhcc
Confidence 8888765543
No 23
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=5.4e-38 Score=312.04 Aligned_cols=280 Identities=19% Similarity=0.228 Sum_probs=223.1
Q ss_pred HHHHHHHhcCCchHHHHhhhhhcccccccCCCCeeEEeeeccccccccccccccccchHHHHHHHHhhCccccccccCCC
Q 045083 3 RKLYEAAAKGDIEPFREIARDELESIVTDVMKNTVLHVNIMRSHLTLQTEEGEISSESTEFVEQILDLCPSLLFQANAKG 82 (556)
Q Consensus 3 ~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g 82 (556)
++||+||..|+.++|++|+++|++++..|..|.||||+|+..|+. +++++|++ .+. ...+.+|
T Consensus 22 t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~-----------~~v~~Ll~---~g~---~~~~~~g 84 (364)
T 3ljn_A 22 EKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCV-----------DTAKYLAS---VGE---VHSLWHG 84 (364)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCH-----------HHHHHHHH---HCC---CCCCBTT
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCH-----------HHHHHHHH---CCC---CccccCC
Confidence 689999999999999999999999999999999999999999999 99999955 333 2334589
Q ss_pred ChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhH-----HHHHHHhhhccCCCcHhHHHHhcC--CHHHHHHHHhcCC
Q 045083 83 DSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVES-----AARQILKMTNEEQNTPLHEAVRLR--SVDVVKILIKADP 155 (556)
Q Consensus 83 ~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~g~t~Lh~A~~~g--~~~~v~~Ll~~~~ 155 (556)
.||||+|+..|+.+++++|++.+.....+....... ......+..|..|.||||+|+..| +.+++++|++.|.
T Consensus 85 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga 164 (364)
T 3ljn_A 85 QKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGA 164 (364)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCC
Confidence 999999999999999999999844321111000000 000001227889999999999999 9999999999999
Q ss_pred CCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCC
Q 045083 156 HVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSAN 235 (556)
Q Consensus 156 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 235 (556)
+++ ..|..|.||||+|+..|+.+++++|++++++... ..++..+..|.||||+|+..|+.+++++|++++.++ +..|
T Consensus 165 ~~~-~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~-~~~d 241 (364)
T 3ljn_A 165 SPT-AKDKADETPLMRAMEFRNREALDLMMDTVPSKSS-LRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDV-NMED 241 (364)
T ss_dssp CTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSS-CCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCT-TCCC
T ss_pred CCc-ccCCCCCCHHHHHHHcCCHHHHHHHHhccccccc-ccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCCC
Confidence 987 7788999999999999999999999999866210 002237889999999999999999999999999985 7889
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHH------hhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCC
Q 045083 236 RNSETPLYMAVANGSAEIVAEILQNCPESAARQM------LEKTNEEQNTPLHEAVRLRSVDVAKILIEADPH 302 (556)
Q Consensus 236 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~------~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~ 302 (556)
.+|.||||+|+..|+.+++++|++++.+...... ....+..+++|++.|+..|+.+.+..|++.+.+
T Consensus 242 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~~~v~~ll~~~~~ 314 (364)
T 3ljn_A 242 NEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLD 314 (364)
T ss_dssp TTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccCHHHHHHHHHHHHH
Confidence 9999999999999999999999999875432100 001345677788888888877777777766544
No 24
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=2.1e-36 Score=280.55 Aligned_cols=224 Identities=21% Similarity=0.255 Sum_probs=122.3
Q ss_pred CCCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCCcc
Q 045083 80 AKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHVSY 159 (556)
Q Consensus 80 ~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~ 159 (556)
..+.+|||.|+..|+.+.+++|++.+... ++..|..|.||||+|+..|+.+++++|++.+.+++
T Consensus 4 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~---------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~- 67 (231)
T 3aji_A 4 CVSNIMICNLAYSGKLDELKERILADKSL---------------ATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVN- 67 (231)
T ss_dssp CCSSSHHHHHHHHTCHHHHHHHHHHCGGG---------------GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC-
T ss_pred ccccchHHHHHHhCCHHHHHHHHHhchhh---------------hhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCC-
Confidence 34566777777777777777776654321 34456667777777777777777777777666655
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCC
Q 045083 160 SANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSE 239 (556)
Q Consensus 160 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~ 239 (556)
..+..|.||||+|+..|+.+++++|++++.+.. ..+..|.||||.|+..++.+++++|++.+.+. +..+..|.
T Consensus 68 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~ 140 (231)
T 3aji_A 68 DKDDAGWSPLHIAASAGXDEIVKALLVKGAHVN------AVNQNGCTPLHYAASKNRHEIAVMLLEGGANP-DAKDHYDA 140 (231)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSC
T ss_pred CcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCC------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCC
Confidence 455566666666666666666666666554422 14445555555555555555555555555442 34444455
Q ss_pred CHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHH
Q 045083 240 TPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAA 319 (556)
Q Consensus 240 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~ 319 (556)
||||+|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+
T Consensus 141 t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~ 213 (231)
T 3aji_A 141 TAMHRAAAKGNLKMVHILLFYKAS------TNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIY-IENKEEKTPLQVAK 213 (231)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCC------SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHSC
T ss_pred cHHHHHHHcCCHHHHHHHHhcCCC------ccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHH
Confidence 555555555555555555544432 23344444455555555555555555554444443 34444455555544
Q ss_pred HcCCHHHHHHHHhc
Q 045083 320 ANGSVKIVAKILQK 333 (556)
Q Consensus 320 ~~~~~~~v~~Ll~~ 333 (556)
..++.+++++|+++
T Consensus 214 ~~~~~~i~~lL~~~ 227 (231)
T 3aji_A 214 GGLGLILKRLAEGE 227 (231)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHccc
Confidence 44444444444443
No 25
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=3.8e-36 Score=278.78 Aligned_cols=226 Identities=22% Similarity=0.218 Sum_probs=207.6
Q ss_pred ccCCCcHhHHHHhcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcH
Q 045083 128 NEEQNTPLHEAVRLRSVDVVKILIKADPHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTP 207 (556)
Q Consensus 128 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~ 207 (556)
+..+++|||.|++.|+.+.+++|++.++......+..|.||||+|+..|+.+++++|++.+.+.. ..+..|.||
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~------~~~~~g~t~ 76 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVN------DKDDAGWSP 76 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC------CCCTTSCCH
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCC------CcCCCCCCH
Confidence 45689999999999999999999999888766889999999999999999999999999986643 278899999
Q ss_pred hHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhc
Q 045083 208 LHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRL 287 (556)
Q Consensus 208 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~ 287 (556)
||.|+..|+.+++++|++++.+. +..+..|.||||+|+..|+.+++++|++.+.+ ++.++..|.||||+|+..
T Consensus 77 L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~g~t~L~~A~~~ 149 (231)
T 3aji_A 77 LHIAASAGXDEIVKALLVKGAHV-NAVNQNGCTPLHYAASKNRHEIAVMLLEGGAN------PDAKDHYDATAMHRAAAK 149 (231)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHcCHHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCCcCCCCCcHHHHHHHc
Confidence 99999999999999999999985 78899999999999999999999999999874 567788999999999999
Q ss_pred CCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCChhHHHHHHHhh
Q 045083 288 RSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVYTYPTDILERVLIVR 367 (556)
Q Consensus 288 g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~~~~~~ 367 (556)
|+.+++++|+++|++++ .+|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..++.++.+.+...+
T Consensus 150 ~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~ 228 (231)
T 3aji_A 150 GNLKMVHILLFYKASTN-IQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEE 228 (231)
T ss_dssp TCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCcc-ccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcccc
Confidence 99999999999999986 77999999999999999999999999999999999999999999999888877777665443
No 26
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=4.4e-36 Score=277.73 Aligned_cols=214 Identities=21% Similarity=0.251 Sum_probs=194.3
Q ss_pred CCcHhHHHHhcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhh-cCCCCCcHhH
Q 045083 131 QNTPLHEAVRLRSVDVVKILIKADPHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEK-TNEEQNTPLH 209 (556)
Q Consensus 131 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~-~~~~g~t~L~ 209 (556)
|+||||+|+..|+.+++++|++.+++.....+..|.||||+|+..|+.+++++|++.++.... .. .+..|.||||
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~----~~~~~~~g~t~L~ 77 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL----DDYPDDSGWTPFH 77 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCG----GGCCCTTSCCHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccc----cccCCCCCCCHHH
Confidence 789999999999999999999999998777899999999999999999999999999843221 12 6789999999
Q ss_pred HHHhcCCHHHHHHHHhcC--CCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhc
Q 045083 210 EAVRLRRVDVVKILIKAD--PHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRL 287 (556)
Q Consensus 210 ~A~~~~~~~~v~~Ll~~~--~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~ 287 (556)
.|+..|+.+++++|++.+ ++ .+..+..|.||||+|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..
T Consensus 78 ~A~~~~~~~~~~~Ll~~g~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~g~t~L~~A~~~ 150 (228)
T 2dzn_A 78 IACSVGNLEVVKSLYDRPLKPD-LNKITNQGVTCLHLAVGKKWFEVSQFLIENGAS------VRIKDKFNQIPLHRAASV 150 (228)
T ss_dssp HHHHHCCHHHHHHHHSSSSCCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC------SCCCCTTSCCHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHhCCCCcc-cccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCC------ccccCCCCCCHHHHHHHc
Confidence 999999999999999998 66 477899999999999999999999999999874 567889999999999999
Q ss_pred CCHHHHHHHHhcC-CCCCccccCCCCCHHHHHHHcCCHHHHHHHH-hcCCCCCCCCCCCCcHHHHHHhcCC
Q 045083 288 RSVDVAKILIEAD-PHVPYSANRNSETPLYMAAANGSVKIVAKIL-QKCPSPAHEGPDGKTALHAAVYTYP 356 (556)
Q Consensus 288 g~~~~v~~Ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~~~~~~~~d~~g~t~L~~A~~~~~ 356 (556)
|+.+++++|++.| .++ +.+|..|+||||+|+..|+.+++++|+ +.|++++.+|.+|+||+|+|+..+.
T Consensus 151 ~~~~~v~~Ll~~g~~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~~~ 220 (228)
T 2dzn_A 151 GSLKLIELLCGLGKSAV-NWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQV 220 (228)
T ss_dssp TCHHHHHHHHTTTCCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSSTTH
T ss_pred CCHHHHHHHHhcCcccc-cCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHHHH
Confidence 9999999999999 555 478999999999999999999999999 8899999999999999999976533
No 27
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=6.3e-37 Score=293.13 Aligned_cols=256 Identities=21% Similarity=0.236 Sum_probs=187.4
Q ss_pred ccccCCCCeeEEeeeccccccccccccccccchHHHHHHHHhhCccccccccCCCChHHHHHHHhCcHHHHHHHHHHhcc
Q 045083 28 IVTDVMKNTVLHVNIMRSHLTLQTEEGEISSESTEFVEQILDLCPSLLFQANAKGDSPLHLAAKKGHTAIVEFLIVFANR 107 (556)
Q Consensus 28 ~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~ 107 (556)
+..|.+|+||||+|+..|+. +++++|++. ...+..++..+..|.||||+|+..|+.+++++|+++|++
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~-----------~~v~~Ll~~-g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~ 70 (282)
T 1oy3_D 3 GYVTEDGDTALHLAVIHQHE-----------PFLDFLLGF-SAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG 70 (282)
T ss_dssp CCCCTTCCCHHHHHHHTTCH-----------HHHHHHHHH-HTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred CccCCCCCcHHHHHHHcCCH-----------HHHHHHHhc-CCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 45789999999999999999 999999663 333445788999999999999999999999999999987
Q ss_pred CCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCCccc------------ccCCCCcHHHHHHHc
Q 045083 108 QPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHVSYS------------ANRNSETLLYMAVAN 175 (556)
Q Consensus 108 ~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~------------~~~~g~t~L~~A~~~ 175 (556)
++.+|..|.||||+|+..|+.+++++|++.+++.... ....+.++++.++..
T Consensus 71 ----------------~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (282)
T 1oy3_D 71 ----------------VLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQP 134 (282)
T ss_dssp ----------------SSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC--------------------------
T ss_pred ----------------CCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhcccc
Confidence 4567899999999999999999999999988764311 122355666666655
Q ss_pred CCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHH
Q 045083 176 GSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVA 255 (556)
Q Consensus 176 g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~ 255 (556)
+.......++.... ..++..+..|.||||.|+..|+.+++++|++.++++....+..|+||||+|+..|+.++++
T Consensus 135 ~~~~~~~~~~~~~~-----~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~ 209 (282)
T 1oy3_D 135 NPENEEEPRDEDWR-----LQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLE 209 (282)
T ss_dssp ---------CCCGG-----GGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHH
T ss_pred ccchhhhhhhhhhh-----hcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHH
Confidence 54433332222111 1234478899999999999999999999999999964443456999999999999999999
Q ss_pred HHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCC
Q 045083 256 EILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGS 323 (556)
Q Consensus 256 ~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~ 323 (556)
+|++.+.+ ++.+|..|+||||+|+.+|+.+++++|+++|++++ .+|..|.|||++|.....
T Consensus 210 ~Ll~~gad------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 210 LLLKAGAD------PTARMYGGRTPLGSALLRPNPILARLLRAHGAPEP-EDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp HHHHTTCC------TTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCC-CCC---------------
T ss_pred HHHHcCCC------CcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcC-cCCCcccccccccCCccc
Confidence 99999875 57888999999999999999999999999999986 789999999999987654
No 28
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=276.72 Aligned_cols=232 Identities=20% Similarity=0.211 Sum_probs=182.8
Q ss_pred ccccCCCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCC
Q 045083 76 FQANAKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADP 155 (556)
Q Consensus 76 ~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~ 155 (556)
+..|..|.||||.|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++.++
T Consensus 3 ~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~----------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~ 66 (240)
T 3eu9_A 3 THIDDYSTWDIVKATQYGIYERCRELVEAGYD----------------VRQPDKENVTLLHWAAINNRIDLVKYYISKGA 66 (240)
T ss_dssp CCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCC----------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred cccccccchHHHHHHHcCChHHHHHHHHcCCC----------------cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCC
Confidence 45677888899999999999999999888766 45567888899999999999999999998888
Q ss_pred CCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCC
Q 045083 156 HVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSAN 235 (556)
Q Consensus 156 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 235 (556)
+.....+..|.||||+|+..|+.+++++|++.+.+... .+..|.||||.|+..|+.+++++|++.+.+. +..+
T Consensus 67 ~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~-~~~~ 139 (240)
T 3eu9_A 67 IVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSL------IDGEGCSCIHLAAQFGHTSIVAYLIAKGQDV-DMMD 139 (240)
T ss_dssp CTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC
T ss_pred cchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcc------cCCCCCCHHHHHHHcCHHHHHHHHHhcCCCc-cccC
Confidence 88766666788888888888888888888888765432 5777888888888888888888888887774 6777
Q ss_pred CCCCCHHHHHHHcCC-HHHHHHHHHcCChhHHHHHhhhcCC-CCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCC
Q 045083 236 RNSETPLYMAVANGS-AEIVAEILQNCPESAARQMLEKTNE-EQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSET 313 (556)
Q Consensus 236 ~~g~t~L~~A~~~g~-~~~v~~Ll~~~~~~~~~~~~~~~~~-~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t 313 (556)
.+|.||||+|+..++ .+++++|++.+.+ ++..+. .|.||||+|+..|+.+++++|+++|++++ .+|..|+|
T Consensus 140 ~~g~t~l~~a~~~~~~~~~~~~L~~~~~~------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t 212 (240)
T 3eu9_A 140 QNGMTPLMWAAYRTHSVDPTRLLLTFNVS------VNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVD-AQNIKGES 212 (240)
T ss_dssp TTSCCHHHHHHHHCCSSTTHHHHHHTTCC------TTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT-CBCTTSCB
T ss_pred CCCCcHHHHHHHhCChHHHHHHHHhcCCC------cchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCC
Confidence 788888888886655 7778888877764 344454 77888888888888888888888887765 66778888
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCC
Q 045083 314 PLYMAAANGSVKIVAKILQKCPSP 337 (556)
Q Consensus 314 ~L~~A~~~~~~~~v~~Ll~~~~~~ 337 (556)
|||+|+++|+.+++++|++.++..
T Consensus 213 ~l~~A~~~~~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 213 ALDLAKQRKNVWMINHLQEARQAK 236 (240)
T ss_dssp HHHHHHHTTCHHHHHHHHHHC---
T ss_pred HHHHHHHcCcHHHHHHHHHhhhcc
Confidence 888888888888888888776654
No 29
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.9e-37 Score=288.76 Aligned_cols=224 Identities=24% Similarity=0.342 Sum_probs=142.4
Q ss_pred cccCCCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCH-HHHHHHHhcCC
Q 045083 77 QANAKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSV-DVVKILIKADP 155 (556)
Q Consensus 77 ~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~-~~v~~Ll~~~~ 155 (556)
.+|..+.+||+.||..|+.++|++|++.++....+ ....++..+..|.||||.|+..++. .++++|++.|.
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~--------~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Ga 77 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLED--------AEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGL 77 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC------------------------------------------------CCC
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCccccc--------ccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCC
Confidence 45777889999999999999999999987653221 1122456778899999999987765 47888999998
Q ss_pred CCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCC
Q 045083 156 HVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSAN 235 (556)
Q Consensus 156 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 235 (556)
+++ ..|..|.||||+|+..|+.+++++|++.+++... .+..|.||+|.|+..++.+++++|++.+.++ +.+|
T Consensus 78 dvn-~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~------~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-n~~d 149 (269)
T 4b93_B 78 GVN-VTSQDGSSPLHVAALHGRADLIPLLLKHGANAGA------RNADQAVPLHLACQQGHFQVVKCLLDSNAKP-NKKD 149 (269)
T ss_dssp CTT-CCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTC------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCC
T ss_pred CCC-CcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCc------cCCCCCCccccccccChHHHHHHHHHCCCCC-CCCC
Confidence 887 6778888888888888888888888888765432 6777788888888888888888888777774 6667
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHH
Q 045083 236 RNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPL 315 (556)
Q Consensus 236 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L 315 (556)
.+|+||||+|+..|+.+++++|++.+.+ ++.++..|+||||+|+..|+.+++++|+++|++++ .+|..|+|||
T Consensus 150 ~~g~TpL~~A~~~g~~~~v~~Ll~~gad------vn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~-~~d~~G~TpL 222 (269)
T 4b93_B 150 LSGNTPLIYACSGGHHELVALLLQHGAS------INASNNKGNTALHEAVIEKHVFVVELLLLHGASVQ-VLNKRQRTAV 222 (269)
T ss_dssp TTCCCHHHHHHHTTCGGGHHHHHHTTCC------TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSC-CCCTTSCCSG
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHCCCC------CCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCCCCHH
Confidence 7777777777777777777777777653 45666777777777777777777777777777764 5677777777
Q ss_pred HHHHHcCC
Q 045083 316 YMAAANGS 323 (556)
Q Consensus 316 ~~A~~~~~ 323 (556)
|+|+++++
T Consensus 223 ~~A~~~~~ 230 (269)
T 4b93_B 223 DCAEQNSK 230 (269)
T ss_dssp GGSCTTCH
T ss_pred HHHHhCCc
Confidence 77766554
No 30
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.8e-35 Score=272.31 Aligned_cols=220 Identities=19% Similarity=0.228 Sum_probs=194.0
Q ss_pred CChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcC--CCCcc
Q 045083 82 GDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKAD--PHVSY 159 (556)
Q Consensus 82 g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~--~~~~~ 159 (556)
|+||||+|+..|+.+++++|++.+... ....|..|.||||+|+..|+.+++++|++.+ .++..
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~---------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~ 66 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSL---------------LLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDD 66 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGG---------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGG
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccc---------------cccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccc
Confidence 789999999999999999999987652 2347899999999999999999999999999 55554
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHhC--CChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCC
Q 045083 160 SANRNSETLLYMAVANGSAEIVAEILQNC--PQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRN 237 (556)
Q Consensus 160 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~--~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 237 (556)
..+..|.||||+|+..|+.+++++|++++ .+. +..+..|.||||.|+..|+.+++++|++++.+. +.+|.+
T Consensus 67 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~ 139 (228)
T 2dzn_A 67 YPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDL------NKITNQGVTCLHLAVGKKWFEVSQFLIENGASV-RIKDKF 139 (228)
T ss_dssp CCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCT------TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTT
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccc------ccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCc-cccCCC
Confidence 47889999999999999999999999987 432 237889999999999999999999999999885 788999
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHH-hcCCCCCccccCCCCCHHH
Q 045083 238 SETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILI-EADPHVPYSANRNSETPLY 316 (556)
Q Consensus 238 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll-~~~~~~~~~~~~~g~t~L~ 316 (556)
|.||||+|+..|+.+++++|++.+.. .++.+|..|+||||+|+..|+.+++++|+ +.|++++ .+|..|+||||
T Consensus 140 g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~-~~~~~g~t~l~ 213 (228)
T 2dzn_A 140 NQIPLHRAASVGSLKLIELLCGLGKS-----AVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYD-LVDNKGAKAED 213 (228)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTTTCC-----CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSC-CBCTTSCBGGG
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcCcc-----cccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCC-ccCCCCCcHHH
Confidence 99999999999999999999999832 35678899999999999999999999999 8899976 78999999999
Q ss_pred HHHHcCCHHHHHHHHh
Q 045083 317 MAAANGSVKIVAKILQ 332 (556)
Q Consensus 317 ~A~~~~~~~~v~~Ll~ 332 (556)
+|+..+ ++++|++
T Consensus 214 ~A~~~~---~~~~l~~ 226 (228)
T 2dzn_A 214 VALNEQ---VKKFFLN 226 (228)
T ss_dssp GCSSTT---HHHHHHT
T ss_pred HHHHHH---HHHHHHh
Confidence 997654 4555443
No 31
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.7e-34 Score=269.15 Aligned_cols=230 Identities=18% Similarity=0.213 Sum_probs=208.7
Q ss_pred hhccCCCcHhHHHHhcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCC
Q 045083 126 MTNEEQNTPLHEAVRLRSVDVVKILIKADPHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQN 205 (556)
Q Consensus 126 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~ 205 (556)
..|..|.||||.|+..|+.+++++|++.+.++. ..+..|.||||+|+..|+.+++++|+++++..... .+..|.
T Consensus 4 ~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~-----~~~~~~ 77 (240)
T 3eu9_A 4 HIDDYSTWDIVKATQYGIYERCRELVEAGYDVR-QPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQL-----GGDLNS 77 (240)
T ss_dssp CCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-----BTTTTB
T ss_pred ccccccchHHHHHHHcCChHHHHHHHHcCCCcC-CCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhh-----cCCcCC
Confidence 457889999999999999999999999999987 77889999999999999999999999998765432 456699
Q ss_pred cHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHH
Q 045083 206 TPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAV 285 (556)
Q Consensus 206 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~ 285 (556)
||||.|+..|+.+++++|++.+.+. +..+..|.||||+|+..|+.+++++|++.+.+ ++.++..|.||||+|+
T Consensus 78 t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~------~~~~~~~g~t~l~~a~ 150 (240)
T 3eu9_A 78 TPLHWATRQGHLSMVVQLMKYGADP-SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQD------VDMMDQNGMTPLMWAA 150 (240)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHH
T ss_pred ChhHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCHHHHHHHHHhcCCC------ccccCCCCCcHHHHHH
Confidence 9999999999999999999999885 77899999999999999999999999999874 5678899999999999
Q ss_pred hcCC-HHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCChhHHHHHH
Q 045083 286 RLRS-VDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVYTYPTDILERVL 364 (556)
Q Consensus 286 ~~g~-~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~~~ 364 (556)
..++ .+++++|++.|++++...+..|.||||+|+.+|+.+++++|+++|++++.+|..|+||||+|+..++.++++.++
T Consensus 151 ~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~ 230 (240)
T 3eu9_A 151 YRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQ 230 (240)
T ss_dssp HHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred HhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 7766 899999999999987443348999999999999999999999999999999999999999999999999999887
Q ss_pred HhhC
Q 045083 365 IVRG 368 (556)
Q Consensus 365 ~~~~ 368 (556)
....
T Consensus 231 ~~~~ 234 (240)
T 3eu9_A 231 EARQ 234 (240)
T ss_dssp HHC-
T ss_pred Hhhh
Confidence 6654
No 32
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=2.7e-35 Score=284.38 Aligned_cols=250 Identities=20% Similarity=0.197 Sum_probs=210.6
Q ss_pred HHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCCcccccCCCCc
Q 045083 88 LAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHVSYSANRNSET 167 (556)
Q Consensus 88 ~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t 167 (556)
.++..++.+.++.++.............. ....+..|.||||.|+..|+.+++++|++.|++++ ..+..|.|
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t 75 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRK-------KTKVKFDDGAVFLAACSSGDTEEVLRLLERGADIN-YANVDGLT 75 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCS-------CCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTT-CBCTTCCB
T ss_pred hHHHHHHHHHHHHHHccccccccccccCc-------ccccccCCccHHHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCC
Confidence 46777888888888876554322111110 12234578899999999999999999999999987 67889999
Q ss_pred HHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHH
Q 045083 168 LLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVA 247 (556)
Q Consensus 168 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 247 (556)
|||+|+..|+.+++++|++++.+.. ..+..|.||||.|+..|+.+++++|++++++. +..+.+|.||||+|+.
T Consensus 76 ~L~~A~~~g~~~~v~~Ll~~ga~~~------~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~ 148 (299)
T 1s70_B 76 ALHQACIDDNVDMVKFLVENGANIN------QPDNEGWIPLHAAASCGYLDIAEYLISQGAHV-GAVNSEGDTPLDIAEE 148 (299)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTT------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCCS
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCC------CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHh
Confidence 9999999999999999999987643 37889999999999999999999999999985 7889999999999999
Q ss_pred cCCHHHHHHHHHcCChhHHH--------------HHh-------hhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCcc
Q 045083 248 NGSAEIVAEILQNCPESAAR--------------QML-------EKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYS 306 (556)
Q Consensus 248 ~g~~~~v~~Ll~~~~~~~~~--------------~~~-------~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~ 306 (556)
.++.++++.++......... .++ ...+..|.||||+|+..|+.+++++|++.|++++ .
T Consensus 149 ~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~-~ 227 (299)
T 1s70_B 149 EAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVN-I 227 (299)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT-C
T ss_pred cchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCC-C
Confidence 99999999888653321110 000 1245679999999999999999999999999986 7
Q ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHh
Q 045083 307 ANRNSETPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVY 353 (556)
Q Consensus 307 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~ 353 (556)
+|..|+||||+|+.+|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 228 ~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~ 274 (299)
T 1s70_B 228 KDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE 274 (299)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS
T ss_pred cCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 89999999999999999999999999999999999999999999965
No 33
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=280.18 Aligned_cols=217 Identities=20% Similarity=0.215 Sum_probs=171.5
Q ss_pred hhccCCCcHhHHHHhcCCHHHHHHHHhcCCCC-------cccccCCCCcHHHHHHHcCCH-HHHHHHHHhCCChhHHHHh
Q 045083 126 MTNEEQNTPLHEAVRLRSVDVVKILIKADPHV-------SYSANRNSETLLYMAVANGSA-EIVAEILQNCPQSAARQML 197 (556)
Q Consensus 126 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~-------~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~~~~~~~~~~~ 197 (556)
.+|..+.+||+.|+..|+.++|++|++.+.+. ....+..+.+||+.|+..+.. .+++.|++.+.+..
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn----- 80 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVN----- 80 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTT-----
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCC-----
Confidence 46777889999999999999999999987653 224566789999999988775 48899999887643
Q ss_pred hhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCC
Q 045083 198 EKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQ 277 (556)
Q Consensus 198 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g 277 (556)
..+.+|.||||+|+..|+.+++++|++.+++. +..+.+|.||+|+|+..++.++++.|++.+.+ ++.+|..|
T Consensus 81 -~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~-~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~------~n~~d~~g 152 (269)
T 4b93_B 81 -VTSQDGSSPLHVAALHGRADLIPLLLKHGANA-GARNADQAVPLHLACQQGHFQVVKCLLDSNAK------PNKKDLSG 152 (269)
T ss_dssp -CCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC------SCCCCTTC
T ss_pred -CcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCc-CccCCCCCCccccccccChHHHHHHHHHCCCC------CCCCCCCC
Confidence 37899999999999999999999999999985 78899999999999999999999999999874 57888999
Q ss_pred CchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCC
Q 045083 278 NTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVYTYP 356 (556)
Q Consensus 278 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~~~~ 356 (556)
+||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+.+|+.+++++|+++|++++.+|.+|+||||+|+..+.
T Consensus 153 ~TpL~~A~~~g~~~~v~~Ll~~gadvn-~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 153 NTPLIYACSGGHHELVALLLQHGASIN-ASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp CCHHHHHHHTTCGGGHHHHHHTTCCTT-CBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCH
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCCC-ccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCc
Confidence 999999999999999999999999986 789999999999999999999999999999999999999999999987553
No 34
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=4.4e-35 Score=280.04 Aligned_cols=228 Identities=20% Similarity=0.236 Sum_probs=201.0
Q ss_pred ccccccCCCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhc
Q 045083 74 LLFQANAKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKA 153 (556)
Q Consensus 74 ~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~ 153 (556)
.++.+|.+|.||||+|+..|+.++|++|+++|++. +.. +|.||||+|+..|+.+++++|+++
T Consensus 23 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~----------------~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ 84 (285)
T 3kea_A 23 DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALK----------------NLL--ENEFPLHQAATLEDTKIVKILLFS 84 (285)
T ss_dssp TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGG----------------SCC--TTCCHHHHHTTSSSCHHHHHHHHT
T ss_pred CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC----------------CCC--CCCCHHHHHHHcCCHHHHHHHHHC
Confidence 46889999999999999999999999999998763 233 599999999999999999999999
Q ss_pred CCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCC-CcHhHHHHhcCCHHHHHHHHhcCCCCCc
Q 045083 154 DPHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQ-NTPLHEAVRLRRVDVVKILIKADPHVPY 232 (556)
Q Consensus 154 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g-~t~L~~A~~~~~~~~v~~Ll~~~~~~~~ 232 (556)
|++++ ..+..|.||||+|+..|+.+++++|++++.+.. ..+..| .||||.|+..|+.+++++|++++++...
T Consensus 85 ga~~~-~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~------~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 157 (285)
T 3kea_A 85 GLDDS-QFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLM------FYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFD 157 (285)
T ss_dssp TCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGG------GCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCC
T ss_pred CCCCC-CcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCC------ccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcccc
Confidence 99987 678899999999999999999999999987643 378888 8999999999999999999999987521
Q ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCch-hHHHHhcCCHHHHHHHHhcCCCCCccccCCC
Q 045083 233 SANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTP-LHEAVRLRSVDVAKILIEADPHVPYSANRNS 311 (556)
Q Consensus 233 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~-Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g 311 (556)
...|.||||+|+..|+.+++++|++++.+ ++.+|..|+|| ||+|+..|+.+++++|+++|++++ ..|
T Consensus 158 --~~~g~t~L~~A~~~g~~~~v~~Ll~~gad------~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~-~~~--- 225 (285)
T 3kea_A 158 --LAILLSCIHITIKNGHVDMMILLLDYMTS------TNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIY-SAN--- 225 (285)
T ss_dssp --CSTHHHHHHHHHHTTCHHHHHHHHHHHHH------TCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCST-TTT---
T ss_pred --ccCCccHHHHHHHcChHHHHHHHHHcCCC------CCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCC-CCC---
Confidence 23899999999999999999999998753 67888999998 999999999999999999999976 444
Q ss_pred CCHHHHHHHcCCHHHHHHHHhcCCCCCCCCC
Q 045083 312 ETPLYMAAANGSVKIVAKILQKCPSPAHEGP 342 (556)
Q Consensus 312 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~ 342 (556)
+.|+..|+.+++++|+++|.+++..+.
T Consensus 226 ----~~a~~~~~~~iv~~Ll~~g~~~~~~~~ 252 (285)
T 3kea_A 226 ----LENVLLDDAEIAKMIIEKHVEYKSDSY 252 (285)
T ss_dssp ----GGGGTTTCHHHHHHHHHHHHHHTTCTT
T ss_pred ----hhhhhcCCHHHHHHHHHcCCCCCCccc
Confidence 366789999999999999987665443
No 35
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.3e-34 Score=266.90 Aligned_cols=216 Identities=19% Similarity=0.261 Sum_probs=191.5
Q ss_pred cCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHH
Q 045083 141 LRSVDVVKILIKADPHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVV 220 (556)
Q Consensus 141 ~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v 220 (556)
+|+.+++++|+++++++....|..|.||||+|+..|+.+++++|++++.+... .+..|.||||.|+..|+.+++
T Consensus 1 gg~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v 74 (223)
T 2f8y_A 1 GDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANI------QDNMGRTPLHAAVSADAQGVF 74 (223)
T ss_dssp ----CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHH
T ss_pred CCcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCC------cCCCCCCHHHHHHHcCCHHHH
Confidence 36788889999999998877788999999999999999999999998866432 788999999999999999999
Q ss_pred HHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcC
Q 045083 221 KILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEAD 300 (556)
Q Consensus 221 ~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~ 300 (556)
++|++.++...+..+..|.||||+|+..|+.+++++|++.+.+ ++..|..|+||||+|+..|+.+++++|+++|
T Consensus 75 ~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 148 (223)
T 2f8y_A 75 QILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHAD------VNAVDDLGKSALHWAAAVNNVDAAVVLLKNG 148 (223)
T ss_dssp HHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC------TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCC------CcCcCCCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 9999998866688899999999999999999999999998874 5677889999999999999999999999999
Q ss_pred CCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCChhHHHHHHHhhCC
Q 045083 301 PHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVYTYPTDILERVLIVRGT 369 (556)
Q Consensus 301 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~~~~~~~~ 369 (556)
++++ .+|..|+||||+|+++|+.+++++|+++|++++.+|..|+||+|+|+..++.++++.++..+..
T Consensus 149 ~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 149 ANKD-MQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLV 216 (223)
T ss_dssp CCTT-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCS
T ss_pred CCCC-CcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCC
Confidence 9876 7788999999999999999999999999999999999999999999999999999888766543
No 36
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=3.2e-36 Score=290.89 Aligned_cols=276 Identities=18% Similarity=0.212 Sum_probs=224.5
Q ss_pred HHHhcCCchHHHHhhhhhccccc---------ccCCCCeeEEeeeccccccccccccccccchHHHHHHHHhhCcccccc
Q 045083 7 EAAAKGDIEPFREIARDELESIV---------TDVMKNTVLHVNIMRSHLTLQTEEGEISSESTEFVEQILDLCPSLLFQ 77 (556)
Q Consensus 7 ~A~~~g~~~~v~~Ll~~g~~~~~---------~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 77 (556)
.+++.+..+.++.++..+.+... .+..|.||||.|+..|+. +++++|++. +..++.
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~-----------~~v~~Ll~~----g~~~~~ 68 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDT-----------EEVLRLLER----GADINY 68 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCH-----------HHHHHHHHH----CCCTTC
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCH-----------HHHHHHHHc----CCCCcc
Confidence 46788888888888887543321 234678999999999999 999999553 456788
Q ss_pred ccCCCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCC
Q 045083 78 ANAKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHV 157 (556)
Q Consensus 78 ~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~ 157 (556)
.|..|.||||+|+..|+.+++++|+++|++ ++..|..|.||||+|+..|+.+++++|+++|+++
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~----------------~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 132 (299)
T 1s70_B 69 ANVDGLTALHQACIDDNVDMVKFLVENGAN----------------INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHV 132 (299)
T ss_dssp BCTTCCBHHHHHHHTTCHHHHHHHHHTTCC----------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----------------CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC
Confidence 899999999999999999999999999887 4567889999999999999999999999999998
Q ss_pred cccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCC
Q 045083 158 SYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRN 237 (556)
Q Consensus 158 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 237 (556)
. ..+..|.||||+|+..|+.+++++++......... .+..+.++++ ..+..++..+.......+..
T Consensus 133 ~-~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~-----~~~~~~~~~~--------~~~~~~l~~~~~~~~~~~~~ 198 (299)
T 1s70_B 133 G-AVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEA-----ARKEEERIML--------RDARQWLNSGHINDVRHAKS 198 (299)
T ss_dssp T-CCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHH-----HHHHHHHHHH--------HHHHHHHHHTCCCCCCCTTT
T ss_pred C-CcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchh-----hhhhhhhHHH--------HHHHHHHhccCcchhhhcCC
Confidence 7 77889999999999999999999988765433221 1111222222 33455666666666677889
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHH
Q 045083 238 SETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYM 317 (556)
Q Consensus 238 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~ 317 (556)
|.||||+|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|+||||+
T Consensus 199 g~t~L~~A~~~g~~~~v~~Ll~~g~d------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~-~~d~~g~t~l~~ 271 (299)
T 1s70_B 199 GGTALHVAAAKGYTEVLKLLIQARYD------VNIKDYDGWTPLHAAAHWGKEEACRILVENLCDME-AVNKVGQTAFDV 271 (299)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTTCC------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCTTTS
T ss_pred CCCHHHHHHHCCcHHHHHHHHHcCCC------CCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHH
Confidence 99999999999999999999999874 57888999999999999999999999999999986 789999999999
Q ss_pred HHHcCCHHHHHHHHhcCC
Q 045083 318 AAANGSVKIVAKILQKCP 335 (556)
Q Consensus 318 A~~~~~~~~v~~Ll~~~~ 335 (556)
|++.. .+.++.++++..
T Consensus 272 A~~~~-~~~l~~l~~~~~ 288 (299)
T 1s70_B 272 ADEDI-LGYLEELQKKQN 288 (299)
T ss_dssp CCSGG-GHHHHHHHHHTT
T ss_pred HHHHH-HHHHHHHHHHHh
Confidence 97644 455555565543
No 37
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=7.4e-36 Score=285.40 Aligned_cols=241 Identities=19% Similarity=0.214 Sum_probs=209.6
Q ss_pred HHhcCCchHHHHhhhhhcccccccCCCCeeEEeeeccccccccccccccccchHHHHHHHHhhCccccccccCCCChHHH
Q 045083 8 AAAKGDIEPFREIARDELESIVTDVMKNTVLHVNIMRSHLTLQTEEGEISSESTEFVEQILDLCPSLLFQANAKGDSPLH 87 (556)
Q Consensus 8 A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpLh 87 (556)
+++..+.+.++.++..+ +++..|.+|.||||+|+..|+. +++++|++ . +..++.. +|.||||
T Consensus 6 ~i~~~~~~~v~~lL~~~-~~~~~d~~g~t~L~~A~~~g~~-----------~~v~~Ll~---~-g~~~~~~--~g~t~L~ 67 (285)
T 3kea_A 6 RINTWKSKQLKSFLSSK-DTFKADVHGHSASYYAIADNNV-----------RLVCTLLN---A-GALKNLL--ENEFPLH 67 (285)
T ss_dssp TGGGCCHHHHHHHHHST-TTTCCCTTSCCHHHHHHHTTCH-----------HHHHHHHH---T-TGGGSCC--TTCCHHH
T ss_pred HHHhcCHHHHHHHHHhC-CCCccCCCCCCHHHHHHHcCCH-----------HHHHHHHh---C-CCCCCCC--CCCCHHH
Confidence 35667777777777765 5788999999999999999999 99999955 4 4445554 5999999
Q ss_pred HHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCCcccccCCC-C
Q 045083 88 LAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHVSYSANRNS-E 166 (556)
Q Consensus 88 ~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-~ 166 (556)
+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++++ ..+..| .
T Consensus 68 ~A~~~g~~~~v~~Ll~~ga~----------------~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g~~ 130 (285)
T 3kea_A 68 QAATLEDTKIVKILLFSGLD----------------DSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLM-FYGKTGWK 130 (285)
T ss_dssp HHTTSSSCHHHHHHHHTTCC----------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGG-GCSSSGGG
T ss_pred HHHHcCCHHHHHHHHHCCCC----------------CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCC-ccCCCCCC
Confidence 99999999999999999987 45678999999999999999999999999999987 677778 8
Q ss_pred cHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCH-HHHH
Q 045083 167 TLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETP-LYMA 245 (556)
Q Consensus 167 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~-L~~A 245 (556)
||||+|+..|+.+++++|+++++... ....|.||||.|+..|+.+++++|+++++++ +.+|..|+|| ||+|
T Consensus 131 t~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~-n~~~~~g~t~~L~~A 202 (285)
T 3kea_A 131 TSFYHAVMLNDVSIVSYFLSEIPSTF-------DLAILLSCIHITIKNGHVDMMILLLDYMTST-NTNNSLLFIPDIKLA 202 (285)
T ss_dssp SHHHHHHHTTCHHHHHHHHTTSCTTC-------CCSTHHHHHHHHHHTTCHHHHHHHHHHHHHT-CTTCCCBCCTTHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCccc-------cccCCccHHHHHHHcChHHHHHHHHHcCCCC-CcccCCCCChHHHHH
Confidence 99999999999999999999987642 2238999999999999999999999999885 7889999998 9999
Q ss_pred HHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCC
Q 045083 246 VANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVP 304 (556)
Q Consensus 246 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~ 304 (556)
+..|+.+++++|++++.+ ++..| +.|+..|+.+++++|+++|.+..
T Consensus 203 ~~~~~~~~v~~Ll~~gad------~~~~~-------~~a~~~~~~~iv~~Ll~~g~~~~ 248 (285)
T 3kea_A 203 IDNKDIEMLQALFKYDIN------IYSAN-------LENVLLDDAEIAKMIIEKHVEYK 248 (285)
T ss_dssp HHHTCHHHHHHHTTSCBC------STTTT-------GGGGTTTCHHHHHHHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHcCCC------CCCCC-------hhhhhcCCHHHHHHHHHcCCCCC
Confidence 999999999999999975 23333 36788999999999999998764
No 38
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=8.1e-34 Score=261.50 Aligned_cols=212 Identities=20% Similarity=0.233 Sum_probs=115.7
Q ss_pred chHHHHHHHHhhCccccccccCCCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHH
Q 045083 59 ESTEFVEQILDLCPSLLFQANAKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEA 138 (556)
Q Consensus 59 ~~~~~l~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A 138 (556)
+++++| ++.+.......|..|.||||+|+..|+.+++++|++++.+ ++..|..|.||||+|
T Consensus 5 ~~i~~L---l~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~----------------~~~~~~~g~t~L~~A 65 (223)
T 2f8y_A 5 AVISDF---IYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD----------------ANIQDNMGRTPLHAA 65 (223)
T ss_dssp CCEETT---EETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC----------------TTCCCTTSCCHHHHH
T ss_pred HHHHHH---HHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCC----------------CCCcCCCCCCHHHHH
Confidence 555555 4444443344456666666666666666666666665554 234455566666666
Q ss_pred HhcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHH
Q 045083 139 VRLRSVDVVKILIKADPHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVD 218 (556)
Q Consensus 139 ~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 218 (556)
+..|+.+++++|++.++......+..|.||||+|+..|+.+++++|+++
T Consensus 66 ~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~------------------------------- 114 (223)
T 2f8y_A 66 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINS------------------------------- 114 (223)
T ss_dssp HHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-------------------------------
T ss_pred HHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHc-------------------------------
Confidence 6666666666666655533224444555555555555555555555554
Q ss_pred HHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHh
Q 045083 219 VVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIE 298 (556)
Q Consensus 219 ~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~ 298 (556)
+.+. +..|.+|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|++
T Consensus 115 --------g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 179 (223)
T 2f8y_A 115 --------HADV-NAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN------KDMQNNREETPLFLAAREGSYETAKVLLD 179 (223)
T ss_dssp --------TCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred --------CCCC-cCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCC------CCCcCCCCcCHHHHHHHcCCHHHHHHHHH
Confidence 4442 34445555555555555555555555555442 33445555555555555555555555555
Q ss_pred cCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q 045083 299 ADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPS 336 (556)
Q Consensus 299 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~ 336 (556)
+|++.+ .+|..|.||||+|+++++.+++++|+++|+.
T Consensus 180 ~ga~~~-~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 180 HFANRD-ITDHMDRLPRDIAQERMHHDIVRLLDEYNLV 216 (223)
T ss_dssp TTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCS
T ss_pred cCCCCc-cccccCCCHHHHHHHhcchHHHHHHHHcCCC
Confidence 555543 4455556666666666666666665555543
No 39
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=3.7e-35 Score=286.25 Aligned_cols=273 Identities=13% Similarity=0.063 Sum_probs=201.8
Q ss_pred chHHHHHHHHhhCccccccccCCCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHH-HHHHhhhccCCCcHhHH
Q 045083 59 ESTEFVEQILDLCPSLLFQANAKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAA-RQILKMTNEEQNTPLHE 137 (556)
Q Consensus 59 ~~~~~l~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~-~~~l~~~~~~g~t~Lh~ 137 (556)
++++++ ++. +..++..+..|.|+++ |+.++|+.|+++|.+............. ..--........+.+|.
T Consensus 33 dlv~~l---l~~-ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 103 (327)
T 1sw6_A 33 DLTSDF---LSS-PLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHV 103 (327)
T ss_dssp TCCCST---TTS-SCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------
T ss_pred chHHHH---hhC-CcccccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHH
Confidence 677777 333 6778889999999988 9999999999999774321000000000 00000011122344688
Q ss_pred HHhcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCC-
Q 045083 138 AVRLRSVDVVKILIKADPHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRR- 216 (556)
Q Consensus 138 A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~- 216 (556)
|+..+..+++++|++.+.+++...|..|.||||+|+..|+.+++++|++++++.. ..+..|.||||+|+..|+
T Consensus 104 a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n------~~d~~g~TpLh~A~~~g~~ 177 (327)
T 1sw6_A 104 SFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRL------YGDNMGESCLVKAVKSVNN 177 (327)
T ss_dssp CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT------BCCTTCCCHHHHHHHSSHH
T ss_pred HHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC------CcCCCCCCHHHHHHHhccc
Confidence 8988999999999999999985489999999999999999999999999997754 378999999999999998
Q ss_pred --HHHHHHHHhcCCCCCccCCCCCCCHHHHHHH----cCCHHHHHHHHHcCChhHH--------------HHHhhhcCCC
Q 045083 217 --VDVVKILIKADPHVPYSANRNSETPLYMAVA----NGSAEIVAEILQNCPESAA--------------RQMLEKTNEE 276 (556)
Q Consensus 217 --~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~----~g~~~~v~~Ll~~~~~~~~--------------~~~~~~~~~~ 276 (556)
.++++.|++.+....+.+|.+|+||||+|+. .|+.++++.|++.+..... ...++.++..
T Consensus 178 ~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~ 257 (327)
T 1sw6_A 178 YDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGE 257 (327)
T ss_dssp HHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC--------------
T ss_pred ccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCccccccc
Confidence 6778888877644467899999999999999 8999999999987421100 1135677899
Q ss_pred CCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcC
Q 045083 277 QNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVYTY 355 (556)
Q Consensus 277 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~~~ 355 (556)
|.||||.|+. +++|++++. +.+|..|+||||+|+++|+.+++++|+++|++++.+|..|+||||+|++.|
T Consensus 258 g~t~L~~a~~------~~~Ll~~~~---n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 258 RKDSILENLD------LKWIIANML---NAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp --CHHHHHCS------HHHHHHHTT---TCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred CCChhHHHHH------HHHHHHhCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 9999999996 999999853 367899999999999999999999999999999999999999999998653
No 40
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=7.9e-35 Score=283.94 Aligned_cols=258 Identities=16% Similarity=0.166 Sum_probs=200.6
Q ss_pred hcCCchHHHHhhhhhcccccccCCCCeeEEeeeccccccccccccccccchHHHHHHHHhhCccc--c-c----------
Q 045083 10 AKGDIEPFREIARDELESIVTDVMKNTVLHVNIMRSHLTLQTEEGEISSESTEFVEQILDLCPSL--L-F---------- 76 (556)
Q Consensus 10 ~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~-~---------- 76 (556)
.....+++++|+++|++++..|..|.++++ |+. ++++.|++.-.. +.. + .
T Consensus 28 ~~~~~dlv~~ll~~ga~i~~~~~~g~~~~~-----g~~-----------~~v~~Ll~~g~~-~~~~~~~~a~~~~~~~~~ 90 (327)
T 1sw6_A 28 ITFTHDLTSDFLSSPLKIMKALPSPVVNDN-----EQK-----------MKLEAFLQRLLF-PEIQEMPTSLNNDSSNRN 90 (327)
T ss_dssp EECCTTCCCSTTTSSCCCEECBCCCCCCCH-----HHH-----------HHHHHHHHHHHC-------------------
T ss_pred hhhcCchHHHHhhCCcccccCCCCCCcccC-----chh-----------HHHHHHHHhccC-CccccchHhhhccccccc
Confidence 345667899999999999999999999977 999 999999764211 111 0 0
Q ss_pred -cccCCCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhh-hccCCCcHhHHHHhcCCHHHHHHHHhcC
Q 045083 77 -QANAKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKM-TNEEQNTPLHEAVRLRSVDVVKILIKAD 154 (556)
Q Consensus 77 -~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~-~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~ 154 (556)
.......+.+|+|+..+..++++.|++.+.+ ++. +|..|.||||+|+..|+.+++++|+++|
T Consensus 91 ~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~d----------------vn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~G 154 (327)
T 1sw6_A 91 SEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLN----------------LNIPVDEHGNTPLHWLTSIANLELVKHLVKHG 154 (327)
T ss_dssp -------------CHHHHHHHHHHHCTTSCCC----------------SCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred ccccCCccchhHHHHHhhHHHHHHHHHhcCCC----------------cccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 0111222345888888889999999988877 456 7899999999999999999999999999
Q ss_pred CCCcccccCCCCcHHHHHHHcCC---HHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHh----cCCHHHHHHHHhc-
Q 045083 155 PHVSYSANRNSETLLYMAVANGS---AEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVR----LRRVDVVKILIKA- 226 (556)
Q Consensus 155 ~~~~~~~~~~g~t~L~~A~~~g~---~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~- 226 (556)
++++ ..|..|.||||+|+..|+ .++++.|++.+... ++..+..|.||||+|+. .|+.+++++|++.
T Consensus 155 ad~n-~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~-----~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~ 228 (327)
T 1sw6_A 155 SNRL-YGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPC-----LILEDSMNRTILHHIIITSGMTGCSAAAKYYLDIL 228 (327)
T ss_dssp CCTT-BCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGG-----GGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHH
T ss_pred CCCC-CcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhcc-----ccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHH
Confidence 9998 889999999999999998 67788888776332 34489999999999999 8999999999987
Q ss_pred -------------------CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhc
Q 045083 227 -------------------DPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRL 287 (556)
Q Consensus 227 -------------------~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~ 287 (556)
+.+ ++..+..|.||||.|+. +++|++.+ ++.+|..|+||||+|+..
T Consensus 229 ~~~~~~~~~~~i~~~~~~~g~~-~~~~~~~g~t~L~~a~~------~~~Ll~~~--------~n~~d~~G~TpLh~A~~~ 293 (327)
T 1sw6_A 229 MGWIVKKQNRPIQSGTNEKESK-PNDKNGERKDSILENLD------LKWIIANM--------LNAQDSNGDTCLNIAARL 293 (327)
T ss_dssp HHHHHHGGGCCEEEC-----------------CHHHHHCS------HHHHHHHT--------TTCCCTTSCCHHHHHHHH
T ss_pred HHHHhcccchHHHhhhhcccCC-cccccccCCChhHHHHH------HHHHHHhC--------CCCCCCCCCCHHHHHHHc
Confidence 555 47789999999999995 88888874 468889999999999999
Q ss_pred CCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcC
Q 045083 288 RSVDVAKILIEADPHVPYSANRNSETPLYMAAANG 322 (556)
Q Consensus 288 g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~ 322 (556)
|+.+++++|+++|++++ .+|..|+||||+|+++|
T Consensus 294 g~~~~v~~Ll~~Gad~~-~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 294 GNISIVDALLDYGADPF-IANKSGLRPVDFGAGLE 327 (327)
T ss_dssp CCHHHHHHHHHTTCCTT-CCCTTSCCGGGGTCC--
T ss_pred CCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHhcC
Confidence 99999999999999986 88999999999998765
No 41
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=2e-34 Score=268.02 Aligned_cols=222 Identities=22% Similarity=0.246 Sum_probs=138.9
Q ss_pred cccCCCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCC
Q 045083 77 QANAKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPH 156 (556)
Q Consensus 77 ~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~ 156 (556)
..|.+|.||||+|+..|+.+++++|++.+.....+ ++..|..|.||||+|+..|+.+++++|+++|.+
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 70 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAF------------LNFQNNLQQTPLHLAVITNQPEIAEALLGAGCD 70 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CCC------------CCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCC
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHH------------hhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 46778888888888888888888888766532111 455677888888888888888888888888877
Q ss_pred CcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCC
Q 045083 157 VSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANR 236 (556)
Q Consensus 157 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 236 (556)
++ ..+..|.||||+|+..|+.+++++|++.+...... ......+.
T Consensus 71 ~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~----------------------------------~~~~~~~~ 115 (236)
T 1ikn_D 71 PE-LRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLH----------------------------------SILKATNY 115 (236)
T ss_dssp SC-CCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSS----------------------------------CGGGCCCT
T ss_pred CC-CcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHH----------------------------------HHhhccCC
Confidence 76 56777888888888888888888888776432110 11233444
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCC-CCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHH
Q 045083 237 NSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNE-EQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPL 315 (556)
Q Consensus 237 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~-~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L 315 (556)
.|.||||+|+..|+.+++++|++.+.+ ++.++. .|+||||+|+..|+.+++++|+++|++++ .+|..|+|||
T Consensus 116 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~tpl 188 (236)
T 1ikn_D 116 NGHTCLHLASIHGYLGIVELLVSLGAD------VNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVN-RVTYQGYSPY 188 (236)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHHTCC------TTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSC-CCCTTCCCGG
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cccCCCCCHH
Confidence 555555555555555555555555543 334444 56666666666666666666666666654 4566666666
Q ss_pred HHHHHcCCHHHHHHHHhcCCCC--CCCCCCCCcHHHHHH
Q 045083 316 YMAAANGSVKIVAKILQKCPSP--AHEGPDGKTALHAAV 352 (556)
Q Consensus 316 ~~A~~~~~~~~v~~Ll~~~~~~--~~~d~~g~t~L~~A~ 352 (556)
|+|+.+|+.+++++|+++|++. ...+.+|.||.+.+.
T Consensus 189 ~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~ 227 (236)
T 1ikn_D 189 QLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTES 227 (236)
T ss_dssp GGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC-
T ss_pred HHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhc
Confidence 6666666666666666666653 355666666655443
No 42
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=3.7e-32 Score=251.98 Aligned_cols=198 Identities=23% Similarity=0.283 Sum_probs=140.1
Q ss_pred CCCcHhHHHHhcCCHHHHHHHHhc-CCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHh
Q 045083 130 EQNTPLHEAVRLRSVDVVKILIKA-DPHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPL 208 (556)
Q Consensus 130 ~g~t~Lh~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L 208 (556)
.|+||||+|++.|+.+++++|++. +.+++ ..|..|.||||+|+..|+.+++++|++.+++.... ..+..+..|.|||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~~~~~g~t~L 79 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVH-QRGAMGETALHIAALYDNLEAAMVLMEAAPELVFE-PMTSELYEGQTAL 79 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGC-CCCSTTTTTCCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcc-cCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccc-cccccCCCCcCHH
Confidence 489999999999999999999998 77776 77889999999999999999999999998653210 0122567899999
Q ss_pred HHHHhcCCHHHHHHHHhcCCCCCccCCC-------------CCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCC
Q 045083 209 HEAVRLRRVDVVKILIKADPHVPYSANR-------------NSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNE 275 (556)
Q Consensus 209 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-------------~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~ 275 (556)
|.|+..|+.+++++|++++.+. +..+. +|.||||+|+..|+.+++++|++.+.+ ++.+|.
T Consensus 80 ~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------~~~~d~ 152 (232)
T 2rfa_A 80 HIAVINQNVNLVRALLARGASV-SARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGAD------IRAQDS 152 (232)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCC------TTCCCT
T ss_pred HHHHHcCCHHHHHHHHhCCCCC-CcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC------CCCCCC
Confidence 9999999999999999998875 33333 466666666666666666666665543 345555
Q ss_pred CCCchhHHHHhcCCHHHH----HHHHhcCCCCC-----ccccCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q 045083 276 EQNTPLHEAVRLRSVDVA----KILIEADPHVP-----YSANRNSETPLYMAAANGSVKIVAKILQKCPS 336 (556)
Q Consensus 276 ~g~t~Lh~A~~~g~~~~v----~~Ll~~~~~~~-----~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~ 336 (556)
.|+||||+|+..|+.+++ ++|++.|++.. +.+|..|+||||+|+++|+.+++++|+++|+.
T Consensus 153 ~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~ 222 (232)
T 2rfa_A 153 LGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKH 222 (232)
T ss_dssp TSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 666666666666665555 56666655542 34455566666666666666666666655544
No 43
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.2e-33 Score=262.70 Aligned_cols=167 Identities=22% Similarity=0.225 Sum_probs=137.6
Q ss_pred cCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCc
Q 045083 200 TNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNT 279 (556)
Q Consensus 200 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t 279 (556)
.+..|.||||.|+..|+.+++++|++.+.++ +..|..|.||||+|+..|+.+++++|++.+.+......++..+..|.|
T Consensus 41 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t 119 (236)
T 1ikn_D 41 QNNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHT 119 (236)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCC
Confidence 5566667777777777777777777766663 566777778888888888888888888776532211135677889999
Q ss_pred hhHHHHhcCCHHHHHHHHhcCCCCCccccC-CCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCChh
Q 045083 280 PLHEAVRLRSVDVAKILIEADPHVPYSANR-NSETPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVYTYPTD 358 (556)
Q Consensus 280 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~~~~~~ 358 (556)
|||+|+..|+.+++++|+++|++++ .++. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+
T Consensus 120 ~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~ 198 (236)
T 1ikn_D 120 CLHLASIHGYLGIVELLVSLGADVN-AQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTR 198 (236)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCTT-CCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchH
Confidence 9999999999999999999999987 5565 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhC
Q 045083 359 ILERVLIVRG 368 (556)
Q Consensus 359 ~~~~~~~~~~ 368 (556)
+++.++..+.
T Consensus 199 ~~~~Ll~~ga 208 (236)
T 1ikn_D 199 IQQQLGQLTL 208 (236)
T ss_dssp HHHHHHTTSC
T ss_pred HHHHHHHcch
Confidence 9998876543
No 44
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=2e-32 Score=253.89 Aligned_cols=207 Identities=20% Similarity=0.228 Sum_probs=176.1
Q ss_pred CCChHHHHHHHhCcHHHHHHHHHH-hccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCCc-
Q 045083 81 KGDSPLHLAAKKGHTAIVEFLIVF-ANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHVS- 158 (556)
Q Consensus 81 ~g~tpLh~A~~~g~~~iv~~Ll~~-~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~- 158 (556)
.|+||||+|+..|+.+++++|++. +.+ ++.+|..|.||||+|+..|+.+++++|++.+++..
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~----------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~ 65 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCE----------------VHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVF 65 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSC----------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGG
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCC----------------cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhcc
Confidence 589999999999999999999987 655 56689999999999999999999999999998763
Q ss_pred ---ccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHH-------HhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCC
Q 045083 159 ---YSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQ-------MLEKTNEEQNTPLHEAVRLRRVDVVKILIKADP 228 (556)
Q Consensus 159 ---~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~ 228 (556)
...|..|.||||+|+..|+.+++++|++++.+..... ..+..+..|.||||.|+..|+.+++++|++++.
T Consensus 66 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 145 (232)
T 2rfa_A 66 EPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGA 145 (232)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTC
T ss_pred ccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 2456789999999999999999999999987653210 000012379999999999999999999999999
Q ss_pred CCCccCCCCCCCHHHHHHHcCCHHHH----HHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCC
Q 045083 229 HVPYSANRNSETPLYMAVANGSAEIV----AEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVP 304 (556)
Q Consensus 229 ~~~~~~~~~g~t~L~~A~~~g~~~~v----~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~ 304 (556)
++ +.+|.+|+||||+|+..|+.+++ ++|++.+.+.......+.+|..|+||||+|++.|+.+++++|+++|+...
T Consensus 146 ~~-~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~ 224 (232)
T 2rfa_A 146 DI-RAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIA 224 (232)
T ss_dssp CT-TCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC-
T ss_pred CC-CCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccch
Confidence 85 78899999999999999999988 99999987532111225778999999999999999999999999987654
No 45
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.98 E-value=3.6e-31 Score=239.52 Aligned_cols=192 Identities=22% Similarity=0.249 Sum_probs=98.7
Q ss_pred CCcHhHHHHhcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHH
Q 045083 131 QNTPLHEAVRLRSVDVVKILIKADPHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHE 210 (556)
Q Consensus 131 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~ 210 (556)
+.||||.|+..|+.+.++.|++.++......+..|.||||+|+..|+.+++++|++++.+... .+..|.||||.
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~l~~ 78 (201)
T 3hra_A 5 EVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINL------QNSISDSPYLY 78 (201)
T ss_dssp CTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC------CCTTSCCHHHH
T ss_pred cccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------CCCCCCCHHHH
Confidence 344444444444444444444433311113333444444444444444444444444333211 34444455555
Q ss_pred HHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCC-
Q 045083 211 AVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRS- 289 (556)
Q Consensus 211 A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~- 289 (556)
|+..|+.+++++|++.+....+..+..|.||||+|+..|+.+++++|++.+.. .++.+|..|+||||+|+..++
T Consensus 79 A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~~g~t~L~~A~~~~~~ 153 (201)
T 3hra_A 79 AGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGRE-----DIDFQNDFGYTALIEAVGLREG 153 (201)
T ss_dssp HHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCC-----CTTCCCTTSCCHHHHHHHSSCC
T ss_pred HHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCC-----CcCCCCCCCCCHHHHHHHhccc
Confidence 55555555555555333322345555556666666666666666666655521 134555666666666666665
Q ss_pred ----HHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcC
Q 045083 290 ----VDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKC 334 (556)
Q Consensus 290 ----~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 334 (556)
.+++++|+++|++++ .+|..|+||||+|+++|+.+++++|+++|
T Consensus 154 ~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 154 NQLYQDIVKLLMENGADQS-IKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp SHHHHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred hhhHHHHHHHHHHCCCCCC-ccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 666666666666654 55666666666666666666666666544
No 46
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.98 E-value=7.7e-31 Score=237.37 Aligned_cols=193 Identities=25% Similarity=0.257 Sum_probs=174.0
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCH
Q 045083 162 NRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETP 241 (556)
Q Consensus 162 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~ 241 (556)
+..+.||||.|+..|+.+.++.|+..++... +..+..|.||||.|+..|+.+++++|++.+.++ +..+..|.||
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~-----~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~ 75 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQV-----DEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSP 75 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCT-----TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCC-----CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCH
Confidence 3468899999999999999999999886332 237889999999999999999999999999985 7889999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHc
Q 045083 242 LYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAAN 321 (556)
Q Consensus 242 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~ 321 (556)
||+|+..|+.+++++|++.+.. .++..+..|.||||+|+..|+.+++++|++.|+...+.+|..|+||||+|+..
T Consensus 76 l~~A~~~~~~~~~~~Ll~~~~~-----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~ 150 (201)
T 3hra_A 76 YLYAGAQGRTEILAYMLKHATP-----DLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGL 150 (201)
T ss_dssp HHHHHHTTCHHHHHHHHHHSCC-----CTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHS
T ss_pred HHHHHHcCCHHHHHHHHhccCc-----ccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHh
Confidence 9999999999999999965543 25678899999999999999999999999999443458899999999999999
Q ss_pred CC-----HHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCChhHHHHHHH
Q 045083 322 GS-----VKIVAKILQKCPSPAHEGPDGKTALHAAVYTYPTDILERVLI 365 (556)
Q Consensus 322 ~~-----~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~~~~ 365 (556)
++ .+++++|+++|++++.+|..|+||||+|+..++.++++.++.
T Consensus 151 ~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 199 (201)
T 3hra_A 151 REGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQ 199 (201)
T ss_dssp SCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred ccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHh
Confidence 98 999999999999999999999999999999999999988864
No 47
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=2.3e-32 Score=259.99 Aligned_cols=230 Identities=20% Similarity=0.234 Sum_probs=149.1
Q ss_pred cccccCCCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhc---CCHHHHHHHH
Q 045083 75 LFQANAKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRL---RSVDVVKILI 151 (556)
Q Consensus 75 ~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~---g~~~~v~~Ll 151 (556)
.+..|..|+||||+|+..|+.++|+.|++.+.+...++... ....|..|.||||+|+.. |+.+++++|+
T Consensus 6 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~--------~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll 77 (273)
T 2pnn_A 6 EKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDS--------EFKDPETGKTCLLKAMLNLHNGQNDTIALLL 77 (273)
T ss_dssp -----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSG--------GGSCTTTCCCHHHHHHHSCBTTBCHHHHHHH
T ss_pred CCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCc--------ccccCcCCCCHHHHHHHHHhcCChHHHHHHH
Confidence 45678999999999999999999999998765433221100 113578899999999976 9999999999
Q ss_pred hcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCC
Q 045083 152 KADPHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVP 231 (556)
Q Consensus 152 ~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~ 231 (556)
+.+++... ++.++..... ..+..|.||||+|+..|+.+++++|++.++++
T Consensus 78 ~~ga~~~~---------------------~~~~i~~~~~--------~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~- 127 (273)
T 2pnn_A 78 DVARKTDS---------------------LKQFVNASYT--------DSYYKGQTALHIAIERRNMTLVTLLVENGADV- 127 (273)
T ss_dssp HHHHHTTC---------------------HHHHHTCCCC--------STTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-
T ss_pred Hhhccccc---------------------hhHHhhcccc--------cccCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-
Confidence 98754321 0111111100 02334444444444444444444444444443
Q ss_pred ccC--------------CCCCCCHHHHHHHcCCHHHHHHHHH---cCChhHHHHHhhhcCCCCCchhHHHHhcCC-----
Q 045083 232 YSA--------------NRNSETPLYMAVANGSAEIVAEILQ---NCPESAARQMLEKTNEEQNTPLHEAVRLRS----- 289 (556)
Q Consensus 232 ~~~--------------~~~g~t~L~~A~~~g~~~~v~~Ll~---~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~----- 289 (556)
+.. +..|.||||+|+..|+.+++++|++ .+.+ ++.+|..|+||||+|+..|+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad------~~~~d~~g~tpLh~A~~~~~~~~~~ 201 (273)
T 2pnn_A 128 QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD------ISARDSVGNTVLHALVEVADNTVDN 201 (273)
T ss_dssp TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC------TTCCCTTSCCHHHHHHHHCCSCHHH
T ss_pred CccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC------ceeeCCCCCcHHHHHHHccCcchhH
Confidence 222 3478888888888888888888888 6653 56777888888888888887
Q ss_pred ----HHHHHHHHhcCCCCC------ccccCCCCCHHHHHHHcCCHHHHHHHHhcCC-CCCCCCCCCCcHH
Q 045083 290 ----VDVAKILIEADPHVP------YSANRNSETPLYMAAANGSVKIVAKILQKCP-SPAHEGPDGKTAL 348 (556)
Q Consensus 290 ----~~~v~~Ll~~~~~~~------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~-~~~~~d~~g~t~L 348 (556)
.+++++|+++|++++ +.+|..|+||||+|+++|+.+++++|+++|+ ++......+.+|-
T Consensus 202 ~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~~~ 271 (273)
T 2pnn_A 202 TKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAAAHHHH 271 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC-------------
T ss_pred HHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhhhhhcc
Confidence 788888888887765 2478888999999999999999999888888 6777776666653
No 48
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=7.4e-31 Score=247.09 Aligned_cols=206 Identities=21% Similarity=0.198 Sum_probs=128.8
Q ss_pred CCChHHHHHHHhCcHH----HHHHHHHHhccCCchhhhhhhHHHHHHHhh----hccCCCcHhHHHHhc---CCHHHHHH
Q 045083 81 KGDSPLHLAAKKGHTA----IVEFLIVFANRQPIDLERGVESAARQILKM----TNEEQNTPLHEAVRL---RSVDVVKI 149 (556)
Q Consensus 81 ~g~tpLh~A~~~g~~~----iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~----~~~~g~t~Lh~A~~~---g~~~~v~~ 149 (556)
.|+||||.|+..|+.+ ++++|++.+.+ ++. .|..|.||||+|+.. |+.+++++
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~----------------i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~ 64 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKY----------------LTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMP 64 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCC----------------TTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCC----------------cccccccCCCCCCCHHHHHHHccccchHHHHHH
Confidence 4789999999999997 55666667766 344 688999999999999 99999999
Q ss_pred HHhcCCCCccc----------ccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHH
Q 045083 150 LIKADPHVSYS----------ANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDV 219 (556)
Q Consensus 150 Ll~~~~~~~~~----------~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 219 (556)
|++.+++.... .|..|.||||+|+..|+.+++++|++++++... .+..+..+
T Consensus 65 Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~------~~~~~~~~------------ 126 (256)
T 2etb_A 65 LLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHL------RACGRFFQ------------ 126 (256)
T ss_dssp HHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCCSGGGS------------
T ss_pred HHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------cccccccc------------
Confidence 99987765421 234577777777777777777777776654322 23220000
Q ss_pred HHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHH---cCChhHHHHHhhhcCCCCCchhHHHHh--cCCHH---
Q 045083 220 VKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQ---NCPESAARQMLEKTNEEQNTPLHEAVR--LRSVD--- 291 (556)
Q Consensus 220 v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~---~~~~~~~~~~~~~~~~~g~t~Lh~A~~--~g~~~--- 291 (556)
.+ ....+..|.||||+|+..|+.+++++|++ .+.+ ++.+|..|+||||+|+. .++.+
T Consensus 127 --------~~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~------~n~~d~~g~TpLh~A~~~~~~~~~~~~ 191 (256)
T 2etb_A 127 --------KH-QGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS------LEATDSLGNTVLHALVMIADNSPENSA 191 (256)
T ss_dssp --------CC-SSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC------TTCCCTTSCCHHHHHHHHCCSCHHHHH
T ss_pred --------cc-ccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC------cCccCCCCCCHHHHHHHcccCCchhhH
Confidence 00 01112225555555555555555555555 4442 34555555555555555 55555
Q ss_pred ----HHHHHHhcCCCCC------ccccCCCCCHHHHHHHcCCHHHHHHHHhcCC
Q 045083 292 ----VAKILIEADPHVP------YSANRNSETPLYMAAANGSVKIVAKILQKCP 335 (556)
Q Consensus 292 ----~v~~Ll~~~~~~~------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~ 335 (556)
++++|+++|+++. +.+|..|+||||+|++.|+.+++++|+++|+
T Consensus 192 ~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 245 (256)
T 2etb_A 192 LVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREF 245 (256)
T ss_dssp HHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCC
Confidence 6666666555542 3455566666666666666666666665554
No 49
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=3.4e-31 Score=251.90 Aligned_cols=245 Identities=17% Similarity=0.185 Sum_probs=167.8
Q ss_pred hcccccccCCCCeeEEeeeccccccccccccccccchHHHHHHHHhhCccccc----cccCCCChHHHHHHHh---CcHH
Q 045083 24 ELESIVTDVMKNTVLHVNIMRSHLTLQTEEGEISSESTEFVEQILDLCPSLLF----QANAKGDSPLHLAAKK---GHTA 96 (556)
Q Consensus 24 g~~~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~g~tpLh~A~~~---g~~~ 96 (556)
+...+..|..|+||||.|+..|+. ++++.|++.....+..++ ..|..|.||||+|+.. |+.+
T Consensus 3 ~a~~~~~d~~g~t~L~~A~~~g~~-----------~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~ 71 (273)
T 2pnn_A 3 SAGEKPPRLYDRRSIFDAVAQSNC-----------QELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQND 71 (273)
T ss_dssp --------CCCHHHHHHHHHTTCS-----------STTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCH
T ss_pred cccCCCCCcccchHHHHHHHcCCH-----------HHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChH
Confidence 444556778999999999999999 999999775444444443 4588999999999987 9999
Q ss_pred HHHHHHHHhccCCchhhhhhhHHHHHHHhh----hccCCCcHhHHHHhcCCHHHHHHHHhcCCCCcccccCCCCcHHHHH
Q 045083 97 IVEFLIVFANRQPIDLERGVESAARQILKM----TNEEQNTPLHEAVRLRSVDVVKILIKADPHVSYSANRNSETLLYMA 172 (556)
Q Consensus 97 iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~----~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A 172 (556)
+|++|++.|++... .+..++. .|..|.||||+|+..|+.+++++|+++|++++ ..+..+..
T Consensus 72 ~v~~Ll~~ga~~~~---------~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~~~----- 136 (273)
T 2pnn_A 72 TIALLLDVARKTDS---------LKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQ-AAANGDFF----- 136 (273)
T ss_dssp HHHHHHHHHHHTTC---------HHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCBCSGGG-----
T ss_pred HHHHHHHhhccccc---------hhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC-cccccccc-----
Confidence 99999999876431 1112232 56789999999999999999999999998887 33432200
Q ss_pred HHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHh---cCCCCCccCCCCCCCHHHHHHHcC
Q 045083 173 VANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIK---ADPHVPYSANRNSETPLYMAVANG 249 (556)
Q Consensus 173 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~---~~~~~~~~~~~~g~t~L~~A~~~g 249 (556)
... . ....+..|.||||.|+..|+.+++++|++ .+.++ +.+|.+|+||||+|+..|
T Consensus 137 -------------~~~-~------~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~-~~~d~~g~tpLh~A~~~~ 195 (273)
T 2pnn_A 137 -------------KKT-K------GRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADI-SARDSVGNTVLHALVEVA 195 (273)
T ss_dssp -------------SSC-S------SSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCT-TCCCTTSCCHHHHHHHHC
T ss_pred -------------ccc-c------ccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCc-eeeCCCCCcHHHHHHHcc
Confidence 000 0 01145578888888888888888888888 77774 678888888888888887
Q ss_pred C---------HHHHHHHHHcCChhHH-HHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHH
Q 045083 250 S---------AEIVAEILQNCPESAA-RQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPL 315 (556)
Q Consensus 250 ~---------~~~v~~Ll~~~~~~~~-~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L 315 (556)
+ .+++++|++.+.+... ...++.+|..|+||||+|++.|+.+++++|+++|+..+......+.+|-
T Consensus 196 ~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~~~ 271 (273)
T 2pnn_A 196 DNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAAAHHHH 271 (273)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC-------------
T ss_pred CcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhhhhhcc
Confidence 7 7888888887754210 0011467788999999999999999999999988855545555555543
No 50
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=9.1e-31 Score=246.49 Aligned_cols=211 Identities=18% Similarity=0.148 Sum_probs=156.6
Q ss_pred CCCcHhHHHHhcCCHH----HHHHHHhcCCCCcc---cccCCCCcHHHHHHHc---CCHHHHHHHHHhCCChhHHH-Hhh
Q 045083 130 EQNTPLHEAVRLRSVD----VVKILIKADPHVSY---SANRNSETLLYMAVAN---GSAEIVAEILQNCPQSAARQ-MLE 198 (556)
Q Consensus 130 ~g~t~Lh~A~~~g~~~----~v~~Ll~~~~~~~~---~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~~-~~~ 198 (556)
.|+||||.|+..|+.+ ++++|++.+.+++. ..|..|.||||+|+.. |+.+++++|++.+.+..... .++
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 4789999999999997 66777778888873 3688899999999998 99999999998764321100 000
Q ss_pred ----hcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcC
Q 045083 199 ----KTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTN 274 (556)
Q Consensus 199 ----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~ 274 (556)
..+..|.||||.|+..|+.+++++|++.++++ +..+..+..+ . ..+..+
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~--------------------~------~~~~~~ 133 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV-HLRACGRFFQ--------------------K------HQGTCF 133 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGS--------------------C------CSSSCC
T ss_pred cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCC-Cccccccccc--------------------c------cccccc
Confidence 01234555555555555555555555554442 2333222110 0 011223
Q ss_pred CCCCchhHHHHhcCCHHHHHHHHh---cCCCCCccccCCCCCHHHHHHH--cCCHH-------HHHHHHhcCCCC-----
Q 045083 275 EEQNTPLHEAVRLRSVDVAKILIE---ADPHVPYSANRNSETPLYMAAA--NGSVK-------IVAKILQKCPSP----- 337 (556)
Q Consensus 275 ~~g~t~Lh~A~~~g~~~~v~~Ll~---~~~~~~~~~~~~g~t~L~~A~~--~~~~~-------~v~~Ll~~~~~~----- 337 (556)
..|.||||+|+..|+.+++++|++ .|++++ .+|..|+||||+|+. +++.+ ++++|+++|+++
T Consensus 134 ~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n-~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~ 212 (256)
T 2etb_A 134 YFGELPLSLAACTKQWDVVTYLLENPHQPASLE-ATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQ 212 (256)
T ss_dssp CSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTT-CCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCC
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhccccCCCcC-ccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccc
Confidence 349999999999999999999999 999986 789999999999999 88888 999999999998
Q ss_pred --CCCCCCCCcHHHHHHhcCChhHHHHHHHhhC
Q 045083 338 --AHEGPDGKTALHAAVYTYPTDILERVLIVRG 368 (556)
Q Consensus 338 --~~~d~~g~t~L~~A~~~~~~~~~~~~~~~~~ 368 (556)
+.+|..|+||||+|+..++.++++.++....
T Consensus 213 ~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 245 (256)
T 2etb_A 213 LEEISNHQGLTPLKLAAKEGKIEIFRHILQREF 245 (256)
T ss_dssp GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cccccCCCCCCHHHHHHHhCCHHHHHHHHhCCC
Confidence 8999999999999999999999999887654
No 51
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=3.8e-31 Score=230.47 Aligned_cols=158 Identities=25% Similarity=0.372 Sum_probs=139.3
Q ss_pred CHHHHHHHhcCCchHHHHhhhhhcccccccCCCCeeEEeeeccccccccccccccccchHHHHHHHHhhCccccccccCC
Q 045083 2 DRKLYEAAAKGDIEPFREIARDELESIVTDVMKNTVLHVNIMRSHLTLQTEEGEISSESTEFVEQILDLCPSLLFQANAK 81 (556)
Q Consensus 2 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 81 (556)
.++|+.||+.|+.++|+.|+++|++++.+|.+|+||||+|+..|+. ++++.+++ . +.+++.+|.+
T Consensus 5 g~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~-----------~~~~~ll~---~-gad~~~~d~~ 69 (169)
T 4gpm_A 5 GKRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHK-----------EVVKLLIS---K-GADVNAKDSD 69 (169)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH-----------HHHHHHHH---T-TCCTTCCCTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCH-----------HHHHHHHh---c-ccchhhhccC
Confidence 4689999999999999999999999999999999999999999999 99999854 3 5667888999
Q ss_pred CChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCCcccc
Q 045083 82 GDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHVSYSA 161 (556)
Q Consensus 82 g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~ 161 (556)
|+||||+|+..|+.++|++|+++|++ ++.+|.+|+||||+|+..|+.+++++|++.|++++ ..
T Consensus 70 g~TpLh~A~~~g~~~~v~~Ll~~gad----------------vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~-~~ 132 (169)
T 4gpm_A 70 GRTPLHHAAENGHKEVVKLLISKGAD----------------VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVN-TS 132 (169)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCC----------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCcCC----------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-cc
Confidence 99999999999999999999999887 56688899999999999999999999999999887 77
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHhCCCh
Q 045083 162 NRNSETLLYMAVANGSAEIVAEILQNCPQS 191 (556)
Q Consensus 162 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~ 191 (556)
|..|.||||+|+..|+.+++++|++++++.
T Consensus 133 d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 133 DSDGRTPLDLAREHGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 888999999999999999999999988764
No 52
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=2.2e-29 Score=219.30 Aligned_cols=156 Identities=26% Similarity=0.427 Sum_probs=80.5
Q ss_pred HHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHc
Q 045083 169 LYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVAN 248 (556)
Q Consensus 169 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~ 248 (556)
|+.|++.|+.++|+.|++.+.+.. .++..|.||||.|+..++.+++++|++.+.++ +.+|.+|+||||+|+..
T Consensus 8 L~~Aa~~G~~~~v~~Ll~~Gadvn------~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~ 80 (169)
T 4gpm_A 8 LIEAAENGNKDRVKDLIENGADVN------ASDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAEN 80 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTT------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCC------CcCCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHc
Confidence 444444444444444444443321 13444444555555555555555555544442 44555555555555555
Q ss_pred CCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHH
Q 045083 249 GSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVA 328 (556)
Q Consensus 249 g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~ 328 (556)
|+.+++++|++.+.+ ++.+|.+|+||||+|+..|+.+++++|++.|++++ .+|..|+||||+|+++|+.++++
T Consensus 81 g~~~~v~~Ll~~gad------vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~-~~d~~G~TpL~~A~~~g~~~iv~ 153 (169)
T 4gpm_A 81 GHKEVVKLLISKGAD------VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVN-TSDSDGRTPLDLAREHGNEEVVK 153 (169)
T ss_dssp TCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHH
T ss_pred CCHHHHHHHHHCcCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHHcCCHHHHH
Confidence 555555555555542 34555556666666666666666666666665554 45556666666666666666666
Q ss_pred HHHhcCCCCC
Q 045083 329 KILQKCPSPA 338 (556)
Q Consensus 329 ~Ll~~~~~~~ 338 (556)
+|+++|++++
T Consensus 154 ~Ll~~GA~ie 163 (169)
T 4gpm_A 154 LLEKQGGWLE 163 (169)
T ss_dssp HHHTC-----
T ss_pred HHHHCCCCcC
Confidence 6666665544
No 53
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=5.8e-30 Score=241.60 Aligned_cols=202 Identities=20% Similarity=0.254 Sum_probs=138.5
Q ss_pred ccCCCcHhHHHHhcCCHHHHHH----HHhcCCCCccc---ccCCCCcHHHHHH---HcCCHHHHHHHHHhCCChhHHHH-
Q 045083 128 NEEQNTPLHEAVRLRSVDVVKI----LIKADPHVSYS---ANRNSETLLYMAV---ANGSAEIVAEILQNCPQSAARQM- 196 (556)
Q Consensus 128 ~~~g~t~Lh~A~~~g~~~~v~~----Ll~~~~~~~~~---~~~~g~t~L~~A~---~~g~~~~v~~Ll~~~~~~~~~~~- 196 (556)
+..|+|+||.|++.|+.+.++. |++.+.+++.. .+..|.||||+|+ ..|+.+++++|++.+.+......
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 81 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREF 81 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhh
Confidence 5678999999999999995544 44488877632 2367999999999 67999999999998643211100
Q ss_pred ----hhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCC--------------CCCCCHHHHHHHcCCHHHHHHHH
Q 045083 197 ----LEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSAN--------------RNSETPLYMAVANGSAEIVAEIL 258 (556)
Q Consensus 197 ----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~--------------~~g~t~L~~A~~~g~~~~v~~Ll 258 (556)
+...+..|.||||.|+..|+.+++++|++.++++ +..+ ..|.||||+|+..|+.+++++|+
T Consensus 82 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 160 (260)
T 3jxi_A 82 INSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADV-HAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLT 160 (260)
T ss_dssp HTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHH
T ss_pred hcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCc-CccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 1113347778888888888888888888877774 4444 45677777777777777777777
Q ss_pred H---cCChhHHHHHhhhcCCCCCchhHHHHhcCC---------HHHHHHHHhcCCCCC------ccccCCCCCHHHHHHH
Q 045083 259 Q---NCPESAARQMLEKTNEEQNTPLHEAVRLRS---------VDVAKILIEADPHVP------YSANRNSETPLYMAAA 320 (556)
Q Consensus 259 ~---~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~---------~~~v~~Ll~~~~~~~------~~~~~~g~t~L~~A~~ 320 (556)
+ .+.+ ++.+|..|+||||+|+..++ .+++++|+++|++++ +.+|..|+||||+|++
T Consensus 161 ~~~~~ga~------~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~ 234 (260)
T 3jxi_A 161 ENGHKQAD------LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAK 234 (260)
T ss_dssp HCSSCCCC------TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred hccccCCC------CcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHH
Confidence 6 5543 45566667777777776665 566777777666552 2456667777777777
Q ss_pred cCCHHHHHHHHhcCCC
Q 045083 321 NGSVKIVAKILQKCPS 336 (556)
Q Consensus 321 ~~~~~~v~~Ll~~~~~ 336 (556)
+|+.+++++|+++|++
T Consensus 235 ~g~~~~v~~Ll~~g~~ 250 (260)
T 3jxi_A 235 TGKIGIFQHIIRREIA 250 (260)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHhCCC
Confidence 7777777776666543
No 54
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=3.1e-29 Score=236.60 Aligned_cols=206 Identities=16% Similarity=0.146 Sum_probs=168.0
Q ss_pred cCCCChHHHHHHHhCcHHHHHHHHH----HhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHH---hcCCHHHHHHHH
Q 045083 79 NAKGDSPLHLAAKKGHTAIVEFLIV----FANRQPIDLERGVESAARQILKMTNEEQNTPLHEAV---RLRSVDVVKILI 151 (556)
Q Consensus 79 ~~~g~tpLh~A~~~g~~~iv~~Ll~----~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~---~~g~~~~v~~Ll 151 (556)
+..|+||||.|++.|+.+.++.|++ .+.+.+.. -...|..|.||||+|+ +.|+.+++++|+
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~------------~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll 69 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDE------------EFREPSTGKTCLPKALLNLSAGRNDTIPILL 69 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSG------------GGSCTTTCCCHHHHHHTSCBTTBCTHHHHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchh------------hhhccCCCCcHHHHHHHHhhcCCHHHHHHHH
Confidence 5678999999999999996555555 66653221 0123477999999999 789999999999
Q ss_pred hcCCCCc----------ccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcC--------------CCCCcH
Q 045083 152 KADPHVS----------YSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTN--------------EEQNTP 207 (556)
Q Consensus 152 ~~~~~~~----------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~--------------~~g~t~ 207 (556)
+.+.+.. ...|..|.||||+|+..|+.+++++|++++.+... .+ ..|.||
T Consensus 70 ~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~------~~~~~~~~~~~~~~~~~~g~tp 143 (260)
T 3jxi_A 70 DIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHA------QARGRFFQPKDEGGYFYFGELP 143 (260)
T ss_dssp HHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCEECCCSSSCCCCSCCSCSSH
T ss_pred HhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCc------cccccccCcccccccccCCCCH
Confidence 9865421 13445899999999999999999999999876543 44 579999
Q ss_pred hHHHHhcCCHHHHHHHHh---cCCCCCccCCCCCCCHHHHHHHcCC---------HHHHHHHHHcCChhHH-HHHhhhcC
Q 045083 208 LHEAVRLRRVDVVKILIK---ADPHVPYSANRNSETPLYMAVANGS---------AEIVAEILQNCPESAA-RQMLEKTN 274 (556)
Q Consensus 208 L~~A~~~~~~~~v~~Ll~---~~~~~~~~~~~~g~t~L~~A~~~g~---------~~~v~~Ll~~~~~~~~-~~~~~~~~ 274 (556)
||.|+..|+.+++++|++ .+.++ +.+|.+|+||||+|+..|+ .+++++|++.+.+... ....+.+|
T Consensus 144 L~~A~~~g~~~~v~~Ll~~~~~ga~~-~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d 222 (260)
T 3jxi_A 144 LSLAACTNQPHIVHYLTENGHKQADL-RRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLN 222 (260)
T ss_dssp HHHHHHTTCHHHHHHHHHCSSCCCCT-TCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCC
T ss_pred HHHHHHcCCHHHHHHHHhccccCCCC-cccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhccc
Confidence 999999999999999999 88885 7899999999999999888 7999999998864200 00015688
Q ss_pred CCCCchhHHHHhcCCHHHHHHHHhcCCCC
Q 045083 275 EEQNTPLHEAVRLRSVDVAKILIEADPHV 303 (556)
Q Consensus 275 ~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~ 303 (556)
..|+||||+|++.|+.+++++|+++|++.
T Consensus 223 ~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 223 NDGLSPLMMAAKTGKIGIFQHIIRREIAD 251 (260)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhCCCc
Confidence 99999999999999999999999998764
No 55
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=3.7e-28 Score=230.69 Aligned_cols=189 Identities=20% Similarity=0.203 Sum_probs=123.6
Q ss_pred cHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHH
Q 045083 167 TLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAV 246 (556)
Q Consensus 167 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~ 246 (556)
+++|.|+..|+.+.++.+++...+ ..++..|.+|.||||+|+..|+.+++++|++.++...+..+..|.||||+|+
T Consensus 78 ~~l~~a~~~~~~~~~~~l~~~~~~----~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~ 153 (276)
T 4hbd_A 78 SDAHPELVRRHLVTFRAMSARLLD----YVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTA 153 (276)
T ss_dssp TTCCHHHHHHHHHHHHHHCHHHHH----HHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGG
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHh----hcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHH
Confidence 444555555555555555443211 1133356667777777777777777777777666334666677777777776
Q ss_pred -----HcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHc
Q 045083 247 -----ANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAAN 321 (556)
Q Consensus 247 -----~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~ 321 (556)
..++.++++.|++.+.. .+..+..|+||||+|+..|+.+++++|++.|++++ .+|..|+||||+|+.+
T Consensus 154 ~~~~~~~~~~~~v~~Ll~~g~~------~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n-~~d~~G~TpLh~A~~~ 226 (276)
T 4hbd_A 154 LATLKTQDDIETVLQLFRLGNI------NAKASQAGQTALMLAVSHGRVDVVKALLACEADVN-VQDDDGSTALMCACEH 226 (276)
T ss_dssp GCCCCSHHHHHHHHHHHHHSCT------TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHH
T ss_pred HHHhhhhhhHHHHHHHHHcCCC------ccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC-CCCCCCCCHHHHHHHC
Confidence 45666777777776642 34455667777777777777777777777777764 5667777777777777
Q ss_pred CCHHHHHHHHh-cCCCCCCCCCCCCcHHHHHHhcCChhHHHHHHHh
Q 045083 322 GSVKIVAKILQ-KCPSPAHEGPDGKTALHAAVYTYPTDILERVLIV 366 (556)
Q Consensus 322 ~~~~~v~~Ll~-~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~~~~~ 366 (556)
|+.+++++|++ .|++++.+|..|+||||+|+..++.++++.++..
T Consensus 227 g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 272 (276)
T 4hbd_A 227 GHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSR 272 (276)
T ss_dssp TCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 77777777777 6777777777777777777777777777666543
No 56
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=7.8e-28 Score=211.67 Aligned_cols=169 Identities=20% Similarity=0.216 Sum_probs=118.2
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHH
Q 045083 166 ETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMA 245 (556)
Q Consensus 166 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A 245 (556)
.+|||.|+..|+.+++++|++.++... +..+..|.||||.|+..|+.+++++|++.+.+. +..+..|.||||+|
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~-----~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A 76 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLV-----NKPDERGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLA 76 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGG-----GCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHH
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccc-----cCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHH
Confidence 456666666666666666666654422 225666777777777777777777777776663 56677777788887
Q ss_pred HHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHH
Q 045083 246 VANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVK 325 (556)
Q Consensus 246 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 325 (556)
+..|+.+++++|++.+.+ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+.+|+.+
T Consensus 77 ~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~~~~~~ 149 (172)
T 3v30_A 77 STGGYTDIVGLLLERDVD------INIYDWNGGTPLLYAVRGNHVKCVEALLARGADLT-TEADSGYTPMDLAVALGYRK 149 (172)
T ss_dssp HHTTCHHHHHHHHTTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHH
T ss_pred HHCCCHHHHHHHHHcCCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHHhCcHH
Confidence 777778888877777753 45667778888888888888888888888887765 66778888888888888888
Q ss_pred HHHHHHhcCCCCCCCCCCCCcH
Q 045083 326 IVAKILQKCPSPAHEGPDGKTA 347 (556)
Q Consensus 326 ~v~~Ll~~~~~~~~~d~~g~t~ 347 (556)
++++|+++++++..++..|.||
T Consensus 150 ~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 150 VQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHHHHHHHHHSCC-------
T ss_pred HHHHHHHHHHHHhcccCCCCCC
Confidence 8888888887777777777766
No 57
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.95 E-value=2.2e-31 Score=261.70 Aligned_cols=288 Identities=13% Similarity=0.060 Sum_probs=181.9
Q ss_pred cCCchHHHHhhhhhcccccccCCCCeeEEeeec-cccccccccccccccchHHHHHHHHhhCccccccccCCCChHHHHH
Q 045083 11 KGDIEPFREIARDELESIVTDVMKNTVLHVNIM-RSHLTLQTEEGEISSESTEFVEQILDLCPSLLFQANAKGDSPLHLA 89 (556)
Q Consensus 11 ~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~-~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpLh~A 89 (556)
.+..+.+..+++++.+.+. ..+.+++++|.. .++. +..+++.+ .+.+++||||+|
T Consensus 44 ~~~~~~~~~~~~~~~~~~~--~~~ll~~~~a~~~~~~~-----------~~~~~l~~-----------~g~~~~T~Lh~A 99 (376)
T 2aja_A 44 LSYKEAIHIFLPGTKNMEQ--VRQLLCLYYAHYNRNAK-----------QLWSDAHK-----------KGIKSEVICFVA 99 (376)
T ss_dssp SCHHHHHHHCCCCSSHHHH--HHHHHHHHHHHTTTTCT-----------THHHHHHH-----------HTCCHHHHHHHH
T ss_pred ccHHHHHHHHhcCCCCHHH--HHHHHHHHHHHhcCCCH-----------HHHHHHHH-----------cCCCcCCHHHHH
Confidence 3344555555544333321 123345555544 3555 66666633 234556999999
Q ss_pred HHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCCc--ccccCCCCc
Q 045083 90 AKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHVS--YSANRNSET 167 (556)
Q Consensus 90 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~--~~~~~~g~t 167 (556)
|+.|+.++|++|++.++.... ....+..|.||||+|+..|+.+++++|+++|++.. ...+.+ .|
T Consensus 100 a~~G~~e~v~~Ll~~ga~~~~-------------~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~T 165 (376)
T 2aja_A 100 AITGCSSALDTLCLLLTSDEI-------------VKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YH 165 (376)
T ss_dssp HHHCCHHHHHHHTTC--CCSS-------------CC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HH
T ss_pred HHcCCHHHHHHHHHcCCcHHH-------------HHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CC
Confidence 999999999999988763210 11234567889999999999999999999997521 112223 89
Q ss_pred HHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHH-hcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHH
Q 045083 168 LLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAV-RLRRVDVVKILIKADPHVPYSANRNSETPLYMAV 246 (556)
Q Consensus 168 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~-~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~ 246 (556)
|||+|+..|+.+++++|++++++... +..+..|.||||.|+ ..|+.+++++|++.+. .|.||||+|+
T Consensus 166 pLh~Aa~~G~~eiv~~Ll~~ga~~~~----~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga--------~~~taL~~Aa 233 (376)
T 2aja_A 166 AFRLAAENGHLHVLNRLCELAPTEAT----AMIQAENYYAFRWAAVGRGHHNVINFLLDCPV--------MLAYAEIHEF 233 (376)
T ss_dssp HHHHHHHTTCHHHHHHHHHSCGGGHH----HHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH--------HHHHHHHCTT
T ss_pred HHHHHHHCCCHHHHHHHHHcCCccch----hccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC--------ccchHHHHHH
Confidence 99999999999999999999876432 014566889999999 9999999999998653 2789999999
Q ss_pred HcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCC---------------------------HHHHHHHHhc
Q 045083 247 ANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRS---------------------------VDVAKILIEA 299 (556)
Q Consensus 247 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~---------------------------~~~v~~Ll~~ 299 (556)
..|+.+++++|++.+.+.. ..+ ++++.|+.+|+ .+.+++|++.
T Consensus 234 ~~g~~evv~lL~~~ga~~~------~~~----~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~ 303 (376)
T 2aja_A 234 EYGEKYVNPFIARHVNRLK------EMH----DAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSI 303 (376)
T ss_dssp TTTTTTHHHHHHHHHHHHH------HHH----TTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTS
T ss_pred HCCCHHHHHHHHhcCcccc------ccc----HHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhC
Confidence 9999999999999875422 111 24444444444 3445555543
Q ss_pred CCCC----CccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCChhHHH
Q 045083 300 DPHV----PYSANRNSETPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVYTYPTDILE 361 (556)
Q Consensus 300 ~~~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~ 361 (556)
+..- .......+.||||+|+..|+.+++++|++.+ ..+|..|+|++.+|...|..++.+
T Consensus 304 ~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~~---~v~~~~~~~~~~~~~~~~~~~~~~ 366 (376)
T 2aja_A 304 PGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIP---SVLALTKANNYYINETGGRLDLRA 366 (376)
T ss_dssp TTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTSH---HHHHSCC-----------------
T ss_pred hhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHcCh---HHHHHHHHhccccccccccccHHH
Confidence 2100 0011235678899999999999999987653 566778888888888877776643
No 58
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=6.4e-28 Score=229.09 Aligned_cols=189 Identities=18% Similarity=0.278 Sum_probs=111.8
Q ss_pred CcHhHHHHhcCCHHHHHHHHhcCCC--CcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhH
Q 045083 132 NTPLHEAVRLRSVDVVKILIKADPH--VSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLH 209 (556)
Q Consensus 132 ~t~Lh~A~~~g~~~~v~~Ll~~~~~--~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~ 209 (556)
.+++|.|+..|+.+.++.+++.+.+ ++ ..|..|.||||+|+..|+.+++++|++.++... +..+..|.||||
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~~~~~~~~n-~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~-----~~~~~~g~tpL~ 150 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSARLLDYVVN-IADSNGNTALHYSVSHANFPVVQQLLDSGVCKV-----DKQNRAGYSPIM 150 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCHHHHHHHHT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCT-----TCCCTTSCCHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhhcCc-CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcC-----CCCCCCCCCHHH
Confidence 3444555555555554444443222 11 334445555555555555555555555443111 114555555555
Q ss_pred HHH-----hcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHH
Q 045083 210 EAV-----RLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEA 284 (556)
Q Consensus 210 ~A~-----~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A 284 (556)
.|+ ..++.++++.|++.+.. ....+..|+||||+|+..|+.+++++|++.+.+ ++.+|..|+||||+|
T Consensus 151 ~a~~~~~~~~~~~~~v~~Ll~~g~~-~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad------~n~~d~~G~TpLh~A 223 (276)
T 4hbd_A 151 LTALATLKTQDDIETVLQLFRLGNI-NAKASQAGQTALMLAVSHGRVDVVKALLACEAD------VNVQDDDGSTALMCA 223 (276)
T ss_dssp HGGGCCCCSHHHHHHHHHHHHHSCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHH
T ss_pred HHHHHHhhhhhhHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC------CCCCCCCCCCHHHHH
Confidence 555 34556666666666644 345566677777777777777777777776653 456667777777777
Q ss_pred HhcCCHHHHHHHHh-cCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcC
Q 045083 285 VRLRSVDVAKILIE-ADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKC 334 (556)
Q Consensus 285 ~~~g~~~~v~~Ll~-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 334 (556)
+..|+.+++++|++ .|++++ .+|..|+||||+|+++|+.+++++|+++.
T Consensus 224 ~~~g~~~iv~~Ll~~~gad~~-~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 224 CEHGHKEIAGLLLAVPSCDIS-LTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHTCHHHHHHHHTSTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHCCCHHHHHHHHhcCCCCCc-CcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 77777777777777 666654 56777777777777777777777776654
No 59
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=1e-27 Score=215.03 Aligned_cols=163 Identities=20% Similarity=0.230 Sum_probs=125.6
Q ss_pred ccccccCCCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhc
Q 045083 74 LLFQANAKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKA 153 (556)
Q Consensus 74 ~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~ 153 (556)
..+.+|..|.||||+|+..|+.+++++|++.+.+ ++..|..|.||||+|+..|+.+++++|++.
T Consensus 27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~----------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 90 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACMLGMENAIDKLVENFDK----------------LEDKDIEGSTALIWAVKNNRLGIAEKLLSK 90 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCC----------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccc----------------cccccccCccHHHHHHHcCCHHHHHHHHHC
Confidence 4567788888999999999999999999888776 455678888888888888888888888888
Q ss_pred CCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCcc
Q 045083 154 DPHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYS 233 (556)
Q Consensus 154 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~ 233 (556)
+++++ ..+..|.||||+|+..|+.+++++|++++.+... .+..|.||||.|+..|+.+++++|++.+.+. +.
T Consensus 91 g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~ 162 (192)
T 2rfm_A 91 GSNVN-TKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVND------RNLEGETPLIVASKYGRSEIVKKLLELGADI-SA 162 (192)
T ss_dssp TCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TC
T ss_pred CCCCC-CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CC
Confidence 88776 6677788888888888888888888877655322 5667777777777777777777777777663 56
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 045083 234 ANRNSETPLYMAVANGSAEIVAEILQN 260 (556)
Q Consensus 234 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 260 (556)
+|..|.||||+|+..|+.+++++|++.
T Consensus 163 ~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 189 (192)
T 2rfm_A 163 RDLTGLTAEASARIFGRQEVIKIFTEV 189 (192)
T ss_dssp BCTTSCBHHHHHHHTTCHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHhCcHHHHHHHHhc
Confidence 667777777777777777777777654
No 60
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=2.1e-27 Score=212.94 Aligned_cols=162 Identities=22% Similarity=0.254 Sum_probs=144.8
Q ss_pred hhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCC
Q 045083 198 EKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQ 277 (556)
Q Consensus 198 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g 277 (556)
+.++..|.||||.|+..|+.+++++|++.+.++ +..+..|+||||+|+..|+.+++++|++.+.+ ++.+|..|
T Consensus 29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g 101 (192)
T 2rfm_A 29 NYRDSYNRTPLMVACMLGMENAIDKLVENFDKL-EDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN------VNTKDFSG 101 (192)
T ss_dssp TCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC------TTCCCTTS
T ss_pred hCcCCCCCCHHHHHHHcCCHHHHHHHHHhcccc-ccccccCccHHHHHHHcCCHHHHHHHHHCCCC------CCCCCCCC
Confidence 347889999999999999999999999988874 67888899999999999999999999998874 56778889
Q ss_pred CchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCCh
Q 045083 278 NTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVYTYPT 357 (556)
Q Consensus 278 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~~~~~ 357 (556)
.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+.+|+.+++++|+++|++++.+|..|+||||+|+..++.
T Consensus 102 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~ 180 (192)
T 2rfm_A 102 KTPLMWSIIFGYSEMSYFLLEHGANVN-DRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQ 180 (192)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSS-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCH
T ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcH
Confidence 999999999999999999999999876 7788999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhh
Q 045083 358 DILERVLIVR 367 (556)
Q Consensus 358 ~~~~~~~~~~ 367 (556)
++++.++..+
T Consensus 181 ~~v~~Ll~~~ 190 (192)
T 2rfm_A 181 EVIKIFTEVR 190 (192)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhcc
Confidence 9888877653
No 61
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=1.6e-26 Score=202.22 Aligned_cols=156 Identities=21% Similarity=0.239 Sum_probs=119.7
Q ss_pred CCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhH
Q 045083 203 EQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLH 282 (556)
Q Consensus 203 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh 282 (556)
.|.||||.|+..|+.+++++|++.+.+ .+..|..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~ 74 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENV-INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD------PQLLGKGRESALS 74 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTCCCHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCC-cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC------CCCcCCCCCcHHH
Confidence 467777777777777777777777766 366777788888888888888888888877653 4556677788888
Q ss_pred HHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCChhHHHH
Q 045083 283 EAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVYTYPTDILER 362 (556)
Q Consensus 283 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~ 362 (556)
+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.++++.
T Consensus 75 ~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ 153 (167)
T 3v31_A 75 LACSKGYTDIVKMLLDCGVDVN-EYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQV 153 (167)
T ss_dssp HHHHHTCHHHHHHHHHHTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCC-cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 8888888888888888877765 667778888888888888888888888888888888888888888888887777766
Q ss_pred HHHh
Q 045083 363 VLIV 366 (556)
Q Consensus 363 ~~~~ 366 (556)
++..
T Consensus 154 L~~~ 157 (167)
T 3v31_A 154 IESH 157 (167)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 62
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=4.9e-27 Score=206.58 Aligned_cols=170 Identities=21% Similarity=0.235 Sum_probs=149.1
Q ss_pred CCcHhHHHHhcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHH
Q 045083 131 QNTPLHEAVRLRSVDVVKILIKADPHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHE 210 (556)
Q Consensus 131 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~ 210 (556)
+.||||.|+..|+.+++++|++.++......+..|.||||+|+..|+.+++++|++++.+... .+..|.||||.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~ 75 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHI------LAKERESALSL 75 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC------CCTTCCCHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchh------hcccCCCHHHH
Confidence 578999999999999999999999886668899999999999999999999999999876433 78899999999
Q ss_pred HHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCH
Q 045083 211 AVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSV 290 (556)
Q Consensus 211 A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~ 290 (556)
|+..|+.+++++|++.+.++ +..|.+|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.
T Consensus 76 A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------~~~~~~~g~t~l~~A~~~~~~ 148 (172)
T 3v30_A 76 ASTGGYTDIVGLLLERDVDI-NIYDWNGGTPLLYAVRGNHVKCVEALLARGAD------LTTEADSGYTPMDLAVALGYR 148 (172)
T ss_dssp HHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHHTCH
T ss_pred HHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------ccccCCCCCCHHHHHHHhCcH
Confidence 99999999999999999985 78899999999999999999999999999874 567889999999999999999
Q ss_pred HHHHHHHhcCCCCCccccCCCCCH
Q 045083 291 DVAKILIEADPHVPYSANRNSETP 314 (556)
Q Consensus 291 ~~v~~Ll~~~~~~~~~~~~~g~t~ 314 (556)
+++++|++++++.. ..+..|.||
T Consensus 149 ~~~~~L~~~~~~~~-~~~~~~~~p 171 (172)
T 3v30_A 149 KVQQVIENHILKLF-QSNLVPADP 171 (172)
T ss_dssp HHHHHHHHHHHHHS-CC-------
T ss_pred HHHHHHHHHHHHHh-cccCCCCCC
Confidence 99999999998865 556666665
No 63
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.95 E-value=1.8e-30 Score=255.22 Aligned_cols=270 Identities=14% Similarity=0.166 Sum_probs=184.1
Q ss_pred HHHHHHh-cCCchHHHHhhhhhcccccccCCCCeeEEeeeccccccccccccccccchHHHHHHHHhhCcc--ccccccC
Q 045083 4 KLYEAAA-KGDIEPFREIARDELESIVTDVMKNTVLHVNIMRSHLTLQTEEGEISSESTEFVEQILDLCPS--LLFQANA 80 (556)
Q Consensus 4 ~L~~A~~-~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~ 80 (556)
.+++|.. .++.+.+++++++|.+. +||||+|+..|+. +++++| ++.+.. .....+.
T Consensus 68 ~~~~a~~~~~~~~~~~~l~~~g~~~-------~T~Lh~Aa~~G~~-----------e~v~~L---l~~ga~~~~~~~~~~ 126 (376)
T 2aja_A 68 CLYYAHYNRNAKQLWSDAHKKGIKS-------EVICFVAAITGCS-----------SALDTL---CLLLTSDEIVKVIQA 126 (376)
T ss_dssp HHHHHHTTTTCTTHHHHHHHHTCCH-------HHHHHHHHHHCCH-----------HHHHHH---TTC--CCSSCC--CH
T ss_pred HHHHHHhcCCCHHHHHHHHHcCCCc-------CCHHHHHHHcCCH-----------HHHHHH---HHcCCcHHHHHHhcc
Confidence 3556666 58889999999887654 4999999999999 999999 444331 1224456
Q ss_pred CCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCCcc-
Q 045083 81 KGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHVSY- 159 (556)
Q Consensus 81 ~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~- 159 (556)
.|.||||+||..|+.++|++|+++|++... .+..+.+ .||||+|+..|+.+++++|+++|+++..
T Consensus 127 ~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~-------------~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~ 192 (376)
T 2aja_A 127 ENYQAFRLAAENGHLHVLNRLCELAPTEIM-------------AMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATA 192 (376)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHSCTTTHH-------------HHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCccc-------------cccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchh
Confidence 788999999999999999999999864210 1112222 9999999999999999999999998762
Q ss_pred cccCCCCcHHHHHH-HcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCC
Q 045083 160 SANRNSETLLYMAV-ANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNS 238 (556)
Q Consensus 160 ~~~~~g~t~L~~A~-~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g 238 (556)
..|..|.||||+|+ ..|+.+++++|++++. .|.||||.|+..|+.+++++|++++++. +..+
T Consensus 193 ~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------------~~~taL~~Aa~~g~~evv~lL~~~ga~~-~~~~--- 255 (376)
T 2aja_A 193 MIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------------MLAYAEIHEFEYGEKYVNPFIARHVNRL-KEMH--- 255 (376)
T ss_dssp HHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------------HHHHHHHCTTTTTTTTHHHHHHHHHHHH-HHHH---
T ss_pred ccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------------ccchHHHHHHHCCCHHHHHHHHhcCccc-cccc---
Confidence 26778999999999 9999999999998541 2789999999999999999999987653 2221
Q ss_pred CCHHHHHHHcCCHH------------HHHHHHHcCChhHH---HHHh-----------hhcCCCCCchhHHHHhcCCHHH
Q 045083 239 ETPLYMAVANGSAE------------IVAEILQNCPESAA---RQML-----------EKTNEEQNTPLHEAVRLRSVDV 292 (556)
Q Consensus 239 ~t~L~~A~~~g~~~------------~v~~Ll~~~~~~~~---~~~~-----------~~~~~~g~t~Lh~A~~~g~~~~ 292 (556)
++++.|+.+|+.+ +++.|+..+..... +..+ ......+.||||+|+..|+.++
T Consensus 256 -~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~ 334 (376)
T 2aja_A 256 -DAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGA 334 (376)
T ss_dssp -TTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTH
T ss_pred -HHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHH
Confidence 2455555555544 23344444322110 0000 1223457789999999999999
Q ss_pred HHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHH
Q 045083 293 AKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKI 330 (556)
Q Consensus 293 v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 330 (556)
+++|++.+ ..++..++|++.+|-..|+.++.+.-
T Consensus 335 v~lLl~~~----~v~~~~~~~~~~~~~~~~~~~~~~~~ 368 (376)
T 2aja_A 335 CALLLSIP----SVLALTKANNYYINETGGRLDLRAVA 368 (376)
T ss_dssp HHHHTTSH----HHHHSCC-------------------
T ss_pred HHHHHcCh----HHHHHHHHhccccccccccccHHHHH
Confidence 99999865 35678899999999999999887653
No 64
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=6.2e-27 Score=203.73 Aligned_cols=156 Identities=19% Similarity=0.190 Sum_probs=87.3
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHH
Q 045083 166 ETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMA 245 (556)
Q Consensus 166 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A 245 (556)
.+|||.|+..|+.+++++|++++.+.. ..+..|.||||.|+. |+.+++++|++.+.+. +.++..|.||||+|
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~~~~~~------~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A 77 (162)
T 1ihb_A 6 GNELASAAARGDLEQLTSLLQNNVNVN------AQNGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDA 77 (162)
T ss_dssp HHHHHHHHHHTCHHHHHHHTTSCCCTT------CCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred hhHHHHHHHcCCHHHHHHHHhCCCCcc------ccCccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHH
Confidence 344444444444444444444443321 134455555555555 5555555555555442 44555566666666
Q ss_pred HHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHH
Q 045083 246 VANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVK 325 (556)
Q Consensus 246 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 325 (556)
+..|+.+++++|++.+.+ ++.+|..|+||||+|+..|+.+++++|+++|++..+.+|..|+||||+|+.+|+.+
T Consensus 78 ~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~ 151 (162)
T 1ihb_A 78 ARAGFLDTLQTLLEFQAD------VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNE 151 (162)
T ss_dssp HHHTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHcCCHHHHHHHHHcCCC------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHH
Confidence 666666666666665542 34555666666666666666666666666666543455666666666666666666
Q ss_pred HHHHHHhcCC
Q 045083 326 IVAKILQKCP 335 (556)
Q Consensus 326 ~v~~Ll~~~~ 335 (556)
++++|+++|+
T Consensus 152 ~~~~Ll~~GA 161 (162)
T 1ihb_A 152 VVSLMQANGA 161 (162)
T ss_dssp HHHHHHHTC-
T ss_pred HHHHHHHhCC
Confidence 6666666655
No 65
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=5.1e-27 Score=204.29 Aligned_cols=156 Identities=19% Similarity=0.191 Sum_probs=80.6
Q ss_pred CChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCCcccc
Q 045083 82 GDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHVSYSA 161 (556)
Q Consensus 82 g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~ 161 (556)
..||||.|+..|+.+++++|++.+.+ ++..|..|.||||+|+. |+.+++++|++.+.+++ ..
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~----------------~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~-~~ 66 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVN----------------VNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPD-LK 66 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCC----------------TTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTT-CC
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCC----------------ccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCC-CC
Confidence 34566666666666666666655443 23345556666666555 66666666666555554 44
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCH
Q 045083 162 NRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETP 241 (556)
Q Consensus 162 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~ 241 (556)
+..|.||||+|+..|+.+++++|++++.+.. ..+..|.||||.|+..|+.+++++|++.+++..+..+..|.||
T Consensus 67 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~ 140 (162)
T 1ihb_A 67 DRTGFAVIHDAARAGFLDTLQTLLEFQADVN------IEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTA 140 (162)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT------CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC------CcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcH
Confidence 4555555555555555555555555543321 1344445555555555555555555554444334444444444
Q ss_pred HHHHHHcCCHHHHHHHHHcC
Q 045083 242 LYMAVANGSAEIVAEILQNC 261 (556)
Q Consensus 242 L~~A~~~g~~~~v~~Ll~~~ 261 (556)
||+|+..|+.+++++|+++|
T Consensus 141 l~~A~~~~~~~~~~~Ll~~G 160 (162)
T 1ihb_A 141 CDLARLYGRNEVVSLMQANG 160 (162)
T ss_dssp HHHHHHTTCHHHHHHHHHTC
T ss_pred HHHHHHcCCHHHHHHHHHhC
Confidence 44444444444444444443
No 66
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=1.6e-26 Score=202.16 Aligned_cols=157 Identities=23% Similarity=0.246 Sum_probs=115.4
Q ss_pred CCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCCccc
Q 045083 81 KGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHVSYS 160 (556)
Q Consensus 81 ~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~ 160 (556)
.|.||||.|+..|+.+++++|++.+.+ ++..|..|.||||+|+..|+.+++++|++.+.+++ .
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~----------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~ 64 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENV----------------INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQ-L 64 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSC----------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-C
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCC----------------cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-C
Confidence 467888888888888888888877655 45567778888888888888888888888877766 5
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCC
Q 045083 161 ANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSET 240 (556)
Q Consensus 161 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t 240 (556)
.+..|.||||+|+..|+.+++++|++++.+.. ..+..|.||||.|+..|+.+++++|++.+.+. +..|.+|.|
T Consensus 65 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t 137 (167)
T 3v31_A 65 LGKGRESALSLACSKGYTDIVKMLLDCGVDVN------EYDWNGGTPLLYAVHGNHVKCVKMLLESGADP-TIETDSGYN 137 (167)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCC
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC------cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCC
Confidence 66777777777777777777777777765532 25666777777777777777777777776663 556667777
Q ss_pred HHHHHHHcCCHHHHHHHHHcC
Q 045083 241 PLYMAVANGSAEIVAEILQNC 261 (556)
Q Consensus 241 ~L~~A~~~g~~~~v~~Ll~~~ 261 (556)
|||+|+..|+.+++++|++++
T Consensus 138 ~l~~A~~~~~~~~~~~L~~~~ 158 (167)
T 3v31_A 138 SMDLAVALGYRSVQQVIESHL 158 (167)
T ss_dssp HHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHcCcHHHHHHHHHHH
Confidence 777777777777777776665
No 67
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=1.6e-26 Score=202.58 Aligned_cols=157 Identities=24% Similarity=0.360 Sum_probs=89.0
Q ss_pred cCCCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCCc
Q 045083 79 NAKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHVS 158 (556)
Q Consensus 79 ~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~ 158 (556)
...+.+|||.|++.|+.++|++|++++.+ ++.+|..|.||||+|+..|+.+++++|++++.+++
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~----------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 74 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGAD----------------VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVN 74 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCC----------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCC----------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 34455666666666666666666666554 34455666666666666666666666666666554
Q ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCC
Q 045083 159 YSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNS 238 (556)
Q Consensus 159 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g 238 (556)
..+..|.||||+|+..|+.+++++|++++.+.. ..+..|.||||.|+..|+.+++++|++++.+. +.+|..|
T Consensus 75 -~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g 146 (169)
T 2y1l_E 75 -AVDHAGMTPLRLAALFGHLEIVEVLLKNGADVN------ANDMEGHTPLHLAAMFGHLEIVEVLLKNGADV-NAQDKFG 146 (169)
T ss_dssp -CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTS
T ss_pred -ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCC
Confidence 445556666666666666666666665554322 14445555555555555555555555555542 4445555
Q ss_pred CCHHHHHHHcCCHHHHHHHHH
Q 045083 239 ETPLYMAVANGSAEIVAEILQ 259 (556)
Q Consensus 239 ~t~L~~A~~~g~~~~v~~Ll~ 259 (556)
.||||+|+..|+.+++++|++
T Consensus 147 ~t~l~~A~~~~~~~~~~~L~~ 167 (169)
T 2y1l_E 147 KTAFDISIDNGNEDLAEILQK 167 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHT
T ss_pred CCHHHHHHHhCCHHHHHHHHH
Confidence 555555555555555555544
No 68
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=2.2e-26 Score=198.11 Aligned_cols=150 Identities=19% Similarity=0.237 Sum_probs=115.3
Q ss_pred CcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHH
Q 045083 205 NTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEA 284 (556)
Q Consensus 205 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A 284 (556)
.++||.|+..|+.+++++|++.+++. ..+..|.||||+|+..|+.+++++|++.+.+ ++.++..|+||||+|
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A 74 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPF--TTDWLGTSPLHLAAQYGHFSTTEVLLRAGVS------RDARTKVDRTPLHMA 74 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCC--CCCTTCCCHHHHHHHHTCHHHHHHHHTTTCC------TTCCCTTCCCHHHHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCC--CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCCCCCCCCCHHHHH
Confidence 46777777777777777777777664 2567777888888888888888888877653 456677788888888
Q ss_pred HhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCChhHHHHH
Q 045083 285 VRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVYTYPTDILERV 363 (556)
Q Consensus 285 ~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~~ 363 (556)
+..|+.+++++|+++|++++ .+|..|+||||+|+.+|+.+++++|+++|++++.+|..|+||||+|+..++.++++.+
T Consensus 75 ~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 75 ASEGHANIVEVLLKHGADVN-AKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHTCHHHHHHHHTTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHcChHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 88888888888888887765 6677788888888888888888888888888888888888888888888777766543
No 69
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=2.8e-26 Score=200.97 Aligned_cols=156 Identities=27% Similarity=0.376 Sum_probs=105.0
Q ss_pred CCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCch
Q 045083 201 NEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTP 280 (556)
Q Consensus 201 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~ 280 (556)
...+.++|+.|+..|+.+++++|++.+.++ +..|.+|.||||+|+..|+.+++++|++.+.+ ++..|..|.||
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~ 83 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADV-NAEDASGWTPLHLAAFNGHLEIVEVLLKNGAD------VNAVDHAGMTP 83 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCccCCCCCCH
Confidence 444556677777777777777777666663 55666677777777777777777777766653 34556667777
Q ss_pred hHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCChhHH
Q 045083 281 LHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVYTYPTDIL 360 (556)
Q Consensus 281 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~~~~~~~~ 360 (556)
||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++
T Consensus 84 L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~ 162 (169)
T 2y1l_E 84 LRLAALFGHLEIVEVLLKNGADVN-ANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLA 162 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHH
Confidence 777777777777777777776654 5566677777777777777777777777777777777777777777777766666
Q ss_pred HHHH
Q 045083 361 ERVL 364 (556)
Q Consensus 361 ~~~~ 364 (556)
+.++
T Consensus 163 ~~L~ 166 (169)
T 2y1l_E 163 EILQ 166 (169)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 70
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=1.8e-26 Score=201.44 Aligned_cols=157 Identities=27% Similarity=0.322 Sum_probs=125.6
Q ss_pred cCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCc
Q 045083 200 TNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNT 279 (556)
Q Consensus 200 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t 279 (556)
.+..|.++||.|+..|+.++++.|++.++......+..|.||||+|+..|+.+++++|++.+.+ ++.+|..|+|
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t 77 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD------VHAKDKGGLV 77 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCC
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCC------CCccCCCCCC
Confidence 4566778888888888888888888766655667777788888888888888888888888764 4667778888
Q ss_pred hhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCChhH
Q 045083 280 PLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVYTYPTDI 359 (556)
Q Consensus 280 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~~~~~~~ 359 (556)
|||+|+..|+.+++++|+++|++++ .+|..|+||||+|+.+|+.+++++|+++|++++.+|..|+||||+|.. ++.++
T Consensus 78 ~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i 155 (165)
T 3twr_A 78 PLHNACSYGHYEVAELLVKHGAVVN-VADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDI 155 (165)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHH
T ss_pred HHHHHHHcCcHHHHHHHHhCCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHH
Confidence 8888888888888888888888875 667888888888888888888888888888888888888888888766 66677
Q ss_pred HHHHH
Q 045083 360 LERVL 364 (556)
Q Consensus 360 ~~~~~ 364 (556)
++.++
T Consensus 156 ~~~L~ 160 (165)
T 3twr_A 156 QDLLR 160 (165)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 76664
No 71
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=3.6e-26 Score=202.39 Aligned_cols=165 Identities=25% Similarity=0.291 Sum_probs=89.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHH
Q 045083 165 SETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYM 244 (556)
Q Consensus 165 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~ 244 (556)
+.++|+.|+..|+.+++++|++.++... +..+..|.||||.|+..|+.+++++|++.+.++ +..|.+|.||||+
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~-----~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~ 78 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTENDL-----NQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHL 78 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTSCT-----TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCcccc-----cccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHH
Confidence 3444555555555555555554432221 114445555555555555555555555555542 4455555566666
Q ss_pred HHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCH
Q 045083 245 AVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSV 324 (556)
Q Consensus 245 A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~ 324 (556)
|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..++.
T Consensus 79 A~~~~~~~~v~~Ll~~g~~------~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~tpl~~A~~~~~~ 151 (179)
T 3f6q_A 79 AASHGHRDIVQKLLQYKAD------INAVNEHGNVPLHYACFWGQDQVAEDLVANGALVS-ICNKYGEMPVDKAKAPLRE 151 (179)
T ss_dssp HHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSS-BCCTTSCCGGGGSCHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCC------CCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcc-hhccCCCCcHHHHHHHHHH
Confidence 6666666666666655542 34455556666666666666666666666665553 4555666666666666666
Q ss_pred HHHHHHHhcCCCCCCCCC
Q 045083 325 KIVAKILQKCPSPAHEGP 342 (556)
Q Consensus 325 ~~v~~Ll~~~~~~~~~d~ 342 (556)
+++++|++.|++++..+.
T Consensus 152 ~~~~~L~~~g~~~~~~~~ 169 (179)
T 3f6q_A 152 LLRERAEKMGQNLNRIPY 169 (179)
T ss_dssp HHHHHHHHTTCCCSCBCC
T ss_pred HHHHHHHHhhcCcccCCc
Confidence 666666666666554443
No 72
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=5.5e-26 Score=201.19 Aligned_cols=161 Identities=16% Similarity=0.198 Sum_probs=146.3
Q ss_pred CCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchh
Q 045083 202 EEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPL 281 (556)
Q Consensus 202 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L 281 (556)
..+.++||.|+..|+.+++++|++.++...+..+..|+||||+|+..|+.+++++|++.+.+ ++.+|..|.|||
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L 76 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR------INVMNRGDDTPL 76 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTCCCHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC------CCCcCCCCCCHH
Confidence 46789999999999999999999997776788999999999999999999999999999874 567889999999
Q ss_pred HHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCChhHHH
Q 045083 282 HEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVYTYPTDILE 361 (556)
Q Consensus 282 h~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~ 361 (556)
|+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..+..++++
T Consensus 77 ~~A~~~~~~~~v~~Ll~~g~~~~-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~ 155 (179)
T 3f6q_A 77 HLAASHGHRDIVQKLLQYKADIN-AVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRE 155 (179)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999986 77999999999999999999999999999999999999999999999988888888
Q ss_pred HHHHhhCC
Q 045083 362 RVLIVRGT 369 (556)
Q Consensus 362 ~~~~~~~~ 369 (556)
.++..+..
T Consensus 156 ~L~~~g~~ 163 (179)
T 3f6q_A 156 RAEKMGQN 163 (179)
T ss_dssp HHHHTTCC
T ss_pred HHHHhhcC
Confidence 77765544
No 73
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=1.2e-25 Score=193.47 Aligned_cols=150 Identities=22% Similarity=0.306 Sum_probs=106.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHH
Q 045083 166 ETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMA 245 (556)
Q Consensus 166 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A 245 (556)
.+||+.|+..|+.+++++|++.+.+.. .+..|.||||.|+..|+.+++++|++.+.+. +..+..|+||||+|
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A 74 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT-------TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMA 74 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC-------CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC-------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHH
Confidence 356666666666666666666654321 4556667777777777777777777666663 56677777777777
Q ss_pred HHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHH
Q 045083 246 VANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVK 325 (556)
Q Consensus 246 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 325 (556)
+..|+.+++++|++.+.+ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+.+|+.+
T Consensus 75 ~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~~~~~~ 147 (153)
T 1awc_B 75 ASEGHANIVEVLLKHGAD------VNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH-TQSKFCKTAFDISIDNGNED 147 (153)
T ss_dssp HHHTCHHHHHHHHTTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHH
T ss_pred HHcChHHHHHHHHHcCCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHHcCCHH
Confidence 777777777777777653 45667778888888888888888888888887765 66778888888888888888
Q ss_pred HHHHH
Q 045083 326 IVAKI 330 (556)
Q Consensus 326 ~v~~L 330 (556)
++++|
T Consensus 148 i~~~L 152 (153)
T 1awc_B 148 LAEIL 152 (153)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87764
No 74
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=3e-29 Score=230.85 Aligned_cols=180 Identities=21% Similarity=0.198 Sum_probs=89.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHH
Q 045083 165 SETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYM 244 (556)
Q Consensus 165 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~ 244 (556)
+.||||.|+..|+.+++++|++.+.+.. ..+..|.||||.|+..|+.+++++|++.+.++ +..|.+|+||||+
T Consensus 21 ~~t~L~~A~~~g~~~~v~~Ll~~g~~~~------~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-n~~d~~g~tpLh~ 93 (229)
T 2vge_A 21 PLVLLLDAALTGELEVVQQAVKEMNDPS------QPNEEGITALHNAICGANYSIVDFLITAGANV-NSPDSHGWTPLHC 93 (229)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHSSCTT------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHH
T ss_pred hhHHHHHHHHcCCHHHHHHHHhcCCCCC------CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHH
Confidence 3344444444444444444444433221 13444445555555555555555555544442 4445555555555
Q ss_pred HHHcCCHHHHHHHHHcCChhHHHHHhhhcC-CCCCchhHHH--HhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHc
Q 045083 245 AVANGSAEIVAEILQNCPESAARQMLEKTN-EEQNTPLHEA--VRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAAN 321 (556)
Q Consensus 245 A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~-~~g~t~Lh~A--~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~ 321 (556)
|+..|+.+++++|++.+.+ ++..+ ..|+||||+| +..|+.+++++|++.|++++ ..|..|.|+++.++..
T Consensus 94 A~~~g~~~~v~~Ll~~ga~------~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~-~~~~~~~~~l~~~~~~ 166 (229)
T 2vge_A 94 AASCNDTVICMALVQHGAA------IFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMG-LMNSGAVYALWDYSAE 166 (229)
T ss_dssp HHHTTCHHHHHHHHTTTCC------TTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTT-TSGGGEEEESSCBCCS
T ss_pred HHHcCCHHHHHHHHHcCCC------cccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcc-cccCCchHHHHHHhhc
Confidence 5555555555555555442 22332 3555555555 55555555555555555543 3445555555543333
Q ss_pred CCHHHHHHHHhcCCC--CCCCCCCCCcHHHHHHhcCChhHHH
Q 045083 322 GSVKIVAKILQKCPS--PAHEGPDGKTALHAAVYTYPTDILE 361 (556)
Q Consensus 322 ~~~~~v~~Ll~~~~~--~~~~d~~g~t~L~~A~~~~~~~~~~ 361 (556)
+.. +.|+..|++ ++.+|..|+||||+|+..|+.++++
T Consensus 167 ~~~---~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~ 205 (229)
T 2vge_A 167 FGD---ELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVP 205 (229)
T ss_dssp STT---BCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEE
T ss_pred ccc---ccCccccccccccccCCCcccHHHHHHHcCCcceee
Confidence 222 344555555 4556666666666666666555543
No 75
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=1.2e-25 Score=194.28 Aligned_cols=151 Identities=22% Similarity=0.311 Sum_probs=94.0
Q ss_pred CcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHH
Q 045083 205 NTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEA 284 (556)
Q Consensus 205 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A 284 (556)
.||||.|+..|+.++++.|++......+..+..|.||||+ +..|+.+++++|++.+.+ ++.+|..|.||||+|
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A 75 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGAS------PNVQDTSGTSPVHDA 75 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHH
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC------CCCcCCCCCCHHHHH
Confidence 3566666666666666666665322345556666666666 666666666666666543 345556666666666
Q ss_pred HhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCChhHHHHHH
Q 045083 285 VRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVYTYPTDILERVL 364 (556)
Q Consensus 285 ~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~~~ 364 (556)
+..|+.+++++|+++|++++ .+|..|+||||+|+.+|+.+++++|++. ++++.+|..|+||||+|+..++.++++.++
T Consensus 76 ~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll 153 (156)
T 1bd8_A 76 ARTGFLDTLKVLVEHGADVN-VPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQ 153 (156)
T ss_dssp HHTTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHH
T ss_pred HHcCcHHHHHHHHHcCCCCC-CcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 66666666666666666654 4566666666666666666666666666 666666666666666666666666665554
No 76
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.93 E-value=6.8e-26 Score=197.74 Aligned_cols=160 Identities=26% Similarity=0.300 Sum_probs=87.5
Q ss_pred hccCCCcHhHHHHhcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCc
Q 045083 127 TNEEQNTPLHEAVRLRSVDVVKILIKADPHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNT 206 (556)
Q Consensus 127 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t 206 (556)
.|.+|.||||.|++.|+.++++.|++.++......+..|.||||+|+..|+.+++++|++++.+.. ..+..|.|
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------~~~~~g~t 77 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVH------AKDKGGLV 77 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT------CCCTTSCC
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCC------ccCCCCCC
Confidence 355666777777777777777777765443333445556666666666666666666666554422 14555555
Q ss_pred HhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHh
Q 045083 207 PLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVR 286 (556)
Q Consensus 207 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~ 286 (556)
|||.|+..|+.+++++|++.+.+. +..|..|+||||+|+..|+.+++++|++.+.+ ++.+|..|+||||+|+.
T Consensus 78 ~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------~~~~~~~g~t~l~~a~~ 150 (165)
T 3twr_A 78 PLHNACSYGHYEVAELLVKHGAVV-NVADLWKFTPLHEAAAKGKYEICKLLLQHGAD------PTKKNRDGNTPLDLVKD 150 (165)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCTGGGSCT
T ss_pred HHHHHHHcCcHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CcccCCCCCChhHhHhc
Confidence 555555555555555555555553 44455555555555555555555555555442 23444555555555443
Q ss_pred cCCHHHHHHHHhcC
Q 045083 287 LRSVDVAKILIEAD 300 (556)
Q Consensus 287 ~g~~~~v~~Ll~~~ 300 (556)
|+.+++++|+++|
T Consensus 151 -~~~~i~~~L~~~g 163 (165)
T 3twr_A 151 -GDTDIQDLLRGDA 163 (165)
T ss_dssp -TCHHHHHHHHTC-
T ss_pred -CChHHHHHHhhcc
Confidence 4555555555443
No 77
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.93 E-value=4.3e-29 Score=229.85 Aligned_cols=145 Identities=23% Similarity=0.179 Sum_probs=80.6
Q ss_pred cccCCCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCC
Q 045083 77 QANAKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPH 156 (556)
Q Consensus 77 ~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~ 156 (556)
..+.+|.||||+|+..|+.++|++|++.|.+ ++.+|..|.||||+|+..|+.+++++|++.|++
T Consensus 16 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~----------------~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 79 (229)
T 2vge_A 16 RARLNPLVLLLDAALTGELEVVQQAVKEMND----------------PSQPNEEGITALHNAICGANYSIVDFLITAGAN 79 (229)
T ss_dssp CTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC----------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred ccccchhHHHHHHHHcCCHHHHHHHHhcCCC----------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 3445555666666666666666666666554 344556666666666666666666666666666
Q ss_pred CcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHH--HhcCCHHHHHHHHhcCCCCCccC
Q 045083 157 VSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEA--VRLRRVDVVKILIKADPHVPYSA 234 (556)
Q Consensus 157 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~~~~~~~~~ 234 (556)
++ ..|..|.||||+|+..|+.+++++|++++.+.... .+..|.||||+| +..|+.+++++|++.+++. +..
T Consensus 80 ~n-~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~-----~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~-~~~ 152 (229)
T 2vge_A 80 VN-SPDSHGWTPLHCAASCNDTVICMALVQHGAAIFAT-----TLSDGATAFEKCDPYREGYADCATYLADVEQSM-GLM 152 (229)
T ss_dssp TT-CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCC-----CSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHT-TTS
T ss_pred CC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-----cCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCc-ccc
Confidence 54 44555566666666666666666665555443221 123555555555 5555555555555555442 334
Q ss_pred CCCCCCHHHH
Q 045083 235 NRNSETPLYM 244 (556)
Q Consensus 235 ~~~g~t~L~~ 244 (556)
|..|.+|++.
T Consensus 153 ~~~~~~~l~~ 162 (229)
T 2vge_A 153 NSGAVYALWD 162 (229)
T ss_dssp GGGEEEESSC
T ss_pred cCCchHHHHH
Confidence 4444444443
No 78
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=2.8e-25 Score=191.86 Aligned_cols=153 Identities=18% Similarity=0.189 Sum_probs=105.1
Q ss_pred CChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCCcccc
Q 045083 82 GDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHVSYSA 161 (556)
Q Consensus 82 g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~ 161 (556)
+.||||.|+..|+.+++++|++. ...+ ++..|..|.||||+ +..|+.+++++|++.|.+++ ..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~-~~~~--------------~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~-~~ 64 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHR-ELVH--------------PDALNRFGKTALQV-MMFGSTAIALELLKQGASPN-VQ 64 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-TCCC--------------TTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTT-CC
T ss_pred cchHHHHHHHhCCHHHHHHHHHh-hCcC--------------ccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCC-Cc
Confidence 45788888888888888888876 2111 34567778888888 77788888888888777765 56
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCH
Q 045083 162 NRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETP 241 (556)
Q Consensus 162 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~ 241 (556)
|..|.||||+|+..|+.+++++|++++.+... .+..|.||||.|+..|+.+++++|++. .+ .+..|.+|.||
T Consensus 65 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~-~~~~~~~g~t~ 136 (156)
T 1bd8_A 65 DTSGTSPVHDAARTGFLDTLKVLVEHGADVNV------PDGTGALPIHLAVQEGHTAVVSFLAAE-SD-LHRRDARGLTP 136 (156)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC------CCTTSCCHHHHHHHHTCHHHHHHHHTT-SC-TTCCCTTSCCH
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCC------cCCCCCcHHHHHHHhChHHHHHHHHhc-cC-CCCcCCCCCCH
Confidence 66777777777777777777777776654322 556666777777777777777776666 44 35566666666
Q ss_pred HHHHHHcCCHHHHHHHHH
Q 045083 242 LYMAVANGSAEIVAEILQ 259 (556)
Q Consensus 242 L~~A~~~g~~~~v~~Ll~ 259 (556)
||+|+..|+.+++++|++
T Consensus 137 l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 137 LELALQRGAQDLVDILQG 154 (156)
T ss_dssp HHHHHHSCCHHHHHHHHT
T ss_pred HHHHHHcCcHHHHHHHHh
Confidence 666666666666666664
No 79
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.92 E-value=2.4e-26 Score=213.48 Aligned_cols=179 Identities=17% Similarity=0.094 Sum_probs=122.7
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHH
Q 045083 163 RNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPL 242 (556)
Q Consensus 163 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L 242 (556)
..|+||||.|+..|+.+.++.|++++.+.. .+..|.||||.|+..|+.+++++|++.+++ .+..|.+|.|||
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~-------~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L 74 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVK-------FNPLPLALLLDSSLEGEFDLVQRIIYEVDD-PSLPNDEGITAL 74 (239)
T ss_dssp -----------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS-CCCCCTTSCCHH
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcc-------cCchhhHHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHH
Confidence 457888888888888888888888775543 346778889999999999999999988886 477888999999
Q ss_pred HHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCC-CHHHHH--H
Q 045083 243 YMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSE-TPLYMA--A 319 (556)
Q Consensus 243 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~-t~L~~A--~ 319 (556)
|+|+..|+.+++++|++++.+ ++.+|..|+||||+|+..|+.+++++|+++|++++ ..+..|. ||||+| +
T Consensus 75 ~~A~~~g~~~~v~~Ll~~ga~------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~~~~t~l~~a~~~ 147 (239)
T 1ycs_B 75 HNAVCAGHTEIVKFLVQFGVN------VNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVF-AMTYSDMQTAADKCEEM 147 (239)
T ss_dssp HHHHHHTCHHHHHHHHHHTCC------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCSSSCCCHHHHCCSS
T ss_pred HHHHHcCCHHHHHHHHHcCCC------CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-eecCCCCcchHHHHHHh
Confidence 999999999999999998874 57788899999999999999999999999999986 5555555 999999 7
Q ss_pred HcCCHHHHHHHHhcCCCCCCC---------CCCCCcHHHHHHhcCC
Q 045083 320 ANGSVKIVAKILQKCPSPAHE---------GPDGKTALHAAVYTYP 356 (556)
Q Consensus 320 ~~~~~~~v~~Ll~~~~~~~~~---------d~~g~t~L~~A~~~~~ 356 (556)
..|+.+++++|+..+++++.. |..+.++++++...|.
T Consensus 148 ~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 148 EEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp STTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred hhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 888999999999988887765 5667788887766554
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.91 E-value=2.2e-25 Score=206.95 Aligned_cols=159 Identities=21% Similarity=0.163 Sum_probs=96.5
Q ss_pred cCCCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCCc
Q 045083 79 NAKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHVS 158 (556)
Q Consensus 79 ~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~ 158 (556)
+..|.||||.|++.|+.+.++.|+++|++. + .+..|.||||.|+..|+.+++++|++.+++++
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~----------------~-~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~ 64 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRV----------------K-FNPLPLALLLDSSLEGEFDLVQRIIYEVDDPS 64 (239)
T ss_dssp ----------------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCC
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCc----------------c-cCchhhHHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 346788888888888888888888888763 2 23567888888888888888888888888776
Q ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCC
Q 045083 159 YSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNS 238 (556)
Q Consensus 159 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g 238 (556)
..|..|.||||+|+..|+.+++++|++++.+.. ..+..|.||||+|+..|+.+++++|+++++++ +..+..|
T Consensus 65 -~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~------~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~ 136 (239)
T 1ycs_B 65 -LPNDEGITALHNAVCAGHTEIVKFLVQFGVNVN------AADSDGWTPLHCAASCNNVQVCKFLVESGAAV-FAMTYSD 136 (239)
T ss_dssp -CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTT------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCSSS
T ss_pred -CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-ceecCCC
Confidence 667788888888888888888888888876533 26777888888888888888888888888775 4455444
Q ss_pred C-CHHHHH--HHcCCHHHHHHHHHcCC
Q 045083 239 E-TPLYMA--VANGSAEIVAEILQNCP 262 (556)
Q Consensus 239 ~-t~L~~A--~~~g~~~~v~~Ll~~~~ 262 (556)
. ||||+| +..|+.+++++|++.+.
T Consensus 137 ~~t~l~~a~~~~~g~~~~~~~Ll~~~a 163 (239)
T 1ycs_B 137 MQTAADKCEEMEEGYTQCSQFLYGVQE 163 (239)
T ss_dssp CCCHHHHCCSSSTTCCCHHHHHHHHHH
T ss_pred CcchHHHHHHhhhccHHHHHHHHHhhh
Confidence 4 888877 66777888888877664
No 81
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.91 E-value=3.2e-24 Score=185.12 Aligned_cols=143 Identities=19% Similarity=0.215 Sum_probs=115.3
Q ss_pred cCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCc
Q 045083 200 TNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNT 279 (556)
Q Consensus 200 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t 279 (556)
.+..|.||||.|+..|+.+++++|++.+.++ +..|..|+||||+|+ .|+.+++++|++.+.+ ++.+|..|+|
T Consensus 8 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~------~~~~d~~g~t 79 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGSARVAELLLLHGAE------PNCADPATLT 79 (156)
T ss_dssp --CCSTTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC------CCCCCTTTCC
T ss_pred CCccchHHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC------CCCcCCCCCc
Confidence 6788999999999999999999999998884 788899999999985 8999999999999874 5778889999
Q ss_pred -hhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q 045083 280 -PLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAA 351 (556)
Q Consensus 280 -~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A 351 (556)
|||+|+..|+.+++++|+++|++++ .+|..|+||||+|+.+|+.+++++|+++|++++.+|..|.||.+-+
T Consensus 80 tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 80 RPVHDAAREGFLDTLVVLHRAGARLD-VRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCSS-CCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 9999999999999999999999986 7789999999999999999999999999999999999999997743
No 82
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.90 E-value=1.5e-23 Score=176.34 Aligned_cols=132 Identities=15% Similarity=0.139 Sum_probs=96.2
Q ss_pred cccccccCCCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHh
Q 045083 73 SLLFQANAKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIK 152 (556)
Q Consensus 73 ~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~ 152 (556)
..++..+..|.||||+|+..|+.+++++|++++.+ ++.+|..|.||||+|+. |+.+++++|++
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----------------~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~ 65 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGAD----------------PNALNRFGRRPIQVMMM-GSAQVAELLLL 65 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC----------------TTCCCTTCCTTTTTSTT-SCHHHHHHHHH
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCC----------------cCCcCCCCCCHHHHHHc-CCHHHHHHHHH
Confidence 34567777888888888888888888888887765 45567778888888888 88888888888
Q ss_pred cCCCCcccccCC-CCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCC
Q 045083 153 ADPHVSYSANRN-SETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADP 228 (556)
Q Consensus 153 ~~~~~~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~ 228 (556)
++++++ ..+.. |.||||+|+..|+.+++++|++++.+... .+..|.||||+|+..++.+++++|+++++
T Consensus 66 ~g~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~d~~g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 66 HGAEPN-CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDV------CDAWGRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp HTCCSS-CCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCC------CSSSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred CCCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------cCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 887776 55555 77777777777777777777777655322 56666677777777667777776666554
No 83
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.89 E-value=8.4e-23 Score=171.70 Aligned_cols=127 Identities=18% Similarity=0.156 Sum_probs=84.0
Q ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCC-
Q 045083 232 YSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRN- 310 (556)
Q Consensus 232 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~- 310 (556)
+..+..|.||||+|+..|+.+++++|++.+.+ ++.+|..|+||||+|+. |+.+++++|+++|++++ .+|..
T Consensus 6 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~-~~~~~~ 77 (136)
T 1d9s_A 6 HMLGGSSDAGLATAAARGQVETVRQLLEAGAD------PNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPN-CADPAT 77 (136)
T ss_dssp SCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSS-CCBTTT
T ss_pred cCCCCCCccHHHHHHHcCCHHHHHHHHHcCCC------cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCC-CcCCCC
Confidence 45566666666666666666666666666543 34556666677777766 66777777776666654 45555
Q ss_pred CCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCChhHHHHHHHh
Q 045083 311 SETPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVYTYPTDILERVLIV 366 (556)
Q Consensus 311 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~~~~~ 366 (556)
|+||||+|+.+|+.+++++|+++|++++.+|..|+||||+|+..++.++++.++..
T Consensus 78 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ 133 (136)
T 1d9s_A 78 LTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAA 133 (136)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 66777777777777777776666666666666777777777766666666666544
No 84
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.89 E-value=7e-24 Score=187.78 Aligned_cols=159 Identities=10% Similarity=0.093 Sum_probs=93.3
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCH----HHHHHHHhcCCCCCccCCCCCCCH
Q 045083 166 ETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRV----DVVKILIKADPHVPYSANRNSETP 241 (556)
Q Consensus 166 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~----~~v~~Ll~~~~~~~~~~~~~g~t~ 241 (556)
.++|+.|+..|+.+.++.++..+.... .+..|.||||+|+..++. +++++|+++|+++ +.+|.+|+||
T Consensus 7 ~~~l~~Aa~~g~~~~~~~l~~~~~~~~-------~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~Tp 78 (186)
T 3t8k_A 7 YRTVSAAAMLGTYEDFLELFEKGYEDK-------ESVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTL 78 (186)
T ss_dssp CSSHHHHHHHSCHHHHHHHHHHSSSCH-------HHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCT
T ss_pred ccHHHHHHHcCCHHHHHHHHhcCcccc-------cccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcH
Confidence 355666666666666666665543321 124566666666666653 3666666666663 5666666666
Q ss_pred HHHHHHcCC------HHHHHHHHHcCChhHHHHHhhhcCCCCC-chhHHHHhcC-----CHHHHHHHHh-cCCCCCcccc
Q 045083 242 LYMAVANGS------AEIVAEILQNCPESAARQMLEKTNEEQN-TPLHEAVRLR-----SVDVAKILIE-ADPHVPYSAN 308 (556)
Q Consensus 242 L~~A~~~g~------~~~v~~Ll~~~~~~~~~~~~~~~~~~g~-t~Lh~A~~~g-----~~~~v~~Ll~-~~~~~~~~~~ 308 (556)
||+|+..|+ .+++++|+++|.+ ++.+|..|+ ||||+|+..+ +.+++++|++ +|++++ .+|
T Consensus 79 Lh~a~~~~~~~~~~~~~iv~~Ll~~Gad------in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~-~~d 151 (186)
T 3t8k_A 79 FFPLFQGGGNDITGTTELCKIFLEKGAD------ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLL-IKD 151 (186)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCC------SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTT-CCC
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHCCCC------CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCc-ccC
Confidence 666666665 4556666666653 455566666 6666666633 2346666666 666654 556
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC
Q 045083 309 RNSETPLYMAAANGSVKIVAKILQKCPSPAH 339 (556)
Q Consensus 309 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~ 339 (556)
..|+||||+|++.|+.+++++|+......+.
T Consensus 152 ~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~ 182 (186)
T 3t8k_A 152 KWGLTALEFVKRCQKPIALKMMEDYIKKYNL 182 (186)
T ss_dssp TTSCCHHHHHHTTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHHHHHHhc
Confidence 6666666666666666666665544333333
No 85
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.89 E-value=1.3e-23 Score=186.11 Aligned_cols=152 Identities=12% Similarity=0.062 Sum_probs=134.4
Q ss_pred CCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCH----HHHHHHHHcCChhHHHHHhhhcCCCCCc
Q 045083 204 QNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSA----EIVAEILQNCPESAARQMLEKTNEEQNT 279 (556)
Q Consensus 204 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~----~~v~~Ll~~~~~~~~~~~~~~~~~~g~t 279 (556)
+.++|+.|++.|+.+.++.+++.+.+. ..+..|+||||+|+.+|+. +++++|++.|++ ++.+|..|+|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~--~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad------vn~~d~~g~T 77 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYED--KESVLKSNILYDVLRNNNDEARYKISMFLINKGAD------IKSRTKEGTT 77 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSC--HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCC------SSCCCTTCCC
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCccc--ccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCC------CCCCCCCCCc
Confidence 467899999999999999999887542 2237799999999999985 599999999985 6788999999
Q ss_pred hhHHHHhcCC------HHHHHHHHhcCCCCCccccCCCC-CHHHHHHHcC-----CHHHHHHHHh-cCCCCCCCCCCCCc
Q 045083 280 PLHEAVRLRS------VDVAKILIEADPHVPYSANRNSE-TPLYMAAANG-----SVKIVAKILQ-KCPSPAHEGPDGKT 346 (556)
Q Consensus 280 ~Lh~A~~~g~------~~~v~~Ll~~~~~~~~~~~~~g~-t~L~~A~~~~-----~~~~v~~Ll~-~~~~~~~~d~~g~t 346 (556)
|||+|+..|+ .+++++|+++|++++ .+|..|+ ||||+|+..+ ..+++++|++ +|++++.+|..|+|
T Consensus 78 pLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin-~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~T 156 (186)
T 3t8k_A 78 LFFPLFQGGGNDITGTTELCKIFLEKGADIT-ALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLT 156 (186)
T ss_dssp THHHHHHHCTTCHHHHHHHHHHHHHTTCCSS-SCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCC
T ss_pred HHHHHHHcCCcchhhHHHHHHHHHHCCCCCC-ccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCC
Confidence 9999999987 689999999999987 7899999 9999999954 3569999999 99999999999999
Q ss_pred HHHHHHhcCChhHHHHHH
Q 045083 347 ALHAAVYTYPTDILERVL 364 (556)
Q Consensus 347 ~L~~A~~~~~~~~~~~~~ 364 (556)
|||+|+..+..+.++.+.
T Consensus 157 pL~~A~~~~~~~~v~~L~ 174 (186)
T 3t8k_A 157 ALEFVKRCQKPIALKMME 174 (186)
T ss_dssp HHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHH
Confidence 999999999998887664
No 86
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.88 E-value=5e-23 Score=177.56 Aligned_cols=142 Identities=16% Similarity=0.132 Sum_probs=90.2
Q ss_pred cccCCCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCC
Q 045083 77 QANAKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPH 156 (556)
Q Consensus 77 ~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~ 156 (556)
..+..|.||||+|+..|+.++|++|++++.+ ++..|..|.||||+|+ .|+.+++++|+++|.+
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~----------------~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~ 69 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGAN----------------PNAPNSYGRRPIQVMM-MGSARVAELLLLHGAE 69 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCC----------------TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCC----------------CCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC
Confidence 4566777888888888888888888877665 4456777888888774 7778888888877777
Q ss_pred CcccccCCCCc-HHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCC
Q 045083 157 VSYSANRNSET-LLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSAN 235 (556)
Q Consensus 157 ~~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 235 (556)
++ ..+..|.| |||+|+..|+.+++++|++++.+... .+..|.||||+|+..|+.+++++|++++.+. +..+
T Consensus 70 ~~-~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~------~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~-~~~~ 141 (156)
T 1bi7_B 70 PN-CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDV------RDAWGRLPVDLAEELGHRDVARYLRAAAGGT-RGSN 141 (156)
T ss_dssp CC-CCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSC------CCTTCCCHHHHHHHHTCHHHHHHHSSCC--------
T ss_pred CC-CcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcc------cCCCCCCHHHHHHHhCHHHHHHHHHHcCCCC-CccC
Confidence 66 56666776 77777777777777777777655322 5666777777777777777777777776663 5566
Q ss_pred CCCCCHHH
Q 045083 236 RNSETPLY 243 (556)
Q Consensus 236 ~~g~t~L~ 243 (556)
..|.||.+
T Consensus 142 ~~g~t~~~ 149 (156)
T 1bi7_B 142 HARIDAAE 149 (156)
T ss_dssp --------
T ss_pred cCcCcccc
Confidence 66666654
No 87
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.88 E-value=6.5e-22 Score=163.82 Aligned_cols=126 Identities=35% Similarity=0.559 Sum_probs=87.8
Q ss_pred CCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhH
Q 045083 203 EQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLH 282 (556)
Q Consensus 203 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh 282 (556)
+|.||||.|+..|+.+++++|++.+.+. +..+..|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~g~t~l~ 73 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD------VNAKDKNGRTPLH 73 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------TTCCCTTSCCHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC------CcccCCCCCcHHH
Confidence 3667777777777777777777766663 55666777777777777777777777776653 4456667777777
Q ss_pred HHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q 045083 283 EAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPS 336 (556)
Q Consensus 283 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~ 336 (556)
+|+..|+.+++++|+++|++++ .+|..|+||||+|+..++.+++++|+++|++
T Consensus 74 ~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 74 LAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHcChHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 7777777777777777777664 5566777777777777777777777776653
No 88
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.88 E-value=4.6e-22 Score=167.16 Aligned_cols=127 Identities=25% Similarity=0.394 Sum_probs=85.1
Q ss_pred cCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCc
Q 045083 200 TNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNT 279 (556)
Q Consensus 200 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t 279 (556)
....+.||||.|+..|+.+++++|++.+.++ +..|.+|+||||+|+..|+.+++++|++.+.+ ++.+|..|+|
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~d~~g~t 82 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD------VNAVDAIGFT 82 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------TTCCCTTCCC
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCcCCCCCCC
Confidence 3445667777777777777777777776663 55666677777777777777777777776653 4556666777
Q ss_pred hhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcC
Q 045083 280 PLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKC 334 (556)
Q Consensus 280 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 334 (556)
|||+|+..|+.+++++|+++|++++ .+|..|+||||+|+.+|+.+++++|++.|
T Consensus 83 ~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 83 PLHLAAFIGHLEIAEVLLKHGADVN-AQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCc-CcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 7777777777777777777776654 55666777777777777777777766543
No 89
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.87 E-value=7.5e-23 Score=190.32 Aligned_cols=171 Identities=16% Similarity=0.142 Sum_probs=137.0
Q ss_pred CCCCeeEEeeeccccccccccccccccchHHHHHHHHhhCccccccccCCCChHHHHHHHhCcHHHHHHHHHHhccCCch
Q 045083 32 VMKNTVLHVNIMRSHLTLQTEEGEISSESTEFVEQILDLCPSLLFQANAKGDSPLHLAAKKGHTAIVEFLIVFANRQPID 111 (556)
Q Consensus 32 ~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~ 111 (556)
..+.+++.+++..|+. +.+.... ......+..|.||||+|+..|+.+++++|++ +.+
T Consensus 13 ~~~~~~~l~~~~~g~~-----------~~~~~~~-------~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~---- 69 (244)
T 3ui2_A 13 GEGAMEYLIEWKDGHS-----------PSWVPSS-------YIAADVVSEYETPWWTAARKADEQALSQLLE-DRD---- 69 (244)
T ss_dssp TTTEEEEEEEESSCCC-----------CEEEEGG-------GSCHHHHHHHHHHHHHHHTTTCHHHHHHTTT-TCC----
T ss_pred CCCccHHHHHHHcCCC-----------ccccccc-------ccccccccCCCCHHHHHHHcCCHHHHHHHHc-CCC----
Confidence 4677899999999998 5544431 1122345678999999999999999999998 655
Q ss_pred hhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCh
Q 045083 112 LERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQS 191 (556)
Q Consensus 112 ~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~ 191 (556)
++.+|..|.||||+|+..|+.+++++|+++|++++...+..|.||||+|+..|+.+++++|++++.+.
T Consensus 70 ------------~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~ 137 (244)
T 3ui2_A 70 ------------VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADI 137 (244)
T ss_dssp ------------TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred ------------CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 56688999999999999999999999999999988555588999999999999999999999988764
Q ss_pred hHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q 045083 192 AARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNC 261 (556)
Q Consensus 192 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~ 261 (556)
.. .+..|.||||+|+..++ ...+.+|||+|+..|+.+++++|++..
T Consensus 138 ~~------~d~~g~t~l~~A~~~~~------------------~~~~~~~l~~a~~~g~~~iv~~L~~~~ 183 (244)
T 3ui2_A 138 EV------EDERGLTALELAREILK------------------TTPKGNPMQFGRRIGLEKVINVLEGQV 183 (244)
T ss_dssp TC------CCTTCCCHHHHHHHHHT------------------TCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CC------CCCCCCcHHHHHHHHHh------------------ccCCCCHHHHHHHcChHHHHHHHHHhc
Confidence 32 78889999999875321 245678888888888888888887753
No 90
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.87 E-value=1.1e-21 Score=162.51 Aligned_cols=125 Identities=34% Similarity=0.566 Sum_probs=80.0
Q ss_pred CCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCCccc
Q 045083 81 KGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHVSYS 160 (556)
Q Consensus 81 ~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~ 160 (556)
+|+||||+|+..|+.+++++|++++.+ ++..+..|.||||+|+..|+.+++++|++.+.++. .
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~----------------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~ 63 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD----------------VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-A 63 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC----------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-C
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC----------------CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCc-c
Confidence 466777777777777777777776655 34456667777777777777777777777766655 4
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCC
Q 045083 161 ANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADP 228 (556)
Q Consensus 161 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~ 228 (556)
.+..|.||||+|+..|+.+++++|++++.+.. ..+..|.||||.|+..++.+++++|+++|+
T Consensus 64 ~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~------~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 64 KDKNGRTPLHLAARNGHLEVVKLLLEAGADVN------AKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT------CCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred cCCCCCcHHHHHHHcChHHHHHHHHHcCCCCc------ccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 55566666666666666666666666654422 145555666666666666666666655554
No 91
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.87 E-value=5.1e-22 Score=166.86 Aligned_cols=126 Identities=21% Similarity=0.246 Sum_probs=115.7
Q ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCC
Q 045083 233 SANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSE 312 (556)
Q Consensus 233 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~ 312 (556)
.....+.||||+|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|+
T Consensus 9 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~d~~g~ 81 (136)
T 2jab_A 9 HHGSDLGKKLLEAARAGQDDEVRILMANGAD------VNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVN-AVDAIGF 81 (136)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTCC
T ss_pred cccccccHHHHHHHHhCCHHHHHHHHHcCCC------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCC
Confidence 3456688999999999999999999999874 56788999999999999999999999999999986 7789999
Q ss_pred CHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCChhHHHHHHH
Q 045083 313 TPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVYTYPTDILERVLI 365 (556)
Q Consensus 313 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~~~~ 365 (556)
||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.++++.++.
T Consensus 82 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~ 134 (136)
T 2jab_A 82 TPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888764
No 92
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.86 E-value=2.7e-22 Score=168.89 Aligned_cols=123 Identities=26% Similarity=0.265 Sum_probs=104.4
Q ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCC
Q 045083 233 SANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSE 312 (556)
Q Consensus 233 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~ 312 (556)
.+|.+|+||||+|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~ 77 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSD------PNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVN-TTGYQND 77 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC------SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCGGGC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCccc-CcCCCCC
Confidence 5678888889888888888888888888764 46777889999999999999999999999988875 6788899
Q ss_pred CHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCChhHHHH
Q 045083 313 TPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVYTYPTDILER 362 (556)
Q Consensus 313 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~ 362 (556)
||||+|+.+|+.+++++|+++|++++.+|..|+||||+|+..+..+++..
T Consensus 78 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~ 127 (137)
T 3c5r_A 78 SPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLL 127 (137)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhh
Confidence 99999999999999999999999999999999999999887666655543
No 93
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.86 E-value=1.4e-22 Score=179.73 Aligned_cols=142 Identities=18% Similarity=0.208 Sum_probs=116.1
Q ss_pred ccCCCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCC
Q 045083 78 ANAKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHV 157 (556)
Q Consensus 78 ~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~ 157 (556)
.+..|.||||+|+..|+.+++++|++ +.+ ++.+|..|.||||+|+..|+.+++++|+++|+++
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~----------------~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 102 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE-DRD----------------VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL 102 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT-TSC----------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-cCC----------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 45678899999999999999999998 654 4667889999999999999999999999999998
Q ss_pred cccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCC
Q 045083 158 SYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRN 237 (556)
Q Consensus 158 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 237 (556)
+...+..|.||||+|+..|+.+++++|++++.+... ++..|.||||+|+..++. ..
T Consensus 103 ~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~------~d~~g~tpl~~A~~~~~~------------------~~ 158 (183)
T 3deo_A 103 DHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEV------EDERGLTALELAREILKT------------------TP 158 (183)
T ss_dssp TCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTC------CCTTSCCHHHHHHHHHHT------------------CC
T ss_pred CcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcC------CCCCCCCHHHHHHHhccC------------------cc
Confidence 744448899999999999999999999988866432 788888888888764321 34
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHc
Q 045083 238 SETPLYMAVANGSAEIVAEILQN 260 (556)
Q Consensus 238 g~t~L~~A~~~g~~~~v~~Ll~~ 260 (556)
+.++|++|+..|+.++++.|.++
T Consensus 159 ~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 159 KGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHTC
T ss_pred cccHHHHHHHcCHHHHHHHHHHh
Confidence 56888888888888888887654
No 94
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.86 E-value=3e-23 Score=184.16 Aligned_cols=164 Identities=14% Similarity=0.109 Sum_probs=139.5
Q ss_pred HHHhcCCchHHHHhhhhh--cccc---------cccCCCCeeEEeeeccccccccccccccccchHHHHHHHHhhCcccc
Q 045083 7 EAAAKGDIEPFREIARDE--LESI---------VTDVMKNTVLHVNIMRSHLTLQTEEGEISSESTEFVEQILDLCPSLL 75 (556)
Q Consensus 7 ~A~~~g~~~~v~~Ll~~g--~~~~---------~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 75 (556)
.|++.|..+.+++|++.+ ..+. ..+..|.||||.|+..|+. ++++.+ ++ +..+
T Consensus 6 ~aa~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~-----------~~v~~L---l~--~~~~ 69 (183)
T 3deo_A 6 IGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADE-----------QALSQL---LE--DRDV 69 (183)
T ss_dssp EEEEEETTTEEEEEEEETTCCCCEEEEGGGSCHHHHHHHHHHHHHHHHTTCH-----------HHHHHH---TT--TSCT
T ss_pred HHHHhcCCchhHHHHHHhCCCCccccchhcccccCCCCCCCHHHHHHHcCCH-----------HHHHHH---Hh--cCCC
Confidence 356778888888888653 2211 1246889999999999999 999999 55 5677
Q ss_pred ccccCCCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhc-cCCCcHhHHHHhcCCHHHHHHHHhcC
Q 045083 76 FQANAKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTN-EEQNTPLHEAVRLRSVDVVKILIKAD 154 (556)
Q Consensus 76 ~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~t~Lh~A~~~g~~~~v~~Ll~~~ 154 (556)
+..|..|.||||+|+..|+.+++++|+++|++ ++.++ ..|+||||+|+..|+.+++++|+++|
T Consensus 70 ~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----------------~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g 133 (183)
T 3deo_A 70 DAVDENGRTALLFVAGLGSDKCVRLLAEAGAD----------------LDHRDMRGGLTALHMAAGYVRPEVVEALVELG 133 (183)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC----------------TTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----------------CCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcC
Confidence 88999999999999999999999999999987 44556 88999999999999999999999999
Q ss_pred CCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhc
Q 045083 155 PHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKA 226 (556)
Q Consensus 155 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 226 (556)
++++ ..|..|.||||+|+..+ ....+.++|+.|+..|+.+++++|.++
T Consensus 134 a~~~-~~d~~g~tpl~~A~~~~-----------------------~~~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 134 ADIE-VEDERGLTALELAREIL-----------------------KTTPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp CCTT-CCCTTSCCHHHHHHHHH-----------------------HTCCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCc-CCCCCCCCHHHHHHHhc-----------------------cCcccccHHHHHHHcCHHHHHHHHHHh
Confidence 9987 78999999999998632 345678999999999999999999765
No 95
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.85 E-value=2.1e-21 Score=160.01 Aligned_cols=112 Identities=24% Similarity=0.374 Sum_probs=90.5
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCH
Q 045083 235 NRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETP 314 (556)
Q Consensus 235 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~ 314 (556)
+..|.||||+|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..|+.+++++|++.|++++ .+|..|+||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~d~~g~tp 76 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGED------VNRTLEGGRKPLHYAADCGQLEILEFLLLKGADIN-APDKHHITP 76 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCC------TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTT-CCCTTSCCH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCC------cCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCCH
Confidence 44567888888888888888888887763 45677788888888888888888888888888875 678888888
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHh
Q 045083 315 LYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVY 353 (556)
Q Consensus 315 L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~ 353 (556)
||+|+..++.+++++|+++|++++.+|.+|+||||+|..
T Consensus 77 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 77 LLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCC
Confidence 888888888888888888888888888888888888844
No 96
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.84 E-value=1.6e-21 Score=164.12 Aligned_cols=127 Identities=24% Similarity=0.309 Sum_probs=87.6
Q ss_pred cccCCCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCC
Q 045083 77 QANAKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPH 156 (556)
Q Consensus 77 ~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~ 156 (556)
.+|.+|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|++.+.+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----------------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 68 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSD----------------PNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL 68 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC----------------SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----------------CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc
Confidence 4567777888888888888888888777665 345667777777777777777777777777777
Q ss_pred CcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCHHHHHHHHhc
Q 045083 157 VSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRVDVVKILIKA 226 (556)
Q Consensus 157 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 226 (556)
++ ..|..|.||||+|+..|+.+++++|++++.+... .+..|.||||+|+..+..+++++|.+.
T Consensus 69 ~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~tpl~~A~~~~~~~~l~~l~~~ 131 (137)
T 3c5r_A 69 VN-TTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA------VNIFGLRPVDYTDDESMKSLLLLPEKN 131 (137)
T ss_dssp TT-CCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCGGGGCCCHHHHHHHSCC---
T ss_pred cc-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------CCCCCCCHHHHHhhccHHHHHhhcccc
Confidence 65 5566677777777777777777777776655322 566677777777666666666555543
No 97
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.84 E-value=1.4e-20 Score=178.13 Aligned_cols=131 Identities=17% Similarity=0.126 Sum_probs=97.7
Q ss_pred CCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhc---CCHHHHHHHHhcCCCCCccccCCCCCHH
Q 045083 239 ETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRL---RSVDVAKILIEADPHVPYSANRNSETPL 315 (556)
Q Consensus 239 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~g~t~L 315 (556)
.++|+.|+..|+.+.++.+++.+.+......++..+..|+||||+|+.. |+.+++++|+++|++++ .+|..|+|||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in-~~d~~g~TpL 209 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLD-KQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTT-CCCTTCCCHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCcc-ccCCCCCCHH
Confidence 4577778888888777777777764221101344467788888888887 77888888888888775 6677888888
Q ss_pred HHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCChhHHHHHHHhhCCC
Q 045083 316 YMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVYTYPTDILERVLIVRGTF 370 (556)
Q Consensus 316 ~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~~~~~~~~~ 370 (556)
|+|+.+|+.+++++|+++|++++.+|.+|+||||+|+..++.++++.++....+.
T Consensus 210 h~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 8888888888888888888888888888888888888888888777777665543
No 98
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.84 E-value=6.4e-21 Score=182.50 Aligned_cols=141 Identities=23% Similarity=0.160 Sum_probs=117.1
Q ss_pred CCcHhHHHHhcCCHHHHHHHHhcCCCCCcc-----CCCCCCCHHHHHHHc---CCHHHHHHHHHcCChhHHHHHhhhcCC
Q 045083 204 QNTPLHEAVRLRRVDVVKILIKADPHVPYS-----ANRNSETPLYMAVAN---GSAEIVAEILQNCPESAARQMLEKTNE 275 (556)
Q Consensus 204 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~-----~~~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~~ 275 (556)
..++|+.|+..|+.+.++.|++.++++... .+..|.||||+|+.. |+.+++++|++.+.+ ++.+|.
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad------vn~~d~ 224 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH------LDAKAA 224 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC------TTCCCT
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC------CCCCCC
Confidence 346799999999999999999888885332 688899999999987 899999999999874 577889
Q ss_pred CCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcC
Q 045083 276 EQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVYTY 355 (556)
Q Consensus 276 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~~~ 355 (556)
.|+||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..++.+++++|+++|++ .|.||||+|+..|
T Consensus 225 ~G~TpLh~A~~~g~~~~v~~Ll~~gad~~-~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g 297 (301)
T 2b0o_E 225 DGNTALHYAALYNQPDCLKLLLKGRALVG-TVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWV 297 (301)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCCS-CCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcC
Confidence 99999999999999999999999999986 7899999999999999999999999998875 5889999999876
Q ss_pred Ch
Q 045083 356 PT 357 (556)
Q Consensus 356 ~~ 357 (556)
..
T Consensus 298 ~~ 299 (301)
T 2b0o_E 298 IS 299 (301)
T ss_dssp --
T ss_pred Cc
Confidence 53
No 99
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.83 E-value=1e-20 Score=175.94 Aligned_cols=143 Identities=20% Similarity=0.213 Sum_probs=115.3
Q ss_pred hccCCCcHhHHHHhcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcC-CCCC
Q 045083 127 TNEEQNTPLHEAVRLRSVDVVKILIKADPHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTN-EEQN 205 (556)
Q Consensus 127 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~-~~g~ 205 (556)
.+..|.||||+|++.|+.+++++|++ +.+++ ..|..|.||||+|+..|+.+++++|++++.+... .+ ..|.
T Consensus 41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~-~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~------~~~~~g~ 112 (244)
T 3ui2_A 41 VVSEYETPWWTAARKADEQALSQLLE-DRDVD-AVDENGRTALLFVAGLGSDKCVRLLAEAGADLDH------RDMRGGL 112 (244)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHTTT-TCCTT-CBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC------CCSSSCC
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHc-CCCCC-CcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCc------CCCCCCC
Confidence 34568899999999999999999998 77776 6788899999999999999999999998876533 44 7788
Q ss_pred cHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHH
Q 045083 206 TPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAV 285 (556)
Q Consensus 206 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~ 285 (556)
||||.|+..|+.+++++|+++++++ +.+|..|.||||+|+..+ ....+.||||+|+
T Consensus 113 t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~~~-----------------------~~~~~~~~l~~a~ 168 (244)
T 3ui2_A 113 TALHMAAGYVRPEVVEALVELGADI-EVEDERGLTALELAREIL-----------------------KTTPKGNPMQFGR 168 (244)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHH-----------------------TTCCCSSHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHHH-----------------------hccCCCCHHHHHH
Confidence 8888888888888888888888884 678888888888887521 1245778888888
Q ss_pred hcCCHHHHHHHHhcCC
Q 045083 286 RLRSVDVAKILIEADP 301 (556)
Q Consensus 286 ~~g~~~~v~~Ll~~~~ 301 (556)
..|+.+++++|++.+.
T Consensus 169 ~~g~~~iv~~L~~~~~ 184 (244)
T 3ui2_A 169 RIGLEKVINVLEGQVF 184 (244)
T ss_dssp HHHHHHHHHHHHHHHE
T ss_pred HcChHHHHHHHHHhcc
Confidence 8888888888887543
No 100
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.83 E-value=5.1e-21 Score=175.49 Aligned_cols=136 Identities=20% Similarity=0.277 Sum_probs=98.3
Q ss_pred cCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHc-CChhHHHHHhhhcCCCCC
Q 045083 200 TNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQN-CPESAARQMLEKTNEEQN 278 (556)
Q Consensus 200 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~~g~ 278 (556)
.+..|.||||.|+..|+.+++++|++.+.++ +.+|..|+||||+|+..|+.+++++|++. +.+ ++.+|..|+
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~------~~~~d~~g~ 141 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGV-NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE------LNQQNKLGD 141 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC------CCCCCTTSC
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC------ccccCCCCC
Confidence 5677888888888888888888888888774 67778888888888888888888888877 543 566778888
Q ss_pred chhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC
Q 045083 279 TPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPSPAHEGPD 343 (556)
Q Consensus 279 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~ 343 (556)
||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..++.++++.|+..++..+.++.+
T Consensus 142 tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~ 205 (222)
T 3ehr_A 142 TALHAAAWKGYADIVQLLLAKGARTD-LRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAE 205 (222)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCSC-CCCTTSCCHHHHCCSHHHHHHHC---------------
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCc-cccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchh
Confidence 88888888888888888888888775 67788888888888888888888877777776655544
No 101
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.82 E-value=1.8e-20 Score=154.31 Aligned_cols=115 Identities=18% Similarity=0.200 Sum_probs=99.0
Q ss_pred cCCCCCcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCc
Q 045083 200 TNEEQNTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNT 279 (556)
Q Consensus 200 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t 279 (556)
.+..|.||||.|+..|+.+++++|++.+.++ +..|..|+||||+|+..|+.+++++|++.+.+ ++.+|..|+|
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~d~~g~t 75 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLKGAD------INAPDKHHIT 75 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC------TTCCCTTSCC
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC------CCcCCCCCCC
Confidence 4567889999999999999999999998884 78888999999999999999999999998874 5678889999
Q ss_pred hhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcC
Q 045083 280 PLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANG 322 (556)
Q Consensus 280 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~ 322 (556)
|||+|+..|+.+++++|+++|++++ .+|..|+||||+|...+
T Consensus 76 pL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 76 PLLSAVYEGHVSCVKLLLSKGADKT-VKGPDGLTAFEATDNQA 117 (123)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHCCCHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHhCCHH
Confidence 9999999999999999999999875 78899999999994433
No 102
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.82 E-value=1e-19 Score=174.14 Aligned_cols=138 Identities=25% Similarity=0.193 Sum_probs=83.9
Q ss_pred cHhHHHHhcCCHHHHHHHHhcCCCCccc-----ccCCCCcHHHHHHHc---CCHHHHHHHHHhCCChhHHHHhhhcCCCC
Q 045083 133 TPLHEAVRLRSVDVVKILIKADPHVSYS-----ANRNSETLLYMAVAN---GSAEIVAEILQNCPQSAARQMLEKTNEEQ 204 (556)
Q Consensus 133 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~-----~~~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g 204 (556)
++|+.|+..|+.+.++.|++.+++++.. .+..|.||||+|+.. |+.+++++|++++++.. ..+..|
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn------~~d~~G 226 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLD------AKAADG 226 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTT------CCCTTC
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCC------CCCCCC
Confidence 4577777777777777777777666532 456666677776665 66666666666665432 256666
Q ss_pred CcHhHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHH
Q 045083 205 NTPLHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEA 284 (556)
Q Consensus 205 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A 284 (556)
.||||+|+..|+.+++++|++.++++ +.+|.+|.||||+|+..|+.+++++|++.++ ..|.||||+|
T Consensus 227 ~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga------------~~g~tpLh~A 293 (301)
T 2b0o_E 227 NTALHYAALYNQPDCLKLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLEQAQA------------GTFAFPLHVD 293 (301)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCC-SCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH------------HTTSSCCC--
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHhcC------------CCCCChhHHH
Confidence 66666666666666666666666663 5666666666666666666666666666542 1356666666
Q ss_pred HhcCC
Q 045083 285 VRLRS 289 (556)
Q Consensus 285 ~~~g~ 289 (556)
++.|+
T Consensus 294 ~~~g~ 298 (301)
T 2b0o_E 294 YSWVI 298 (301)
T ss_dssp -----
T ss_pred HhcCC
Confidence 66554
No 103
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.82 E-value=1.2e-20 Score=173.11 Aligned_cols=130 Identities=20% Similarity=0.189 Sum_probs=112.9
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhc-CCCCCccccCCCC
Q 045083 234 ANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEA-DPHVPYSANRNSE 312 (556)
Q Consensus 234 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~g~ 312 (556)
.+.+|.||||+|+..|+.++++.|++.+.+ ++.+|..|+||||+|+..|+.+++++|++. |.+++ .+|..|+
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~-~~d~~g~ 141 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVG------VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELN-QQNKLGD 141 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCC-CCCTTSC
T ss_pred cccccccccccccccCcHHHHHHHHhCCCC------ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCcc-ccCCCCC
Confidence 356789999999999999999999998874 567889999999999999999999999999 88875 7899999
Q ss_pred CHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCChhHHHHHHHhhCCC
Q 045083 313 TPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVYTYPTDILERVLIVRGTF 370 (556)
Q Consensus 313 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~~~~~~~~~ 370 (556)
||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..+..++++.++......
T Consensus 142 tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~ 199 (222)
T 3ehr_A 142 TALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVR 199 (222)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC---------
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhh
Confidence 9999999999999999999999999999999999999999988888887766554433
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.81 E-value=1.6e-19 Score=170.76 Aligned_cols=194 Identities=18% Similarity=0.151 Sum_probs=143.0
Q ss_pred hccCCCcHhHHHHhcCCHHHHHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCc
Q 045083 127 TNEEQNTPLHEAVRLRSVDVVKILIKADPHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNT 206 (556)
Q Consensus 127 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t 206 (556)
.|..+.+.++.+...|+..+.+++...-+.........+....+ ....-..+++.......... ......+
T Consensus 62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~----~~~fI~aKYl~~~f~~~~~~-----~~~~~l~ 132 (278)
T 1dcq_A 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIA----RKDYITAKYMERRYARKKHA-----DTAAKLH 132 (278)
T ss_dssp TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHH----HHHHHHHHHTTCTTSCCCSS-----SHHHHHH
T ss_pred cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHH----HHHHHHHHHHHhhccccccc-----ccchhhh
Confidence 46788899999999999877776654332221111111111111 11111111222211110000 1112246
Q ss_pred HhHHHHhcCCHHHHHHHHhcCCCCC-----ccCCCCCCCHHHHHHHc---CCHHHHHHHHHcCChhHHHHHhhhcCCCCC
Q 045083 207 PLHEAVRLRRVDVVKILIKADPHVP-----YSANRNSETPLYMAVAN---GSAEIVAEILQNCPESAARQMLEKTNEEQN 278 (556)
Q Consensus 207 ~L~~A~~~~~~~~v~~Ll~~~~~~~-----~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~ 278 (556)
+|+.|+..|+.+.++.+++.+.+.. ...+..|+||||+|+.. |+.+++++|++++.+ ++.+|..|+
T Consensus 133 ~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~------in~~d~~g~ 206 (278)
T 1dcq_A 133 SLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN------LDKQTGKGS 206 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC------TTCCCTTCC
T ss_pred hhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC------ccccCCCCC
Confidence 8999999999999999999998853 34488899999999999 899999999999974 678899999
Q ss_pred chhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q 045083 279 TPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPS 336 (556)
Q Consensus 279 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~ 336 (556)
||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|+++|++
T Consensus 207 TpLh~A~~~g~~~~v~~Ll~~gad~~-~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 207 TALHYCCLTDNAECLKLLLRGKASIE-IANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCC-CccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999999986 7899999999999999999999999999875
No 105
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.78 E-value=9.4e-19 Score=136.04 Aligned_cols=91 Identities=34% Similarity=0.556 Sum_probs=51.4
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHH
Q 045083 238 SETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYM 317 (556)
Q Consensus 238 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~ 317 (556)
|+||||+|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|+||||+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~------~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~t~l~~ 74 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGAD------VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHL 74 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCC------CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHH
Confidence 45555555555555555555555542 34455555566666666666666666666555543 445556666666
Q ss_pred HHHcCCHHHHHHHHhcCC
Q 045083 318 AAANGSVKIVAKILQKCP 335 (556)
Q Consensus 318 A~~~~~~~~v~~Ll~~~~ 335 (556)
|+..|+.+++++|+++|+
T Consensus 75 A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 75 AARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp HHHTTCHHHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHHcCC
Confidence 666666666666555554
No 106
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.78 E-value=7.9e-19 Score=136.49 Aligned_cols=92 Identities=35% Similarity=0.580 Sum_probs=79.9
Q ss_pred CCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCCccc
Q 045083 81 KGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHVSYS 160 (556)
Q Consensus 81 ~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~ 160 (556)
+|+||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|++.|++++ .
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~----------------~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~ 63 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD----------------VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-A 63 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC----------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-C
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC----------------CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-c
Confidence 478999999999999999999998876 46678889999999999999999999999998887 7
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHhCC
Q 045083 161 ANRNSETLLYMAVANGSAEIVAEILQNCP 189 (556)
Q Consensus 161 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~ 189 (556)
.|..|.||||+|+..|+.+++++|+++++
T Consensus 64 ~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 64 KDKNGRTPLHLAARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 78889999999999999999999988764
No 107
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.78 E-value=9.6e-19 Score=171.06 Aligned_cols=146 Identities=18% Similarity=0.196 Sum_probs=111.9
Q ss_pred cCCCCCcHhHHHHhc-CCHHHHHHHHhcCCCCCccCC--CCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCC
Q 045083 200 TNEEQNTPLHEAVRL-RRVDVVKILIKADPHVPYSAN--RNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEE 276 (556)
Q Consensus 200 ~~~~g~t~L~~A~~~-~~~~~v~~Ll~~~~~~~~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 276 (556)
....+.|+||.|+.. ++.++++.|++.+.++ +..+ .+|.||||+|+..|+.+++++|++++.+ ++..|..
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad------vn~~d~~ 267 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQNGAN------VNQADSA 267 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTT
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC------CCCCCCC
Confidence 344567899999999 9999999999999885 5566 7899999999999999999999999874 6788899
Q ss_pred CCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCC---CCCCCCCCCcHHHHHHh
Q 045083 277 QNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPS---PAHEGPDGKTALHAAVY 353 (556)
Q Consensus 277 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~---~~~~d~~g~t~L~~A~~ 353 (556)
|+||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..++.+++++|+..+.. ....+..+.|+++++..
T Consensus 268 G~TpLh~A~~~g~~~~v~~LL~~Gad~~-~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~ 346 (368)
T 3jue_A 268 GRGPLHHATILGHTGLACLFLKRGADLG-ARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRD 346 (368)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHHC---------------------
T ss_pred CCCHHHHHHHcCcHHHHHHHHHCcCCCC-CcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHH
Confidence 9999999999999999999999999986 7789999999999999999999998877533 44566777888877654
No 108
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.77 E-value=2.1e-18 Score=177.50 Aligned_cols=135 Identities=23% Similarity=0.183 Sum_probs=111.7
Q ss_pred CcHhHHHHhcCCHHHHHHHHhcCCCCCccC------CCCCCCHHHHHHH---cCCHHHHHHHHHcCChhHHHHHhhhcCC
Q 045083 205 NTPLHEAVRLRRVDVVKILIKADPHVPYSA------NRNSETPLYMAVA---NGSAEIVAEILQNCPESAARQMLEKTNE 275 (556)
Q Consensus 205 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~------~~~g~t~L~~A~~---~g~~~~v~~Ll~~~~~~~~~~~~~~~~~ 275 (556)
.+.||.|+..|+.+.++.|++.++++ +.. +..|.||||+|+. .|+.+++++|++.+++ ++.+|.
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~-n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~------vn~~d~ 205 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH------LDAKAA 205 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCS-SSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC------TTCCCS
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccc-cCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC------CCccCC
Confidence 36799999999999999999998885 333 7889999999976 8999999999999974 678899
Q ss_pred CCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHh
Q 045083 276 EQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHAAVY 353 (556)
Q Consensus 276 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~A~~ 353 (556)
.|+||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|+++|++++. +|+|.+..
T Consensus 206 ~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~------~~~h~~~~ 276 (497)
T 3lvq_E 206 DGNTALHYAALYNQPDCLKLLLKGRALVG-TVNEAGETALDIARKKHHKECEELLEQAQAGTFA------FPLHVDYS 276 (497)
T ss_dssp SSCCHHHHHTTTTCHHHHHHHHHTCCCCS-CCCTTCCCHHHHHHHTTCHHHHHHHHHTCC------------------
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC------Ccceeecc
Confidence 99999999999999999999999999986 7899999999999999999999999999999876 56776654
No 109
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.77 E-value=4.3e-19 Score=144.12 Aligned_cols=108 Identities=25% Similarity=0.362 Sum_probs=86.3
Q ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCC
Q 045083 233 SANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSE 312 (556)
Q Consensus 233 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~ 312 (556)
.+|.+|+||||+|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~d~~g~ 76 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGAD------VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVN-ARSKDGN 76 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCC------SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTT-CCCTTCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCc-ccCCCCC
Confidence 3567788888888888888888888877763 45677788888888888888888888888888875 6677888
Q ss_pred CHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcH
Q 045083 313 TPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTA 347 (556)
Q Consensus 313 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~ 347 (556)
||||+|+..++.+++++|+++|++++.++..|.+|
T Consensus 77 tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 77 TPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp CTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred CHHHHHHHCCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 88888888888888888888888888888888877
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.77 E-value=3.6e-19 Score=183.21 Aligned_cols=134 Identities=19% Similarity=0.188 Sum_probs=101.5
Q ss_pred HHHHHHHhcCCchHHHHhhhhhcccccc------cCCCCeeEEee---eccccccccccccccccchHHHHHHHHhhCcc
Q 045083 3 RKLYEAAAKGDIEPFREIARDELESIVT------DVMKNTVLHVN---IMRSHLTLQTEEGEISSESTEFVEQILDLCPS 73 (556)
Q Consensus 3 ~~L~~A~~~g~~~~v~~Ll~~g~~~~~~------d~~g~t~Lh~A---~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 73 (556)
..|+.|+..||.+.++.|+++|++++.. |..|.||||+| +..|+. +++++|++. +.
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~-----------~~v~~Ll~~----ga 198 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASL-----------PLVDFIIQN----GG 198 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTH-----------HHHHHHHHH----SC
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccH-----------HHHHHHHHc----CC
Confidence 4699999999999999999999998866 67888888888 448888 888888553 56
Q ss_pred ccccccCCCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhc
Q 045083 74 LLFQANAKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKA 153 (556)
Q Consensus 74 ~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~ 153 (556)
+++..|.+|+||||+|+..|+.++|++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++
T Consensus 199 ~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~----------------~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ 262 (497)
T 3lvq_E 199 HLDAKAADGNTALHYAALYNQPDCLKLLLKGRAL----------------VGTVNEAGETALDIARKKHHKECEELLEQA 262 (497)
T ss_dssp CTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCC----------------CSCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC----------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence 6777888888888888888888888888888877 456778888888888888888888888888
Q ss_pred CCCCcccccCCCCcHHHHHHH
Q 045083 154 DPHVSYSANRNSETLLYMAVA 174 (556)
Q Consensus 154 ~~~~~~~~~~~g~t~L~~A~~ 174 (556)
|++.+ .+|+|.+..
T Consensus 263 ga~~~-------~~~~h~~~~ 276 (497)
T 3lvq_E 263 QAGTF-------AFPLHVDYS 276 (497)
T ss_dssp CC-------------------
T ss_pred CCCCC-------CCcceeecc
Confidence 87765 256666543
No 111
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.75 E-value=5.4e-18 Score=165.75 Aligned_cols=122 Identities=20% Similarity=0.240 Sum_probs=60.7
Q ss_pred CCcHhHHHHhc-CCHHHHHHHHhcCCCCccccc--CCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcH
Q 045083 131 QNTPLHEAVRL-RSVDVVKILIKADPHVSYSAN--RNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTP 207 (556)
Q Consensus 131 g~t~Lh~A~~~-g~~~~v~~Ll~~~~~~~~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~ 207 (556)
+.|+||.|+.. |+.++++.|++.|.+++ ..+ ..|.||||+|+..|+.+++++|++++.+.. ..+..|.||
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn-~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn------~~d~~G~Tp 271 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAHGADVN-WVNGGQDNATPLIQATAANSLLACEFLLQNGANVN------QADSAGRGP 271 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHTTCCTT-CCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT------CCCTTSCCH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHcCCCCC-ccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCC------CCCCCCCCH
Confidence 34455555555 55555555555555544 222 445555555555555555555555544322 144455555
Q ss_pred hHHHHhcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 045083 208 LHEAVRLRRVDVVKILIKADPHVPYSANRNSETPLYMAVANGSAEIVAEILQN 260 (556)
Q Consensus 208 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 260 (556)
||+|+..|+.+++++|+++++++ +..|.+|.||||+|+..|+.+++++|++.
T Consensus 272 Lh~A~~~g~~~~v~~LL~~Gad~-~~~d~~G~TpL~~A~~~g~~~iv~lLl~~ 323 (368)
T 3jue_A 272 LHHATILGHTGLACLFLKRGADL-GARDSEGRDPLTIAMETANADIVTLLRLA 323 (368)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHcCcHHHHHHHHHCcCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 55555555555555555555442 44444555555555555555555555443
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.73 E-value=8.5e-18 Score=136.41 Aligned_cols=108 Identities=27% Similarity=0.368 Sum_probs=84.7
Q ss_pred cccCCCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCC
Q 045083 77 QANAKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPH 156 (556)
Q Consensus 77 ~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~ 156 (556)
.+|.+|.||||+|+..|+.+++++|++++.+ ++..|..|.||||+|+..|+.+++++|++.+++
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----------------~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 67 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGAD----------------VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD 67 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCC----------------SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----------------CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 4577888888888888888888888887766 455678888888888888888888888888888
Q ss_pred CcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcH
Q 045083 157 VSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTP 207 (556)
Q Consensus 157 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~ 207 (556)
++ ..|..|.||||+|+..|+.+++++|++++++... .+..|.+|
T Consensus 68 ~~-~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~------~~~~~~~~ 111 (115)
T 2l6b_A 68 VN-ARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNA------RSWGSSHH 111 (115)
T ss_dssp TT-CCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHH------HSCCCC--
T ss_pred Cc-ccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCc------CCcccccc
Confidence 76 6677888888888888888888888888766543 56666655
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.66 E-value=2.8e-16 Score=126.08 Aligned_cols=92 Identities=26% Similarity=0.360 Sum_probs=72.7
Q ss_pred hhcCCCCCchhHHHHhcCCHHHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHH
Q 045083 271 EKTNEEQNTPLHEAVRLRSVDVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQKCPSPAHEGPDGKTALHA 350 (556)
Q Consensus 271 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~d~~g~t~L~~ 350 (556)
...|.+|.||||+|+..|+.+++++|++.|++++ .+|..|+||||+|+.+|+.+++++|+++|++++.+|..|+||||+
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~-~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~ 96 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVA-AKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDI 96 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHH
Confidence 4556778888888888888888888888888775 667888888888888888888888888888888888888888888
Q ss_pred HHhcCChhHHHHH
Q 045083 351 AVYTYPTDILERV 363 (556)
Q Consensus 351 A~~~~~~~~~~~~ 363 (556)
|+..++.++++.+
T Consensus 97 A~~~~~~~~~~~L 109 (110)
T 2zgd_A 97 SIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHh
Confidence 8888887776543
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.66 E-value=1.9e-16 Score=127.16 Aligned_cols=96 Identities=22% Similarity=0.322 Sum_probs=78.8
Q ss_pred ccccccccCCCChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHH
Q 045083 72 PSLLFQANAKGDSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILI 151 (556)
Q Consensus 72 ~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll 151 (556)
+......|.+|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|+
T Consensus 14 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~----------------i~~~d~~g~tpLh~A~~~~~~~~v~~Ll 77 (110)
T 2zgd_A 14 VPRGSHMGSDLGKKLLEAARAGQDDEVRILMANGAD----------------VAAKDKNGSTPLHLAARNGHLEVVKLLL 77 (110)
T ss_dssp --------CCHHHHHHHHHHHTCHHHHHHHHHTTCC----------------TTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred CCcccccCCccchHHHHHHHcCCHHHHHHHHHcCCC----------------CCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 334556788899999999999999999999998876 4567889999999999999999999999
Q ss_pred hcCCCCcccccCCCCcHHHHHHHcCCHHHHHHH
Q 045083 152 KADPHVSYSANRNSETLLYMAVANGSAEIVAEI 184 (556)
Q Consensus 152 ~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 184 (556)
++|++++ ..|..|.||||+|+..|+.+++++|
T Consensus 78 ~~ga~~~-~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 78 EAGADVX-AQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HcCCCcc-ccccCCCcHHHHHHHcCCHHHHHHh
Confidence 9998876 6788899999999999999998876
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=76.59 E-value=0.83 Score=26.62 Aligned_cols=22 Identities=32% Similarity=0.673 Sum_probs=18.5
Q ss_pred CHHHHHHHhcCCchHHHHhhhh
Q 045083 2 DRKLYEAAAKGDIEPFREIARD 23 (556)
Q Consensus 2 ~~~L~~A~~~g~~~~v~~Ll~~ 23 (556)
+..++.||..||.+.++.|-.+
T Consensus 14 EQqiyvA~seGd~etv~~Le~Q 35 (40)
T 1gp8_A 14 RKQMDAAASKGDVETYRKLKAK 35 (40)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHH
Confidence 4678999999999999988543
No 116
>3k49_A MRNA-binding protein PUF3; PUF3, pumilio, RNA binding, mitochondrial mRNA,, membrane, mitochondrion; HET: CIT; 2.50A {Saccharomyces cerevisiae} SCOP: a.118.1.0 PDB: 3k4e_A
Probab=70.11 E-value=9.9 Score=36.38 Aligned_cols=199 Identities=11% Similarity=0.072 Sum_probs=91.3
Q ss_pred hhccCCCcHhHHHHhcCCHHHHHHHHhc--CCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCC
Q 045083 126 MTNEEQNTPLHEAVRLRSVDVVKILIKA--DPHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEE 203 (556)
Q Consensus 126 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~--~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 203 (556)
.+|..|+..+.-....+..+..+.+++. |.-.....+..|...+.-+......+-...+++.-..... . -..|..
T Consensus 73 ~~d~~gn~vvQkll~~~~~~~~~~i~~~~~g~~~~L~~~~~G~rVlQk~le~~~~~q~~~ii~el~~~~~-~--L~~d~~ 149 (369)
T 3k49_A 73 SNDVFGNYVIQKFFEFGSKIQKNTLVDQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVLELSDSVL-Q--MIKDQN 149 (369)
T ss_dssp HHSTTTHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHHSTTHHHHHHHHHHHSCHHHHHHHHGGGTTCHH-H--HHHSTT
T ss_pred hhCcccccHHHHHHHhCCHHHHHHHHHHHhhhHHHHhcChhhHHHHHHHHHhCCHHHHHHHHHHHHHHHH-H--HhcCcc
Confidence 4688888888888888887776666653 1111112333444444444444443333333332111110 0 114555
Q ss_pred CCcHhHHHHhcCCHHHHHHHHhcCCC--CCccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchh
Q 045083 204 QNTPLHEAVRLRRVDVVKILIKADPH--VPYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPL 281 (556)
Q Consensus 204 g~t~L~~A~~~~~~~~v~~Ll~~~~~--~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L 281 (556)
|+..+......+..+..+.+++.-.. ..-..+..|...+..+...+..+--+.+++.-.+... .-..|..|+..+
T Consensus 150 Gn~ViQ~~l~~~~~~~~~~i~~~~~~~~~~ls~~~~Gs~Vvq~~l~~~~~~~~~~i~~~l~~~~~---~L~~d~~GnyVi 226 (369)
T 3k49_A 150 GNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLLEFGSSEDQESILNELKDFIP---YLIQDQYGNYVI 226 (369)
T ss_dssp HHHHHHHHHHHSCGGGCHHHHHHHTTTHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHTTTTCHH---HHHHSTTHHHHH
T ss_pred cchHHHHHHHhCCHHHHHHHHHHHHHHHHHHhCCCccCcHHHHHHHhCCHHHHHHHHHHHHHHHH---HHhcCCcHHHHH
Confidence 55555555544433222222221100 0012344455555555555444433333332211111 113456677667
Q ss_pred HHHHhcCCH----------HHHHHHHhcCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHh
Q 045083 282 HEAVRLRSV----------DVAKILIEADPHVPYSANRNSETPLYMAAANGSVKIVAKILQ 332 (556)
Q Consensus 282 h~A~~~g~~----------~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 332 (556)
..+...+.. .+++.+..+-.. ...++.|...+..+...+..+.-+.++.
T Consensus 227 Q~~l~~~~~~~~~~~~~~~~i~~~l~~~~~~--Ls~~k~gS~Vvek~l~~~~~~~r~~ii~ 285 (369)
T 3k49_A 227 QYVLQQDQFTNKEMVDIKQEIIETVANNVVE--YSKHKFASNVVEKSILYGSKNQKDLIIS 285 (369)
T ss_dssp HHHHTCCTTSCHHHHHHHHHHHHHHHTTHHH--HHTSTTHHHHHHHHHHHSCHHHHHHHHT
T ss_pred HHHHhcCCchhhhhHhHHHHHHHHHHHHHHH--HHhhhHhhHHHHHHHHhCCHHHHHHHHH
Confidence 666666542 233333322111 1345566666666666666655555444
No 117
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=65.67 E-value=3.1 Score=39.65 Aligned_cols=97 Identities=11% Similarity=0.119 Sum_probs=44.8
Q ss_pred hccCCCcHhHHHHhcCCHHHHHHHHhcCCC--CcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCC
Q 045083 127 TNEEQNTPLHEAVRLRSVDVVKILIKADPH--VSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQ 204 (556)
Q Consensus 127 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~--~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g 204 (556)
+|..|+..+......+..+..+.+++.-.. .....+..|...+.-+......+-...+++.-.... . .-..|..|
T Consensus 141 ~d~~Gn~ViQk~l~~~~~~~~~~i~~~~~~~~~~ls~~~~G~~Vvq~~le~~~~~~~~~ii~~l~~~~-~--~L~~d~~G 217 (351)
T 3gvo_A 141 KDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHT-E--QLVQDQYG 217 (351)
T ss_dssp HSTTHHHHHHHHHHHSCGGGTHHHHHHTTTTHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHHHHTTH-H--HHHTSTTH
T ss_pred HhhhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCcHhHHHHHHHHHHCCHHHHHHHHHHHhhhH-H--hcCCCchH
Confidence 566666666666555554444444442111 011223334444444444333322222222110000 0 11267777
Q ss_pred CcHhHHHHhcCCHHHHHHHHhc
Q 045083 205 NTPLHEAVRLRRVDVVKILIKA 226 (556)
Q Consensus 205 ~t~L~~A~~~~~~~~v~~Ll~~ 226 (556)
+..+..+...+..+..+.+++.
T Consensus 218 n~ViQ~~l~~~~~~~~~~i~~~ 239 (351)
T 3gvo_A 218 NYVIQHVLEHGRPEDKSKIVSE 239 (351)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHT
T ss_pred HHHHHHHHHhCchhhHHHHHHH
Confidence 7777777777777666666653
No 118
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=63.06 E-value=12 Score=35.59 Aligned_cols=194 Identities=10% Similarity=0.064 Sum_probs=102.7
Q ss_pred hhccCCCcHhHHHHhcCCHHHHHHHHhc--CCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCC
Q 045083 126 MTNEEQNTPLHEAVRLRSVDVVKILIKA--DPHVSYSANRNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEE 203 (556)
Q Consensus 126 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~--~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 203 (556)
.+|..|+..+.-....++.+....+++. |.-.....+..|...+..+......+-...+++.-..... . -..|..
T Consensus 68 ~~d~~gn~vvQklle~~~~~~~~~i~~~i~g~~~~l~~~~~G~rvvQk~le~~~~~~~~~i~~el~~~~~-~--L~~d~~ 144 (351)
T 3gvo_A 68 MTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVL-K--CVKDQN 144 (351)
T ss_dssp HTSTTHHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHGGGTTCHH-H--HHHSTT
T ss_pred HhChhhhHHHHHHHhhCCHHHHHHHHHHHHhhHHHHhhCHHhHHHHHHHHHhCCHHHHHHHHHHhhhhHH-H--HHHhhh
Confidence 4688888888888888888877777663 2222224455666666666666655544444443211111 1 115666
Q ss_pred CCcHhHHHHhcCCHHHHHHHHhcCCCC--CccCCCCCCCHHHHHHHcCCHHHHHHHHHcCChhHHHHHhhhcCCCCCchh
Q 045083 204 QNTPLHEAVRLRRVDVVKILIKADPHV--PYSANRNSETPLYMAVANGSAEIVAEILQNCPESAARQMLEKTNEEQNTPL 281 (556)
Q Consensus 204 g~t~L~~A~~~~~~~~v~~Ll~~~~~~--~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L 281 (556)
|+..+......+..+..+.+++.-... .-..+..|...+..+......+-...+++.-.... ..-..|..|+..+
T Consensus 145 Gn~ViQk~l~~~~~~~~~~i~~~~~~~~~~ls~~~~G~~Vvq~~le~~~~~~~~~ii~~l~~~~---~~L~~d~~Gn~Vi 221 (351)
T 3gvo_A 145 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHT---EQLVQDQYGNYVI 221 (351)
T ss_dssp HHHHHHHHHHHSCGGGTHHHHHHTTTTHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHHHHTTH---HHHHTSTTHHHHH
T ss_pred hhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCcHhHHHHHHHHHHCCHHHHHHHHHHHhhhH---HhcCCCchHHHHH
Confidence 766666666555544444444422110 01223444444444444433322222221110000 0114578899899
Q ss_pred HHHHhcCCHHHHHHHHhcCCC--CCccccCCCCCHHHHHHHcCCHH
Q 045083 282 HEAVRLRSVDVAKILIEADPH--VPYSANRNSETPLYMAAANGSVK 325 (556)
Q Consensus 282 h~A~~~g~~~~v~~Ll~~~~~--~~~~~~~~g~t~L~~A~~~~~~~ 325 (556)
......+..+..+.+++.-.. .....++.|...+.-+.+.+..+
T Consensus 222 Q~~l~~~~~~~~~~i~~~l~~~~~~Ls~~k~gs~Vvek~l~~~~~~ 267 (351)
T 3gvo_A 222 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRA 267 (351)
T ss_dssp HHHHHHSCHHHHHHHHHTTTTCHHHHHTSTTHHHHHHHHHHHSCHH
T ss_pred HHHHHhCchhhHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhCCHH
Confidence 999998888777777764211 11134556667777777766654
No 119
>3k49_A MRNA-binding protein PUF3; PUF3, pumilio, RNA binding, mitochondrial mRNA,, membrane, mitochondrion; HET: CIT; 2.50A {Saccharomyces cerevisiae} SCOP: a.118.1.0 PDB: 3k4e_A
Probab=52.26 E-value=15 Score=35.06 Aligned_cols=41 Identities=15% Similarity=0.071 Sum_probs=19.5
Q ss_pred HHHhcCCchHHHHhhhh---hcccccccCCCCeeEEeeeccccc
Q 045083 7 EAAAKGDIEPFREIARD---ELESIVTDVMKNTVLHVNIMRSHL 47 (556)
Q Consensus 7 ~A~~~g~~~~v~~Ll~~---g~~~~~~d~~g~t~Lh~A~~~g~~ 47 (556)
.+...++.+..+.++++ ..-...+|..|+..+......+..
T Consensus 48 ~~l~~~~~~~~~~I~~el~~~~~~L~~d~~gn~vvQkll~~~~~ 91 (369)
T 3k49_A 48 RELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKFFEFGSK 91 (369)
T ss_dssp HHHTTCCHHHHHHHHHHHGGGHHHHHHSTTTHHHHHHHHHHCCH
T ss_pred HHhccCCHHHHHHHHHHHHHHHHHHhhCcccccHHHHHHHhCCH
Confidence 34444444444444443 111123556666666655555555
No 120
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=34.05 E-value=1.9e+02 Score=24.03 Aligned_cols=132 Identities=13% Similarity=0.158 Sum_probs=77.6
Q ss_pred ChHHHHHHHhCcHHHHHHHHHHhccCCchhhhhhhHHHHHHHhhhccCCCcHhHHHHhcCCHHHHHHHHhcCCCCccccc
Q 045083 83 DSPLHLAAKKGHTAIVEFLIVFANRQPIDLERGVESAARQILKMTNEEQNTPLHEAVRLRSVDVVKILIKADPHVSYSAN 162 (556)
Q Consensus 83 ~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~ 162 (556)
++=+..|...|+.+....+.+.... ...-.+.=..|...|+.++++.-.++-.+..
T Consensus 9 ~~rF~LAL~lg~l~~A~e~a~~l~~--------------------~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~---- 64 (177)
T 3mkq_B 9 HIRFDLALEYGNLDAALDEAKKLND--------------------SITWERLIQEALAQGNASLAEMIYQTQHSFD---- 64 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHCC--------------------HHHHHHHHHHHHHTTCHHHHHHHHHHTTCHH----
T ss_pred HHHHHHHHhcCCHHHHHHHHHHhCC--------------------HHHHHHHHHHHHHcCChHHHHHHHHHhCCHH----
Confidence 3567788899999888777654321 0001122245777899999988887544432
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhCCChhHHHHhhhcCCCCCcHhHHHHhcCCH-HHHHHHHhcCCCCCccCCCCCCCH
Q 045083 163 RNSETLLYMAVANGSAEIVAEILQNCPQSAARQMLEKTNEEQNTPLHEAVRLRRV-DVVKILIKADPHVPYSANRNSETP 241 (556)
Q Consensus 163 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~~~~~~~~~~~~g~t~ 241 (556)
..+.+....|+.+-++.+.+.. ....+...+.+.+...|+. ++++.|.+.+.- .-+
T Consensus 65 ----~L~~Ly~~tg~~e~L~kla~iA----------~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~---------~eA 121 (177)
T 3mkq_B 65 ----KLSFLYLVTGDVNKLSKMQNIA----------QTREDFGSMLLNTFYNNSTKERSSIFAEGGSL---------PLA 121 (177)
T ss_dssp ----HHHHHHHHHTCHHHHHHHHHHH----------HHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCH---------HHH
T ss_pred ----HHHHHHHHhCCHHHHHHHHHHH----------HHCccHHHHHHHHHHcCCHHHHHHHHHHCCCh---------HHH
Confidence 4455556677777777665431 1233444566777777776 455555543321 023
Q ss_pred HHHHHHcCCHHHHHHHHHcC
Q 045083 242 LYMAVANGSAEIVAEILQNC 261 (556)
Q Consensus 242 L~~A~~~g~~~~v~~Ll~~~ 261 (556)
...|-.+|..+..+.+++.-
T Consensus 122 ~~~A~t~g~~~~a~~~~~~~ 141 (177)
T 3mkq_B 122 YAVAKANGDEAAASAFLEQA 141 (177)
T ss_dssp HHHHHHTTCHHHHHHHHHHT
T ss_pred HHHHHHcCcHHHHHHHHHHh
Confidence 45566677777777776543
No 121
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=33.75 E-value=32 Score=32.31 Aligned_cols=21 Identities=33% Similarity=0.528 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHHhccee
Q 045083 495 NFIMVSLLAMVVAFITGTYAV 515 (556)
Q Consensus 495 ~~~~~s~~~m~~af~~~~~~v 515 (556)
.+..+|++.+..+|+||+|-+
T Consensus 281 ~LTiit~IflP~T~IaGiyGM 301 (339)
T 4ev6_A 281 ILTMVTTIFAVPMWITGIYGM 301 (339)
T ss_dssp HHHHHHHHSSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhhccC
Confidence 355678888999999999987
No 122
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=31.44 E-value=1.1e+02 Score=19.76 Aligned_cols=33 Identities=24% Similarity=0.238 Sum_probs=15.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 045083 520 AGLSVATCVLGSSFILFAFANTFMLARGLYQRMF 553 (556)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 553 (556)
++|.+.+.+++...++ ....+...-.+||+|.+
T Consensus 11 p~wiIi~svl~GLllL-~li~~~LwK~GFFkR~~ 43 (54)
T 2knc_A 11 PIWWVLVGVLGGLLLL-TILVLAMWKVGFFKRNR 43 (54)
T ss_dssp CHHHHHHHHHHHHHHH-HHHHHHHHHHHHTTTTC
T ss_pred chHHHHHHHHHHHHHH-HHHHHHHHHcCcccCCC
Confidence 4555555555533222 22222233347887764
No 123
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=29.39 E-value=1.1e+02 Score=19.55 Aligned_cols=34 Identities=9% Similarity=0.182 Sum_probs=16.1
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 045083 519 SAGLSVATCVLGSSFILFAFANTFMLARGLYQRMF 553 (556)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 553 (556)
.++|.|.+.+++...++. ...+...-.+||+|.+
T Consensus 7 vp~WiIi~svl~GLLLL~-Lii~~LwK~GFFKR~~ 40 (54)
T 2l8s_A 7 VPLWVILLSAFAGLLLLM-LLILALWKIGFFKRPL 40 (54)
T ss_dssp CCTHHHHHHHHHHHHHHH-HHHHHHHHHHHTTSCC
T ss_pred CchHHHHHHHHHHHHHHH-HHHHHHHHcCcccCCC
Confidence 345666555555333322 2222233347887764
No 124
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=24.68 E-value=1.1e+02 Score=25.56 Aligned_cols=51 Identities=18% Similarity=0.175 Sum_probs=27.6
Q ss_pred cCCCcHhHHHHhcCCHHH-HHHHHhcCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhC
Q 045083 129 EEQNTPLHEAVRLRSVDV-VKILIKADPHVSYSANRNSETLLYMAVANGSAEIVAEILQNC 188 (556)
Q Consensus 129 ~~g~t~Lh~A~~~g~~~~-v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~ 188 (556)
.+-+.+.+.+...|+.+- ++.|.+.+.- .-+...|-.+|..+..+.+++..
T Consensus 90 g~~n~af~~~l~lGdv~~~i~lL~~~~r~---------~eA~~~A~t~g~~~~a~~~~~~~ 141 (177)
T 3mkq_B 90 EDFGSMLLNTFYNNSTKERSSIFAEGGSL---------PLAYAVAKANGDEAAASAFLEQA 141 (177)
T ss_dssp TCHHHHHHHHHHHTCHHHHHHHHHHTTCH---------HHHHHHHHHTTCHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHcCCHHHHHHHHHHCCCh---------HHHHHHHHHcCcHHHHHHHHHHh
Confidence 344555666666676554 4444432211 12344556677777777776654
No 125
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=23.61 E-value=71 Score=30.26 Aligned_cols=21 Identities=24% Similarity=0.596 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHhccee
Q 045083 495 NFIMVSLLAMVVAFITGTYAV 515 (556)
Q Consensus 495 ~~~~~s~~~m~~af~~~~~~v 515 (556)
.+..+|++.|..+|+||+|-+
T Consensus 305 ~LTiit~IflP~T~IaGiyGM 325 (363)
T 2iub_A 305 VLTIIATIFMPLTFIAGIYGM 325 (363)
T ss_dssp HHHHHHHHHHHHHHHTTSCC-
T ss_pred HHHHHHHHHHHHHHHHhhhcc
Confidence 355789999999999999987
Done!