Query 045086
Match_columns 522
No_of_seqs 119 out of 174
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 17:03:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045086.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045086hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hxt_A De novo protein OR329; 99.1 6.6E-09 2.2E-13 96.0 21.8 244 102-385 1-246 (252)
2 1xqr_A HSPBP1 protein; armadil 99.1 1E-08 3.6E-13 102.9 21.8 184 177-382 55-240 (296)
3 1wa5_B Importin alpha subunit; 98.8 5.7E-07 1.9E-11 94.2 23.7 262 80-381 233-511 (530)
4 4hxt_A De novo protein OR329; 98.8 4.1E-07 1.4E-11 83.8 19.7 220 79-326 19-241 (252)
5 1jdh_A Beta-catenin; beta-cate 98.8 4.5E-07 1.6E-11 93.1 20.8 294 79-412 77-408 (529)
6 3tpo_A Importin subunit alpha- 98.7 1.3E-06 4.6E-11 92.2 23.6 279 81-382 139-451 (529)
7 4db8_A Armadillo-repeat protei 98.7 7.3E-07 2.5E-11 83.2 19.2 236 105-380 14-251 (252)
8 3ul1_B Importin subunit alpha- 98.7 1.4E-06 4.6E-11 92.1 22.9 276 81-382 120-432 (510)
9 4db6_A Armadillo repeat protei 98.7 1E-06 3.5E-11 80.2 18.6 202 93-322 1-205 (210)
10 4db8_A Armadillo-repeat protei 98.7 3.3E-07 1.1E-11 85.6 15.7 215 79-321 29-246 (252)
11 1jdh_A Beta-catenin; beta-cate 98.7 1.4E-06 4.7E-11 89.6 21.6 268 78-383 33-342 (529)
12 2z6h_A Catenin beta-1, beta-ca 98.7 1.6E-06 5.6E-11 93.5 22.9 245 78-350 30-316 (644)
13 2z6h_A Catenin beta-1, beta-ca 98.7 1.4E-06 4.9E-11 94.0 21.8 222 98-349 9-234 (644)
14 3nmw_A APC variant protein; AR 98.6 1.5E-06 5E-11 89.3 20.0 274 76-383 46-337 (354)
15 2jdq_A Importin alpha-1 subuni 98.6 1.8E-06 6.3E-11 86.6 18.8 262 80-381 83-348 (450)
16 2jdq_A Importin alpha-1 subuni 98.6 1.3E-05 4.5E-10 80.3 24.5 260 80-380 168-443 (450)
17 1wa5_B Importin alpha subunit; 98.6 1.1E-05 3.9E-10 84.3 24.1 263 81-383 192-460 (530)
18 4b8j_A Importin subunit alpha- 98.5 1.4E-05 4.7E-10 83.4 24.2 262 80-380 92-358 (528)
19 4b8j_A Importin subunit alpha- 98.5 1.2E-05 4.1E-10 83.8 22.6 263 79-380 220-496 (528)
20 3nmz_A APC variant protein; pr 98.5 4.9E-06 1.7E-10 88.5 19.8 270 80-383 166-453 (458)
21 3now_A UNC-45 protein, SD10334 98.5 3.9E-06 1.3E-10 95.1 19.2 280 79-380 396-737 (810)
22 3nmz_A APC variant protein; pr 98.5 4.5E-05 1.6E-09 81.1 25.8 278 81-380 48-408 (458)
23 3tpo_A Importin subunit alpha- 98.4 3.7E-05 1.3E-09 81.3 22.2 255 88-381 103-365 (529)
24 2z6g_A B-catenin; FULL-length, 98.3 0.00024 8E-09 79.4 29.2 285 79-383 336-666 (780)
25 2z6g_A B-catenin; FULL-length, 98.3 1.6E-05 5.4E-10 88.8 19.0 221 99-349 146-370 (780)
26 3ul1_B Importin subunit alpha- 98.2 6.2E-05 2.1E-09 79.4 20.4 246 96-380 93-345 (510)
27 3nmw_A APC variant protein; AR 98.2 5E-05 1.7E-09 77.9 18.6 227 79-329 101-337 (354)
28 4db6_A Armadillo repeat protei 98.2 0.00011 3.8E-09 66.6 18.7 180 178-380 28-209 (210)
29 1xm9_A Plakophilin 1; armadill 98.1 0.0001 3.5E-09 76.9 19.3 186 104-309 3-196 (457)
30 1xm9_A Plakophilin 1; armadill 98.1 0.0013 4.3E-08 68.7 26.4 303 80-418 20-437 (457)
31 3grl_A General vesicular trans 97.9 0.00055 1.9E-08 75.9 19.6 256 78-351 38-323 (651)
32 1xqr_A HSPBP1 protein; armadil 97.8 0.0013 4.3E-08 66.0 18.4 194 76-296 51-249 (296)
33 3l6x_A Catenin delta-1; cateni 97.6 0.0031 1.1E-07 69.2 19.8 247 80-350 152-456 (584)
34 3now_A UNC-45 protein, SD10334 97.5 0.0029 1E-07 71.8 19.1 264 80-381 513-783 (810)
35 3opb_A SWI5-dependent HO expre 97.4 0.0023 7.8E-08 72.4 16.2 264 98-398 452-745 (778)
36 3l6x_A Catenin delta-1; cateni 97.4 0.0069 2.4E-07 66.4 18.9 189 101-309 46-246 (584)
37 3tt9_A Plakophilin-2; cell adh 96.8 0.019 6.5E-07 55.9 14.2 187 104-310 9-206 (233)
38 3opb_A SWI5-dependent HO expre 96.5 0.1 3.4E-06 59.2 19.4 274 79-380 351-683 (778)
39 3tt9_A Plakophilin-2; cell adh 96.3 0.038 1.3E-06 53.8 12.3 161 81-260 29-206 (233)
40 3grl_A General vesicular trans 96.1 0.15 5.3E-06 56.6 17.7 222 83-325 143-393 (651)
41 4gmo_A Putative uncharacterize 95.6 0.13 4.6E-06 56.5 14.5 194 79-282 51-261 (684)
42 3eg5_B Protein diaphanous homo 94.5 1.5 5.2E-05 45.4 17.9 191 206-405 67-271 (383)
43 2bnx_A Diaphanous protein homo 94.4 3.3 0.00011 42.9 20.1 187 207-403 6-207 (386)
44 2f31_A Diaphanous protein homo 94.3 0.97 3.3E-05 43.4 14.9 187 208-405 3-205 (233)
45 3dad_A FH1/FH2 domain-containi 91.9 3.6 0.00012 42.4 15.4 160 230-407 142-314 (339)
46 4fdd_A Transportin-1; heat rep 82.5 58 0.002 35.7 18.8 193 104-327 175-389 (852)
47 3dad_A FH1/FH2 domain-containi 80.8 18 0.00061 37.3 12.9 164 76-256 132-312 (339)
48 3eg5_B Protein diaphanous homo 76.1 75 0.0026 32.7 16.5 217 145-381 101-343 (383)
49 4gmo_A Putative uncharacterize 60.2 1.1E+02 0.0038 33.4 14.1 190 149-350 30-237 (684)
50 3ltj_A Alpharep-4; protein eng 58.6 94 0.0032 27.2 11.3 30 104-133 46-75 (201)
51 2vgl_A Adaptor protein complex 49.2 2.8E+02 0.0096 29.8 19.7 189 96-309 179-399 (621)
52 2i9c_A Hypothetical protein RP 44.2 15 0.0005 32.8 3.1 51 95-154 47-100 (123)
53 1qgr_A Protein (importin beta 43.6 3.3E+02 0.011 29.1 24.4 235 79-338 383-649 (876)
54 3ltm_A Alpha-REP4; protein eng 39.5 2E+02 0.0067 25.3 11.3 31 103-133 50-80 (211)
55 2f31_A Diaphanous protein homo 39.3 1E+02 0.0036 29.0 8.6 106 146-262 36-145 (233)
56 3ltj_A Alpharep-4; protein eng 38.4 74 0.0025 27.9 7.0 33 103-135 76-108 (201)
57 3ltm_A Alpha-REP4; protein eng 37.7 2.1E+02 0.0071 25.1 15.6 33 102-134 18-50 (211)
58 2bnx_A Diaphanous protein homo 28.6 4.8E+02 0.017 26.5 17.4 105 146-261 40-148 (386)
59 1oyz_A Hypothetical protein YI 27.5 3.6E+02 0.012 24.7 13.6 31 104-134 129-159 (280)
60 3kat_A Nacht, LRR and PYD doma 25.1 47 0.0016 28.7 3.1 42 306-349 55-96 (107)
61 1upk_A MO25 protein; transfera 24.8 48 0.0016 34.2 3.6 91 140-241 64-158 (341)
62 1ho8_A Vacuolar ATP synthase s 24.6 4E+02 0.014 28.5 10.8 139 182-321 292-471 (480)
No 1
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=99.14 E-value=6.6e-09 Score=95.96 Aligned_cols=244 Identities=16% Similarity=0.224 Sum_probs=196.4
Q ss_pred cCChHHHHHhhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcChHHHHHHHhhhhcCCCCChhHHHHHHH
Q 045086 102 LNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELLVQNIQRLSDADSDPDEMAAVYN 181 (522)
Q Consensus 102 l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~~~lLv~nL~RldE~~~~e~e~~gV~~ 181 (522)
+|+++.|+.+|.|+|.++...++..|..++..+. .....+++.+++..|++-|.. . + ..-..+
T Consensus 1 ~~~i~~L~~~L~~~~~~~~~~a~~~L~~l~~~~~---------~~~~~~~~~g~i~~L~~ll~~---~--~---~~v~~~ 63 (252)
T 4hxt_A 1 MNDVEKLVKLLTSTDSETQKEAARDLAEIASGPA---------SAIKAIVDAGGVEVLVKLLTS---T--D---SEVQKE 63 (252)
T ss_dssp CCHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCH---------HHHHHHHHTTHHHHHHHHTTC---S--C---HHHHHH
T ss_pred CCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCc---------HHHHHHHHCCCHHHHHHHHhC---C--C---HHHHHH
Confidence 4789999999999999999999999999987652 233566677899888887643 2 2 345567
Q ss_pred HHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChhhhhHHHHHHHHhcCChHHHHHhhhhchHHHHHHHHhhcc
Q 045086 182 TLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNSTANQKRLGQMNGVDVLLQAVAMYK 261 (522)
Q Consensus 182 ~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ~s~~nr~~~~~~dGiD~LL~~la~Yr 261 (522)
++..+-|+..-.|+....+. +.+.++.|++-++.. -..-+.+|...|+-|.+.++.++..+.+.+++..|++.+.
T Consensus 64 a~~~L~~l~~~~~~~~~~~~-~~~~i~~l~~ll~~~-~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~--- 138 (252)
T 4hxt_A 64 AARALANIASGPDEAIKAIV-DAGGVEVLVKLLTST-DSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLT--- 138 (252)
T ss_dssp HHHHHHHHTTSCHHHHHHHH-HTTHHHHHHHHTTCS-SHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT---
T ss_pred HHHHHHHHHcCChHHHHHHH-HCCCHHHHHHHHcCC-CHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHc---
Confidence 88888899886688777776 567899999988743 3455789999999999999999999999999999999885
Q ss_pred cCCCCCCcHHHHHHhHHHHHHHhhC-ChhhHHHHHHhhhHHHHHHHHhcch-hhhhhhHHHHHHHhcCCcchhhhHHhhh
Q 045086 262 SKDPKTSDEEEMLENLFDSLCCVLM-PLENKERFVKAEGVELMIIIMKQKK-SAYASAIRALDFAMTKYPPACERFVDVL 339 (522)
Q Consensus 262 krDP~~~eE~E~mENlFd~Lcs~L~-~~~nk~~Fl~~EGveLM~lmlkekk-~sr~~AlKvLD~Al~~~~~~C~~fVe~~ 339 (522)
+ ...+...+...+|+.+.. .+.++..+.+..+++.++.+++... ..+..|+.+|-.-..+++.++..+++.+
T Consensus 139 --~----~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~l~~~~ 212 (252)
T 4hxt_A 139 --S----TDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPTSAIKAIVDAG 212 (252)
T ss_dssp --C----SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSBHHHHHHHHHTT
T ss_pred --C----CCHHHHHHHHHHHHHHHcCCHHHHHHHHHCcCHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCC
Confidence 1 226688999999999987 5667789999999999999998764 6788889998887777788999999999
Q ss_pred chhhHHHhhhcCCCCcccccchhhhHHHHHHHHHHHHHHhccCCCc
Q 045086 340 GLKTAFAAFMGKIPVNKKNKKERYQEELEERLVSLIASLFGGILRG 385 (522)
Q Consensus 340 GLktlF~~FM~k~~~~k~~kk~~~~~e~eEhvisIiaSLlr~l~~~ 385 (522)
++..|..++... ..+.-++.+.+++.|..+-+..
T Consensus 213 ~i~~L~~ll~~~------------~~~v~~~a~~~L~~l~~~~~~~ 246 (252)
T 4hxt_A 213 GVEVLQKLLTST------------DSEVQKEAQRALENIKSGGWLE 246 (252)
T ss_dssp HHHHHHHGGGCS------------CHHHHHHHHHHHHHHHHTCBCC
T ss_pred CHHHHHHHHCCC------------cHHHHHHHHHHHHHHHcCCCcc
Confidence 999988877432 2356788999999999876543
No 2
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=99.08 E-value=1e-08 Score=102.87 Aligned_cols=184 Identities=14% Similarity=0.189 Sum_probs=152.4
Q ss_pred HHHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChhhhhHHHHHHHHhcCChHHHHHhhhhchHHHHHHH
Q 045086 177 AAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNSTANQKRLGQMNGVDVLLQA 256 (522)
Q Consensus 177 ~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ~s~~nr~~~~~~dGiD~LL~~ 256 (522)
+.-..+|..++++++ +.+.+..++. .+-++-|+.|+-...-...+.+|+.+|+.+.|+++.+|..+.+.+|+..|++.
T Consensus 55 e~k~~Al~~L~~lv~-~~dna~~~~~-~G~l~~Lv~~lL~s~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~L 132 (296)
T 1xqr_A 55 QEREGALELLADLCE-NMDNAADFCQ-LSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRL 132 (296)
T ss_dssp HHHHHHHHHHHHHHT-SHHHHHHHHH-TTHHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-ChhhHHHHHH-cCCHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHH
Confidence 344557888899888 7777777774 44567777744444556779999999999999999999999999999999999
Q ss_pred HhhcccCCCCCCcHHHHHHhHHHHHHHhhC-ChhhHHHHHHhhhHHHHHHHHhcc-hhhhhhhHHHHHHHhcCCcchhhh
Q 045086 257 VAMYKSKDPKTSDEEEMLENLFDSLCCVLM-PLENKERFVKAEGVELMIIIMKQK-KSAYASAIRALDFAMTKYPPACER 334 (522)
Q Consensus 257 la~YrkrDP~~~eE~E~mENlFd~Lcs~L~-~~~nk~~Fl~~EGveLM~lmlkek-k~sr~~AlKvLD~Al~~~~~~C~~ 334 (522)
+.. +| ..+..++..-+|+++.. .+++++.|....|+..++.+|+.. ...+..|..+|.+.+.+++..+..
T Consensus 133 L~~----~~----~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~~~~~~~~ 204 (296)
T 1xqr_A 133 LDR----DA----CDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGT 204 (296)
T ss_dssp HHH----CS----CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHH
T ss_pred Hcc----CC----CHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCChHHHHH
Confidence 963 22 25789999999999985 678889999999999999999976 467888999999998888899999
Q ss_pred HHhhhchhhHHHhhhcCCCCcccccchhhhHHHHHHHHHHHHHHhccC
Q 045086 335 FVDVLGLKTAFAAFMGKIPVNKKNKKERYQEELEERLVSLIASLFGGI 382 (522)
Q Consensus 335 fVe~~GLktlF~~FM~k~~~~k~~kk~~~~~e~eEhvisIiaSLlr~l 382 (522)
||+.+++++|+.++..+ +.+.-+|.+..+.+|++..
T Consensus 205 vv~~g~i~~Lv~LL~~~------------d~~v~~~al~aL~~l~~~~ 240 (296)
T 1xqr_A 205 LCSMGMVQQLVALVRTE------------HSPFHEHVLGALCSLVTDF 240 (296)
T ss_dssp HHHTTHHHHHHHHHTSC------------CSTHHHHHHHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHcCC------------ChhHHHHHHHHHHHHHhCC
Confidence 99999999999987532 2356789999999998863
No 3
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=98.82 E-value=5.7e-07 Score=94.18 Aligned_cols=262 Identities=13% Similarity=0.139 Sum_probs=198.7
Q ss_pred HHHHHhhhccccCC-CChHHHHhcCChHHHHHhhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcChHHH
Q 045086 80 HEELEKLKVLAGGP-ELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLEL 158 (522)
Q Consensus 80 d~~Ik~l~~La~~P-~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~~~l 158 (522)
..++..|..|+.++ ...+..+..|+++.|+.+|.|++.++...++..|..|++.. ++ .+..+++.+++..
T Consensus 233 ~~a~~~L~~L~~~~~~~~~~~~~~~~l~~L~~lL~~~d~~v~~~a~~~L~~L~~~~-----~~----~~~~~~~~~~v~~ 303 (530)
T 1wa5_B 233 RTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGP-----QE----AIQAVIDVRIPKR 303 (530)
T ss_dssp HHHHHHHHHHHCCSSSCCCHHHHGGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSC-----HH----HHHHHHHTTCHHH
T ss_pred HHHHHHHHHHhCCCCCCCcHHHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCC-----HH----HHHHHHhcCcHHH
Confidence 44566777788765 44556667899999999999999999999999999998653 11 3455667789999
Q ss_pred HHHHhhhhcCCCCChhHHHHHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChhhhhHHHHHHHHhcCCh
Q 045086 159 LVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNST 238 (522)
Q Consensus 159 Lv~nL~RldE~~~~e~e~~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ~s~ 238 (522)
|++.|. .. + ..-...++.++-|++.-.+.....+. +.+++++|+.-++.. -..-+..|...|+-|...++
T Consensus 304 Lv~lL~---~~--~---~~v~~~a~~~L~~l~~~~~~~~~~~~-~~~~l~~L~~lL~~~-~~~vr~~A~~aL~~l~~~~~ 373 (530)
T 1wa5_B 304 LVELLS---HE--S---TLVQTPALRAVGNIVTGNDLQTQVVI-NAGVLPALRLLLSSP-KENIKKEACWTISNITAGNT 373 (530)
T ss_dssp HHHGGG---CS--C---HHHHHHHHHHHHHHTTSCHHHHHHHH-HTTHHHHHHHHTTCS-CHHHHHHHHHHHHHHTTSCH
T ss_pred HHHHHC---CC--C---hhhHHHHHHHHHHHHcCCHHHHHHHH-HcchHHHHHHHHcCC-CHHHHHHHHHHHHHHHcCCH
Confidence 988875 22 2 34456678888899986777666555 467999999998765 23457788899999999888
Q ss_pred HHHHHhhhhchHHHHHHHHhhcccCCCCCCcHHHHHHhHHHHHHHhhC--Ch--hhHHHHHHhhhHHHHHHHHhcc-hhh
Q 045086 239 ANQKRLGQMNGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVLM--PL--ENKERFVKAEGVELMIIIMKQK-KSA 313 (522)
Q Consensus 239 ~nr~~~~~~dGiD~LL~~la~YrkrDP~~~eE~E~mENlFd~Lcs~L~--~~--~nk~~Fl~~EGveLM~lmlkek-k~s 313 (522)
.....+...+++..|++.+.. | ..+...+...+|+.+.. .+ ++...+.+..++..++.++... ...
T Consensus 374 ~~~~~~~~~~~l~~L~~lL~~-----~----~~~v~~~a~~aL~~l~~~~~~~~~~~~~l~~~~~l~~L~~ll~~~~~~v 444 (530)
T 1wa5_B 374 EQIQAVIDANLIPPLVKLLEV-----A----EYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRI 444 (530)
T ss_dssp HHHHHHHHTTCHHHHHHHHHH-----S----CHHHHHHHHHHHHHHHHHTTTCTHHHHHHHHTTCHHHHHHHTTTCCHHH
T ss_pred HHHHHHHHCCCHHHHHHHHhc-----C----CHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHCCCHHHHHHHHhCCCHHH
Confidence 888777778899999998852 1 34677788888888775 34 7788899999999999999865 356
Q ss_pred hhhhHHHHHHHhcCC-----------cchhhhHHhhhchhhHHHhhhcCCCCcccccchhhhHHHHHHHHHHHHHHhcc
Q 045086 314 YASAIRALDFAMTKY-----------PPACERFVDVLGLKTAFAAFMGKIPVNKKNKKERYQEELEERLVSLIASLFGG 381 (522)
Q Consensus 314 r~~AlKvLD~Al~~~-----------~~~C~~fVe~~GLktlF~~FM~k~~~~k~~kk~~~~~e~eEhvisIiaSLlr~ 381 (522)
+..|+.+|..-+..+ .+.|..|.+.+|+..|..+.-.. ..+.-++...||..+|+.
T Consensus 445 ~~~al~aL~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~L~~L~~~~------------~~~v~~~a~~il~~~~~~ 511 (530)
T 1wa5_B 445 IEVTLDALENILKMGEADKEARGLNINENADFIEKAGGMEKIFNCQQNE------------NDKIYEKAYKIIETYFGE 511 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHTTHHHHHHGGGGCS------------CHHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHhhhhhhhcccccccHHHHHHHHcCcHHHHHHHHcCC------------CHHHHHHHHHHHHHHCCc
Confidence 777887777665422 34799999999999998864321 134567889999999875
No 4
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=98.81 E-value=4.1e-07 Score=83.85 Aligned_cols=220 Identities=17% Similarity=0.276 Sum_probs=174.0
Q ss_pred HHHHHHhhhccccCC-CChHHHHhcCChHHHHHhhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcChHH
Q 045086 79 LHEELEKLKVLAGGP-ELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLE 157 (522)
Q Consensus 79 Ld~~Ik~l~~La~~P-~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~~~ 157 (522)
...++..|..++..+ +....+++.|+++.|+.+|.++|.++...++..|..++..+. + ....+++.+++.
T Consensus 19 ~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~-----~----~~~~~~~~~~i~ 89 (252)
T 4hxt_A 19 QKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPD-----E----AIKAIVDAGGVE 89 (252)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCH-----H----HHHHHHHTTHHH
T ss_pred HHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCh-----H----HHHHHHHCCCHH
Confidence 345677787777665 578889999999999999999999999999999999987531 1 234556778888
Q ss_pred HHHHHhhhhcCCCCChhHHHHHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChhhhhHHHHHHHHhcCC
Q 045086 158 LLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNS 237 (522)
Q Consensus 158 lLv~nL~RldE~~~~e~e~~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ~s 237 (522)
.|++-|. .. + ..-..+++.++-||....|+....+.. .+.++.|++-++... ..-+.+|...|+-|...+
T Consensus 90 ~l~~ll~---~~--~---~~v~~~a~~~L~~l~~~~~~~~~~~~~-~~~i~~L~~~l~~~~-~~~~~~a~~~L~~l~~~~ 159 (252)
T 4hxt_A 90 VLVKLLT---ST--D---SEVQKEAARALANIASGPDEAIKAIVD-AGGVEVLVKLLTSTD-SEVQKEAARALANIASGP 159 (252)
T ss_dssp HHHHHTT---CS--S---HHHHHHHHHHHHHHTTSCHHHHHHHHH-TTHHHHHHHHTTCSC-HHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHc---CC--C---HHHHHHHHHHHHHHHcCCHHHHHHHHH-CCCHHHHHHHHcCCC-HHHHHHHHHHHHHHHcCC
Confidence 8888775 22 2 345667899999999778888877774 678999998887543 445888999999999999
Q ss_pred hHHHHHhhhhchHHHHHHHHhhcccCCCCCCcHHHHHHhHHHHHHHhhC-ChhhHHHHHHhhhHHHHHHHHhcch-hhhh
Q 045086 238 TANQKRLGQMNGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVLM-PLENKERFVKAEGVELMIIIMKQKK-SAYA 315 (522)
Q Consensus 238 ~~nr~~~~~~dGiD~LL~~la~YrkrDP~~~eE~E~mENlFd~Lcs~L~-~~~nk~~Fl~~EGveLM~lmlkekk-~sr~ 315 (522)
+.++..+.+.+++..|++.+. +| ..+...+...+|+.+.. .++++..+.+..|++.++.+++... ..+.
T Consensus 160 ~~~~~~~~~~~~i~~L~~ll~-----~~----~~~v~~~a~~~L~~l~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~ 230 (252)
T 4hxt_A 160 DEAIKAIVDAGGVEVLVKLLT-----ST----DSEVQKEAARALANIASGPTSAIKAIVDAGGVEVLQKLLTSTDSEVQK 230 (252)
T ss_dssp HHHHHHHHHTTHHHHHHHHTT-----CS----CHHHHHHHHHHHHHHTTSBHHHHHHHHHTTHHHHHHHGGGCSCHHHHH
T ss_pred HHHHHHHHHCcCHHHHHHHHC-----CC----CHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHCCCcHHHHH
Confidence 999888888899999999885 11 24778888999998886 7788889999999999999998653 4566
Q ss_pred hhHHHHHHHhc
Q 045086 316 SAIRALDFAMT 326 (522)
Q Consensus 316 ~AlKvLD~Al~ 326 (522)
.|+.+|-.-..
T Consensus 231 ~a~~~L~~l~~ 241 (252)
T 4hxt_A 231 EAQRALENIKS 241 (252)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHc
Confidence 77777665544
No 5
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=98.77 E-value=4.5e-07 Score=93.15 Aligned_cols=294 Identities=16% Similarity=0.126 Sum_probs=198.4
Q ss_pred HHHHHHhhhccccCCCChHHHHhcCChHHHHHhhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcChHHH
Q 045086 79 LHEELEKLKVLAGGPELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLEL 158 (522)
Q Consensus 79 Ld~~Ik~l~~La~~P~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~~~l 158 (522)
...+...|..|+..|+.-..+++.|+++.|+.+|.+++.++...++..|..+...+. +. ...+++.+++..
T Consensus 77 ~~~a~~~L~~ls~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~-----~~----~~~i~~~g~i~~ 147 (529)
T 1jdh_A 77 ARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQE-----GA----KMAVRLAGGLQK 147 (529)
T ss_dssp HHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCT-----TH----HHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHcCchhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCc-----ch----HHHHHHcCCHHH
Confidence 346677788899999888888999999999999999999999999999999987541 12 234556688888
Q ss_pred HHHHhhhhcCCCCChhHHHHHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChhhhhHHHHHHHHhcCCh
Q 045086 159 LVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNST 238 (522)
Q Consensus 159 Lv~nL~RldE~~~~e~e~~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ~s~ 238 (522)
|++-|.. . +..- ...+.+.+-|+..-+++....++. .+.++.|++-++......-+..|..+|.-|-. ++
T Consensus 148 L~~ll~~---~--~~~~---~~~~~~~L~~la~~~~~~~~~i~~-~~~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~-~~ 217 (529)
T 1jdh_A 148 MVALLNK---T--NVKF---LAITTDCLQILAYGNQESKLIILA-SGGPQALVNIMRTYTYEKLLWTTSRVLKVLSV-CS 217 (529)
T ss_dssp HHHGGGC---C--CHHH---HHHHHHHHHHHHTTCHHHHHHHHH-TTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTT-ST
T ss_pred HHHHHhc---C--CHHH---HHHHHHHHHHHHhCCHHHHHHHHH-CCCHHHHHHHHHhCChHHHHHHHHHHHHHHhc-Cc
Confidence 8888753 2 3322 233455666877766777776764 46688888777655433334446677777765 67
Q ss_pred HHHHHhhhhchHHHHHHHHhhc---------------ccCCCC---------------CCcHHHHHHhHHHHHHHhhCC-
Q 045086 239 ANQKRLGQMNGVDVLLQAVAMY---------------KSKDPK---------------TSDEEEMLENLFDSLCCVLMP- 287 (522)
Q Consensus 239 ~nr~~~~~~dGiD~LL~~la~Y---------------rkrDP~---------------~~eE~E~mENlFd~Lcs~L~~- 287 (522)
.++..+.+.++|+.|++.+..- -+..|. ..+..+..++...+|+.+-..
T Consensus 218 ~~~~~~~~~g~~~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~L~~~~ 297 (529)
T 1jdh_A 218 SNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNN 297 (529)
T ss_dssp THHHHHHHTTHHHHHHTTTTSSCHHHHHHHHHHHHHHHTTCTTCSCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTTC
T ss_pred ccHHHHHHCCCHHHHHHHHhCCChHHHHHHHHHHHHHhcCChhhHHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHhcCC
Confidence 7888887778888887655321 000010 123345667777788877664
Q ss_pred hhhHHHHHHhhhHHHHHHHHhcc---hhhhhhhHHHHHHHhcCCcc---hhhhHHhhhchhhHHHhhhcCCCCcccccch
Q 045086 288 LENKERFVKAEGVELMIIIMKQK---KSAYASAIRALDFAMTKYPP---ACERFVDVLGLKTAFAAFMGKIPVNKKNKKE 361 (522)
Q Consensus 288 ~~nk~~Fl~~EGveLM~lmlkek---k~sr~~AlKvLD~Al~~~~~---~C~~fVe~~GLktlF~~FM~k~~~~k~~kk~ 361 (522)
++++..|.+..|++.++.+++.. ...+..|+++|-+-..+.+. ++..+++.+|+..|..++...
T Consensus 298 ~~~~~~~~~~~~v~~L~~ll~~~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~i~~~~~i~~L~~lL~~~---------- 367 (529)
T 1jdh_A 298 YKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP---------- 367 (529)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTCHHHHHHTTSTT----------
T ss_pred HHHHHHHHHcCChHHHHHHHHccCCHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHcCChhHHHHHhccc----------
Confidence 67999999999999999999753 35678889988887555433 577899999999988877432
Q ss_pred hhhHHHHHHHHHHHHHHhccCCCcch-HHHHHHHhhhhhhHHHHHHHHHHHH
Q 045086 362 RYQEELEERLVSLIASLFGGILRGSR-RERLLSKFIENECEKIDRLMELYMR 412 (522)
Q Consensus 362 ~~~~e~eEhvisIiaSLlr~l~~~s~-r~RlLaKFvE~d~EKvdRL~eL~~~ 412 (522)
...+.-...++++..+.. ++. + ..|++.+ =+..|+++-..
T Consensus 368 -~~~~v~~~a~~~l~nl~~----~~~~~----~~~~~~~--~i~~L~~ll~~ 408 (529)
T 1jdh_A 368 -SHWPLIKATVGLIRNLAL----CPANH----APLREQG--AIPRLVQLLVR 408 (529)
T ss_dssp -CCHHHHHHHHHHHHHHTT----SGGGH----HHHHHTT--HHHHHHHHHHH
T ss_pred -cchHHHHHHHHHHHHHhc----Chhhh----HHHHHcC--CHHHHHHHHHH
Confidence 011334455666666554 333 3 2344333 35566666543
No 6
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=98.74 E-value=1.3e-06 Score=92.25 Aligned_cols=279 Identities=12% Similarity=0.144 Sum_probs=183.7
Q ss_pred HHHHhhhccccCC-CChHHHHhcCChHHHHHhhcCCCchHHHHHHHHhhhhcccccccC----CCchHHHHHHHHHhcC-
Q 045086 81 EELEKLKVLAGGP-ELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLED----NDEPARVLVDALIENN- 154 (522)
Q Consensus 81 ~~Ik~l~~La~~P-~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e----~~e~~~~Lv~aL~~~~- 154 (522)
++...|..||.+. +.-..+++.|+++.|+.||.++|.++...++..|..|.-...... .......|+..|-..+
T Consensus 139 ~Aa~aL~nia~~~~~~~~~vv~~Gaip~Lv~LL~s~~~~v~e~A~~aL~nLa~~~~~~r~~i~~~g~i~~Ll~lL~~~~~ 218 (529)
T 3tpo_A 139 ESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGAGSAFRDLVIKHGAIDPLLALLAVPDL 218 (529)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHTTCSSCG
T ss_pred HHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhccCHHHHHHHHHcCCcHHHHHHHhccch
Confidence 4566777787765 445678899999999999999999999999999998864321100 0011222222221110
Q ss_pred ------hHH---HHHHHhhhhcCCCCC----------------hhHHHHHHHHHHHHHhhhccChhHHHHHhhhhchHHH
Q 045086 155 ------VLE---LLVQNIQRLSDADSD----------------PDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRW 209 (522)
Q Consensus 155 ------~~~---lLv~nL~RldE~~~~----------------e~e~~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~w 209 (522)
+.. ..+.|+.+-...... ..+.....++...+=|+.+-.++....++ ..++++.
T Consensus 219 ~~~~~~~~~~a~~~L~nl~~~~~~~~~~~~~~~~lp~L~~LL~~~~~~v~~~a~~aL~~l~~~~~~~~~~v~-~~g~i~~ 297 (529)
T 3tpo_A 219 STLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVV-KKGVVPQ 297 (529)
T ss_dssp GGSCHHHHHHHHHHHHHHHCCCTTCCCHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHHH-TTTCHHH
T ss_pred hHhHHHHHHHHHHHHHHHHhcccchhhHHHHhhHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhhhhhHHHHH-hccchHH
Confidence 011 112222222111000 01112233455555566664444444333 5677888
Q ss_pred HHhhccccCCChhhhhHHHHHHHHhcCChHHHHHhhhhchHHHHHHHHhhcccCCCCCCcHHHHHHhHHHHHHHhhC-Ch
Q 045086 210 LLGKIKVREFDSNKQYASEILAILLQNSTANQKRLGQMNGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVLM-PL 288 (522)
Q Consensus 210 LL~Ri~~k~~d~Nk~YAsEiLaILLQ~s~~nr~~~~~~dGiD~LL~~la~YrkrDP~~~eE~E~mENlFd~Lcs~L~-~~ 288 (522)
|..-+... -..-+.+|...|.-|+.+++.++..+...+++..|.+.+. +| ..+.-.+..-+|+.+.. .+
T Consensus 298 Lv~lL~~~-~~~v~~~a~~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~-----~~----~~~i~~~a~~aL~nl~~~~~ 367 (529)
T 3tpo_A 298 LVKLLGAT-ELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLT-----NP----KTNIQKEATWTMSNITAGRQ 367 (529)
T ss_dssp HHHHHTCS-CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHHHTT-----CS----SHHHHHHHHHHHHHHHTSCH
T ss_pred HHHHhcCC-ChhHHHHHHHHHHHHHccchHHHHHHhhcccHHHHHHHHc-----CC----CHHHHHHHHHHHHHHhcccH
Confidence 88777643 2334678888999999999999988888899999998874 22 23566778888888876 56
Q ss_pred hhHHHHHHhhhHHHHHHHHhcch-hhhhhhHHHHHHHhc-CCcchhhhHHhhhchhhHHHhhhcCCCCcccccchhhhHH
Q 045086 289 ENKERFVKAEGVELMIIIMKQKK-SAYASAIRALDFAMT-KYPPACERFVDVLGLKTAFAAFMGKIPVNKKNKKERYQEE 366 (522)
Q Consensus 289 ~nk~~Fl~~EGveLM~lmlkekk-~sr~~AlKvLD~Al~-~~~~~C~~fVe~~GLktlF~~FM~k~~~~k~~kk~~~~~e 366 (522)
..+..+.+.-++..++.+++... ..+..|..+|-...+ +.+..|..+|+.++++.|..++-- .+.+
T Consensus 368 ~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl~~~~~~~~~~~l~~~g~i~~L~~LL~~------------~d~~ 435 (529)
T 3tpo_A 368 DQIQQVVNHGLVPFLVGVLSKADFKTQKAAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSA------------KDTK 435 (529)
T ss_dssp HHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHGGGC------------SCHH
T ss_pred HHHHHHHhcCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCcCHHHHHHHhcC------------CCHH
Confidence 67778888889999999998774 456777777766554 457889999999999999998842 2346
Q ss_pred HHHHHHHHHHHHhccC
Q 045086 367 LEERLVSLIASLFGGI 382 (522)
Q Consensus 367 ~eEhvisIiaSLlr~l 382 (522)
.-.+++..+..+++.-
T Consensus 436 i~~~~L~aL~nil~~~ 451 (529)
T 3tpo_A 436 IIQVILDAISNIFQAA 451 (529)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 6778888888888743
No 7
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=98.74 E-value=7.3e-07 Score=83.22 Aligned_cols=236 Identities=14% Similarity=0.160 Sum_probs=180.1
Q ss_pred hHHHHHhhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcChHHHHHHHhhhhcCCCCChhHHHHHHHHHH
Q 045086 105 IPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELLVQNIQRLSDADSDPDEMAAVYNTLA 184 (522)
Q Consensus 105 v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~~~lLv~nL~RldE~~~~e~e~~gV~~~L~ 184 (522)
++.+..+|.++|.++...++..|..+...+ .+. ...+++.+++..|++-|..- + ..-...++.
T Consensus 14 ~~~~~~~L~s~~~~~~~~a~~~L~~~l~~~-----~~~----~~~~~~~g~i~~L~~lL~~~-----~---~~v~~~a~~ 76 (252)
T 4db8_A 14 LPQMTQQLNSDDMQEQLSATRKFSQILSDG-----NEQ----IQAVIDAGALPALVQLLSSP-----N---EQILQEALW 76 (252)
T ss_dssp HHHHHHHHHSSCSSHHHHHHHHHHHHHHHH-----HHH----HHHHHHTTHHHHHHHGGGCS-----C---HHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHcCC-----Cch----HHHHHHcCcHHHHHHHHcCC-----C---HHHHHHHHH
Confidence 566778999999999999999996654432 122 35567779999999887532 2 334567788
Q ss_pred HHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChhhhhHHHHHHHHhcCChHHHHHhhhhchHHHHHHHHhhcccCC
Q 045086 185 TIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNSTANQKRLGQMNGVDVLLQAVAMYKSKD 264 (522)
Q Consensus 185 iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ~s~~nr~~~~~~dGiD~LL~~la~YrkrD 264 (522)
++-|+..-.|+....+. +.+.++.|++-++.. -..-+..|...|+-|..+++.....+.+.+||..|++.+. +
T Consensus 77 ~L~~l~~~~~~~~~~i~-~~g~i~~L~~lL~~~-~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~-----~ 149 (252)
T 4db8_A 77 ALSNIASGGNEQIQAVI-DAGALPALVQLLSSP-NEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS-----S 149 (252)
T ss_dssp HHHHHTTSCHHHHHHHH-HTTHHHHHHHGGGCS-CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGG-----C
T ss_pred HHHHHhcCCHHHHHHHH-HcCCHHHHHHHHcCC-CHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHHh-----C
Confidence 88899887788777666 567899999988763 2345778999999999877766577888899999999884 2
Q ss_pred CCCCcHHHHHHhHHHHHHHhhC-ChhhHHHHHHhhhHHHHHHHHhcch-hhhhhhHHHHHHHhcCCcchhhhHHhhhchh
Q 045086 265 PKTSDEEEMLENLFDSLCCVLM-PLENKERFVKAEGVELMIIIMKQKK-SAYASAIRALDFAMTKYPPACERFVDVLGLK 342 (522)
Q Consensus 265 P~~~eE~E~mENlFd~Lcs~L~-~~~nk~~Fl~~EGveLM~lmlkekk-~sr~~AlKvLD~Al~~~~~~C~~fVe~~GLk 342 (522)
| ..+..++...+|+.+.. .++++..+.+..++..++.+++... ..+..|+.+|-.-..+++.++..+++.+|+.
T Consensus 150 ~----~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~ 225 (252)
T 4db8_A 150 P----NEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALE 225 (252)
T ss_dssp S----CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHH
T ss_pred C----CHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHH
Confidence 2 34778899999999986 5678888999999999999998763 5688888888887777788999999999998
Q ss_pred hHHHhhhcCCCCcccccchhhhHHHHHHHHHHHHHHhc
Q 045086 343 TAFAAFMGKIPVNKKNKKERYQEELEERLVSLIASLFG 380 (522)
Q Consensus 343 tlF~~FM~k~~~~k~~kk~~~~~e~eEhvisIiaSLlr 380 (522)
.|..++... ..+.-++.+.++..|.+
T Consensus 226 ~L~~ll~~~------------~~~v~~~A~~~L~~l~~ 251 (252)
T 4db8_A 226 KLEQLQSHE------------NEKIQKEAQEALEKLQS 251 (252)
T ss_dssp HHHTTTTCS------------SSHHHHTHHHHHHTTC-
T ss_pred HHHHHhCCC------------CHHHHHHHHHHHHHHhc
Confidence 888877532 12445667777776654
No 8
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=98.72 E-value=1.4e-06 Score=92.10 Aligned_cols=276 Identities=13% Similarity=0.118 Sum_probs=181.4
Q ss_pred HHHHhhhccccC-CCChHHHHhcCChHHHHHhhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcChHHHH
Q 045086 81 EELEKLKVLAGG-PELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELL 159 (522)
Q Consensus 81 ~~Ik~l~~La~~-P~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~~~lL 159 (522)
++...|..||.. |+.=..+|+.|+++.|+.||.++|.++...++..|..|.-.. + ..-+.+++.+++..|
T Consensus 120 ~Aa~aL~nias~~~e~~~~vv~~GaIp~Lv~lL~s~~~~v~e~A~~aL~nLa~d~------~---~~r~~v~~~G~i~~L 190 (510)
T 3ul1_B 120 ESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDG------S---AFRDLVIKHGAIDPL 190 (510)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTC------H---HHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCC------H---HHHHHHHHcCChHHH
Confidence 566777878654 566677899999999999999999999999999999986432 1 133556677888888
Q ss_pred HHHhhhhcCCCCChhHHHHHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChhhhhHHHHHHHHhcCChH
Q 045086 160 VQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNSTA 239 (522)
Q Consensus 160 v~nL~RldE~~~~e~e~~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ~s~~ 239 (522)
+.-|..-+. .......+.++...+-|++.-..... .+....++++.|.+-++.. ...-+.+|+..|+-|..++.+
T Consensus 191 l~lL~~~~~---~~~~~~~~~~a~~~L~nl~~~~~~~~-~~~~~~~~lp~L~~LL~~~-~~~v~~~A~~aL~~L~~~~~~ 265 (510)
T 3ul1_B 191 LALLAVPDL---STLACGYLRNLTWTLSNLCRNKNPAP-PLDAVEQILPTLVRLLHHN-DPEVLADSCWAISYLTDGPNE 265 (510)
T ss_dssp HHHTCSSCG---GGSCHHHHHHHHHHHHHHHCCCSSCC-CHHHHHHHHHHHHHHTTCS-CHHHHHHHHHHHHHHTSSCHH
T ss_pred HHHHHhccc---hhhhHHHHHHHHHHHHHHhhcccchh-HHHHHHhHHHHHHHHHhcC-CHHHHHHHHHHHHHHhhchhh
Confidence 887754322 11123345566667777775332111 1122234677776666532 334566777778888877777
Q ss_pred HHHHhhhhchHHHHHHHHhh---------------cccCCC------------------CCCcHHHHHHhHHHHHHHhhC
Q 045086 240 NQKRLGQMNGVDVLLQAVAM---------------YKSKDP------------------KTSDEEEMLENLFDSLCCVLM 286 (522)
Q Consensus 240 nr~~~~~~dGiD~LL~~la~---------------YrkrDP------------------~~~eE~E~mENlFd~Lcs~L~ 286 (522)
+...+...+++..|.+.+.. .-..++ -.....+.-++..-+|+.+..
T Consensus 266 ~~~~i~~~g~i~~Lv~lL~~~~~~v~~~al~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~~~~~~v~~~A~~aL~nl~a 345 (510)
T 3ul1_B 266 RIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITA 345 (510)
T ss_dssp HHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGCC-CTTCSSHHHHHHHHHHHHHHTT
T ss_pred hHHHHHhcccchhhhhhhcCCChhhhhHHHHHHHHhhcCCHHHHHHHhhccchHHHHHHhcCCCHHHHHHHHHHHHHHHc
Confidence 76666655666666554421 000000 011123445566667776664
Q ss_pred -ChhhHHHHHHhhhHHHHHHHHhcch-hhhhhhHHHHHHHhc-CCcchhhhHHhhhchhhHHHhhhcCCCCcccccchhh
Q 045086 287 -PLENKERFVKAEGVELMIIIMKQKK-SAYASAIRALDFAMT-KYPPACERFVDVLGLKTAFAAFMGKIPVNKKNKKERY 363 (522)
Q Consensus 287 -~~~nk~~Fl~~EGveLM~lmlkekk-~sr~~AlKvLD~Al~-~~~~~C~~fVe~~GLktlF~~FM~k~~~~k~~kk~~~ 363 (522)
.+.++..+.+.-++..++.+++..- ..+..|..+|-.... +.+..|..+|+.++++.|..++-. .
T Consensus 346 ~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~Nl~~~~~~~~~~~L~~~g~i~~L~~LL~~------------~ 413 (510)
T 3ul1_B 346 GRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSA------------K 413 (510)
T ss_dssp SCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHTTCHHHHHHGGGC------------S
T ss_pred CcHHHHHHHHhcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHhcC------------C
Confidence 4566777888888999999998763 456666666655444 457789999999999999998742 2
Q ss_pred hHHHHHHHHHHHHHHhccC
Q 045086 364 QEELEERLVSLIASLFGGI 382 (522)
Q Consensus 364 ~~e~eEhvisIiaSLlr~l 382 (522)
+.+...+++..+..+++.-
T Consensus 414 d~~i~~~~L~aL~nil~~~ 432 (510)
T 3ul1_B 414 DTKIIQVILDAISNIFQAA 432 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 3466788889999988754
No 9
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=98.70 E-value=1e-06 Score=80.19 Aligned_cols=202 Identities=15% Similarity=0.161 Sum_probs=150.8
Q ss_pred CCC-hHHHHhcCChHHHHHhhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcChHHHHHHHhhhhcCCCC
Q 045086 93 PEL-YPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELLVQNIQRLSDADS 171 (522)
Q Consensus 93 P~L-Yp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~~~lLv~nL~RldE~~~ 171 (522)
|+. ||-+-..|..+.|+.||.|+|.++...++..|..++..+ ++ ....+++.+++..|++-|.. .
T Consensus 1 ~~~~~~~~~~~~~~~~l~~LL~s~~~~v~~~a~~~L~~l~~~~-----~~----~~~~i~~~g~i~~L~~lL~~---~-- 66 (210)
T 4db6_A 1 MRGSHHHHHHGSELPQMVQQLNSPDQQELQSALRKLSQIASGG-----NE----QIQAVIDAGALPALVQLLSS---P-- 66 (210)
T ss_dssp ------------CHHHHHHHTTCSCHHHHHHHHHHHHHHHTSC-----HH----HHHHHHHTTHHHHHHHHTTC---S--
T ss_pred CCCccccccccchhHHHHHHhcCCCHHHHHHHHHHHHHHHcCC-----HH----HHHHHHHcCCHHHHHHHHcC---C--
Confidence 444 788888999999999999999999999999999998543 11 23566677899988888742 1
Q ss_pred ChhHHHHHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChhhhhHHHHHHHHhcCChHHHHHhhhhchHH
Q 045086 172 DPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNSTANQKRLGQMNGVD 251 (522)
Q Consensus 172 ~e~e~~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ~s~~nr~~~~~~dGiD 251 (522)
++ .-...++..+-|+..-.++....+. +.+.++.|++-++... ..-+..|.-.|+-|..+++.++..+.+.++|.
T Consensus 67 ~~---~v~~~a~~~L~~l~~~~~~~~~~i~-~~g~i~~L~~lL~~~~-~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~ 141 (210)
T 4db6_A 67 NE---QILQEALWALSNIASGGNEQIQAVI-DAGALPALVQLLSSPN-EQILQEALWALSNIASGGNEQIQAVIDAGALP 141 (210)
T ss_dssp CH---HHHHHHHHHHHHHTTSCHHHHHHHH-HTTCHHHHHHHTTCSC-HHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHH
T ss_pred CH---HHHHHHHHHHHHHhcCCcHHHHHHH-HCCCHHHHHHHHcCCc-HHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHH
Confidence 22 3455678888899876777777666 5678999999887652 34477899999999999999988888889999
Q ss_pred HHHHHHhhcccCCCCCCcHHHHHHhHHHHHHHhhCC-hhhHHHHHHhhhHHHHHHHHhcc-hhhhhhhHHHHH
Q 045086 252 VLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVLMP-LENKERFVKAEGVELMIIIMKQK-KSAYASAIRALD 322 (522)
Q Consensus 252 ~LL~~la~YrkrDP~~~eE~E~mENlFd~Lcs~L~~-~~nk~~Fl~~EGveLM~lmlkek-k~sr~~AlKvLD 322 (522)
.|++.+.. | ..+..++...+|+.+... ++++..+.+..|++.++.+++.. ...+..|..+|.
T Consensus 142 ~L~~ll~~-----~----~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~aL~ 205 (210)
T 4db6_A 142 ALVQLLSS-----P----NEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHENEKIQKEAQEALE 205 (210)
T ss_dssp HHHHHTTC-----S----CHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHH
T ss_pred HHHHHHcC-----C----CHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 99999852 2 357788999999998876 88999999999999999999865 345666666554
No 10
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=98.70 E-value=3.3e-07 Score=85.56 Aligned_cols=215 Identities=19% Similarity=0.227 Sum_probs=165.2
Q ss_pred HHHHHHhh-hccccCCCChHHHHhcCChHHHHHhhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcChHH
Q 045086 79 LHEELEKL-KVLAGGPELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLE 157 (522)
Q Consensus 79 Ld~~Ik~l-~~La~~P~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~~~ 157 (522)
...+++.| ..++..++-...+++.|+++.|+.+|.|++.++...++..|..++..+. + ....+++.+++.
T Consensus 29 ~~~a~~~L~~~l~~~~~~~~~~~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~-----~----~~~~i~~~g~i~ 99 (252)
T 4db8_A 29 QLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGN-----E----QIQAVIDAGALP 99 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCH-----H----HHHHHHHTTHHH
T ss_pred HHHHHHHHHHHHcCCCchHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCH-----H----HHHHHHHcCCHH
Confidence 44566677 4566666667889999999999999999999999999999999986431 1 235566778899
Q ss_pred HHHHHhhhhcCCCCChhHHHHHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChhhhhHHHHHHHHhcCC
Q 045086 158 LLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNS 237 (522)
Q Consensus 158 lLv~nL~RldE~~~~e~e~~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ~s 237 (522)
.|++-|.. . + ..-..+++.++-||..-.+.....+. +.+.++.|++-++.. -..-+.+|...|+-|..++
T Consensus 100 ~L~~lL~~---~--~---~~v~~~a~~~L~~l~~~~~~~~~~~~-~~~~i~~L~~lL~~~-~~~v~~~a~~~L~~l~~~~ 169 (252)
T 4db8_A 100 ALVQLLSS---P--N---EQILQEALWALSNIASGGNEQIQAVI-DAGALPALVQLLSSP-NEQILQEALWALSNIASGG 169 (252)
T ss_dssp HHHHGGGC---S--C---HHHHHHHHHHHHHHTTSCHHHHHHHH-HTTHHHHHHHGGGCS-CHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHcC---C--C---HHHHHHHHHHHHHhhcCCchHHHHHH-HCCCHHHHHHHHhCC-CHHHHHHHHHHHHHHHcCC
Confidence 89888754 2 2 24566788888898874444435454 677999999999654 2234778999999999999
Q ss_pred hHHHHHhhhhchHHHHHHHHhhcccCCCCCCcHHHHHHhHHHHHHHhh-CChhhHHHHHHhhhHHHHHHHHhcch-hhhh
Q 045086 238 TANQKRLGQMNGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVL-MPLENKERFVKAEGVELMIIIMKQKK-SAYA 315 (522)
Q Consensus 238 ~~nr~~~~~~dGiD~LL~~la~YrkrDP~~~eE~E~mENlFd~Lcs~L-~~~~nk~~Fl~~EGveLM~lmlkekk-~sr~ 315 (522)
+.++..+.+.++|..|++.+. +| ..+..++...+|+.+. ..++++..+.+..|++.++.+++... ..+.
T Consensus 170 ~~~~~~~~~~~~i~~L~~ll~-----~~----~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~v~~ 240 (252)
T 4db8_A 170 NEQIQAVIDAGALPALVQLLS-----SP----NEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHENEKIQK 240 (252)
T ss_dssp HHHHHHHHHTTCHHHHHHGGG-----CS----SHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHTTTTCSSSHHHH
T ss_pred hHHHHHHHHCCCHHHHHHHHC-----CC----CHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhCCCCHHHHH
Confidence 999988888899999999885 22 3567889999999988 47788999999999999999988753 4556
Q ss_pred hhHHHH
Q 045086 316 SAIRAL 321 (522)
Q Consensus 316 ~AlKvL 321 (522)
.|..+|
T Consensus 241 ~A~~~L 246 (252)
T 4db8_A 241 EAQEAL 246 (252)
T ss_dssp THHHHH
T ss_pred HHHHHH
Confidence 665554
No 11
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=98.70 E-value=1.4e-06 Score=89.58 Aligned_cols=268 Identities=13% Similarity=0.128 Sum_probs=191.1
Q ss_pred hHHHHHHhhhccccCCCChHHHHhc-CChHHHHHhhcC-CCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcCh
Q 045086 78 DLHEELEKLKVLAGGPELYPDVVNL-NVIPSILGLLSH-DNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNV 155 (522)
Q Consensus 78 dLd~~Ik~l~~La~~P~LYp~~v~l-~~v~sL~~LLsH-eNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~ 155 (522)
-...++..|..|+..++--..++.. |+++.|+.+|.+ ++.++...++..|..|+..+ + ....+++.++
T Consensus 33 v~~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~~~------~----~~~~i~~~g~ 102 (529)
T 1jdh_A 33 VVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHR------E----GLLAIFKSGG 102 (529)
T ss_dssp HHHHHHHHHHHHHTSHHHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSH------H----HHHHHHHTTH
T ss_pred HHHHHHHHHHHHHcCCccHHHHHhCcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCc------h----hHHHHHHcCC
Confidence 3567788888899887754455554 899999999965 58999999999999987643 1 2355566788
Q ss_pred HHHHHHHhhhhcCCCCChhHHHHHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChhhhhHHHHHHHHhc
Q 045086 156 LELLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQ 235 (522)
Q Consensus 156 ~~lLv~nL~RldE~~~~e~e~~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ 235 (522)
+..|++-|.. . + ..-...++..+-|++...+.....++ +.+.++-|++-++... .+-+..|...|..|..
T Consensus 103 i~~L~~lL~~---~--~---~~v~~~a~~~L~~l~~~~~~~~~~i~-~~g~i~~L~~ll~~~~-~~~~~~~~~~L~~la~ 172 (529)
T 1jdh_A 103 IPALVKMLGS---P--V---DSVLFYAITTLHNLLLHQEGAKMAVR-LAGGLQKMVALLNKTN-VKFLAITTDCLQILAY 172 (529)
T ss_dssp HHHHHHHTTC---S--C---HHHHHHHHHHHHHHHHHCTTHHHHHH-HHTHHHHHHHGGGCCC-HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcC---C--C---HHHHHHHHHHHHHHhcCCcchHHHHH-HcCCHHHHHHHHhcCC-HHHHHHHHHHHHHHHh
Confidence 8888887642 2 2 34567788888898876555555444 5678888888887532 2335677789999998
Q ss_pred CChHHHHHhhhhchHHHHHHHHhhcccCCCCCCcHHHHHHhHHHHHHHhhCChhhHHHHHHhhhHHHHHHHHhcch----
Q 045086 236 NSTANQKRLGQMNGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVLMPLENKERFVKAEGVELMIIIMKQKK---- 311 (522)
Q Consensus 236 ~s~~nr~~~~~~dGiD~LL~~la~YrkrDP~~~eE~E~mENlFd~Lcs~L~~~~nk~~Fl~~EGveLM~lmlkekk---- 311 (522)
++++++..+...+|+..|++.+..+ +| +...+.+..+|+.+-..++++..+++..|++.++.+++...
T Consensus 173 ~~~~~~~~i~~~~~i~~L~~ll~~~---~~-----~~~~~~a~~~L~~l~~~~~~~~~~~~~g~~~~L~~ll~~~~~~~~ 244 (529)
T 1jdh_A 173 GNQESKLIILASGGPQALVNIMRTY---TY-----EKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLV 244 (529)
T ss_dssp TCHHHHHHHHHTTHHHHHHHHHHHC---CC-----HHHHHHHHHHHHHHTTSTTHHHHHHHTTHHHHHHTTTTSSCHHHH
T ss_pred CCHHHHHHHHHCCCHHHHHHHHHhC---Ch-----HHHHHHHHHHHHHHhcCcccHHHHHHCCCHHHHHHHHhCCChHHH
Confidence 8999999999999999999988643 22 34566777777777788999999999888988877776531
Q ss_pred ------------------------------------hhhhhhHHHHHHHhcCCcchhhhHHhhhchhhHHHhhhcCCCCc
Q 045086 312 ------------------------------------SAYASAIRALDFAMTKYPPACERFVDVLGLKTAFAAFMGKIPVN 355 (522)
Q Consensus 312 ------------------------------------~sr~~AlKvLD~Al~~~~~~C~~fVe~~GLktlF~~FM~k~~~~ 355 (522)
..+..|..+|-+-..+++.++..+++.+|+..|..++....
T Consensus 245 ~~a~~~L~~l~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v~~L~~ll~~~~--- 321 (529)
T 1jdh_A 245 QNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAG--- 321 (529)
T ss_dssp HHHHHHHHHHHTTCTTCSCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTTCHHHHHHHHHTTHHHHHHHHHHHHT---
T ss_pred HHHHHHHHHHhcCChhhHHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCChHHHHHHHHccC---
Confidence 11222333333332334578999999999999998886421
Q ss_pred ccccchhhhHHHHHHHHHHHHHHhccCC
Q 045086 356 KKNKKERYQEELEERLVSLIASLFGGIL 383 (522)
Q Consensus 356 k~~kk~~~~~e~eEhvisIiaSLlr~l~ 383 (522)
...+.-+..+..+.+|..+.+
T Consensus 322 -------~~~~v~~~a~~~L~nl~~~~~ 342 (529)
T 1jdh_A 322 -------DREDITEPAICALRHLTSRHQ 342 (529)
T ss_dssp -------TCHHHHHHHHHHHHHHTSSST
T ss_pred -------CHHHHHHHHHHHHHHHHcCCc
Confidence 112445677777777765543
No 12
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=98.69 E-value=1.6e-06 Score=93.50 Aligned_cols=245 Identities=13% Similarity=0.132 Sum_probs=180.8
Q ss_pred hHHHHHHhhhccccCCCChHHHHhc-CChHHHHHhhcCC-CchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcCh
Q 045086 78 DLHEELEKLKVLAGGPELYPDVVNL-NVIPSILGLLSHD-NTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNV 155 (522)
Q Consensus 78 dLd~~Ik~l~~La~~P~LYp~~v~l-~~v~sL~~LLsHe-NtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~ 155 (522)
--..+...|..|+..++--..++.. |+++.|+.+|.+. +.++...++..|..|+..+ + ....+++.++
T Consensus 30 vr~~A~~~L~~La~~~~~~~~i~~~~~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls~~~------~----~~~~i~~~g~ 99 (644)
T 2z6h_A 30 VVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHR------E----GLLAIFKSGG 99 (644)
T ss_dssp HHHHHHHHHHHHHTSTTHHHHHTTCHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSH------H----HHHHHHTTTH
T ss_pred HHHHHHHHHHHHHCCChhHHHHHhccChHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCh------h----hHHHHHHcCC
Confidence 3556788888899888744445544 8999999999865 8999999999999888653 1 2355667788
Q ss_pred HHHHHHHhhhhcCCCCChhHHHHHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChhhhhHHHHHHHHhc
Q 045086 156 LELLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQ 235 (522)
Q Consensus 156 ~~lLv~nL~RldE~~~~e~e~~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ 235 (522)
+..|++-|.. . + ......++..+-|+....+.....+. +.+.++.|++.++.... +-+..|...|..|..
T Consensus 100 i~~Lv~lL~~---~--~---~~v~~~A~~aL~nL~~~~~~~~~~v~-~~g~i~~Lv~lL~~~~~-~~~~~a~~~L~~La~ 169 (644)
T 2z6h_A 100 IPALVKMLGS---P--V---DSVLFYAITTLHNLLLHQEGAKMAVR-LAGGLQKMVALLNKTNV-KFLAITTDCLQILAY 169 (644)
T ss_dssp HHHHHHHTTC---S--S---HHHHHHHHHHHHHHHHHSTTHHHHHH-HTTHHHHHHHGGGCCCH-HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhC---C--C---HHHHHHHHHHHHHHHhCcchhHHHHH-HCCChHHHHHHHCcCCH-HHHHHHHHHHHHHHh
Confidence 8888887643 1 2 35677788888898876555544444 56799999999986532 334566788999998
Q ss_pred CChHHHHHhhhhchHHHHHHHHhhcccCCCCCCcHHHHHHhHHHHHHHhhCChhhHHHHHHhhhHHHHHHHHhcch-h--
Q 045086 236 NSTANQKRLGQMNGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVLMPLENKERFVKAEGVELMIIIMKQKK-S-- 312 (522)
Q Consensus 236 ~s~~nr~~~~~~dGiD~LL~~la~YrkrDP~~~eE~E~mENlFd~Lcs~L~~~~nk~~Fl~~EGveLM~lmlkekk-~-- 312 (522)
++++++..+...+||..|++.+..+ +.+...+++..+|+.+-..+++|..+++.-|+..++.+++... .
T Consensus 170 ~~~~~~~~i~~~g~v~~Lv~lL~~~--------~~~~~~~~a~~~L~nLs~~~~~~~~l~~~g~l~~L~~ll~~~~~~~~ 241 (644)
T 2z6h_A 170 GNQESKLIILASGGPQALVNIMRTY--------TYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLV 241 (644)
T ss_dssp TCHHHHHHHHHTTHHHHHHHHHTTC--------CCHHHHHHHHHHHHHHTTCTTHHHHHHHTTHHHHHHTTTTCSCHHHH
T ss_pred cCcHHHHHHHHcCChHHHHHHHHcC--------ChHHHHHHHHHHHHHHhcCcccHHHHHHCCCHHHHHHHHhcCCHHHH
Confidence 8999999999999999999999532 1245678888888888889999999999999998887776531 1
Q ss_pred -------------------------------------hhhhhHHHHHHHhcCCcchhhhHHhhhchhhHHHhhhc
Q 045086 313 -------------------------------------AYASAIRALDFAMTKYPPACERFVDVLGLKTAFAAFMG 350 (522)
Q Consensus 313 -------------------------------------sr~~AlKvLD~Al~~~~~~C~~fVe~~GLktlF~~FM~ 350 (522)
.+..|..+|-+-..+++.++..+++.+|+..|..++..
T Consensus 242 ~~a~~~L~nL~~~~~~~~~~~~~i~~Lv~lL~~~d~~v~~~a~~aL~~L~~~~~~~~~~v~~~g~v~~Lv~lL~~ 316 (644)
T 2z6h_A 242 QNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLR 316 (644)
T ss_dssp HHHHHHHHHHGGGCTTCCSCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcchhhhhhhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHHc
Confidence 12223333333323345788899999999999998875
No 13
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=98.67 E-value=1.4e-06 Score=93.98 Aligned_cols=222 Identities=15% Similarity=0.201 Sum_probs=162.3
Q ss_pred HHHhcCChHHHHHhhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhc-ChHHHHHHHhhhhcCCCCChhHH
Q 045086 98 DVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIEN-NVLELLVQNIQRLSDADSDPDEM 176 (522)
Q Consensus 98 ~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~-~~~~lLv~nL~RldE~~~~e~e~ 176 (522)
..+..|+++.|+.||.|+|..+...++..|..|...+. .. ..++.. +++..||+.|.. .. +.+
T Consensus 9 ~~~~~g~i~~Lv~lL~~~~~~vr~~A~~~L~~La~~~~------~~----~~i~~~~~~i~~Lv~~L~~--~~--~~~-- 72 (644)
T 2z6h_A 9 AELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEA------SR----HAIMRSPQMVSAIVRTMQN--TN--DVE-- 72 (644)
T ss_dssp ---CTTTHHHHHHHHTCSCHHHHHHHHHHHHHHHTSTT------HH----HHHTTCHHHHHHHHHHHHS--CC--CHH--
T ss_pred hhhhhchHHHHHHHHcCCCHHHHHHHHHHHHHHHCCCh------hH----HHHHhccChHHHHHHHHhc--CC--CHH--
Confidence 34788999999999999999999999999999987641 11 222322 556677777652 11 222
Q ss_pred HHHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChhhhhHHHHHHHHhcCChHHHHHhhhhchHHHHHHH
Q 045086 177 AAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNSTANQKRLGQMNGVDVLLQA 256 (522)
Q Consensus 177 ~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ~s~~nr~~~~~~dGiD~LL~~ 256 (522)
...++...+-||.. .++....++ +.+.++.|++-++.. -..-+.+|...|.-|...++.++..+.+.++|..|++.
T Consensus 73 -~~~~A~~~L~~Ls~-~~~~~~~i~-~~g~i~~Lv~lL~~~-~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~l 148 (644)
T 2z6h_A 73 -TARCTAGTLHNLSH-HREGLLAIF-KSGGIPALVKMLGSP-VDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVAL 148 (644)
T ss_dssp -HHHHHHHHHHHHTT-SHHHHHHHH-TTTHHHHHHHHTTCS-SHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHG
T ss_pred -HHHHHHHHHHHHhc-ChhhHHHHH-HcCCHHHHHHHHhCC-CHHHHHHHHHHHHHHHhCcchhHHHHHHCCChHHHHHH
Confidence 33455556667665 666666666 457899999988764 24568899999999999888888888888999999998
Q ss_pred HhhcccCCCCCCcHHHHHHhHHHHHHHhhC-ChhhHHHHHHhhhHHHHHHHHhcch--hhhhhhHHHHHHHhcCCcchhh
Q 045086 257 VAMYKSKDPKTSDEEEMLENLFDSLCCVLM-PLENKERFVKAEGVELMIIIMKQKK--SAYASAIRALDFAMTKYPPACE 333 (522)
Q Consensus 257 la~YrkrDP~~~eE~E~mENlFd~Lcs~L~-~~~nk~~Fl~~EGveLM~lmlkekk--~sr~~AlKvLD~Al~~~~~~C~ 333 (522)
+.. .+ .+.....-.||+.+-. .+++|..+.+..|++..+.+++... ..+..|+++|-.. +.++.++.
T Consensus 149 L~~---~~------~~~~~~a~~~L~~La~~~~~~~~~i~~~g~v~~Lv~lL~~~~~~~~~~~a~~~L~nL-s~~~~~~~ 218 (644)
T 2z6h_A 149 LNK---TN------VKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVL-SVCSSNKP 218 (644)
T ss_dssp GGC---CC------HHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHHHHHHHHHH-TTCTTHHH
T ss_pred HCc---CC------HHHHHHHHHHHHHHHhcCcHHHHHHHHcCChHHHHHHHHcCChHHHHHHHHHHHHHH-hcCcccHH
Confidence 853 11 1345555667776664 7999999999999999999998653 3445566666544 34778999
Q ss_pred hHHhhhchhhHHHhhh
Q 045086 334 RFVDVLGLKTAFAAFM 349 (522)
Q Consensus 334 ~fVe~~GLktlF~~FM 349 (522)
.+++.+|+..|..++.
T Consensus 219 ~l~~~g~l~~L~~ll~ 234 (644)
T 2z6h_A 219 AIVEAGGMQALGLHLT 234 (644)
T ss_dssp HHHHTTHHHHHHTTTT
T ss_pred HHHHCCCHHHHHHHHh
Confidence 9999999999988764
No 14
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=98.65 E-value=1.5e-06 Score=89.25 Aligned_cols=274 Identities=13% Similarity=0.065 Sum_probs=193.4
Q ss_pred HhhHHHHHHhhhccccCCCChHHHHhcCChHHHHHhhc-----------CCCchHHHHHHHHhhhhcccccccCCCchHH
Q 045086 76 EVDLHEELEKLKVLAGGPELYPDVVNLNVIPSILGLLS-----------HDNTDIAIDVVHLLQDLTDEDVLEDNDEPAR 144 (522)
Q Consensus 76 E~dLd~~Ik~l~~La~~P~LYp~~v~l~~v~sL~~LLs-----------HeNtDIai~vi~lL~ELtD~d~~~e~~e~~~ 144 (522)
+-..-.+++.|.-+|..|+.=..+++.|+++.|+.||. |+|.++-..+...|.-|+-.+ +...
T Consensus 46 ~~~~~~A~~aL~nls~d~e~R~~i~~~G~l~~Lv~LL~~~~~~~~~~~~~~~~~~q~~Aa~aL~nLa~~~------~~~k 119 (354)
T 3nmw_A 46 EHQICPAVCVLMKLSFDEEHRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGD------VANK 119 (354)
T ss_dssp GGTHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHTSSC------HHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHHHcCC------HHHH
Confidence 35566889999999999998888999999999999994 456778888888888887433 1122
Q ss_pred HHHHHHHhcChHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHHhhhcc-ChhHHHHHhhhhchHHHHHhhccccCCChhh
Q 045086 145 VLVDALIENNVLELLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEV-KPSVAELVCERTKLLRWLLGKIKVREFDSNK 223 (522)
Q Consensus 145 ~Lv~aL~~~~~~~lLv~nL~RldE~~~~e~e~~gV~~~L~iiENl~e~-~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk 223 (522)
..+.. ..+++..||+-|.. . ++ .-..++.+.+-||..- ++.....++ +.+.++-|++.+....-..-+
T Consensus 120 ~~i~~--~~GaIp~LV~LL~s---~--~~---~v~~~A~~aL~nLs~~~~~~~k~~i~-~~G~Ip~Lv~lL~~~~~~~~~ 188 (354)
T 3nmw_A 120 ATLCS--MKGCMRALVAQLKS---E--SE---DLQQVIASVLRNLSWRADVNSKKTLR-EVGSVKALMECALEVKKESTL 188 (354)
T ss_dssp HHHHH--CHHHHHHHHHGGGC---S--CH---HHHHHHHHHHHHHHTTCCHHHHHHHH-HTTHHHHHHHHHHHCCCHHHH
T ss_pred HHHHH--cCCcHHHHHHHHCC---C--CH---HHHHHHHHHHHHHhccCCHHHHHHHH-HCCCHHHHHHHHhcCCCHHHH
Confidence 22211 23457788887752 2 22 2234556667777653 345445455 566788888776443323345
Q ss_pred hhHHHHHHHHhcCChHHHHHhh-hhchHHHHHHHHhhcccCCCCCCcHHHHHHhHHHHHHHhh----CChhhHHHHHHhh
Q 045086 224 QYASEILAILLQNSTANQKRLG-QMNGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVL----MPLENKERFVKAE 298 (522)
Q Consensus 224 ~YAsEiLaILLQ~s~~nr~~~~-~~dGiD~LL~~la~YrkrDP~~~eE~E~mENlFd~Lcs~L----~~~~nk~~Fl~~E 298 (522)
..|.-.|.-|-..++.|+..+. ..+||..|.+.+. ++.+....+..+|.--+|..+- ..+++|..+.+..
T Consensus 189 ~~A~~aL~nLs~~~~~nk~~i~~~~Gai~~Lv~lL~-----~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~g 263 (354)
T 3nmw_A 189 KSVLSALWNLSAHCTENKADICAVDGALAFLVGTLT-----YRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENN 263 (354)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHSTTHHHHHHHHTT-----CCCSSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTT
T ss_pred HHHHHHHHHHHccChhhhHHHHHhcCcHHHHHHHhc-----cCCCcccHHHHHHHHHHHHHHHhhccCCHHHHHHHHHcC
Confidence 5677778878777888998888 6788999999884 2222222356677766666655 3899999999999
Q ss_pred hHHHHHHHHhcch-hhhhhhHHHHHHHhcCCcchhhhHHhhhchhhHHHhhhcCCCCcccccchhhhHHHHHHHHHHHHH
Q 045086 299 GVELMIIIMKQKK-SAYASAIRALDFAMTKYPPACERFVDVLGLKTAFAAFMGKIPVNKKNKKERYQEELEERLVSLIAS 377 (522)
Q Consensus 299 GveLM~lmlkekk-~sr~~AlKvLD~Al~~~~~~C~~fVe~~GLktlF~~FM~k~~~~k~~kk~~~~~e~eEhvisIiaS 377 (522)
||...+.+|+.+. ..+..|..+|-....+++.+...+++.+|+..|..++-.+ ..+.-+..+..+..
T Consensus 264 ~i~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~i~~Lv~LL~s~------------~~~i~~~A~~aL~n 331 (354)
T 3nmw_A 264 CLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSK------------HKMIAMGSAAALRN 331 (354)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTHHHHHHTTTTCS------------SHHHHHHHHHHHHH
T ss_pred CHHHHHHHHcCCChHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHhCC------------CHHHHHHHHHHHHH
Confidence 9999999998764 4577777777666556788999999999999998876422 12446788889999
Q ss_pred HhccCC
Q 045086 378 LFGGIL 383 (522)
Q Consensus 378 Llr~l~ 383 (522)
|+.+-|
T Consensus 332 L~~~~~ 337 (354)
T 3nmw_A 332 LMANRP 337 (354)
T ss_dssp HHTTCC
T ss_pred HHcCCH
Confidence 988754
No 15
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=98.60 E-value=1.8e-06 Score=86.55 Aligned_cols=262 Identities=13% Similarity=0.131 Sum_probs=191.2
Q ss_pred HHHHHhhhccccC-CCChHHHHhcCChHHHHHhhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcChHHH
Q 045086 80 HEELEKLKVLAGG-PELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLEL 158 (522)
Q Consensus 80 d~~Ik~l~~La~~-P~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~~~l 158 (522)
..+...|..++.. |+.-..+++.|+++.|+.+|.++|.++...++..|..+..... ...+.+++.+++..
T Consensus 83 ~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~vr~~a~~~L~~l~~~~~---------~~~~~~~~~~~i~~ 153 (450)
T 2jdq_A 83 FESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDST---------MCRDYVLDCNILPP 153 (450)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCH---------HHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHhCCCHHHHHHHHcCCCHHHHHHHHHHHHHHccCCH---------HHHHHHHHCCCHHH
Confidence 3455666666654 5666678889999999999999999999999999999986431 13355667788888
Q ss_pred HHHHhhhhcCCCCChhHHHHHHHHHHHHHhhhccC-hhHHHHHhhhhchHHHHHhhccccCCChhhhhHHHHHHHHhcCC
Q 045086 159 LVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVK-PSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNS 237 (522)
Q Consensus 159 Lv~nL~RldE~~~~e~e~~gV~~~L~iiENl~e~~-p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ~s 237 (522)
|++-|.. .. +. .-..+++..+-|++.-. |.....+. .++++.|++-++... ..-+..|...|+-|...+
T Consensus 154 L~~~l~~--~~--~~---~v~~~a~~~L~~l~~~~~~~~~~~~~--~~~l~~L~~~l~~~~-~~v~~~a~~~L~~l~~~~ 223 (450)
T 2jdq_A 154 LLQLFSK--QN--RL---TMTRNAVWALSNLCRGKSPPPEFAKV--SPCLNVLSWLLFVSD-TDVLADACWALSYLSDGP 223 (450)
T ss_dssp HHHHTTS--CC--CH---HHHHHHHHHHHHHHCCSSSCCCGGGT--GGGHHHHHHHTTCCC-HHHHHHHHHHHHHHTSSS
T ss_pred HHHHhcC--CC--CH---HHHHHHHHHHHHHhCCCCCCCCHHHH--HHHHHHHHHHHccCC-HHHHHHHHHHHHHHHCCC
Confidence 8887752 11 22 33445566677777543 43322222 568899998887432 334678889999999988
Q ss_pred hHHHHHhhhhchHHHHHHHHhhcccCCCCCCcHHHHHHhHHHHHHHhhCChh-hHHHHHHhhhHHHHHHHHhcc-hhhhh
Q 045086 238 TANQKRLGQMNGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVLMPLE-NKERFVKAEGVELMIIIMKQK-KSAYA 315 (522)
Q Consensus 238 ~~nr~~~~~~dGiD~LL~~la~YrkrDP~~~eE~E~mENlFd~Lcs~L~~~~-nk~~Fl~~EGveLM~lmlkek-k~sr~ 315 (522)
++++..+...+++..|++.+. +| +.+..++...+|+.+....+ .+..+++..++..++.+++.. ...|.
T Consensus 224 ~~~~~~~~~~~~i~~L~~ll~-----~~----~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~vr~ 294 (450)
T 2jdq_A 224 NDKIQAVIDAGVCRRLVELLM-----HN----DYKVVSPALRAVGNIVTGDDIQTQVILNCSALQSLLHLLSSPKESIKK 294 (450)
T ss_dssp HHHHHHHHHTTTHHHHHHHTT-----CS----CHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHTTCSSHHHHH
T ss_pred cHHHHHHHHcCcHHHHHHHHC-----CC----chhHHHHHHHHHHHHhhCChHHHHHHHHCccHHHHHHHHcCCCHHHHH
Confidence 888888887889999999884 22 35778899999999887544 455677888999999999865 35688
Q ss_pred hhHHHHHHHhcCCcchhhhHHhhhchhhHHHhhhcCCCCcccccchhhhHHHHHHHHHHHHHHhcc
Q 045086 316 SAIRALDFAMTKYPPACERFVDVLGLKTAFAAFMGKIPVNKKNKKERYQEELEERLVSLIASLFGG 381 (522)
Q Consensus 316 ~AlKvLD~Al~~~~~~C~~fVe~~GLktlF~~FM~k~~~~k~~kk~~~~~e~eEhvisIiaSLlr~ 381 (522)
.|+.+|-.-..+++..+..+++.+++..|..++... ..+.-...+..++.|...
T Consensus 295 ~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~~l~~~------------~~~v~~~a~~~L~~l~~~ 348 (450)
T 2jdq_A 295 EACWTISNITAGNRAQIQTVIDANIFPALISILQTA------------EFRTRKEAAWAITNATSG 348 (450)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHHS------------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcC------------CHHHHHHHHHHHHHHHcC
Confidence 899999877667778889999999999998888532 123445667777777664
No 16
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=98.59 E-value=1.3e-05 Score=80.34 Aligned_cols=260 Identities=17% Similarity=0.167 Sum_probs=191.5
Q ss_pred HHHHHhhhccccC--CCChHHHHhcCChHHHHHhhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcChHH
Q 045086 80 HEELEKLKVLAGG--PELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLE 157 (522)
Q Consensus 80 d~~Ik~l~~La~~--P~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~~~ 157 (522)
..++..|..|+.. |..-..++ .|+++.|+.+|.|++.++...++..|..|++... + ....+++.+++.
T Consensus 168 ~~a~~~L~~l~~~~~~~~~~~~~-~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~-----~----~~~~~~~~~~i~ 237 (450)
T 2jdq_A 168 RNAVWALSNLCRGKSPPPEFAKV-SPCLNVLSWLLFVSDTDVLADACWALSYLSDGPN-----D----KIQAVIDAGVCR 237 (450)
T ss_dssp HHHHHHHHHHHCCSSSCCCGGGT-GGGHHHHHHHTTCCCHHHHHHHHHHHHHHTSSSH-----H----HHHHHHHTTTHH
T ss_pred HHHHHHHHHHhCCCCCCCCHHHH-HHHHHHHHHHHccCCHHHHHHHHHHHHHHHCCCc-----H----HHHHHHHcCcHH
Confidence 3456667777755 44322333 7899999999999999999999999999987431 1 234556778888
Q ss_pred HHHHHhhhhcCCCCChhHHHHHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChhhhhHHHHHHHHhcCC
Q 045086 158 LLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNS 237 (522)
Q Consensus 158 lLv~nL~RldE~~~~e~e~~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ~s 237 (522)
.|++-|. .. + ..-...++..+-|+..-.+.....+. +.++++.|++-++.. -..-+..|...|+-|..++
T Consensus 238 ~L~~ll~---~~--~---~~v~~~a~~~L~~l~~~~~~~~~~~~-~~~~l~~L~~ll~~~-~~~vr~~a~~~L~~l~~~~ 307 (450)
T 2jdq_A 238 RLVELLM---HN--D---YKVVSPALRAVGNIVTGDDIQTQVIL-NCSALQSLLHLLSSP-KESIKKEACWTISNITAGN 307 (450)
T ss_dssp HHHHHTT---CS--C---HHHHHHHHHHHHHHTTSCHHHHHHHH-TTTHHHHHHHHTTCS-SHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHC---CC--c---hhHHHHHHHHHHHHhhCChHHHHHHH-HCccHHHHHHHHcCC-CHHHHHHHHHHHHHHHcCC
Confidence 8888764 22 2 24456677888888886776665555 457999999998763 2334677888899999888
Q ss_pred hHHHHHhhhhchHHHHHHHHhhcccCCCCCCcHHHHHHhHHHHHHHhhC--ChhhHHHHHHhhhHHHHHHHHhcc-hhhh
Q 045086 238 TANQKRLGQMNGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVLM--PLENKERFVKAEGVELMIIIMKQK-KSAY 314 (522)
Q Consensus 238 ~~nr~~~~~~dGiD~LL~~la~YrkrDP~~~eE~E~mENlFd~Lcs~L~--~~~nk~~Fl~~EGveLM~lmlkek-k~sr 314 (522)
+.....+.+.+++..|++.+.. | ..+.-.+..-+|+.+.. .+++...+++..++..++.+++.+ ...+
T Consensus 308 ~~~~~~~~~~~~l~~L~~~l~~-----~----~~~v~~~a~~~L~~l~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~ 378 (450)
T 2jdq_A 308 RAQIQTVIDANIFPALISILQT-----A----EFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIV 378 (450)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHH-----S----CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCHHHHHHGGGSSCHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHhc-----C----CHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCCHHHHHHHhcCCCHHHH
Confidence 8888888777899999998862 1 24567788888888875 577888888889999999999876 3456
Q ss_pred hhhHHHHHHHhcCC-----------cchhhhHHhhhchhhHHHhhhcCCCCcccccchhhhHHHHHHHHHHHHHHhc
Q 045086 315 ASAIRALDFAMTKY-----------PPACERFVDVLGLKTAFAAFMGKIPVNKKNKKERYQEELEERLVSLIASLFG 380 (522)
Q Consensus 315 ~~AlKvLD~Al~~~-----------~~~C~~fVe~~GLktlF~~FM~k~~~~k~~kk~~~~~e~eEhvisIiaSLlr 380 (522)
..|+..|..-+..+ .+.|..|.+.+|+..|+.+.-. ...+.-++.++|+..+|.
T Consensus 379 ~~a~~aL~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~l~~~------------~~~~v~~~a~~~l~~~~~ 443 (450)
T 2jdq_A 379 QVALNGLENILRLGEQEAKRNGTGINPYCALIEEAYGLDKIEFLQSH------------ENQEIYQKAFDLIEHYFG 443 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCSCCCHHHHHHHHHHCHHHHHHHHCH------------HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhchhhhhccccchhHHHHHHHHcCcHHHHHHHHcC------------CCHHHHHHHHHHHHHHCC
Confidence 77777776655422 3468999999999999885421 234667899999999985
No 17
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=98.56 E-value=1.1e-05 Score=84.32 Aligned_cols=263 Identities=12% Similarity=0.101 Sum_probs=196.1
Q ss_pred HHHHhhhccccC-CCChHHHHhcCChHHHHHhhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcChHHHH
Q 045086 81 EELEKLKVLAGG-PELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELL 159 (522)
Q Consensus 81 ~~Ik~l~~La~~-P~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~~~lL 159 (522)
.++..|..|+.. |+....++..|+++.|+.+|.+++.++...++..|..|.......- . ..+..+++..|
T Consensus 192 ~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~~---~------~~~~~~~l~~L 262 (530)
T 1wa5_B 192 QAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQP---D------WSVVSQALPTL 262 (530)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSCC---C------HHHHGGGHHHH
T ss_pred HHHHHHHHHhCCCccchHHHHHcCcHHHHHHHhccCCHHHHHHHHHHHHHHhCCCCCCC---c------HHHHHhHHHHH
Confidence 445566667766 4566667889999999999999999999999999999987541111 1 11234566777
Q ss_pred HHHhhhhcCCCCChhHHHHHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChhhhhHHHHHHHHhcCChH
Q 045086 160 VQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNSTA 239 (522)
Q Consensus 160 v~nL~RldE~~~~e~e~~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ~s~~ 239 (522)
++-|. .. + ..-..+++.++-||..-.|+....+. ..++++.|+.-+... -..-+.+|..+|+-|..+++.
T Consensus 263 ~~lL~---~~--d---~~v~~~a~~~L~~L~~~~~~~~~~~~-~~~~v~~Lv~lL~~~-~~~v~~~a~~~L~~l~~~~~~ 332 (530)
T 1wa5_B 263 AKLIY---SM--D---TETLVDACWAISYLSDGPQEAIQAVI-DVRIPKRLVELLSHE-STLVQTPALRAVGNIVTGNDL 332 (530)
T ss_dssp HHHTT---CC--C---HHHHHHHHHHHHHHHSSCHHHHHHHH-HTTCHHHHHHGGGCS-CHHHHHHHHHHHHHHTTSCHH
T ss_pred HHHHc---CC--C---HHHHHHHHHHHHHHhCCCHHHHHHHH-hcCcHHHHHHHHCCC-ChhhHHHHHHHHHHHHcCCHH
Confidence 76653 22 2 34566788888899987777666665 467899999988743 234477899999999999888
Q ss_pred HHHHhhhhchHHHHHHHHhhcccCCCCCCcHHHHHHhHHHHHHHhhC-ChhhHHHHHHhhhHHHHHHHHhcc-hhhhhhh
Q 045086 240 NQKRLGQMNGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVLM-PLENKERFVKAEGVELMIIIMKQK-KSAYASA 317 (522)
Q Consensus 240 nr~~~~~~dGiD~LL~~la~YrkrDP~~~eE~E~mENlFd~Lcs~L~-~~~nk~~Fl~~EGveLM~lmlkek-k~sr~~A 317 (522)
....+...+++..|++.+.. | ..+......-+|+.+.. .++....+++..++..++.+|+.. ...+..|
T Consensus 333 ~~~~~~~~~~l~~L~~lL~~-----~----~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a 403 (530)
T 1wa5_B 333 QTQVVINAGVLPALRLLLSS-----P----KENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEA 403 (530)
T ss_dssp HHHHHHHTTHHHHHHHHTTC-----S----CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHH
T ss_pred HHHHHHHcchHHHHHHHHcC-----C----CHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHH
Confidence 88777777899999988842 2 24667778888888775 567778888999999999999865 3567888
Q ss_pred HHHHHHHhcC-Cc--chhhhHHhhhchhhHHHhhhcCCCCcccccchhhhHHHHHHHHHHHHHHhccCC
Q 045086 318 IRALDFAMTK-YP--PACERFVDVLGLKTAFAAFMGKIPVNKKNKKERYQEELEERLVSLIASLFGGIL 383 (522)
Q Consensus 318 lKvLD~Al~~-~~--~~C~~fVe~~GLktlF~~FM~k~~~~k~~kk~~~~~e~eEhvisIiaSLlr~l~ 383 (522)
+.+|-....+ .+ ..|..+++.+++..|..++... ..+.-++++..+..++...+
T Consensus 404 ~~aL~~l~~~~~~~~~~~~~l~~~~~l~~L~~ll~~~------------~~~v~~~al~aL~~l~~~~~ 460 (530)
T 1wa5_B 404 CWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIA------------DNRIIEVTLDALENILKMGE 460 (530)
T ss_dssp HHHHHHHHHHTTTCTHHHHHHHHTTCHHHHHHHTTTC------------CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcHHHHHHHHHCCCHHHHHHHHhCC------------CHHHHHHHHHHHHHHHHhhh
Confidence 8888776664 44 7999999999999999988532 23566788888888887653
No 18
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=98.55 E-value=1.4e-05 Score=83.36 Aligned_cols=262 Identities=13% Similarity=0.182 Sum_probs=190.6
Q ss_pred HHHHHhhhcc-ccCC-CChHHHHhcCChHHHHHhhcCCC-chHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcChH
Q 045086 80 HEELEKLKVL-AGGP-ELYPDVVNLNVIPSILGLLSHDN-TDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVL 156 (522)
Q Consensus 80 d~~Ik~l~~L-a~~P-~LYp~~v~l~~v~sL~~LLsHeN-tDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~~ 156 (522)
..++..|.-+ +..+ ..-..+++.|+++.|+.+|.|++ .++...++..|..+.... ++ ....+++.+++
T Consensus 92 ~~A~~~L~~l~s~~~~~~~~~~~~~g~v~~Lv~lL~~~~~~~v~~~A~~~L~~l~~~~-----~~----~~~~~~~~g~i 162 (528)
T 4b8j_A 92 LEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTREDFPQLQFEAAWALTNIASGT-----SE----NTKVVIDHGAV 162 (528)
T ss_dssp HHHHHHHHHHHTCSSSCCHHHHHHTTCHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSC-----HH----HHHHHHHTTHH
T ss_pred HHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCC-----HH----HHHHHHhCCcH
Confidence 3456666555 4444 55778899999999999999987 999999999999888642 11 23456677888
Q ss_pred HHHHHHhhhhcCCCCChhHHHHHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChhhhhHHHHHHHHhcC
Q 045086 157 ELLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQN 236 (522)
Q Consensus 157 ~lLv~nL~RldE~~~~e~e~~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ~ 236 (522)
..|++-|.. . ++ .-..+++..+-|+..-.|.....+. ..+.++-|++-+....-..-+..|...|+-|..+
T Consensus 163 ~~L~~lL~~---~--~~---~v~~~a~~aL~~l~~~~~~~~~~i~-~~g~l~~Ll~lL~~~~~~~v~~~a~~~L~~L~~~ 233 (528)
T 4b8j_A 163 PIFVKLLGS---S--SD---DVREQAVWALGNVAGDSPKCRDLVL-ANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRG 233 (528)
T ss_dssp HHHHHHTTC---S--CH---HHHHHHHHHHHHHHHTCHHHHHHHH-HTTCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHhcC---C--CH---HHHHHHHHHHHHHhCCChhhHHHHH-HCCcHHHHHHHHhcCCCHHHHHHHHHHHHHHHcC
Confidence 888887753 2 22 3455677778888876676666555 5678999999986544444577888999999887
Q ss_pred ChHHHHHhhhhchHHHHHHHHhhcccCCCCCCcHHHHHHhHHHHHHHhhCChhhH-HHHHHhhhHHHHHHHHhcch-hhh
Q 045086 237 STANQKRLGQMNGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVLMPLENK-ERFVKAEGVELMIIIMKQKK-SAY 314 (522)
Q Consensus 237 s~~nr~~~~~~dGiD~LL~~la~YrkrDP~~~eE~E~mENlFd~Lcs~L~~~~nk-~~Fl~~EGveLM~lmlkekk-~sr 314 (522)
.+..+. ....+++..|++.+. + ...+...+...+|+.+...++++ ..+.+..++..++.+|+... ..+
T Consensus 234 ~~~~~~-~~~~~~l~~L~~lL~-----~----~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~v~~Lv~lL~~~~~~v~ 303 (528)
T 4b8j_A 234 KPQPSF-EQTRPALPALARLIH-----S----NDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVL 303 (528)
T ss_dssp SSCCCH-HHHTTHHHHHHHHTT-----C----CCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTCHHHHHHHTTCSCHHHH
T ss_pred CCCCcH-HHHHHHHHHHHHHHC-----C----CCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCHHHHHHHHHcCCChhHH
Confidence 633332 223578899888873 1 23578889999999998776655 67888899999999998764 568
Q ss_pred hhhHHHHHHHhcCCcchhhhHHhhhchhhHHHhhhcCCCCcccccchhhhHHHHHHHHHHHHHHhc
Q 045086 315 ASAIRALDFAMTKYPPACERFVDVLGLKTAFAAFMGKIPVNKKNKKERYQEELEERLVSLIASLFG 380 (522)
Q Consensus 315 ~~AlKvLD~Al~~~~~~C~~fVe~~GLktlF~~FM~k~~~~k~~kk~~~~~e~eEhvisIiaSLlr 380 (522)
..|+.+|-....+.+..+..+++.+++..|..++-.. .....-...+.+++.|..
T Consensus 304 ~~a~~~L~nl~~~~~~~~~~~~~~~~l~~L~~lL~~~-----------~~~~v~~~A~~~L~nl~~ 358 (528)
T 4b8j_A 304 IPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQN-----------LKKSIKKEACWTISNITA 358 (528)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHHHSC-----------CCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHhhhHHHHHHHHcCC-----------CcHHHHHHHHHHHHHHHC
Confidence 8899999888777788888999999999998887532 012334556666776655
No 19
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=98.51 E-value=1.2e-05 Score=83.78 Aligned_cols=263 Identities=13% Similarity=0.119 Sum_probs=190.7
Q ss_pred HHHHHHhhhccccCCCChHHHHhcCChHHHHHhhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcChHHH
Q 045086 79 LHEELEKLKVLAGGPELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLEL 158 (522)
Q Consensus 79 Ld~~Ik~l~~La~~P~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~~~l 158 (522)
...++..|..|+.....-+..+..|+++.|+.+|.|++.++...++..|..|++.. + ..+..+++.+++..
T Consensus 220 ~~~a~~~L~~L~~~~~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~~-----~----~~~~~~~~~g~v~~ 290 (528)
T 4b8j_A 220 LRNATWTLSNFCRGKPQPSFEQTRPALPALARLIHSNDEEVLTDACWALSYLSDGT-----N----DKIQAVIEAGVCPR 290 (528)
T ss_dssp HHHHHHHHHHHHCSSSCCCHHHHTTHHHHHHHHTTCCCHHHHHHHHHHHHHHTSSC-----H----HHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHcCC-----H----HHHHHHHHcCHHHH
Confidence 34455556666665322233445899999999999999999999999999999653 1 12355667788888
Q ss_pred HHHHhhhhcCCCCChhHHHHHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChhhhhHHHHHHHHhcCCh
Q 045086 159 LVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNST 238 (522)
Q Consensus 159 Lv~nL~RldE~~~~e~e~~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ~s~ 238 (522)
|++-|.. . + ..-...++.++=||+.-.+.....+. +.++++.|++-++...-..-+..|.-.|+-|..+++
T Consensus 291 Lv~lL~~---~--~---~~v~~~a~~~L~nl~~~~~~~~~~~~-~~~~l~~L~~lL~~~~~~~v~~~A~~~L~nl~~~~~ 361 (528)
T 4b8j_A 291 LVELLLH---P--S---PSVLIPALRTVGNIVTGDDAQTQCII-DHQALPCLLSLLTQNLKKSIKKEACWTISNITAGNK 361 (528)
T ss_dssp HHHHTTC---S--C---HHHHHHHHHHHHHHTTSCHHHHHHHH-TTTHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTSCH
T ss_pred HHHHHcC---C--C---hhHHHHHHHHHHHHHcCCHHHHHHHH-HhhhHHHHHHHHcCCCcHHHHHHHHHHHHHHHCCCH
Confidence 8887642 1 2 24556788889999986777666665 577999999998754344557788899999999888
Q ss_pred HHHHHhhhhchHHHHHHHHhhcccCCCCCCcHHHHHHhHHHHHHHhhCC--hhhHHHHHHhhhHHHHHHHHhcch-hhhh
Q 045086 239 ANQKRLGQMNGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVLMP--LENKERFVKAEGVELMIIIMKQKK-SAYA 315 (522)
Q Consensus 239 ~nr~~~~~~dGiD~LL~~la~YrkrDP~~~eE~E~mENlFd~Lcs~L~~--~~nk~~Fl~~EGveLM~lmlkekk-~sr~ 315 (522)
.....+...++|..|++.+.. ...+...+...+|+.+... +++...+++..+++.++-++.... ..+.
T Consensus 362 ~~~~~~~~~~~i~~L~~lL~~---------~~~~v~~~a~~aL~nl~~~~~~~~~~~l~~~~~i~~L~~lL~~~d~~v~~ 432 (528)
T 4b8j_A 362 DQIQAVINAGIIGPLVNLLQT---------AEFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPLCDLLICPDIRIVT 432 (528)
T ss_dssp HHHHHHHHTTCHHHHHHHHHH---------SCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHhc---------CCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHH
Confidence 888888888999999998853 1346778888888888764 888888999999999999998763 4566
Q ss_pred hhHHHHHHHhcCC-----------cchhhhHHhhhchhhHHHhhhcCCCCcccccchhhhHHHHHHHHHHHHHHhc
Q 045086 316 SAIRALDFAMTKY-----------PPACERFVDVLGLKTAFAAFMGKIPVNKKNKKERYQEELEERLVSLIASLFG 380 (522)
Q Consensus 316 ~AlKvLD~Al~~~-----------~~~C~~fVe~~GLktlF~~FM~k~~~~k~~kk~~~~~e~eEhvisIiaSLlr 380 (522)
.|+.+|..-+..+ ...|..|.+.+|+..|..+- .. ...+.-+....|+..+|.
T Consensus 433 ~al~~L~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~L~-~~-----------~~~~v~~~a~~il~~~~~ 496 (528)
T 4b8j_A 433 VCLEGLENILKVGETDKTLAAGDVNVFSQMIDEAEGLEKIENLQ-SH-----------DNNEIYEKAVKILEAYWM 496 (528)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHTTHHHHHHHGG-GC-----------SSHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHhhhcccccccHHHHHHHHCCcHHHHHHHH-cC-----------CCHHHHHHHHHHHHHHCC
Confidence 7777776665422 23688888888888887653 21 112344555666666654
No 20
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=98.51 E-value=4.9e-06 Score=88.51 Aligned_cols=270 Identities=13% Similarity=0.059 Sum_probs=189.5
Q ss_pred HHHHHhhhccccCCCChHHHHhcCChHHHHHhhc-----------CCCchHHHHHHHHhhhhcccccccCCCchHHHHHH
Q 045086 80 HEELEKLKVLAGGPELYPDVVNLNVIPSILGLLS-----------HDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVD 148 (522)
Q Consensus 80 d~~Ik~l~~La~~P~LYp~~v~l~~v~sL~~LLs-----------HeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~ 148 (522)
-.++..|.-+|.+|+.=..+++.|+++.|+.||. |+|..+...+...|.-|+-.+ +.....+.
T Consensus 166 ~qAv~aL~nls~~~e~R~~i~~~G~l~~Lv~LL~~~~~~~~~~~~~~~~~l~~~Aa~aL~nLa~~~------~~~k~~i~ 239 (458)
T 3nmz_A 166 CPAVCVLMKLSFDEEHRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGD------VANKATLC 239 (458)
T ss_dssp HHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHTTC------HHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHhhhhcccccccCCCCHHHHHHHHHHHHHHhCCC------cccHHHHH
Confidence 3678889999999998888999999999999994 356667777778888877433 11222221
Q ss_pred HHHhcChHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHHhhhcc-ChhHHHHHhhhhchHHHHHhhccccCCChhhhhHH
Q 045086 149 ALIENNVLELLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEV-KPSVAELVCERTKLLRWLLGKIKVREFDSNKQYAS 227 (522)
Q Consensus 149 aL~~~~~~~lLv~nL~RldE~~~~e~e~~gV~~~L~iiENl~e~-~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAs 227 (522)
. ..+.+..||+-|.. . ++ .-..++.+.+-||..- ++..-..++ +.+-++-|++.+....-..-+..|.
T Consensus 240 ~--~~GaIp~LV~LL~s---~--~~---~v~~~A~~aL~nLs~~~~~~~k~~I~-~~GaI~~LV~lLl~s~~~~v~~~A~ 308 (458)
T 3nmz_A 240 S--MKGCMRALVAQLKS---E--SE---DLQQVIASVLRNLSWRADVNSKKTLR-EVGSVKALMECALEVKKESTLKSVL 308 (458)
T ss_dssp H--CHHHHHHHHHGGGC---S--CH---HHHHHHHHHHHHHTSSCCHHHHHHHH-HTTHHHHHHHHHTTCCSHHHHHHHH
T ss_pred H--cCCcHHHHHHHHhC---C--CH---HHHHHHHHHHHHHhcCCCHHHHHHHH-HcCCHHHHHHHHhcCCCHHHHHHHH
Confidence 1 23457778887752 2 22 2234455666776652 345444454 5678888888765433223345666
Q ss_pred HHHHHHhcCChHHHHHhh-hhchHHHHHHHHhhcccCCCCCCcHHHHHHhHHHHHHHhh----CChhhHHHHHHhhhHHH
Q 045086 228 EILAILLQNSTANQKRLG-QMNGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVL----MPLENKERFVKAEGVEL 302 (522)
Q Consensus 228 EiLaILLQ~s~~nr~~~~-~~dGiD~LL~~la~YrkrDP~~~eE~E~mENlFd~Lcs~L----~~~~nk~~Fl~~EGveL 302 (522)
-.|.-|-..++.|+..+. ..+||..|.+.|. .+.+.+..+..+|.--+|..+- -.++++..+.+..||..
T Consensus 309 ~aL~nLs~~~~~nk~~I~~~~Gal~~Lv~LL~-----~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~~ 383 (458)
T 3nmz_A 309 SALWNLSAHCTENKADICAVDGALAFLVGTLT-----YRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQT 383 (458)
T ss_dssp HHHHHHHHHCHHHHHHHHHSTTHHHHHHHHTT-----CCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHH
T ss_pred HHHHHHccCCHHHHHHHHHhcCcHHHHHHHhc-----CCCCcchHHHHHHHHHHHHHHHhcccCCHHHHHHHHHcccHHH
Confidence 777777776888998888 6788999999884 2222223367777777776665 48999999999999999
Q ss_pred HHHHHhcch-hhhhhhHHHHHHHhcCCcchhhhHHhhhchhhHHHhhhcCCCCcccccchhhhHHHHHHHHHHHHHHhcc
Q 045086 303 MIIIMKQKK-SAYASAIRALDFAMTKYPPACERFVDVLGLKTAFAAFMGKIPVNKKNKKERYQEELEERLVSLIASLFGG 381 (522)
Q Consensus 303 M~lmlkekk-~sr~~AlKvLD~Al~~~~~~C~~fVe~~GLktlF~~FM~k~~~~k~~kk~~~~~e~eEhvisIiaSLlr~ 381 (522)
.+.+|+.+. ..+..|..+|-....++++++..+++.+|+..|..++-.+ ..+.-+..+..+.+|+.+
T Consensus 384 Lv~LL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~I~~Lv~LL~s~------------~~~v~~~Aa~AL~nL~~~ 451 (458)
T 3nmz_A 384 LLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSK------------HKMIAMGSAAALRNLMAN 451 (458)
T ss_dssp HHHHSSCSCHHHHHHHHHHHHHHHSSCHHHHHHHHHHTHHHHHHTTTTCS------------SHHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCChHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhCC------------CHHHHHHHHHHHHHHHcC
Confidence 999998764 4577777777666556788999999999999998876321 134567888899999887
Q ss_pred CC
Q 045086 382 IL 383 (522)
Q Consensus 382 l~ 383 (522)
-|
T Consensus 452 ~p 453 (458)
T 3nmz_A 452 RP 453 (458)
T ss_dssp CS
T ss_pred CH
Confidence 54
No 21
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=98.48 E-value=3.9e-06 Score=95.12 Aligned_cols=280 Identities=13% Similarity=0.132 Sum_probs=187.5
Q ss_pred HHHHHHhhhccccCCCChHHHH-hcCChHHHHHhhcCCCchHHHHHHHHhhhhcc-cccc------------------cC
Q 045086 79 LHEELEKLKVLAGGPELYPDVV-NLNVIPSILGLLSHDNTDIAIDVVHLLQDLTD-EDVL------------------ED 138 (522)
Q Consensus 79 Ld~~Ik~l~~La~~P~LYp~~v-~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD-~d~~------------------~e 138 (522)
+..++-.|.-|+..|+.+..++ ..|+++.|++||.|+++.|.-.+..+|.-||- .|.. .+
T Consensus 396 ~~~AveaLayLS~~~~vk~~lv~d~g~Ip~LV~LL~s~d~~i~~~al~~L~NLt~~~d~q~~~~~l~~la~~s~~~v~~~ 475 (810)
T 3now_A 396 RRWAADGLAYLTLDAECKEKLIEDKASIHALMDLARGGNQSCLYGVVTTFVNLCNAYEKQEMLPEMIELAKFAKQHIPEE 475 (810)
T ss_dssp HHHHHHHHHHHTTSHHHHHHHHHCHHHHHHHHHHHHTTCGGGHHHHHHHHHHHTTCSCCCCCCCSCGGGTTTTCCSCCCS
T ss_pred HHHHHHHHHHHhCCcHHHHHHHHccchHHHHHHHhCCCChHHHHHHHHHHHHHcCCchhhhhhHHHHHHHHHhhccCccc
Confidence 5677888888999999999999 57999999999999999999999999999986 3311 00
Q ss_pred C----CchHHHHHHHHHhcChHHHHHHHhhhhcCC------------CCChhHHHHHHH---------------------
Q 045086 139 N----DEPARVLVDALIENNVLELLVQNIQRLSDA------------DSDPDEMAAVYN--------------------- 181 (522)
Q Consensus 139 ~----~e~~~~Lv~aL~~~~~~~lLv~nL~RldE~------------~~~e~e~~gV~~--------------------- 181 (522)
. ++....-+..+++++++..||+-|..=+.. ..+++-+..|..
T Consensus 476 ~~ld~~~~v~~r~~~VveaGaVp~LV~LL~s~s~~vqe~Aa~aL~NLA~d~~~r~~Vv~~Gaip~Lv~LL~s~~~~~k~~ 555 (810)
T 3now_A 476 HELDDVDFINKRITVLANEGITTALCALAKTESHNSQELIARVLNAVCGLKELRGKVVQEGGVKALLRMALEGTEKGKRH 555 (810)
T ss_dssp SCHHHHHHHHHHHHHHHHTTHHHHHHHHHTCCCHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHHHSSCHHHHHH
T ss_pred cccccHHHHHHHHHHHHHCcCHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHccCCHHHHHH
Confidence 0 012233347888889999888887642221 001111111111
Q ss_pred HHHHHHhhhc-cChhHHHHHhhhhchHHHHHhhccccCCChh-hhhHHHHHHHHhcCChHHHHHhhhhchHHHHHHHHhh
Q 045086 182 TLATIENLIE-VKPSVAELVCERTKLLRWLLGKIKVREFDSN-KQYASEILAILLQNSTANQKRLGQMNGVDVLLQAVAM 259 (522)
Q Consensus 182 ~L~iiENl~e-~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~N-k~YAsEiLaILLQ~s~~nr~~~~~~dGiD~LL~~la~ 259 (522)
+...+-||+. .+|+.+-......+.++-|++-+... .+.- +..|.--|+-|...+++++..+.+.+|++.|.+.+..
T Consensus 556 Aa~AL~nL~~~~~p~~~~~~~~~~~aIppLv~LL~~~-~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~s 634 (810)
T 3now_A 556 ATQALARIGITINPEVSFSGQRSLDVIRPLLNLLQQD-CTALENFESLMALTNLASMNESVRQRIIKEQGVSKIEYYLME 634 (810)
T ss_dssp HHHHHHHHHHHSCHHHHTTTHHHHHTHHHHHHTTSTT-SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHS
T ss_pred HHHHHHHHhcCCChhhhhcchhhhcHHHHHHHHhCCC-CcHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcC
Confidence 1111111110 11111000000011233444333311 1111 2346667888888888999999888999999998852
Q ss_pred cccCCCCCCcHHHHHHhHHHHHHHhhCChhhHHHHHH-hhhHHHHHHHHhcch-hhhhhhHHHHHHHhcCCcchhhhHHh
Q 045086 260 YKSKDPKTSDEEEMLENLFDSLCCVLMPLENKERFVK-AEGVELMIIIMKQKK-SAYASAIRALDFAMTKYPPACERFVD 337 (522)
Q Consensus 260 YrkrDP~~~eE~E~mENlFd~Lcs~L~~~~nk~~Fl~-~EGveLM~lmlkekk-~sr~~AlKvLD~Al~~~~~~C~~fVe 337 (522)
.+ ...-++...|||.+...++++..|.+ ..++..++.++.... ..+..|...|-+...+++.+|..+++
T Consensus 635 ---~~------~~Vq~~A~~~L~NLa~~~~~~~~~v~~~g~l~~Lv~LL~s~d~~vq~~Aa~ALanLt~~s~~~~~~ii~ 705 (810)
T 3now_A 635 ---DH------LYLTRAAAQCLCNLVMSEDVIKMFEGNNDRVKFLALLCEDEDEETATACAGALAIITSVSVKCCEKILA 705 (810)
T ss_dssp ---CC------TTHHHHHHHHHHHHTTSHHHHHHHHSSSSHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHCHHHHHHHHT
T ss_pred ---CC------HHHHHHHHHHHHHHhCChHHHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 11 23567999999999999999999996 578999999998764 67888888888887778889999999
Q ss_pred -hhchhhHHHhhhcCCCCcccccchhhhHHHHHHHHHHHHHHhc
Q 045086 338 -VLGLKTAFAAFMGKIPVNKKNKKERYQEELEERLVSLIASLFG 380 (522)
Q Consensus 338 -~~GLktlF~~FM~k~~~~k~~kk~~~~~e~eEhvisIiaSLlr 380 (522)
.+|+.+|..++.. ...+...+.+..++.|..
T Consensus 706 ~~g~I~~Lv~LL~s------------~d~~vq~~A~~aL~NL~~ 737 (810)
T 3now_A 706 IASWLDILHTLIAN------------PSPAVQHRGIVIILNMIN 737 (810)
T ss_dssp STTHHHHHHHHHTC------------SSHHHHHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHCC------------CCHHHHHHHHHHHHHHHh
Confidence 9999999988753 224556677777777766
No 22
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=98.46 E-value=4.5e-05 Score=81.08 Aligned_cols=278 Identities=14% Similarity=0.148 Sum_probs=189.1
Q ss_pred HHHHhhhccccCCCChHHHHhcCChHHHHHhhcCCCc---------------------------------hHH--HHHHH
Q 045086 81 EELEKLKVLAGGPELYPDVVNLNVIPSILGLLSHDNT---------------------------------DIA--IDVVH 125 (522)
Q Consensus 81 ~~Ik~l~~La~~P~LYp~~v~l~~v~sL~~LLsHeNt---------------------------------DIa--i~vi~ 125 (522)
+..+.|..++..|+.--..++.||++.|+++|.++.. +.. .-++.
T Consensus 48 ~~~~~ll~~~~~~~~~~~~~~~g~~p~lv~~l~~~~~~~~~~~~~~~~~~~~~~a~~al~ni~~~~~~~~~~~~~~~~~~ 127 (458)
T 3nmz_A 48 DMSRTLLAMSSSQDSCISMRQSGCLPLLIQLLHGNDKDSVLLGNSRGSKEARARASAALHNIIHSQPDDKRGRREIRVLH 127 (458)
T ss_dssp HHHHHHHHHHSSTTHHHHHHHHTCHHHHHHHHTCTTCCSCC---CCCCHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcHHHHHHHCCCHHHHHHHHhcccccccccccccCCHHHHHHHHHHHHHHHccCcchhHHHHHHHHHH
Confidence 3889999999999865678899999999999986421 221 11222
Q ss_pred Hhhhh---c------------ccc-----cccC-CC---chH---------HHHHHHHHhcChHHHHHHHhhhh----cC
Q 045086 126 LLQDL---T------------DED-----VLED-ND---EPA---------RVLVDALIENNVLELLVQNIQRL----SD 168 (522)
Q Consensus 126 lL~EL---t------------D~d-----~~~e-~~---e~~---------~~Lv~aL~~~~~~~lLv~nL~Rl----dE 168 (522)
+|..+ + +.| +-+. .. ... ...-+.+++.+++..|+.-|..= ..
T Consensus 128 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qAv~aL~nls~~~e~R~~i~~~G~l~~Lv~LL~~~~~~~~~ 207 (458)
T 3nmz_A 128 LLEQIRAYCETCWEWQEAHEPGMDQDKNPMPAPVEHQICPAVCVLMKLSFDEEHRHAMNELGGLQAIAELLQVDCEMYGL 207 (458)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSSSCCCSCC--CCCTTTTHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHHHHHHHHSTT
T ss_pred HHHHhhhhhHHHHHHHHhhccccccccCCccchhhHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHhhhhccccc
Confidence 22221 1 111 0000 00 011 23346778889999888888531 11
Q ss_pred CCCChhHHHHHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChhhhhHHHHHHHHhcC-ChHHHHHhhhh
Q 045086 169 ADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQN-STANQKRLGQM 247 (522)
Q Consensus 169 ~~~~e~e~~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ~-s~~nr~~~~~~ 247 (522)
. .+.....-..++..++-||+.-++.....++...+.++-|.+.++. ....-+.+|+-.|.-|--+ ++.||..+.+.
T Consensus 208 ~-~~~~~~~l~~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~LV~LL~s-~~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~ 285 (458)
T 3nmz_A 208 T-NDHYSITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKS-ESEDLQQVIASVLRNLSWRADVNSKKTLREV 285 (458)
T ss_dssp C-CCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHHHHHHGGGC-SCHHHHHHHHHHHHHHTSSCCHHHHHHHHHT
T ss_pred c-cCCCCHHHHHHHHHHHHHHhCCCcccHHHHHHcCCcHHHHHHHHhC-CCHHHHHHHHHHHHHHhcCCCHHHHHHHHHc
Confidence 1 0223344577889999999975655555565567788999988873 2334477888888888764 67899999999
Q ss_pred chHHHHHHHHhhcccCCCCCCcHHHHHHhHHHHHHHhhC-ChhhHHHHH-HhhhHHHHHHHHhcchh-----hhhhhHHH
Q 045086 248 NGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVLM-PLENKERFV-KAEGVELMIIIMKQKKS-----AYASAIRA 320 (522)
Q Consensus 248 dGiD~LL~~la~YrkrDP~~~eE~E~mENlFd~Lcs~L~-~~~nk~~Fl-~~EGveLM~lmlkekk~-----sr~~AlKv 320 (522)
+||..|++.|.. ....+..++...+|..+-. .++||..+. ..-||...+.+|+.... ....|..+
T Consensus 286 GaI~~LV~lLl~--------s~~~~v~~~A~~aL~nLs~~~~~nk~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~a 357 (458)
T 3nmz_A 286 GSVKALMECALE--------VKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGI 357 (458)
T ss_dssp THHHHHHHHHTT--------CCSHHHHHHHHHHHHHHHHHCHHHHHHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHH
T ss_pred CCHHHHHHHHhc--------CCCHHHHHHHHHHHHHHccCCHHHHHHHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHHH
Confidence 999999998741 1234678899999998887 789999998 78899999999986543 23334444
Q ss_pred HHH---HhcCCcchhhhHHhhhchhhHHHhhhcCCCCcccccchhhhHHHHHHHHHHHHHHhc
Q 045086 321 LDF---AMTKYPPACERFVDVLGLKTAFAAFMGKIPVNKKNKKERYQEELEERLVSLIASLFG 380 (522)
Q Consensus 321 LD~---Al~~~~~~C~~fVe~~GLktlF~~FM~k~~~~k~~kk~~~~~e~eEhvisIiaSLlr 380 (522)
|-. .+++++.+...+++.+|+..|..++... ..+.-++.++.++.|..
T Consensus 358 L~nLs~~~a~~~~~~~~i~~~G~i~~Lv~LL~~~------------~~~v~~~A~~aL~nLa~ 408 (458)
T 3nmz_A 358 LRNVSSLIATNEDHRQILRENNCLQTLLQHLKSH------------SLTIVSNACGTLWNLSA 408 (458)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTHHHHHHHHSSCS------------CHHHHHHHHHHHHHHHS
T ss_pred HHHHHhcccCCHHHHHHHHHcccHHHHHHHHcCC------------ChHHHHHHHHHHHHHHc
Confidence 433 2347788999999999999998877421 12456777888887754
No 23
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=98.37 E-value=3.7e-05 Score=81.29 Aligned_cols=255 Identities=13% Similarity=0.192 Sum_probs=176.0
Q ss_pred ccccCCC-ChHHHHhcCChHHHHHhhc-CCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcChHHHHHHHhhh
Q 045086 88 VLAGGPE-LYPDVVNLNVIPSILGLLS-HDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELLVQNIQR 165 (522)
Q Consensus 88 ~La~~P~-LYp~~v~l~~v~sL~~LLs-HeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~~~lLv~nL~R 165 (522)
.|+..+. -...+++.|+++.|+.+|. ++|+++-..+.-.|.-+..-+. + -..++++++++..||+-|.
T Consensus 103 lLs~~~~~~i~~ii~~G~ip~Lv~lL~~~~~~~~q~~Aa~aL~nia~~~~-----~----~~~~vv~~Gaip~Lv~LL~- 172 (529)
T 3tpo_A 103 LLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTS-----E----QTKAVVDGGAIPAFISLLA- 172 (529)
T ss_dssp HHTSSSCCCHHHHHHTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCH-----H----HHHHHHHTTHHHHHHHHTT-
T ss_pred HHcCCCCchHHHHHHCCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCH-----H----HHHHHHHCCCHHHHHHHHc-
Confidence 4554443 3678899999999999995 6779999888888888865431 1 2356777899999987653
Q ss_pred hcCCCCChhHHHHHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCCh----hhhhHHHHHHHHhcCChHHH
Q 045086 166 LSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDS----NKQYASEILAILLQNSTANQ 241 (522)
Q Consensus 166 ldE~~~~e~e~~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~----Nk~YAsEiLaILLQ~s~~nr 241 (522)
.. +. .-...+...+-||..-.|+....+. ..+.++-|+.-++....+. -...|+-.|+.+..+.....
T Consensus 173 --s~--~~---~v~e~A~~aL~nLa~~~~~~r~~i~-~~g~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~~~~~~~~ 244 (529)
T 3tpo_A 173 --SP--HA---HISEQAVWALGNIAGAGSAFRDLVI-KHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAP 244 (529)
T ss_dssp --CS--CH---HHHHHHHHHHHHHHTTCHHHHHHHH-HTTCHHHHHHTTCSSCGGGSCHHHHHHHHHHHHHHHCCCTTCC
T ss_pred --CC--CH---HHHHHHHHHHHHHhccCHHHHHHHH-HcCCcHHHHHHHhccchhHhHHHHHHHHHHHHHHHHhcccchh
Confidence 22 22 2345677778898876677766665 5678888888887653222 23345666777766554433
Q ss_pred HHhhhhchHHHHHHHHhhcccCCCCCCcHHHHHHhHHHHHHHhhCChhh-HHHHHHhhhHHHHHHHHhcch-hhhhhhHH
Q 045086 242 KRLGQMNGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVLMPLEN-KERFVKAEGVELMIIIMKQKK-SAYASAIR 319 (522)
Q Consensus 242 ~~~~~~dGiD~LL~~la~YrkrDP~~~eE~E~mENlFd~Lcs~L~~~~n-k~~Fl~~EGveLM~lmlkekk-~sr~~AlK 319 (522)
.......++..|.+.+. ....+...+..-||+.+...+++ +..+...-++...+.+|+... ..+..|++
T Consensus 245 ~~~~~~~~lp~L~~LL~---------~~~~~v~~~a~~aL~~l~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~a~~ 315 (529)
T 3tpo_A 245 PLDAVEQILPTLVRLLH---------HNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALR 315 (529)
T ss_dssp CHHHHHHHHHHHHHHTT---------SSCHHHHHHHHHHHHHHHSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHH
T ss_pred hHHHHhhHHHHHHHHhc---------CCcHHHHHHHHHHHHHhhhhhhhhHHHHHhccchHHHHHHhcCCChhHHHHHHH
Confidence 22222345666666552 12346788899999999876654 456778888898888998764 56788899
Q ss_pred HHHHHhcCCcchhhhHHhhhchhhHHHhhhcCCCCcccccchhhhHHHHHHHHHHHHHHhcc
Q 045086 320 ALDFAMTKYPPACERFVDVLGLKTAFAAFMGKIPVNKKNKKERYQEELEERLVSLIASLFGG 381 (522)
Q Consensus 320 vLD~Al~~~~~~C~~fVe~~GLktlF~~FM~k~~~~k~~kk~~~~~e~eEhvisIiaSLlr~ 381 (522)
+|-.-.+++...+..+++.+|+..|..++-.. ..+.-++.+.+++.+..+
T Consensus 316 aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~~~------------~~~i~~~a~~aL~nl~~~ 365 (529)
T 3tpo_A 316 AIGNIVTGTDEQTQKVIDAGALAVFPSLLTNP------------KTNIQKEATWTMSNITAG 365 (529)
T ss_dssp HHHHHTTSCHHHHHHHHHTTGGGGHHHHTTCS------------SHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHccchHHHHHHhhcccHHHHHHHHcCC------------CHHHHHHHHHHHHHHhcc
Confidence 98887777788999999999999998877421 123445677777777653
No 24
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=98.35 E-value=0.00024 Score=79.38 Aligned_cols=285 Identities=13% Similarity=0.078 Sum_probs=195.4
Q ss_pred HHHHHHhhhccccCCCChHHHHhcCChHHHHHhhcCCCchHHHHHHHHhhhhcccccccCCCc-hHHH------------
Q 045086 79 LHEELEKLKVLAGGPELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDE-PARV------------ 145 (522)
Q Consensus 79 Ld~~Ik~l~~La~~P~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e-~~~~------------ 145 (522)
.......+..|+..|+..+.+++.|+++.|+.+|.+.+.++...++..|..|.......+..+ ....
T Consensus 336 ~~~a~~aL~~Ls~~~~~~~~i~~~g~l~~Ll~lL~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~i~~Lv~lL~~~d~~v 415 (780)
T 2z6g_A 336 LWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINV 415 (780)
T ss_dssp HHHHHHHHHHHHTSTTHHHHHHHTTHHHHHGGGTTCSCHHHHHHHHHHHHHHHTTCTTCSCCHHHHHHHHHHTTCSCHHH
T ss_pred HHHHHHHHHHhhcChHHHHHHHHhchHHHHHHHHcCCchHHHHHHHHHHHHHhccchhhhhhhhHHHHHHHHHcCCCHHH
Confidence 345577788888999999999999999999999999999999888888888865432111000 0111
Q ss_pred -----------------HHHHHHhcChHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHHhhhccChhH--HHHHhhhhch
Q 045086 146 -----------------LVDALIENNVLELLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSV--AELVCERTKL 206 (522)
Q Consensus 146 -----------------Lv~aL~~~~~~~lLv~nL~RldE~~~~e~e~~gV~~~L~iiENl~e~~p~~--a~~~~~~t~l 206 (522)
....+++.+++..||+-|..-.+ .+ .-...++..+-||....++. +.......+.
T Consensus 416 r~~A~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~---~~---~v~~~Al~aL~nL~~~~~~~~~~~~~v~~~~~ 489 (780)
T 2z6g_A 416 VTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGD---RE---DITEPAICALRHLTSRHQDAEMAQNAVRLHYG 489 (780)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHHTTTHHHHHHHHHHHHTT---CH---HHHHHHHHHHHHTTSSSTTHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHHccCC---HH---HHHHHHHHHHHHHHhcCchHHHHHHHHHHcCC
Confidence 11223334455555555543211 11 33455667777877655542 2222234567
Q ss_pred HHHHHhhccccCCChhhhhHHHHHHHHhcCChHHHHHhhhhchHHHHHHHHhhc----ccC---------CCCCCcHHHH
Q 045086 207 LRWLLGKIKVREFDSNKQYASEILAILLQNSTANQKRLGQMNGVDVLLQAVAMY----KSK---------DPKTSDEEEM 273 (522)
Q Consensus 207 l~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ~s~~nr~~~~~~dGiD~LL~~la~Y----rkr---------DP~~~eE~E~ 273 (522)
++.|++-++......-+..|+-.|+-|.. ++.++..+.+.++|..|++.+..- |+. =..+..-.+.
T Consensus 490 l~~L~~lL~~~~~~~v~~~A~~aL~nLa~-~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~aa~al~nq~~~~~~~~~~v 568 (780)
T 2z6g_A 490 LPVVVKLLHPPSHWPLIKATVGLIRNLAL-CPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEI 568 (780)
T ss_dssp HHHHHHTTSTTCCHHHHHHHHHHHHHHHS-SHHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTC------CCSTTCCHHHH
T ss_pred HHHHHHHhcCCChHHHHHHHHHHHHHHhc-CHHHHHHHHHCCCHHHHHHHHHhcchhHHHHHhhccccchhhcccChHHH
Confidence 89998888755333456678888888886 567788888888999999887531 110 0112334568
Q ss_pred HHhHHHHHHHhhCChhhHHHHHHhhhHHHHHHHHhcch-hhhhhhHHHHHHHhcCCcchhhhHHhhhchhhHHHhhhcCC
Q 045086 274 LENLFDSLCCVLMPLENKERFVKAEGVELMIIIMKQKK-SAYASAIRALDFAMTKYPPACERFVDVLGLKTAFAAFMGKI 352 (522)
Q Consensus 274 mENlFd~Lcs~L~~~~nk~~Fl~~EGveLM~lmlkekk-~sr~~AlKvLD~Al~~~~~~C~~fVe~~GLktlF~~FM~k~ 352 (522)
.+++-.||+.+...+.|+..+.+..||...+.+++..- ..+..|..+|-.-. ..+++|..|++.+|+..|-.+.-..
T Consensus 569 ~~~a~~aL~~La~~~~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~L~-~~~~~~~~i~~~g~i~~L~~Ll~~~- 646 (780)
T 2z6g_A 569 VEACTGALHILARDIHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELA-QDKEAAEAIEAEGATAPLTELLHSR- 646 (780)
T ss_dssp HHHHHHHHHHHTTSHHHHHHHHHTCCHHHHHHGGGCSCHHHHHHHHHHHHHHH-TSHHHHHHHHHTTCHHHHHHGGGCS-
T ss_pred HHHHHHHHHHHhcChhhHHHHHHCCcHHHHHHHHcCCCHHHHHHHHHHHHHHh-cCHHHHHHHHHCCCHHHHHHHHcCC-
Confidence 89999999999999999999999999999999999763 45666676665533 4577999999999999988875422
Q ss_pred CCcccccchhhhHHHHHHHHHHHHHHhccCC
Q 045086 353 PVNKKNKKERYQEELEERLVSLIASLFGGIL 383 (522)
Q Consensus 353 ~~~k~~kk~~~~~e~eEhvisIiaSLlr~l~ 383 (522)
..+.-++....+..|..+-+
T Consensus 647 -----------~~~Vr~~A~~aL~~l~~~~~ 666 (780)
T 2z6g_A 647 -----------NEGVATYAAAVLFRMSEDKP 666 (780)
T ss_dssp -----------CHHHHHHHHHHHHHHHTTSC
T ss_pred -----------CHHHHHHHHHHHHHHHcCCh
Confidence 23556777888888877654
No 25
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=98.32 E-value=1.6e-05 Score=88.79 Aligned_cols=221 Identities=14% Similarity=0.177 Sum_probs=159.8
Q ss_pred HHhcCChHHHHHhhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHh-cChHHHHHHHhhhhcCCCCChhHHH
Q 045086 99 VVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIE-NNVLELLVQNIQRLSDADSDPDEMA 177 (522)
Q Consensus 99 ~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~-~~~~~lLv~nL~RldE~~~~e~e~~ 177 (522)
.+..|+++.|+.||.|+|..+-..++..|..|...+. .. ..+++ .+++..||+.|.. .. +..
T Consensus 146 ~i~~g~ip~Lv~lL~~~d~~vr~~A~~~L~~L~~~~~------~~----~~i~~~~~~i~~Lv~~L~~--~~-----d~~ 208 (780)
T 2z6g_A 146 ELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEA------SR----HAIMRSPQMVSAIVRTMQN--TN-----DVE 208 (780)
T ss_dssp HHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTSHH------HH----HHHTTCHHHHHHHHHHHHH--CC-----CHH
T ss_pred HHHhCCHHHHHHHHCCCCHHHHHHHHHHHHHHhCCCh------hH----HHHHhccChHHHHHHHHcC--CC-----CHH
Confidence 4457899999999999999999999999998876431 11 12222 2456667766642 11 223
Q ss_pred HHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChhhhhHHHHHHHHhcCChHHHHHhhhhchHHHHHHHH
Q 045086 178 AVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNSTANQKRLGQMNGVDVLLQAV 257 (522)
Q Consensus 178 gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ~s~~nr~~~~~~dGiD~LL~~l 257 (522)
...++...+-||.. .++....++. .+.++.|++.++.. ...-+.+|...|.-|...++.++..+.+.++|..|++.+
T Consensus 209 vr~~Aa~aL~~Ls~-~~~~~~~i~~-~g~I~~Lv~lL~~~-~~~v~~~A~~aL~nLa~~~~~~~~~v~~~g~v~~Lv~lL 285 (780)
T 2z6g_A 209 TARCTSGTLHNLSH-HREGLLAIFK-SGGIPALVNMLGSP-VDSVLFHAITTLHNLLLHQEGAKMAVRLAGGLQKMVALL 285 (780)
T ss_dssp HHHHHHHHHHHHHT-SHHHHHHHHH-TTHHHHHHHHTTCS-CHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGG
T ss_pred HHHHHHHHHHHHhC-CchhHHHHHH-cCCHHHHHHHHcCC-CHHHHHHHHHHHHHHhCCChhhHHHHHHcCCHHHHHHHH
Confidence 44566677777554 5666665664 57999999998764 345688999999999999888998888889999999988
Q ss_pred hhcccCCCCCCcHHHHHHhHHHHHHHhhC-ChhhHHHHHHhhhHHHHHHHHhcchh--hhhhhHHHHHHHhcCCcchhhh
Q 045086 258 AMYKSKDPKTSDEEEMLENLFDSLCCVLM-PLENKERFVKAEGVELMIIIMKQKKS--AYASAIRALDFAMTKYPPACER 334 (522)
Q Consensus 258 a~YrkrDP~~~eE~E~mENlFd~Lcs~L~-~~~nk~~Fl~~EGveLM~lmlkekk~--sr~~AlKvLD~Al~~~~~~C~~ 334 (522)
.. + ..+..+.+.+||+.+.. .+++|..|.+..|++..+.+++.... .+..|..+|-.- +.++.++..
T Consensus 286 ~~-----~----~~~v~~~a~~aL~~La~~~~e~~~~i~~~~~i~~Lv~lL~~~~~~~~~~~a~~aL~~L-s~~~~~~~~ 355 (780)
T 2z6g_A 286 NK-----T----NVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVL-SVCSSNKPA 355 (780)
T ss_dssp GC-----C----CHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHHTTCCCHHHHHHHHHHHHHH-HTSTTHHHH
T ss_pred hc-----C----CHHHHHHHHHHHHHHhcCChHHHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHh-hcChHHHHH
Confidence 53 1 23566777778875554 68999999999999999999986532 222344444432 346779999
Q ss_pred HHhhhchhhHHHhhh
Q 045086 335 FVDVLGLKTAFAAFM 349 (522)
Q Consensus 335 fVe~~GLktlF~~FM 349 (522)
+++.+++..|..++.
T Consensus 356 i~~~g~l~~Ll~lL~ 370 (780)
T 2z6g_A 356 IVEAGGMQALGLHLT 370 (780)
T ss_dssp HHHTTHHHHHGGGTT
T ss_pred HHHhchHHHHHHHHc
Confidence 999999999988774
No 26
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=98.24 E-value=6.2e-05 Score=79.40 Aligned_cols=246 Identities=12% Similarity=0.188 Sum_probs=166.6
Q ss_pred hHHHHhcCChHHHHHhhc-CCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcChHHHHHHHhhhhcCCCCChh
Q 045086 96 YPDVVNLNVIPSILGLLS-HDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELLVQNIQRLSDADSDPD 174 (522)
Q Consensus 96 Yp~~v~l~~v~sL~~LLs-HeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~~~lLv~nL~RldE~~~~e~ 174 (522)
...+|+.|+|+.|+.||. ++|+++-..+.-.|.-+..-+ .+ -..++++++++..||+-|.. . +.
T Consensus 93 i~~ii~~G~ip~LV~lL~~~~~~~lq~~Aa~aL~nias~~-----~e----~~~~vv~~GaIp~Lv~lL~s---~--~~- 157 (510)
T 3ul1_B 93 IDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGT-----SE----QTKAVVDGGAIPAFISLLAS---P--HA- 157 (510)
T ss_dssp HHHHHHTTHHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSC-----HH----HHHHHHHTTHHHHHHHHTTC---S--CH-
T ss_pred HHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCC-----HH----HHHHHHHCCCHHHHHHHHcC---C--CH-
Confidence 468899999999999996 566888777777777775322 12 23566778999999988742 2 22
Q ss_pred HHHHHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCCh----hhhhHHHHHHHHhcCChHHHHHhhhhchH
Q 045086 175 EMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDS----NKQYASEILAILLQNSTANQKRLGQMNGV 250 (522)
Q Consensus 175 e~~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~----Nk~YAsEiLaILLQ~s~~nr~~~~~~dGi 250 (522)
.-...+...+-||..-.|.....+. +.+.++.|+.-++....+. -...|+-.|+.+..+............++
T Consensus 158 --~v~e~A~~aL~nLa~d~~~~r~~v~-~~G~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~~~~~~~~~~~~~~~~l 234 (510)
T 3ul1_B 158 --HISEQAVWALGNIAGDGSAFRDLVI-KHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQIL 234 (510)
T ss_dssp --HHHHHHHHHHHHHHTTCHHHHHHHH-HTTCHHHHHHHTCSSCGGGSCHHHHHHHHHHHHHHHCCCSSCCCHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHhCCHHHHHHHH-HcCChHHHHHHHHhccchhhhHHHHHHHHHHHHHHhhcccchhHHHHHHhHH
Confidence 2345677778888875566666555 5678888888887653221 23345566676666543333222223445
Q ss_pred HHHHHHHhhcccCCCCCCcHHHHHHhHHHHHHHhhCChhhH-HHHHHhhhHHHHHHHHhcch-hhhhhhHHHHHHHhcCC
Q 045086 251 DVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVLMPLENK-ERFVKAEGVELMIIIMKQKK-SAYASAIRALDFAMTKY 328 (522)
Q Consensus 251 D~LL~~la~YrkrDP~~~eE~E~mENlFd~Lcs~L~~~~nk-~~Fl~~EGveLM~lmlkekk-~sr~~AlKvLD~Al~~~ 328 (522)
..|.+.+. .+..+...+..-+|+.+...++++ ..+.+.-++..++.+++... ..+..|+++|-.-.++.
T Consensus 235 p~L~~LL~---------~~~~~v~~~A~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~al~aL~nl~~~~ 305 (510)
T 3ul1_B 235 PTLVRLLH---------HNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGT 305 (510)
T ss_dssp HHHHHHTT---------CSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHh---------cCCHHHHHHHHHHHHHHhhchhhhHHHHHhcccchhhhhhhcCCChhhhhHHHHHHHHhhcCC
Confidence 66665552 123467889999999998766554 56778888999999998764 56888999998877778
Q ss_pred cchhhhHHhhhchhhHHHhhhcCCCCcccccchhhhHHHHHHHHHHHHHHhc
Q 045086 329 PPACERFVDVLGLKTAFAAFMGKIPVNKKNKKERYQEELEERLVSLIASLFG 380 (522)
Q Consensus 329 ~~~C~~fVe~~GLktlF~~FM~k~~~~k~~kk~~~~~e~eEhvisIiaSLlr 380 (522)
..++..+++.+++..|..++-.. ..+.-++.+.+++.|..
T Consensus 306 ~~~~~~i~~~g~l~~L~~LL~~~------------~~~v~~~A~~aL~nl~a 345 (510)
T 3ul1_B 306 DEQTQKVIDAGALAVFPSLLTNP------------KTNIQKEATWTMSNITA 345 (510)
T ss_dssp HHHHHHHHHTTGGGGCC-CTTCS------------SHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhhccchHHHHHHhcCC------------CHHHHHHHHHHHHHHHc
Confidence 88999999999999887766321 12344566666666654
No 27
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=98.22 E-value=5e-05 Score=77.91 Aligned_cols=227 Identities=15% Similarity=0.167 Sum_probs=168.6
Q ss_pred HHHHHHhhhccccCCCChHHHH-hc-CChHHHHHhhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcChH
Q 045086 79 LHEELEKLKVLAGGPELYPDVV-NL-NVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVL 156 (522)
Q Consensus 79 Ld~~Ik~l~~La~~P~LYp~~v-~l-~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~~ 156 (522)
...+...|..|+...+-.+..| .. |+++.|+.||.++|.++...++..|.-|+..+. ++ --..+++.+.+
T Consensus 101 q~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~----~~----~k~~i~~~G~I 172 (354)
T 3nmw_A 101 RRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRAD----VN----SKKTLREVGSV 172 (354)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCC----HH----HHHHHHHTTHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHcCCcHHHHHHHHCCCCHHHHHHHHHHHHHHhccCC----HH----HHHHHHHCCCH
Confidence 3456667888887766566655 44 669999999999999999999999999986420 11 22455677899
Q ss_pred HHHHHHhhhhcCCCCChhHHHHHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCC---hhhhhHHHHHHHH
Q 045086 157 ELLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFD---SNKQYASEILAIL 233 (522)
Q Consensus 157 ~lLv~nL~RldE~~~~e~e~~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d---~Nk~YAsEiLaIL 233 (522)
..||+-|.+-. ++ ....++++.+=||....++....++...+.++-|.+.++...-. .-+..|.=+|.-|
T Consensus 173 p~Lv~lL~~~~----~~---~~~~~A~~aL~nLs~~~~~nk~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nL 245 (354)
T 3nmw_A 173 KALMECALEVK----KE---STLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNV 245 (354)
T ss_dssp HHHHHHHHHCC----CH---HHHHHHHHHHHHHHTTCHHHHHHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCC----CH---HHHHHHHHHHHHHHccChhhhHHHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHH
Confidence 99998875421 21 34456778888887756666677776678899999998754322 2355676777766
Q ss_pred hc---CChHHHHHhhhhchHHHHHHHHhhcccCCCCCCcHHHHHHhHHHHHHHhh-CChhhHHHHHHhhhHHHHHHHHhc
Q 045086 234 LQ---NSTANQKRLGQMNGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVL-MPLENKERFVKAEGVELMIIIMKQ 309 (522)
Q Consensus 234 LQ---~s~~nr~~~~~~dGiD~LL~~la~YrkrDP~~~eE~E~mENlFd~Lcs~L-~~~~nk~~Fl~~EGveLM~lmlke 309 (522)
-. .++++|..+.+.+||..|++.|.. | ..+..+|.--+|+.+. ..++++..+++.-||...+-|++.
T Consensus 246 s~~~a~~~~~~~~i~~~g~i~~Lv~lL~~-----~----~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~i~~Lv~LL~s 316 (354)
T 3nmw_A 246 SSLIATNEDHRQILRENNCLQTLLQHLKS-----H----SLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHS 316 (354)
T ss_dssp HHHHTTCHHHHHHHHTTTHHHHHHHHTTC-----S----CHHHHHHHHHHHHHHTSSCHHHHHHHHHTTHHHHHHTTTTC
T ss_pred HhhccCCHHHHHHHHHcCCHHHHHHHHcC-----C----ChHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHhC
Confidence 65 789999999999999999998841 1 2457889999999888 479999999999999999999987
Q ss_pred ch-hhhhhhHHHHHHHhcCCc
Q 045086 310 KK-SAYASAIRALDFAMTKYP 329 (522)
Q Consensus 310 kk-~sr~~AlKvLD~Al~~~~ 329 (522)
+. ..+..|..+|..-+.+.+
T Consensus 317 ~~~~i~~~A~~aL~nL~~~~~ 337 (354)
T 3nmw_A 317 KHKMIAMGSAAALRNLMANRP 337 (354)
T ss_dssp SSHHHHHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHHHcCCH
Confidence 64 457777777777666543
No 28
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=98.21 E-value=0.00011 Score=66.65 Aligned_cols=180 Identities=12% Similarity=0.098 Sum_probs=143.5
Q ss_pred HHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChhhhhHHHHHHHHhcCChHHHHHhhhhchHHHHHHHH
Q 045086 178 AVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNSTANQKRLGQMNGVDVLLQAV 257 (522)
Q Consensus 178 gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ~s~~nr~~~~~~dGiD~LL~~l 257 (522)
-..+++..+-|+..-.++....+. +.+.++.|++-++.. -..=+.+|...|+-|..+++.++..+.+.+||..|++.+
T Consensus 28 v~~~a~~~L~~l~~~~~~~~~~i~-~~g~i~~L~~lL~~~-~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL 105 (210)
T 4db6_A 28 ELQSALRKLSQIASGGNEQIQAVI-DAGALPALVQLLSSP-NEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLL 105 (210)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHH-HTTHHHHHHHHTTCS-CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHH-HcCCHHHHHHHHcCC-CHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHH
Confidence 345677788888876777777666 457899999998764 223477899999999999999999999999999999998
Q ss_pred hhcccCCCCCCcHHHHHHhHHHHHHHhhC-ChhhHHHHHHhhhHHHHHHHHhcc-hhhhhhhHHHHHHHhcCCcchhhhH
Q 045086 258 AMYKSKDPKTSDEEEMLENLFDSLCCVLM-PLENKERFVKAEGVELMIIIMKQK-KSAYASAIRALDFAMTKYPPACERF 335 (522)
Q Consensus 258 a~YrkrDP~~~eE~E~mENlFd~Lcs~L~-~~~nk~~Fl~~EGveLM~lmlkek-k~sr~~AlKvLD~Al~~~~~~C~~f 335 (522)
.. | ..+..++...+|+.+.. .++++..+++..|+..++.+++.. ...+..|+.+|-.-..+++.++..+
T Consensus 106 ~~-----~----~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~~~~~~~~~ 176 (210)
T 4db6_A 106 SS-----P----NEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAV 176 (210)
T ss_dssp TC-----S----CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred cC-----C----cHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 42 2 35778889999999884 667778899999999999999876 3678888888888777778899999
Q ss_pred HhhhchhhHHHhhhcCCCCcccccchhhhHHHHHHHHHHHHHHhc
Q 045086 336 VDVLGLKTAFAAFMGKIPVNKKNKKERYQEELEERLVSLIASLFG 380 (522)
Q Consensus 336 Ve~~GLktlF~~FM~k~~~~k~~kk~~~~~e~eEhvisIiaSLlr 380 (522)
++.+++..|..++-.. ..+.-++.+..+..|..
T Consensus 177 ~~~g~i~~L~~ll~~~------------~~~v~~~a~~aL~~l~~ 209 (210)
T 4db6_A 177 KEAGALEKLEQLQSHE------------NEKIQKEAQEALEKLQS 209 (210)
T ss_dssp HHTTHHHHHHHGGGCS------------CHHHHHHHHHHHHHHCC
T ss_pred HHCCCHHHHHHHHhCC------------CHHHHHHHHHHHHHHhc
Confidence 9999999998877532 23556777887777754
No 29
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=98.14 E-value=0.0001 Score=76.89 Aligned_cols=186 Identities=12% Similarity=0.093 Sum_probs=138.3
Q ss_pred ChHHHHHhhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcChHHHHHHHhhhhcCCCCChhHHHHHHHHH
Q 045086 104 VIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELLVQNIQRLSDADSDPDEMAAVYNTL 183 (522)
Q Consensus 104 ~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~~~lLv~nL~RldE~~~~e~e~~gV~~~L 183 (522)
.++.|+.+|.++|.++-..++..|+.|+..+ ++.. ..+++.+.+..||+-|.. . ++ .....+.
T Consensus 3 ~l~~lv~~L~s~~~~~q~~A~~~L~~l~~~~-----~~~~----~~i~~~g~i~~Lv~lL~s---~--~~---~~~~~A~ 65 (457)
T 1xm9_A 3 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQD-----ESAK----QQVYQLGGICKLVDLLRS---P--NQ---NVQQAAA 65 (457)
T ss_dssp CHHHHHHHHHSSCTHHHHHHHHHHHHHTSSC-----SSHH----HHHHHTTHHHHHHHHTTS---S--CH---HHHHHHH
T ss_pred CHHHHHHHHCCCCHHHHHHHHHHHHHHHcCC-----hHHH----HHHHHcCCHHHHHHHHcC---C--CH---HHHHHHH
Confidence 5789999999999999999999999998432 1222 345567999999998762 2 22 3456778
Q ss_pred HHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChhhhhHHHHHHHHhcCChHHHHHhhhhchHHHHHHHHhh-c--
Q 045086 184 ATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNSTANQKRLGQMNGVDVLLQAVAM-Y-- 260 (522)
Q Consensus 184 ~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ~s~~nr~~~~~~dGiD~LL~~la~-Y-- 260 (522)
+.+-||..-+|+....++ +.+-++-|++-++...-..-+..|+-.|.-|-.. +++|..+.+ +||..|++.+.. |
T Consensus 66 ~aL~nLa~~~~~~k~~i~-~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~-~~~~~~i~~-g~i~~Lv~ll~~~~s~ 142 (457)
T 1xm9_A 66 GALRNLVFRSTTNKLETR-RQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST-DELKEELIA-DALPVLADRVIIPFSG 142 (457)
T ss_dssp HHHHHHHSSCHHHHHHHH-HTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTS-SSTHHHHHH-HHHHHHHHHTTHHHHT
T ss_pred HHHHHHhcCCHHHHHHHH-HcCCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcC-HHhHHHHHh-ccHHHHHHHHhccccc
Confidence 888898875587777676 5678899998887443334466788888888876 789998888 999999999832 1
Q ss_pred ccCCCC-CC---cHHHHHHhHHHHHHHhhCChhhHHHHHHh-hhHHHHHHHHhc
Q 045086 261 KSKDPK-TS---DEEEMLENLFDSLCCVLMPLENKERFVKA-EGVELMIIIMKQ 309 (522)
Q Consensus 261 rkrDP~-~~---eE~E~mENlFd~Lcs~L~~~~nk~~Fl~~-EGveLM~lmlke 309 (522)
..++|. .. ...++..|..-+|..+-..|++|..+.+. -||+-.+.+|+.
T Consensus 143 ~~~~~~~~~~e~~~~~v~~~a~~aL~nLs~~~~~~~~i~~~~g~i~~Lv~lL~~ 196 (457)
T 1xm9_A 143 WCDGNSNMSREVVDPEVFFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQN 196 (457)
T ss_dssp CC---------CCCHHHHHHHHHHHHHHTTSHHHHHHHTTSTTHHHHHHHHHHH
T ss_pred cccCccchhcccccHHHHHHHHHHHHHHccCHHHHHHHHHcCCCHHHHHHHHHh
Confidence 112221 11 24678889999999988889999999998 678888888875
No 30
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=98.09 E-value=0.0013 Score=68.67 Aligned_cols=303 Identities=13% Similarity=0.080 Sum_probs=191.9
Q ss_pred HHHHHhhhccccCC-CChHHHHhcCChHHHHHhhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcChHHH
Q 045086 80 HEELEKLKVLAGGP-ELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLEL 158 (522)
Q Consensus 80 d~~Ik~l~~La~~P-~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~~~l 158 (522)
-.+...|..|+... ..-..+++.|+++.|+.+|.|+|.++...++..|.-|.-.. ++. -.++++++.+..
T Consensus 20 ~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~-----~~~----k~~i~~~G~i~~ 90 (457)
T 1xm9_A 20 AIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRS-----TTN----KLETRRQNGIRE 90 (457)
T ss_dssp HHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSC-----HHH----HHHHHHTTCHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCC-----HHH----HHHHHHcCCHHH
Confidence 45666777777654 45558899999999999999999999999999999988631 122 245667799999
Q ss_pred HHHHhhhhcCCCCChhHHHHHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccc------c-CC-------Chh-h
Q 045086 159 LVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKV------R-EF-------DSN-K 223 (522)
Q Consensus 159 Lv~nL~RldE~~~~e~e~~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~------k-~~-------d~N-k 223 (522)
||+-|.+- . + ..-..++.+.+-||..- ++....++. +.++-|++-+.. + .. +.+ .
T Consensus 91 Lv~lL~~~--~--~---~~~~~~a~~aL~nLa~~-~~~~~~i~~--g~i~~Lv~ll~~~~s~~~~~~~~~~~e~~~~~v~ 160 (457)
T 1xm9_A 91 AVSLLRRT--G--N---AEIQKQLTGLLWNLSST-DELKEELIA--DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 160 (457)
T ss_dssp HHHHHTTC--C--C---HHHHHHHHHHHHHHHTS-SSTHHHHHH--HHHHHHHHHTTHHHHTCC---------CCCHHHH
T ss_pred HHHHHhhC--C--C---HHHHHHHHHHHHHHhcC-HHhHHHHHh--ccHHHHHHHHhccccccccCccchhcccccHHHH
Confidence 99998642 1 1 23455677888898874 666666664 788888888842 1 11 111 1
Q ss_pred hhHHHHHHHHhcCChHHHHHhhhh-chHHHHHHHHhhc-c--cCCCC---------------------------------
Q 045086 224 QYASEILAILLQNSTANQKRLGQM-NGVDVLLQAVAMY-K--SKDPK--------------------------------- 266 (522)
Q Consensus 224 ~YAsEiLaILLQ~s~~nr~~~~~~-dGiD~LL~~la~Y-r--krDP~--------------------------------- 266 (522)
..|.-.|+-|..+ +++|..+.+. ++|..|++.+..- . +.|+.
T Consensus 161 ~~a~~aL~nLs~~-~~~~~~i~~~~g~i~~Lv~lL~~~~~~~~~~~~~~e~a~~~L~nLs~~~~~~~~~~~~~~~~~~~~ 239 (457)
T 1xm9_A 161 FNATGCLRNLSSA-DAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARN 239 (457)
T ss_dssp HHHHHHHHHHTTS-HHHHHHHTTSTTHHHHHHHHHHHHHHHTCTTCTTHHHHHHHHHHHTTTHHHHSCCHHHHHHHTC--
T ss_pred HHHHHHHHHHccC-HHHHHHHHHcCCCHHHHHHHHHhhccccCCchHHHHHHHHHHHhcccchhccCcchhhhccccccc
Confidence 2677778888876 8899999987 8899999887641 0 01111
Q ss_pred -----------------------------------CC-------------------cHHHHHHhHHHHHHHhhCCh----
Q 045086 267 -----------------------------------TS-------------------DEEEMLENLFDSLCCVLMPL---- 288 (522)
Q Consensus 267 -----------------------------------~~-------------------eE~E~mENlFd~Lcs~L~~~---- 288 (522)
+. ...+..|+.--+|+.+-...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~L~~lL~~~~~~~~~e~a~~aL~nl~~~~~~~~ 319 (457)
T 1xm9_A 240 AYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMS 319 (457)
T ss_dssp --------------------------CCCCCSSCCGGGGGGSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTCSSSHH
T ss_pred ccccccccchhhccchhhhhccccCCccccccCchHHHHHhCcchHHHHHHHHhhcCCHHHHHHHHHHHHHhccCcCcch
Confidence 00 01233333344444433211
Q ss_pred -hh-HHHHHHhhhHHHHHHHHhcch-hhhhhhHHHHHHHhcCCcchhhhHHhhhchhhHHHhhhcCCCCcccccchhhhH
Q 045086 289 -EN-KERFVKAEGVELMIIIMKQKK-SAYASAIRALDFAMTKYPPACERFVDVLGLKTAFAAFMGKIPVNKKNKKERYQE 365 (522)
Q Consensus 289 -~n-k~~Fl~~EGveLM~lmlkekk-~sr~~AlKvLD~Al~~~~~~C~~fVe~~GLktlF~~FM~k~~~~k~~kk~~~~~ 365 (522)
.. |..+.+..|+...+.+|+... ..+.-|..+|-.... ++ -+...|..+|++.|-.++....+. .....
T Consensus 320 ~~~~~~~v~~~~~l~~Lv~LL~~~~~~v~~~A~~aL~nls~-~~-~~~~~i~~~~i~~Lv~lL~~~~~~------~~~~~ 391 (457)
T 1xm9_A 320 SGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR-HP-LLHRVMGNQVFPEVTRLLTSHTGN------TSNSE 391 (457)
T ss_dssp HHHHHHHHTTSCCHHHHHHHTTCSCHHHHHHHHHHHHHHHT-SG-GGHHHHHHHTHHHHHHTTTSCCSC------STTHH
T ss_pred HHHHHHHHHHcCCchHHHHHHhCCCHhHHHHHHHHHHHHhc-CH-HHHHHHHHhhhHHHHHhccCCCCC------CCCcH
Confidence 12 445667899999999998764 456666666666544 34 344567788999998888653221 11223
Q ss_pred HHHHHHHHHHHHHhccCCCcchHHHHHHHhhhhhhHHHHHHHHHHHH-HHHHHH
Q 045086 366 ELEERLVSLIASLFGGILRGSRRERLLSKFIENECEKIDRLMELYMR-YSDRVR 418 (522)
Q Consensus 366 e~eEhvisIiaSLlr~l~~~s~r~RlLaKFvE~d~EKvdRL~eL~~~-Y~~rv~ 418 (522)
+.-..++.+++.++..- ....+. ++ ++.=+++|++|-.. |..++.
T Consensus 392 ~v~~~~l~~l~ni~~~~---~~~~~~----i~-~~g~l~~L~~L~~~~~~~~i~ 437 (457)
T 1xm9_A 392 DILSSACYTVRNLMASQ---PQLAKQ----YF-SSSMLNNIINLCRSSASPKAA 437 (457)
T ss_dssp HHHHHHHHHHHHHHTTC---THHHHH----HC-CHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHHhcC---HHHHHH----HH-HcCCHHHHHHHHcCCCcHHHH
Confidence 45567778888777542 222222 22 34566666666554 244444
No 31
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=97.88 E-value=0.00055 Score=75.93 Aligned_cols=256 Identities=15% Similarity=0.206 Sum_probs=183.3
Q ss_pred hHHHHHHhhhccccCCCChHHHHhcCChHHHHHhhcCC--CchHHHHHHHHhhhhcccccccC--------CCchHHHHH
Q 045086 78 DLHEELEKLKVLAGGPELYPDVVNLNVIPSILGLLSHD--NTDIAIDVVHLLQDLTDEDVLED--------NDEPARVLV 147 (522)
Q Consensus 78 dLd~~Ik~l~~La~~P~LYp~~v~l~~v~sL~~LLsHe--NtDIai~vi~lL~ELtD~d~~~e--------~~e~~~~Lv 147 (522)
|=-+++..|+-+|. -||.-|-.++++.|++.|..+ +.||+-.|++.|--++.++..++ .++-...+.
T Consensus 38 DRR~Av~~Lk~~sk---~y~~~Vg~~~l~~li~~L~~d~~D~e~v~~~LetL~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (651)
T 3grl_A 38 DRRNAVRALKSLSK---KYRLEVGIQAMEHLIHVLQTDRSDSEIIGYALDTLYNIISNDEEEEVEENSTRQSEDLGSQFT 114 (651)
T ss_dssp HHHHHHHHHHHTTT---TTTTHHHHHTHHHHHHHHHSCTTCHHHHHHHHHHHHHHHCCC--------------CHHHHHH
T ss_pred HHHHHHHHHHHHHH---HhHHHhhhhhHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcccccccccccchHHHHHHH
Confidence 33467888888873 499999999999999999764 77789999999977776654322 122334577
Q ss_pred HHHHhc-ChHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHHhhhccChh-HHHHHhhhhchHHHHHhhcccc-CCChhhh
Q 045086 148 DALIEN-NVLELLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPS-VAELVCERTKLLRWLLGKIKVR-EFDSNKQ 224 (522)
Q Consensus 148 ~aL~~~-~~~~lLv~nL~RldE~~~~e~e~~gV~~~L~iiENl~e~~p~-~a~~~~~~t~ll~wLL~Ri~~k-~~d~Nk~ 224 (522)
|.++.. +.+.+|++-|+ + .+..--++++.+++.|+.-+|+ +-+.+.....=++-|..-+..+ +.=.|
T Consensus 115 d~f~~~~~~i~~Ll~lL~---~-----~df~vR~~alqlL~~L~~~r~~~~Q~~Il~~p~gi~~Lv~lL~d~rE~iRn-- 184 (651)
T 3grl_A 115 EIFIKQQENVTLLLSLLE---E-----FDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLADSREVIRN-- 184 (651)
T ss_dssp HHHHHSTHHHHHHHHHTT---C-----CCHHHHHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGGCSSHHHHH--
T ss_pred HHHHcCCccHHHHHHHhc---C-----ccHHHHHHHHHHHHHHHhcCcHHHHHHHHhCcccHHHHHHHHhCchHHHHH--
Confidence 777665 44567777652 2 3456677899999999999998 6666665555677888888753 34444
Q ss_pred hHHHHHHHHhcCChHHHHHhhhhchHHHHHHHHhhcccCCCCCCcHHHHHHhHHHHHHHhhC-ChhhHHHHHHhhhHHHH
Q 045086 225 YASEILAILLQNSTANQKRLGQMNGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVLM-PLENKERFVKAEGVELM 303 (522)
Q Consensus 225 YAsEiLaILLQ~s~~nr~~~~~~dGiD~LL~~la~YrkrDP~~~eE~E~mENlFd~Lcs~L~-~~~nk~~Fl~~EGveLM 303 (522)
=|.=+|+-|..++.+.++.+.-.+|+|.|..++..= - +.+=-..++.++-+|+.+|. .+.|+..|++.-|+.-.
T Consensus 185 eallLL~~Lt~~n~~iQklVAFEnaFe~Lf~Ii~~E---g--~~~Ggivv~DCL~ll~nLLr~N~sNQ~~FrEt~~i~~L 259 (651)
T 3grl_A 185 DGVLLLQALTRSNGAIQKIVAFENAFERLLDIITEE---G--NSDGGIVVEDCLILLQNLLKNNNSNQNFFKEGSYIQRM 259 (651)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHH---T--GGGSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCGGGG
T ss_pred HHHHHHHHHhcCCHHHHHHHHHhccHHHHHHHHHhc---C--CCccchhHHHHHHHHHHHHhcCHHHHHHHHHcCCHHHH
Confidence 355578888999999998888889999999998631 1 12334678999999999996 56699999999999988
Q ss_pred HHHHhcch----------hhhhhhHHHHHHHhcCC-----cchhhh-HHhhhchhhHHHhhhcC
Q 045086 304 IIIMKQKK----------SAYASAIRALDFAMTKY-----PPACER-FVDVLGLKTAFAAFMGK 351 (522)
Q Consensus 304 ~lmlkekk----------~sr~~AlKvLD~Al~~~-----~~~C~~-fVe~~GLktlF~~FM~k 351 (522)
..+++-+. .--..++.++.--++++ ...|++ |.+.+|+..|..+.|..
T Consensus 260 ~~LL~~~~~~~~W~~Qk~~N~~~~L~iIrlLv~~~~~~~~t~~nQ~~~~~~g~l~~Ll~ll~~~ 323 (651)
T 3grl_A 260 KPWFEVGDENSGWSAQKVTNLHLMLQLVRVLVSPNNPPGATSSCQKAMFQCGLLQQLCTILMAT 323 (651)
T ss_dssp GGGGCCCSCSSCCCHHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHTTHHHHHHHHHTCS
T ss_pred HHHhCCCccccccHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHCCCHHHHHHHHccC
Confidence 77776331 11233556666555542 234554 88999999999998864
No 32
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=97.75 E-value=0.0013 Score=65.97 Aligned_cols=194 Identities=16% Similarity=0.199 Sum_probs=137.9
Q ss_pred HhhHHHHHHhhhccc---cCCCChHHHHhcCChHHHHH-hhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHH
Q 045086 76 EVDLHEELEKLKVLA---GGPELYPDVVNLNVIPSILG-LLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALI 151 (522)
Q Consensus 76 E~dLd~~Ik~l~~La---~~P~LYp~~v~l~~v~sL~~-LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~ 151 (522)
+.++++-+.++..|+ ..++.=..|++.|+++.|+. ||.|+|.+|...++..|.-+...+ ++ .-+.++
T Consensus 51 ~~~~e~k~~Al~~L~~lv~~~dna~~~~~~G~l~~Lv~~lL~s~~~~vr~~Aa~~Lg~ia~~n-----~~----~~~~vv 121 (296)
T 1xqr_A 51 AADQQEREGALELLADLCENMDNAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNV-----AA----IQEQVL 121 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTC-----HH----HHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhChhhHHHHHHcCCHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCC-----HH----HHHHHH
Confidence 455666555555555 44454456899999999999 999999999999999999887543 11 224566
Q ss_pred hcChHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChhhhhHHHHHH
Q 045086 152 ENNVLELLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILA 231 (522)
Q Consensus 152 ~~~~~~lLv~nL~RldE~~~~e~e~~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLa 231 (522)
+.+++..|++-|.. +. +.. ..-+++..+=|++.-.|.....+.. .+.++.|.+-++.. -..-+..|+-.|+
T Consensus 122 ~~g~l~~Ll~LL~~--~~--~~~---v~~~A~~ALsnl~~~~~~~~~~~~~-~ggi~~L~~lL~~~-d~~v~~~A~~aLs 192 (296)
T 1xqr_A 122 GLGALRKLLRLLDR--DA--CDT---VRVKALFAISCLVREQEAGLLQFLR-LDGFSVLMRAMQQQ-VQKLKVKSAFLLQ 192 (296)
T ss_dssp HTTHHHHHHHHHHH--CS--CHH---HHHHHHHHHHHHHTTCHHHHHHHHH-TTHHHHHHHHHHSS-CHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHcc--CC--CHH---HHHHHHHHHHHHHcCCcHHHHHHHH-CCCHHHHHHHHcCC-CHHHHHHHHHHHH
Confidence 77999999988853 22 322 2334555555777646665555553 46788888887754 2344677888899
Q ss_pred HHhcCChHHHHHhhhhchHHHHHHHHhhcccCCCCCCcHHHHHHhHHHHHHHhhCC-hhhHHHHHH
Q 045086 232 ILLQNSTANQKRLGQMNGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVLMP-LENKERFVK 296 (522)
Q Consensus 232 ILLQ~s~~nr~~~~~~dGiD~LL~~la~YrkrDP~~~eE~E~mENlFd~Lcs~L~~-~~nk~~Fl~ 296 (522)
-|..++++.+..+.+.++|..|...|.. . ..+..+....+|++++.. +.++..|..
T Consensus 193 ~L~~~~~~~~~~vv~~g~i~~Lv~LL~~---~------d~~v~~~al~aL~~l~~~~~~~~~~~~~ 249 (296)
T 1xqr_A 193 NLLVGHPEHKGTLCSMGMVQQLVALVRT---E------HSPFHEHVLGALCSLVTDFPQGVRECRE 249 (296)
T ss_dssp HHHHHCGGGHHHHHHTTHHHHHHHHHTS---C------CSTHHHHHHHHHHHHHTTCHHHHHHHHC
T ss_pred HHHhCChHHHHHHHHcCCHHHHHHHHcC---C------ChhHHHHHHHHHHHHHhCChhHHHHHhc
Confidence 9999999999999999999999998852 1 236778889999888865 445555544
No 33
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=97.58 E-value=0.0031 Score=69.20 Aligned_cols=247 Identities=12% Similarity=0.149 Sum_probs=168.6
Q ss_pred HHHHHhhhccccCCCChHHHHhcCChHHHHHhhc------------------CCCchHHHHHHHHhhhhcccccccCCCc
Q 045086 80 HEELEKLKVLAGGPELYPDVVNLNVIPSILGLLS------------------HDNTDIAIDVVHLLQDLTDEDVLEDNDE 141 (522)
Q Consensus 80 d~~Ik~l~~La~~P~LYp~~v~l~~v~sL~~LLs------------------HeNtDIai~vi~lL~ELtD~d~~~e~~e 141 (522)
..+...|..||.+|+.=..+++ ++++.|+.||. .+..++..-+...|+.|+-.+ ++
T Consensus 152 e~aa~aL~nLS~~~~~k~~I~~-~alp~Lv~LL~~p~sg~~~~~~~~~k~~~~~d~~V~~nAa~~L~NLs~~~-----~~ 225 (584)
T 3l6x_A 152 EVITGTLWNLSSHDSIKMEIVD-HALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSER-----SE 225 (584)
T ss_dssp HHHHHHHHHHTTSGGGHHHHHH-HTHHHHHHHTHHHHHCCC----------CCCCHHHHHHHHHHHHHHTSSC-----HH
T ss_pred HHHHHHHHHHhCCchhhHHHHh-ccHHHHHHHHhcccccccccccccccccccccHHHHHHHHHHHHHHhcCC-----HH
Confidence 3444577888889987666775 67999999983 224578888888999988532 12
Q ss_pred hHHHHHHHHHhcChHHHHHHHhhhh-cCCCCChhHHHHHHHHHHHHHhhhccChh--------H----------------
Q 045086 142 PARVLVDALIENNVLELLVQNIQRL-SDADSDPDEMAAVYNTLATIENLIEVKPS--------V---------------- 196 (522)
Q Consensus 142 ~~~~Lv~aL~~~~~~~lLv~nL~Rl-dE~~~~e~e~~gV~~~L~iiENl~e~~p~--------~---------------- 196 (522)
.-..+++ ..++++.||..|..- .. .+.+...+.|++.++-||.. +.+ +
T Consensus 226 ~R~~i~~---~~Gli~~LV~~L~~~~~~---~~~~~~~~enav~aL~NLs~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 298 (584)
T 3l6x_A 226 ARRKLRE---CDGLVDALIFIVQAEIGQ---KDSDSKLVENCVCLLRNLSY-QVHREIPQAERYQEAAPNVANNTGTSPA 298 (584)
T ss_dssp HHHHHHH---STTHHHHHHHHHHHHHHT---TCCSCHHHHHHHHHHHHHHT-THHHHSTTCCC--------------CCC
T ss_pred HHHHHHH---cCCcHHHHHHHHHHhhcc---cCccHHHHHHHHHHHHHhhc-cccccccchhhhhhhcccccccccccCc
Confidence 2222222 145667788877532 11 12233578888888888764 210 0
Q ss_pred --HHHHhhhhchHHHHHhhccccCCChhhhhHHHHHHHHhcCC----hHHHHHhhhhchHHHHHHHHhhcccCCCCCCcH
Q 045086 197 --AELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNS----TANQKRLGQMNGVDVLLQAVAMYKSKDPKTSDE 270 (522)
Q Consensus 197 --a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ~s----~~nr~~~~~~dGiD~LL~~la~YrkrDP~~~eE 270 (522)
.+.++ +++.++-|+.-++...-...+..|+-.|+-|.-+. ..+|..+.+..|+..|...|.. | +
T Consensus 299 ~Gve~L~-~~~~v~~Ll~LL~~s~~~~v~E~Aa~AL~nL~ag~~~~~~~~~~~v~~~~glp~Lv~LL~s-----~---~- 368 (584)
T 3l6x_A 299 RGYELLF-QPEVVRIYISLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTN-----E---H- 368 (584)
T ss_dssp CGGGGGG-SHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHSSCSHHHHHHHHHHTSHHHHHHHHHGGGC-----S---C-
T ss_pred hhHHHHh-cccHHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCccccHHHHHHHHHcCcHHHHHHHHcC-----C---C-
Confidence 01111 23345556666655444556778888888886554 4567777788999998888731 1 1
Q ss_pred HHHHHhHHHHHHHhhCChhhHHHHHHhhhHHHHHHHHhcch---------hhhhhhHHHHHHHhcCCcchhhhHHhhhch
Q 045086 271 EEMLENLFDSLCCVLMPLENKERFVKAEGVELMIIIMKQKK---------SAYASAIRALDFAMTKYPPACERFVDVLGL 341 (522)
Q Consensus 271 ~E~mENlFd~Lcs~L~~~~nk~~Fl~~EGveLM~lmlkekk---------~sr~~AlKvLD~Al~~~~~~C~~fVe~~GL 341 (522)
.+..++.--+|..+-..+.|+..+ ...||.-.+.+|.... .....|+.+|---+++.+.+...+++.+|+
T Consensus 369 ~~v~~~A~~aL~nLs~~~~~~~~I-~~g~ip~LV~LL~~~~~~~~~~~s~~v~~~a~~tL~NL~a~~~~~~~~I~~~g~I 447 (584)
T 3l6x_A 369 ERVVKAASGALRNLAVDARNKELI-GKHAIPNLVKNLPGGQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGI 447 (584)
T ss_dssp HHHHHHHHHHHHHHHTTCSCHHHH-HHHHHHHHHHTSSSSSCSGGGTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHHHHhCChhHHHHH-HhCCHHHHHHHhcCCcccccccchHHHHHHHHHHHHHHhcCCHHHHHHHHHCCCh
Confidence 278889999999999999999866 6789988888887642 124567888877777788999999999999
Q ss_pred hhHHHhhhc
Q 045086 342 KTAFAAFMG 350 (522)
Q Consensus 342 ktlF~~FM~ 350 (522)
..|..+.-.
T Consensus 448 ~~Lv~LL~s 456 (584)
T 3l6x_A 448 EKLVLINKS 456 (584)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhC
Confidence 999998853
No 34
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=97.52 E-value=0.0029 Score=71.85 Aligned_cols=264 Identities=12% Similarity=0.059 Sum_probs=182.4
Q ss_pred HHHHHhhhccccCCCChHHHHhcCChHHHHHhhcCCCchHHHHHHHHhhhhc---ccccccCCCchHHHHHHHHHhcChH
Q 045086 80 HEELEKLKVLAGGPELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLT---DEDVLEDNDEPARVLVDALIENNVL 156 (522)
Q Consensus 80 d~~Ik~l~~La~~P~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELt---D~d~~~e~~e~~~~Lv~aL~~~~~~ 156 (522)
..+...|..||..|+.=..+++.|+++.|+.||.......-..+...|.-|+ +++..... . .. .+++
T Consensus 513 e~Aa~aL~NLA~d~~~r~~Vv~~Gaip~Lv~LL~s~~~~~k~~Aa~AL~nL~~~~~p~~~~~~--~------~~--~~aI 582 (810)
T 3now_A 513 ELIARVLNAVCGLKELRGKVVQEGGVKALLRMALEGTEKGKRHATQALARIGITINPEVSFSG--Q------RS--LDVI 582 (810)
T ss_dssp HHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHTTT--H------HH--HHTH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHccCCHHHHHHHHHHHHHHhcCCChhhhhcc--h------hh--hcHH
Confidence 3456667778888887777889999999999998877766555555555553 33322110 0 00 1255
Q ss_pred HHHHHHhhhhcCCCCChhHHHHHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChhhhhHHHHHHHHhcC
Q 045086 157 ELLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQN 236 (522)
Q Consensus 157 ~lLv~nL~RldE~~~~e~e~~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ~ 236 (522)
..|++-|. . + ......++++..+-||.+..++....++. .+.++-|..-+... -..-+..|.++|+-|..+
T Consensus 583 ppLv~LL~----~--~-~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~-aG~l~~Lv~LL~s~-~~~Vq~~A~~~L~NLa~~ 653 (810)
T 3now_A 583 RPLLNLLQ----Q--D-CTALENFESLMALTNLASMNESVRQRIIK-EQGVSKIEYYLMED-HLYLTRAAAQCLCNLVMS 653 (810)
T ss_dssp HHHHHTTS----T--T-SCHHHHHHHHHHHHHHTTSCHHHHHHHHH-TTHHHHHHHHHHSC-CTTHHHHHHHHHHHHTTS
T ss_pred HHHHHHhC----C--C-CcHHHHHHHHHHHHHHhcCCHHHHHHHHH-cCCHHHHHHHHcCC-CHHHHHHHHHHHHHHhCC
Confidence 66666553 1 1 12345567889999999977788877775 45677777776643 234577899999999984
Q ss_pred ChHHHHHhhh-hchHHHHHHHHhhcccCCCCCCcHHHHHHhHHHHHHHhhC-ChhhHHHHHH-hhhHHHHHHHHhcch-h
Q 045086 237 STANQKRLGQ-MNGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVLM-PLENKERFVK-AEGVELMIIIMKQKK-S 312 (522)
Q Consensus 237 s~~nr~~~~~-~dGiD~LL~~la~YrkrDP~~~eE~E~mENlFd~Lcs~L~-~~~nk~~Fl~-~EGveLM~lmlkekk-~ 312 (522)
++++..+.. .+++..|++.+.. +..+--+..--+|+.+-. .+.+...+++ .-|++..+.|++..- .
T Consensus 654 -~~~~~~~v~~~g~l~~Lv~LL~s---------~d~~vq~~Aa~ALanLt~~s~~~~~~ii~~~g~I~~Lv~LL~s~d~~ 723 (810)
T 3now_A 654 -EDVIKMFEGNNDRVKFLALLCED---------EDEETATACAGALAIITSVSVKCCEKILAIASWLDILHTLIANPSPA 723 (810)
T ss_dssp -HHHHHHHHSSSSHHHHHHHGGGC---------SSHHHHHHHHHHHHHHHHHCHHHHHHHHTSTTHHHHHHHHHTCSSHH
T ss_pred -hHHHHHHHhccCcHHHHHHHhcC---------CCHHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHCCCCHH
Confidence 567777774 4667777776632 223455555677777766 6778888888 889999999999764 5
Q ss_pred hhhhhHHHHHHHhcCCcchhhhHHhhhchhhHHHhhhcCCCCcccccchhhhHHHHHHHHHHHHHHhcc
Q 045086 313 AYASAIRALDFAMTKYPPACERFVDVLGLKTAFAAFMGKIPVNKKNKKERYQEELEERLVSLIASLFGG 381 (522)
Q Consensus 313 sr~~AlKvLD~Al~~~~~~C~~fVe~~GLktlF~~FM~k~~~~k~~kk~~~~~e~eEhvisIiaSLlr~ 381 (522)
.+..|+.+|-..++++++....+++.+|+..|..++-.+- ....+.-|-...++.+++.+
T Consensus 724 vq~~A~~aL~NL~~~s~e~~~~l~e~G~i~~L~~LL~~~d---------~~~~~i~e~Al~aL~~ll~~ 783 (810)
T 3now_A 724 VQHRGIVIILNMINAGEEIAKKLFETDIMELLSGLGQLPD---------DTRAKAREVATQCLAAAERY 783 (810)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTSTHHHHHTTSCCCTT---------STTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHhCcc---------cCcHHHHHHHHHHHHHHHhC
Confidence 6888888888887777788999999999999988874210 01245666777777777654
No 35
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=97.41 E-value=0.0023 Score=72.42 Aligned_cols=264 Identities=11% Similarity=0.149 Sum_probs=175.9
Q ss_pred HHHhcCChHHHHHhhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcChHHHHHHHhhhhcCCCCChhHHH
Q 045086 98 DVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELLVQNIQRLSDADSDPDEMA 177 (522)
Q Consensus 98 ~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~~~lLv~nL~RldE~~~~e~e~~ 177 (522)
.+++.|+++.|+.||+|++..+-..++.+|.-|+-.. +. -..+++++.+..|++-|..-.+. .+ .
T Consensus 452 ~l~eaGvIp~Lv~Ll~S~s~~~re~A~~aL~nLS~d~------~~----R~~lvqqGal~~LL~lL~s~~~~--~~---~ 516 (778)
T 3opb_A 452 YILRTELISFLKREMHNLSPNCKQQVVRIIYNITRSK------NF----IPQLAQQGAVKIILEYLANKQDI--GE---P 516 (778)
T ss_dssp HTTTTTHHHHHHHHGGGSCHHHHHHHHHHHHHHHTSG------GG----HHHHHHTTHHHHHHHHTTCC-----CC---H
T ss_pred HHHHCcCHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH------HH----HHHHHHCCCHHHHHHHHhcCCCc--ch---H
Confidence 4568899999999999999999999999999997431 22 25566778888888887654332 11 1
Q ss_pred HHHHHHHHHHhhh-ccChhHHHHHhh--hhchHHHHHhhccc-cCCCh---------h---hhhHHHHHHHHhcCC----
Q 045086 178 AVYNTLATIENLI-EVKPSVAELVCE--RTKLLRWLLGKIKV-REFDS---------N---KQYASEILAILLQNS---- 237 (522)
Q Consensus 178 gV~~~L~iiENl~-e~~p~~a~~~~~--~t~ll~wLL~Ri~~-k~~d~---------N---k~YAsEiLaILLQ~s---- 237 (522)
+=.++...+=||+ +.+|.++ +.. ..+-++-|+.-+.. ...+. + +.-|.=-|.=|...+
T Consensus 517 ~k~~AA~ALArLlis~np~~~--f~~~~~~~aI~pLv~LL~~~~~~~~~~l~~~~~~~~l~~feAL~ALTNLAs~~~n~~ 594 (778)
T 3opb_A 517 IRILGCRALTRMLIFTNPGLI--FKKYSALNAIPFLFELLPRSTPVDDNPLHNDEQIKLTDNYEALLALTNLASSETSDG 594 (778)
T ss_dssp HHHHHHHHHHHHHHTSCHHHH--SSSSCSTTHHHHHHHTSCCSSSCSSCC---CCCCCHHHHHHHHHHHHHHHHCCSHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHH--cCCCccccchHHHHHHcCCCCCcccccccccccccHHHHHHHHHHHHHHhcCCcccc
Confidence 2234444455544 5577764 211 12567777777763 22211 0 223334466677765
Q ss_pred hHHHHHhhh-hchHHHHHHHHhhcccCCCCCCcHHHHHHhHHHHHHHhhCChhhH-HHHHHh------hhHHHHHHHHhc
Q 045086 238 TANQKRLGQ-MNGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVLMPLENK-ERFVKA------EGVELMIIIMKQ 309 (522)
Q Consensus 238 ~~nr~~~~~-~dGiD~LL~~la~YrkrDP~~~eE~E~mENlFd~Lcs~L~~~~nk-~~Fl~~------EGveLM~lmlke 309 (522)
++.|.++.+ .+++..|...+. + +-...-.....++|.+...|++. ++|... .|+++++.|+..
T Consensus 595 E~~r~~Ii~~~ga~~~L~~LL~--------s-~n~~VrrAA~elI~NL~~~~e~i~~k~~~~~~~~~~~rL~lLV~Ll~s 665 (778)
T 3opb_A 595 EEVCKHIVSTKVYWSTIENLML--------D-ENVPLQRSTLELISNMMSHPLTIAAKFFNLENPQSLRNFNILVKLLQL 665 (778)
T ss_dssp HHHHHHHHHSHHHHHHHHHGGG--------C-SSHHHHHHHHHHHHHHHTSGGGTGGGTSCCSSHHHHHHHHHHHHGGGC
T ss_pred hHHHHHHHHhcCHHHHHHHHHh--------C-CCHHHHHHHHHHHHHHhCCcHHHHHHHHhhcCchhhccHHHHHHHHcC
Confidence 345766665 477888877763 1 11245567889999999999986 466432 369999999987
Q ss_pred c-hhhhhhhHHHHHHHhcCCcchhhhHHhh-hchhhHHHhhhcCCCCcccccchhhhHHHHHHHHHHHHHHhccCCCcch
Q 045086 310 K-KSAYASAIRALDFAMTKYPPACERFVDV-LGLKTAFAAFMGKIPVNKKNKKERYQEELEERLVSLIASLFGGILRGSR 387 (522)
Q Consensus 310 k-k~sr~~AlKvLD~Al~~~~~~C~~fVe~-~GLktlF~~FM~k~~~~k~~kk~~~~~e~eEhvisIiaSLlr~l~~~s~ 387 (522)
. --.|..|.-.|-.+.++.+.+|..+|+. .|...+..+|-.- ....+.-.+.+.++.+|..+.|.+-.
T Consensus 666 ~D~~~r~AAagALAnLts~~~~ia~~ll~~~~gi~~Ll~lL~~~----------~~~~~l~~R~~~~l~NL~~~~~~~~~ 735 (778)
T 3opb_A 666 SDVESQRAVAAIFANIATTIPLIAKELLTKKELIENAIQVFADQ----------IDDIELRQRLLMLFFGLFEVIPDNGT 735 (778)
T ss_dssp SCHHHHHHHHHHHHHHHHHCHHHHHHHTTCHHHHHHHHHHHHHT----------TTCHHHHHHHHHHHHHHHTTCCSTTT
T ss_pred CCHHHHHHHHHHHHHhcCCChHHHHHHHHccccHHHHHHHHhcc----------CCCHHHHHHHHHHHHHHHHhhccCCC
Confidence 5 3566677777777777788899999998 7999999999642 12356778899999999986653222
Q ss_pred HHHHHHHhhhh
Q 045086 388 RERLLSKFIEN 398 (522)
Q Consensus 388 r~RlLaKFvE~ 398 (522)
.+.+.+|++|
T Consensus 736 -~~~~~~~~~~ 745 (778)
T 3opb_A 736 -NEVYPLLQEN 745 (778)
T ss_dssp -TSCCHHHHSC
T ss_pred -hHHHHHHhcC
Confidence 2455566553
No 36
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=97.36 E-value=0.0069 Score=66.44 Aligned_cols=189 Identities=13% Similarity=0.138 Sum_probs=131.5
Q ss_pred hcCChHHHHHhhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcChHHHHHHHhhhhcCCCCChhHHHHHH
Q 045086 101 NLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELLVQNIQRLSDADSDPDEMAAVY 180 (522)
Q Consensus 101 ~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~~~lLv~nL~RldE~~~~e~e~~gV~ 180 (522)
+.+.++.|+.+|.++|.++-..+...|+-|+-.+ ++. -..+++.+.+..||+-|..= + ...-.
T Consensus 46 ~~~~i~~LV~~L~s~~~~~q~~Aa~~L~~La~~~-----~~~----k~~V~~~G~Ip~LV~LL~s~-----~---~~vq~ 108 (584)
T 3l6x_A 46 RQPELPEVIAMLGFRLDAVKSNAAAYLQHLCYRN-----DKV----KTDVRKLKGIPVLVGLLDHP-----K---KEVHL 108 (584)
T ss_dssp CCCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTTC-----HHH----HHHHHHTTHHHHHHHGGGCS-----S---HHHHH
T ss_pred ccccHHHHHHHHCCCCHHHHHHHHHHHHHHHcCC-----hHH----HHHHHHcCCcHHHHHHHCCC-----C---HHHHH
Confidence 5788999999999999999887778887776432 112 24455678999999988532 2 23445
Q ss_pred HHHHHHHhhhcc-ChhHHHHHhhhhchHHHHHhhccccCCChhhhhHHHHHHHHhcCChHHHHHhhhhchHHHHHHHH-h
Q 045086 181 NTLATIENLIEV-KPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNSTANQKRLGQMNGVDVLLQAV-A 258 (522)
Q Consensus 181 ~~L~iiENl~e~-~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ~s~~nr~~~~~~dGiD~LL~~l-a 258 (522)
++.+.+-||... +++....++ +.+-++-|++-++......-+..|+-.|.-|-- +++|+..+.+ .||..|.+.+ .
T Consensus 109 ~Aa~AL~nLa~~~~~~nk~~I~-~~GaIp~LV~LL~s~~~~~~~e~aa~aL~nLS~-~~~~k~~I~~-~alp~Lv~LL~~ 185 (584)
T 3l6x_A 109 GACGALKNISFGRDQDNKIAIK-NCDGVPALVRLLRKARDMDLTEVITGTLWNLSS-HDSIKMEIVD-HALHALTDEVII 185 (584)
T ss_dssp HHHHHHHHHTSSSCHHHHHHHH-HTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTT-SGGGHHHHHH-HTHHHHHHHTHH
T ss_pred HHHHHHHHHHccCCHHHHHHHH-HcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHhC-CchhhHHHHh-ccHHHHHHHHhc
Confidence 667777888864 466655555 456788888888753322335566667777754 7889988884 7999999965 3
Q ss_pred hc---ccCC-----CCCCcHHHHHHhHHHHHHHhhCCh-hhHHHHHHhhhH-HHHHHHHhc
Q 045086 259 MY---KSKD-----PKTSDEEEMLENLFDSLCCVLMPL-ENKERFVKAEGV-ELMIIIMKQ 309 (522)
Q Consensus 259 ~Y---rkrD-----P~~~eE~E~mENlFd~Lcs~L~~~-~nk~~Fl~~EGv-eLM~lmlke 309 (522)
+| ...+ +.+.+..+..+|.-.||..+-... ++|...++..|+ +..+.+++.
T Consensus 186 p~sg~~~~~~~~~k~~~~~d~~V~~nAa~~L~NLs~~~~~~R~~i~~~~Gli~~LV~~L~~ 246 (584)
T 3l6x_A 186 PHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQA 246 (584)
T ss_dssp HHHCCC----------CCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHSTTHHHHHHHHHHH
T ss_pred ccccccccccccccccccccHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCcHHHHHHHHHH
Confidence 44 2111 224445688999999999998765 569999998886 466777764
No 37
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=96.81 E-value=0.019 Score=55.89 Aligned_cols=187 Identities=11% Similarity=0.085 Sum_probs=126.8
Q ss_pred ChHHHHHhhcCCCc--hHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcChHHHHHHHhhhhcCCCCChhHHHHHHH
Q 045086 104 VIPSILGLLSHDNT--DIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELLVQNIQRLSDADSDPDEMAAVYN 181 (522)
Q Consensus 104 ~v~sL~~LLsHeNt--DIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~~~lLv~nL~RldE~~~~e~e~~gV~~ 181 (522)
.++.|+.+|.|++. ++-..+...|+-|+..+. +.. ..+++.+.+..||+-|.. . ++ ....+
T Consensus 9 ~i~~lV~lL~s~~~~~~~q~~Aa~~l~~L~~~~~-----~~r----~~I~~~G~Ip~LV~lL~s---~--~~---~vq~~ 71 (233)
T 3tt9_A 9 TLERAVSMLEADHMLPSRISAAATFIQHECFQKS-----EAR----KRVNQLRGILKLLQLLKV---Q--NE---DVQRA 71 (233)
T ss_dssp CHHHHHHTCCSSCCCHHHHHHHHHHHHHHHHHCH-----HHH----HHHHHTTHHHHHHHGGGC---C--CH---HHHHH
T ss_pred cHHHHHHHhCCCCchHHHHHHHHHHHHHHHcCCc-----HHH----HHHHHcCCHHHHHHHHcC---C--CH---HHHHH
Confidence 57889999999998 876666667777765431 122 334566889999999853 2 22 24455
Q ss_pred HHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChhhhhHHHHHHHHhcCChHHHHHhhhhchHHHHHHHH-hhc
Q 045086 182 TLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNSTANQKRLGQMNGVDVLLQAV-AMY 260 (522)
Q Consensus 182 ~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ~s~~nr~~~~~~dGiD~LL~~l-a~Y 260 (522)
+.+.+-||..-+++--..++ +.+-++-|++-++......-+-.|+-.|.-|- .++.||..+.+ +||..|.+.+ .+|
T Consensus 72 Aa~aL~nLa~~~~~nk~~I~-~~GaI~~Lv~lL~~~~~~~~~e~a~~aL~nLS-~~~~~k~~i~~-~~i~~Lv~ll~~p~ 148 (233)
T 3tt9_A 72 VCGALRNLVFEDNDNKLEVA-ELNGVPRLLQVLKQTRDLETKKQITGLLWNLS-SNDKLKNLMIT-EALLTLTENIIIPF 148 (233)
T ss_dssp HHHHHHHHHTTCHHHHHHHH-HTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHH-TSGGGHHHHHH-HHHHHHCCCCCHHH
T ss_pred HHHHHHHHHhCCHHHHHHHH-HcCCHHHHHHHHccCCCHHHHHHHHHHHHHHH-cChhhHHHHHh-ccHHHHHHHHhccc
Confidence 67778888764566555555 45677777777764322223445555555553 46788888885 6899998854 344
Q ss_pred ccC---CC---CCCcHHHHHHhHHHHHHHhhC-ChhhHHHHHHhhh-HHHHHHHHhcc
Q 045086 261 KSK---DP---KTSDEEEMLENLFDSLCCVLM-PLENKERFVKAEG-VELMIIIMKQK 310 (522)
Q Consensus 261 rkr---DP---~~~eE~E~mENlFd~Lcs~L~-~~~nk~~Fl~~EG-veLM~lmlkek 310 (522)
--. || ......+..+|.-.||.++-. .+++|....+.+| |+-.+-+++..
T Consensus 149 sG~~~~~~~~~~~~~~~~v~~na~~~L~nLss~~~~~R~~~r~~~Gli~~Lv~~l~~~ 206 (233)
T 3tt9_A 149 SGWPEGDYPKANGLLDFDIFYNVTGCLRNMSSAGADGRKAMRRCDGLIDSLVHYVRGT 206 (233)
T ss_dssp HCCCGGGCCCCCTTCCHHHHHHHHHHHHHHTTSCHHHHHHHHTSTTHHHHHHHHHHHH
T ss_pred cCCcccccccccccchHHHHHHHHHHHHHHhcCCHHHHHHHHHCCCcHHHHHHHHHhh
Confidence 322 22 234567899999999999876 6799999999988 58888888864
No 38
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=96.53 E-value=0.1 Score=59.20 Aligned_cols=274 Identities=10% Similarity=0.126 Sum_probs=183.0
Q ss_pred HHHHHHhhhccccCCCChHHHHhc-CChHHHHHhhcC-CCchHHHHHHHHhhhhccc-ccccCC---------------C
Q 045086 79 LHEELEKLKVLAGGPELYPDVVNL-NVIPSILGLLSH-DNTDIAIDVVHLLQDLTDE-DVLEDN---------------D 140 (522)
Q Consensus 79 Ld~~Ik~l~~La~~P~LYp~~v~l-~~v~sL~~LLsH-eNtDIai~vi~lL~ELtD~-d~~~e~---------------~ 140 (522)
..-+|..|.-|+..|+.=..|++- |++..|+.+|.+ +++++.-.++.+|.-||.- +...+. +
T Consensus 351 ~~~AvEgLaYLSl~~~VKe~L~~d~~~L~~Lv~llk~~~d~s~~Ygal~IL~NLt~~~~~~~~e~~~l~~Lk~~A~~~~p 430 (778)
T 3opb_A 351 VEMSVEALAYLSLKASVKIMIRSNESFTEILLTMIKSQKMTHCLYGLLVIMANLSTLPEEXXXXXXXXXXXXXXXXXXXP 430 (778)
T ss_dssp HHHHHHHHHHHTTSSHHHHHHHHCHHHHHHHHHHHTTTCCTTHHHHHHHHHHHTTCCCCCCCCCCC--------------
T ss_pred HHHHHHHHHHHhCCHHHHHHHHhCHHHHHHHHHHHhCCCCchHHHHHHHHHHHhcCCCcccchhhhhhhhhhhhccccCc
Confidence 778899999999999998888854 679999999997 8999999999999999983 322110 0
Q ss_pred ------c------hHHH-HHHHHHhcChHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHHhhhccChhHHHHHhhhhchH
Q 045086 141 ------E------PARV-LVDALIENNVLELLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLL 207 (522)
Q Consensus 141 ------e------~~~~-Lv~aL~~~~~~~lLv~nL~RldE~~~~e~e~~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll 207 (522)
. .... -...+++++++..||+-+.-- .+. --..+..++-||.. +++.-..+++ ++-+
T Consensus 431 ~~~~~d~~~~~~~~v~~~~~~~l~eaGvIp~Lv~Ll~S~-----s~~---~re~A~~aL~nLS~-d~~~R~~lvq-qGal 500 (778)
T 3opb_A 431 AADKVGAEKAAKEDILLFNEKYILRTELISFLKREMHNL-----SPN---CKQQVVRIIYNITR-SKNFIPQLAQ-QGAV 500 (778)
T ss_dssp ----CCTHHHHHHHHHHHHHHHTTTTTHHHHHHHHGGGS-----CHH---HHHHHHHHHHHHHT-SGGGHHHHHH-TTHH
T ss_pred ccCcccccccchHHHHHHHHHHHHHCcCHHHHHHHHcCC-----CHH---HHHHHHHHHHHHcC-CHHHHHHHHH-CCCH
Confidence 0 1111 235677888888888766442 111 12234566667654 6777777774 5788
Q ss_pred HHHHhhccccCCC--hhhhhHHHHHHHHhcCChHHHHHhhh---hchHHHHHHHHhhcccCCCCCCc-----HHH----H
Q 045086 208 RWLLGKIKVREFD--SNKQYASEILAILLQNSTANQKRLGQ---MNGVDVLLQAVAMYKSKDPKTSD-----EEE----M 273 (522)
Q Consensus 208 ~wLL~Ri~~k~~d--~Nk~YAsEiLaILLQ~s~~nr~~~~~---~dGiD~LL~~la~YrkrDP~~~e-----E~E----~ 273 (522)
+-|+..+...... ..|..|+--|+=|+.++.+.. .|+. .++|.-|+..|.+ +|.... +.. -
T Consensus 501 ~~LL~lL~s~~~~~~~~k~~AA~ALArLlis~np~~-~f~~~~~~~aI~pLv~LL~~----~~~~~~~~l~~~~~~~~l~ 575 (778)
T 3opb_A 501 KIILEYLANKQDIGEPIRILGCRALTRMLIFTNPGL-IFKKYSALNAIPFLFELLPR----STPVDDNPLHNDEQIKLTD 575 (778)
T ss_dssp HHHHHHTTCC---CCHHHHHHHHHHHHHHHTSCHHH-HSSSSCSTTHHHHHHHTSCC----SSSCSSCC---CCCCCHHH
T ss_pred HHHHHHHhcCCCcchHHHHHHHHHHHHHHhcCCHHH-HcCCCccccchHHHHHHcCC----CCCcccccccccccccHHH
Confidence 8999999877543 368899999999997665444 4542 5889999999873 343211 111 1
Q ss_pred HHhHHHHHHHhhCChh-----hHHHHHHh-hhHHHHHHHHhc-chhhhhhhHHHHHHHhcCCcchh-hhHHhh------h
Q 045086 274 LENLFDSLCCVLMPLE-----NKERFVKA-EGVELMIIIMKQ-KKSAYASAIRALDFAMTKYPPAC-ERFVDV------L 339 (522)
Q Consensus 274 mENlFd~Lcs~L~~~~-----nk~~Fl~~-EGveLM~lmlke-kk~sr~~AlKvLD~Al~~~~~~C-~~fVe~------~ 339 (522)
.-+..-||+.+...|+ .|.+.++. .|+....-+|.+ ..+-+..|..++-.-+. ++... .+|.+. .
T Consensus 576 ~feAL~ALTNLAs~~~n~~E~~r~~Ii~~~ga~~~L~~LL~s~n~~VrrAA~elI~NL~~-~~e~i~~k~~~~~~~~~~~ 654 (778)
T 3opb_A 576 NYEALLALTNLASSETSDGEEVCKHIVSTKVYWSTIENLMLDENVPLQRSTLELISNMMS-HPLTIAAKFFNLENPQSLR 654 (778)
T ss_dssp HHHHHHHHHHHHHCCSHHHHHHHHHHHHSHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHT-SGGGTGGGTSCCSSHHHHH
T ss_pred HHHHHHHHHHHhcCCcccchHHHHHHHHhcCHHHHHHHHHhCCCHHHHHHHHHHHHHHhC-CcHHHHHHHHhhcCchhhc
Confidence 3355566777777763 37777874 678877666664 45778889888877665 44443 466532 2
Q ss_pred chhhHHHhhhcCCCCcccccchhhhHHHHHHHHHHHHHHhc
Q 045086 340 GLKTAFAAFMGKIPVNKKNKKERYQEELEERLVSLIASLFG 380 (522)
Q Consensus 340 GLktlF~~FM~k~~~~k~~kk~~~~~e~eEhvisIiaSLlr 380 (522)
||+.|-.+..- .+.+.-.++.++++.+..
T Consensus 655 rL~lLV~Ll~s------------~D~~~r~AAagALAnLts 683 (778)
T 3opb_A 655 NFNILVKLLQL------------SDVESQRAVAAIFANIAT 683 (778)
T ss_dssp HHHHHHHGGGC------------SCHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHcC------------CCHHHHHHHHHHHHHhcC
Confidence 46677666631 234566778888887754
No 39
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=96.26 E-value=0.038 Score=53.80 Aligned_cols=161 Identities=20% Similarity=0.175 Sum_probs=107.6
Q ss_pred HHHHhhhcccc-CCCChHHHHhcCChHHHHHhhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcChHHHH
Q 045086 81 EELEKLKVLAG-GPELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELL 159 (522)
Q Consensus 81 ~~Ik~l~~La~-~P~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~~~lL 159 (522)
.+...+..|+. .|+-=...++.|+++.|+.||.++|.++-..++..|.-|+-.+ ++.. .++++++.+..|
T Consensus 29 ~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s~~~~vq~~Aa~aL~nLa~~~-----~~nk----~~I~~~GaI~~L 99 (233)
T 3tt9_A 29 AAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQNEDVQRAVCGALRNLVFED-----NDNK----LEVAELNGVPRL 99 (233)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTC-----HHHH----HHHHHTTHHHHH
T ss_pred HHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCC-----HHHH----HHHHHcCCHHHH
Confidence 34566777774 4555666789999999999999999999999999999998532 1222 455667999999
Q ss_pred HHHhhhhcCCCCChhHHHHHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhcccc--C------------CChh-hh
Q 045086 160 VQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVR--E------------FDSN-KQ 224 (522)
Q Consensus 160 v~nL~RldE~~~~e~e~~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k--~------------~d~N-k~ 224 (522)
|+-|.+-. +.+ ...++.+.+=||.. .++.-..++. . -++-|.+.+-.. . .|.. +.
T Consensus 100 v~lL~~~~----~~~---~~e~a~~aL~nLS~-~~~~k~~i~~-~-~i~~Lv~ll~~p~sG~~~~~~~~~~~~~~~~v~~ 169 (233)
T 3tt9_A 100 LQVLKQTR----DLE---TKKQITGLLWNLSS-NDKLKNLMIT-E-ALLTLTENIIIPFSGWPEGDYPKANGLLDFDIFY 169 (233)
T ss_dssp HHHHHHCC----CHH---HHHHHHHHHHHHHT-SGGGHHHHHH-H-HHHHHCCCCCHHHHCCCGGGCCCCCTTCCHHHHH
T ss_pred HHHHccCC----CHH---HHHHHHHHHHHHHc-ChhhHHHHHh-c-cHHHHHHHHhccccCCcccccccccccchHHHHH
Confidence 99987521 111 12233344444433 3333344443 2 255566655311 1 1222 45
Q ss_pred hHHHHHHHHhcCChHHHHHhhhhch-HHHHHHHHhhc
Q 045086 225 YASEILAILLQNSTANQKRLGQMNG-VDVLLQAVAMY 260 (522)
Q Consensus 225 YAsEiLaILLQ~s~~nr~~~~~~dG-iD~LL~~la~Y 260 (522)
+|+-+|.-|--.++++|+.+++.+| ||.|..++..-
T Consensus 170 na~~~L~nLss~~~~~R~~~r~~~Gli~~Lv~~l~~~ 206 (233)
T 3tt9_A 170 NVTGCLRNMSSAGADGRKAMRRCDGLIDSLVHYVRGT 206 (233)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHTSTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHCCCcHHHHHHHHHhh
Confidence 7889999998888899999998876 89999987654
No 40
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=96.14 E-value=0.15 Score=56.63 Aligned_cols=222 Identities=16% Similarity=0.202 Sum_probs=142.5
Q ss_pred HHhhhccc-cCCCChHH-HH-hcCChHHHHHhhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcChHHHH
Q 045086 83 LEKLKVLA-GGPELYPD-VV-NLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELL 159 (522)
Q Consensus 83 Ik~l~~La-~~P~LYp~-~v-~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~~~lL 159 (522)
++-|.+|. ..|+-+-+ +. .-++++.|+++|+.++--|-..++-+|.+||-... ....+|.. .+.++.|
T Consensus 143 lqlL~~L~~~r~~~~Q~~Il~~p~gi~~Lv~lL~d~rE~iRneallLL~~Lt~~n~------~iQklVAF---EnaFe~L 213 (651)
T 3grl_A 143 VKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRSNG------AIQKIVAF---ENAFERL 213 (651)
T ss_dssp HHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGGCSSHHHHHHHHHHHHHHHTTCH------HHHHHHHH---TTHHHHH
T ss_pred HHHHHHHHhcCcHHHHHHHHhCcccHHHHHHHHhCchHHHHHHHHHHHHHHhcCCH------HHHHHHHH---hccHHHH
Confidence 44444443 44664333 33 33999999999999998999999999999998652 23333332 3667777
Q ss_pred HHHhhhhcCCCCChhHHHHHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCC--------ChhhhhHHHHHH
Q 045086 160 VQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREF--------DSNKQYASEILA 231 (522)
Q Consensus 160 v~nL~RldE~~~~e~e~~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~--------d~Nk~YAsEiLa 231 (522)
++-+.. |. .-+-.--|..||.++.||+..+|+.-.-+. +++.++-|..-++.++- ..|-.-+-+|+.
T Consensus 214 f~Ii~~--Eg--~~~Ggivv~DCL~ll~nLLr~N~sNQ~~Fr-Et~~i~~L~~LL~~~~~~~~W~~Qk~~N~~~~L~iIr 288 (651)
T 3grl_A 214 LDIITE--EG--NSDGGIVVEDCLILLQNLLKNNNSNQNFFK-EGSYIQRMKPWFEVGDENSGWSAQKVTNLHLMLQLVR 288 (651)
T ss_dssp HHHHHH--HT--GGGSHHHHHHHHHHHHHHHTTCHHHHHHHH-HTTCGGGGGGGGCCCSCSSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHh--cC--CCccchhHHHHHHHHHHHHhcCHHHHHHHH-HcCCHHHHHHHhCCCccccccHHHHHHHHHHHHHHHH
Confidence 665431 11 112345678899999999999887766554 66777766655554431 246666778888
Q ss_pred HHhcC------ChHHHHHhhhhchHHHHHHHHhhcccCCCCCCcHHHHHHhHHHHHHHhh-CChhhHHHHHHhh------
Q 045086 232 ILLQN------STANQKRLGQMNGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVL-MPLENKERFVKAE------ 298 (522)
Q Consensus 232 ILLQ~------s~~nr~~~~~~dGiD~LL~~la~YrkrDP~~~eE~E~mENlFd~Lcs~L-~~~~nk~~Fl~~E------ 298 (522)
.|+-. +..|+..+.+.+|+..|++.+.. |.-. .......-.+++.+. ..+.+++.|.+..
T Consensus 289 lLv~~~~~~~~t~~nQ~~~~~~g~l~~Ll~ll~~-----~~~p--~~i~~~Al~tla~~irgN~~~Q~~fa~~~vp~~~~ 361 (651)
T 3grl_A 289 VLVSPNNPPGATSSCQKAMFQCGLLQQLCTILMA-----TGVP--ADILTETINTVSEVIRGCQVNQDYFASVNAPSNPP 361 (651)
T ss_dssp HHTCTTSCHHHHHHHHHHHHHTTHHHHHHHHHTC-----SSCC--HHHHHHHHHHHHHHHTTCHHHHHHHHHCEESSSSC
T ss_pred HHhCCCCCCCCCHHHHHHHHHCCCHHHHHHHHcc-----CCCC--HHHHHHHHHHHHHHHhCCHHHHHHHhhccCCCCCC
Confidence 88775 56788999999999999997653 1111 233344556666666 4788999998754
Q ss_pred ---hHHHHHHHHhcch--hhhhhhHHHHHHHh
Q 045086 299 ---GVELMIIIMKQKK--SAYASAIRALDFAM 325 (522)
Q Consensus 299 ---GveLM~lmlkekk--~sr~~AlKvLD~Al 325 (522)
=++|.+.|+.++. -.|-.|.-+|.--+
T Consensus 362 ~p~li~lL~~~~~~~~~~~lR~Aa~~cl~ay~ 393 (651)
T 3grl_A 362 RPAIVVLLMSMVNERQPFVLRCAVLYCFQCFL 393 (651)
T ss_dssp EEHHHHHHHHHTCTTSCHHHHHHHHHHHHHHH
T ss_pred cChHHHHHHHHhcccccHHHHHHHHHHHHHHH
Confidence 2444344554443 22444554444433
No 41
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=95.62 E-value=0.13 Score=56.50 Aligned_cols=194 Identities=15% Similarity=0.152 Sum_probs=129.2
Q ss_pred HHHHHHhhhccccCCCChHHHHhcCChHHHH-HhhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcChHH
Q 045086 79 LHEELEKLKVLAGGPELYPDVVNLNVIPSIL-GLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLE 157 (522)
Q Consensus 79 Ld~~Ik~l~~La~~P~LYp~~v~l~~v~sL~-~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~~~ 157 (522)
=..+...++.|+..|..=..+++.|+|..++ .+|+++|.+|..++...|+-|.-.+ ...+.+.|+..+++.
T Consensus 51 r~~A~~al~~l~~~~~~~~l~~~~~~v~~ll~~lL~D~~~~Vr~~A~gaLrnL~~~~--------g~d~~~~l~~~~il~ 122 (684)
T 4gmo_A 51 RTTAAGAIANIVQDAKCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVLAQEE--------EADFCVHLYRLDVLT 122 (684)
T ss_dssp HHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHS--------CHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHHHHcCcHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhc--------CchHHHHHHHcChHH
Confidence 3458889999999999999999999998865 5899999999999999999887442 123557777888887
Q ss_pred HHHHHhhhhcCC----C-----CChhHHHHHH----HHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccC-CCh-h
Q 045086 158 LLVQNIQRLSDA----D-----SDPDEMAAVY----NTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVRE-FDS-N 222 (522)
Q Consensus 158 lLv~nL~RldE~----~-----~~e~e~~gV~----~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~-~d~-N 222 (522)
.|...|....+. . ..+..+.-++ ++++++-+|++........+.. .+.++-|+..+.... +.. -
T Consensus 123 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lL~~L~e~s~~~~~~v~~-~~~l~~l~~~L~~~~~~~~~v 201 (684)
T 4gmo_A 123 AIEHAAKAVLETLTTSEPPFSKLLKAQQRLVWDITGSLLVLIGLLALARDEIHEAVAT-KQTILRLLFRLISADIAPQDI 201 (684)
T ss_dssp HHHHHHHHHHHHHHCBTTBGGGSCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHT-CHHHHHHHHHHHHHCCSCHHH
T ss_pred HHHHHHHhhHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHh-cccHHHHHHHHHhcCCCcHHH
Confidence 777766554331 0 0223333333 4677888888877776666664 356666666664433 333 3
Q ss_pred hhhHHHHHHHHhcCChHHHHHhhhhchHHHHHHHHhhc-ccCCCCCCcHHHHHHhHHHHHH
Q 045086 223 KQYASEILAILLQNSTANQKRLGQMNGVDVLLQAVAMY-KSKDPKTSDEEEMLENLFDSLC 282 (522)
Q Consensus 223 k~YAsEiLaILLQ~s~~nr~~~~~~dGiD~LL~~la~Y-rkrDP~~~eE~E~mENlFd~Lc 282 (522)
...|.+.|..|..++++....+.. +|.-.+++.+... +..||....=.-.+.|+|.++.
T Consensus 202 ~~~a~~~L~~ls~dn~~~~~~i~~-~~~~~~~~~ll~~~~~~~~~~~la~giL~Ni~~~~~ 261 (684)
T 4gmo_A 202 YEEAISCLTTLSEDNLKVGQAITD-DQETHVYDVLLKLATGTDPRAVMACGVLHNVFTSLQ 261 (684)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHT-CCSSCHHHHHHHHHHSSCTTHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhccCHHHHHHHHh-cchHHHHHHHHHHhcCCcHHHHHHHHHHHhHhhhhh
Confidence 567889999999988887777765 4432333333333 2344443334455778876643
No 42
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=94.52 E-value=1.5 Score=45.35 Aligned_cols=191 Identities=13% Similarity=0.163 Sum_probs=121.4
Q ss_pred hHHHHHhhccccCCChhhhhH-HHHHHHHhcCC-hHHHHHhhhhchHHHHHHHHhhcccCCCCC--CcHHHHHHhHHHHH
Q 045086 206 LLRWLLGKIKVREFDSNKQYA-SEILAILLQNS-TANQKRLGQMNGVDVLLQAVAMYKSKDPKT--SDEEEMLENLFDSL 281 (522)
Q Consensus 206 ll~wLL~Ri~~k~~d~Nk~YA-sEiLaILLQ~s-~~nr~~~~~~dGiD~LL~~la~YrkrDP~~--~eE~E~mENlFd~L 281 (522)
=-.|..++++.. ...+++++ -+=|.+-|-++ ......|+ .+|+..|+.+++.+-.+-... ..+.+.-..+.-||
T Consensus 67 sP~~yi~~L~~~-~~~~kl~~~L~sL~v~Lrt~~~sWV~~F~-~~Gl~~Ll~iL~~~~~~~~~~~~~~d~~~q~~~l~CL 144 (383)
T 3eg5_B 67 SAMMYIQELRSG-LRDMHLLSCLESLRVSLTSHPVSWVQTFG-AEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCL 144 (383)
T ss_dssp CHHHHHHHHTTT-CCHHHHHHHHHHHHHHHHHSCHHHHHHHH-HHHHHHHHHHHHHHHTCC-------CHHHHHHHHHHH
T ss_pred CHHHHHHHHHhc-ccchhHHHHHHHHHHHHhhCccHHHHHHH-HccHHHHHHHHHHHhhccccccchhhHHHHHHHHHHH
Confidence 356666777644 44556553 23366666655 35567887 899999999998775444432 34456667788999
Q ss_pred HHhhCChhhHHHHHHhh-hHHHHHHHHhcc-hhhhhhhHHHHHHHhcCC-cch-hhhHHhhh------chhhHHHhhhcC
Q 045086 282 CCVLMPLENKERFVKAE-GVELMIIIMKQK-KSAYASAIRALDFAMTKY-PPA-CERFVDVL------GLKTAFAAFMGK 351 (522)
Q Consensus 282 cs~L~~~~nk~~Fl~~E-GveLM~lmlkek-k~sr~~AlKvLD~Al~~~-~~~-C~~fVe~~------GLktlF~~FM~k 351 (522)
-+++....|...++... +|......|-.+ ...+..|+++|...+.-+ +.+ +.+.++++ |=+.-|..+|.-
T Consensus 145 kalmN~~~G~~~vl~~~~~i~~l~~~L~s~~~~~~~~aleLL~~lc~~~~~~gG~~~VL~Al~~~~~~~e~~RF~~lv~~ 224 (383)
T 3eg5_B 145 KAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDG 224 (383)
T ss_dssp HHHTSSHHHHHHHHTCSSHHHHHHHTCCTTSHHHHHHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHHHHTSCTTHHHHHT
T ss_pred HHHhcchhhHHHHHcChHHHHHHHHHhCCCchHHHHHHHHHHHHHHhCcCcCCcHHHHHHHHHHHHHhCCCCcHHHHHHH
Confidence 99998888887766654 556555555443 467888999998755432 345 77777664 222335444432
Q ss_pred CCCcccccchhhhHHHHHHHHHHHHHHhccCCCcchHHHHHHHhhhhhhHHHHH
Q 045086 352 IPVNKKNKKERYQEELEERLVSLIASLFGGILRGSRRERLLSKFIENECEKIDR 405 (522)
Q Consensus 352 ~~~~k~~kk~~~~~e~eEhvisIiaSLlr~l~~~s~r~RlLaKFvE~d~EKvdR 405 (522)
... ...-+.--..+..|.+++...+.-..|..+-+.|..-...++=.
T Consensus 225 L~~-------~~~~e~~~~~m~lIN~li~~~~dl~~R~~lR~ef~~~Gl~~il~ 271 (383)
T 3eg5_B 225 LKS-------GTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQVLQ 271 (383)
T ss_dssp TST-------TSCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHTTHHHHHH
T ss_pred HHc-------cCcHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCChHHHHH
Confidence 210 12346666788999999998653223999999998877665433
No 43
>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B
Probab=94.41 E-value=3.3 Score=42.89 Aligned_cols=187 Identities=14% Similarity=0.173 Sum_probs=117.0
Q ss_pred HHHHHhhccccCCChhhhh-HHHHHHHHhcCCh-HHHHHhhhhchHHHHHHHHhhcccCCCCC--CcHHHHHHhHHHHHH
Q 045086 207 LRWLLGKIKVREFDSNKQY-ASEILAILLQNST-ANQKRLGQMNGVDVLLQAVAMYKSKDPKT--SDEEEMLENLFDSLC 282 (522)
Q Consensus 207 l~wLL~Ri~~k~~d~Nk~Y-AsEiLaILLQ~s~-~nr~~~~~~dGiD~LL~~la~YrkrDP~~--~eE~E~mENlFd~Lc 282 (522)
-.|..++++... ...+.. .-+=|.+-|-+++ .....|+ .+|++.|+.+|+....+.+.+ ..+......+.-||-
T Consensus 6 P~~yv~~L~~~~-~~~~~~~~L~~L~v~Lrt~~~~Wv~~F~-~~Gl~~Ll~~L~~~~~~~~~~~~~~d~~~~~~~l~CLk 83 (386)
T 2bnx_A 6 AMMYIQELRSGL-RDMHLLSCLESLRVSLNNNPVSWVQTFG-AEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLK 83 (386)
T ss_dssp HHHHHHHHTSCC-CHHHHHHHHHHHHHHHHHSCHHHHHHHH-HHHHHHHHHHHHHHHTCCTTTCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcc-chHHHHHHHHHHhHHHhcCCcHHHHHHH-HhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHH
Confidence 356677776543 222221 1123666666543 5556776 799999999998775544332 346677788999999
Q ss_pred HhhCChhhHHHHHHhh-hHHHHHHHHhcc-hhhhhhhHHHHHHHhcCCc-ch-hhhHHhhhch------hhHHHhhhcCC
Q 045086 283 CVLMPLENKERFVKAE-GVELMIIIMKQK-KSAYASAIRALDFAMTKYP-PA-CERFVDVLGL------KTAFAAFMGKI 352 (522)
Q Consensus 283 s~L~~~~nk~~Fl~~E-GveLM~lmlkek-k~sr~~AlKvLD~Al~~~~-~~-C~~fVe~~GL------ktlF~~FM~k~ 352 (522)
+++..+.|-..++... +|.++...+-.+ ...+..|+++|...+.-+. .. ..+.++++-= ++-|..+|.-.
T Consensus 84 almN~~~Gl~~vl~~~~~i~~l~~sL~s~~~~~r~~vleLL~alc~~~~~~G~~~~VL~Al~~~~~~~e~~RF~~lv~~l 163 (386)
T 2bnx_A 84 AFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGL 163 (386)
T ss_dssp HHTSSHHHHHHHHHSSSHHHHHHHTCCTTSHHHHHHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHHHHTSCTTHHHHHHT
T ss_pred HHhCCHHHHHHHHcCcHHHHHHHHHhCCCCchHHHHHHHHHHHHHcCCCCCChHHHHHHHHHHHHHhCchhhHHHHHHHH
Confidence 9999999988887765 555555555433 3567788999887444322 23 5666655432 11232233211
Q ss_pred CCcccccchhhhHHHHHHHHHHHHHHhccCCCcch-HHHHHHHhhhhhhHHH
Q 045086 353 PVNKKNKKERYQEELEERLVSLIASLFGGILRGSR-RERLLSKFIENECEKI 403 (522)
Q Consensus 353 ~~~k~~kk~~~~~e~eEhvisIiaSLlr~l~~~s~-r~RlLaKFvE~d~EKv 403 (522)
+....-+.--..+..|.+++.+.+ +-. |..+-+.|..-...++
T Consensus 164 -------~~~~~~e~~~a~m~lIN~lv~~~~-dl~~R~~LR~Ef~~~GL~~i 207 (386)
T 2bnx_A 164 -------KSGTSIALKVGCLQLINALITPAE-ELDFRVHIRSELMRLGLHQV 207 (386)
T ss_dssp -------STTSCHHHHHHHHHHHHHHHTTCS-CHHHHHHHHHHHHHTTHHHH
T ss_pred -------HcCChHHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHHHHCChHHH
Confidence 001234566778899999999875 444 9999999988766665
No 44
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}
Probab=94.32 E-value=0.97 Score=43.37 Aligned_cols=187 Identities=13% Similarity=0.165 Sum_probs=115.7
Q ss_pred HHHHhhccccCCChhhhhHHHH--HHHHhcCC-hHHHHHhhhhchHHHHHHHHhhcccCCCCC--CcHHHHHHhHHHHHH
Q 045086 208 RWLLGKIKVREFDSNKQYASEI--LAILLQNS-TANQKRLGQMNGVDVLLQAVAMYKSKDPKT--SDEEEMLENLFDSLC 282 (522)
Q Consensus 208 ~wLL~Ri~~k~~d~Nk~YAsEi--LaILLQ~s-~~nr~~~~~~dGiD~LL~~la~YrkrDP~~--~eE~E~mENlFd~Lc 282 (522)
.|..++++... +..+. ...+ |.+-|-++ ......| ..+|++.|+.++.....+.+.+ ..+......+.-||-
T Consensus 3 ~~yi~~L~~~~-~~~~~-~~~L~~L~v~Lrt~~~~Wv~~F-~~~Gl~~L~~~L~~~~~~~~~~~~~~~~~~~~~~l~CLk 79 (233)
T 2f31_A 3 MMYIQELRSGL-RDMHL-LSCLESLRVSLNNNPVSWVQTF-GAEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLK 79 (233)
T ss_dssp HHHHHHHTTTC-CHHHH-HHHHHHHHHHHHHSCHHHHHHH-HHHHHHHHHHHHHHHHTCC-----CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcc-chHHH-HHHHHHHhHhHhcCCcHHHHHH-HHhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHH
Confidence 35666665432 22222 2222 56666544 3555677 4899999999998775443332 346777788999999
Q ss_pred HhhCChhhHHHHHHhh-hHHHHHHHHhcc-hhhhhhhHHHHHHHhcCC-cch-hhhHHhhhc------hhhHHHhhhcCC
Q 045086 283 CVLMPLENKERFVKAE-GVELMIIIMKQK-KSAYASAIRALDFAMTKY-PPA-CERFVDVLG------LKTAFAAFMGKI 352 (522)
Q Consensus 283 s~L~~~~nk~~Fl~~E-GveLM~lmlkek-k~sr~~AlKvLD~Al~~~-~~~-C~~fVe~~G------LktlF~~FM~k~ 352 (522)
+++..+.|-..++... ++......+-.+ ...|..|+++|.....-+ +.. ..+..+++- =+.-|..+|.-.
T Consensus 80 almn~~~G~~~vl~~~~~i~~l~~~L~s~~~~~r~~~leLL~~lc~~~~~~G~~~~VL~Al~~~~~~~e~~RF~~lv~~l 159 (233)
T 2f31_A 80 AFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGL 159 (233)
T ss_dssp HHTSSHHHHHHHHTSSSHHHHHHTTCCTTSHHHHHHHHHHHHHHHTCSSSSCHHHHHHHHHHHHHHHHTSCTTHHHHHTT
T ss_pred HHhCChHHHHHHHcCcHHHHHHHHHhCCCCchHHHHHHHHHHHHHhCCCCCChHHHHHHHHHHHHHhCCcchHHHHHHHH
Confidence 9999999988888765 455444444333 467888899998744322 224 555555532 233444444321
Q ss_pred CCcccccchhhhHHHHHHHHHHHHHHhccCCCcch-HHHHHHHhhhhhhHHHHH
Q 045086 353 PVNKKNKKERYQEELEERLVSLIASLFGGILRGSR-RERLLSKFIENECEKIDR 405 (522)
Q Consensus 353 ~~~k~~kk~~~~~e~eEhvisIiaSLlr~l~~~s~-r~RlLaKFvE~d~EKvdR 405 (522)
. ....-+.--..+..|.+++.+.+ +-. |..+-+.|..-...++=.
T Consensus 160 ~-------~~~~~e~~~~~m~lIN~li~~~~-dl~~R~~lR~ef~~~Gl~~il~ 205 (233)
T 2f31_A 160 K-------SGTSIALKVGCLQLINALITPAE-ELDFRVHIRSELMRLGLHQVLQ 205 (233)
T ss_dssp S-------TTSCHHHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHTTHHHHHH
T ss_pred h-------cCChHHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHHHHCChHHHHH
Confidence 1 01234566678899999999864 444 999999998876665543
No 45
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=91.90 E-value=3.6 Score=42.43 Aligned_cols=160 Identities=11% Similarity=0.150 Sum_probs=111.5
Q ss_pred HHHHhcCChHHHHHhhhhchHHHHHHHHhhcccCCCCCCcHHHHHHhHHHHHHHhhCChhhHHHHH-HhhhHHHHHHHHh
Q 045086 230 LAILLQNSTANQKRLGQMNGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVLMPLENKERFV-KAEGVELMIIIMK 308 (522)
Q Consensus 230 LaILLQ~s~~nr~~~~~~dGiD~LL~~la~YrkrDP~~~eE~E~mENlFd~Lcs~L~~~~nk~~Fl-~~EGveLM~lmlk 308 (522)
|+-++|....--.-|.+.||+..|+.++..- ..++..-+.-||-.++....+-.-.+ ..+.|+-...++-
T Consensus 142 Lk~~~q~D~~Fa~EFI~~~GL~~Li~vi~~~---------~gN~q~Y~L~AL~~LM~~v~Gm~gvvs~~~fI~~lyslv~ 212 (339)
T 3dad_A 142 LKQIFQEDKDLVPEFVHSEGLSCLIRVGAAA---------DHNYQSYILRALGQLMLFVDGMLGVVAHSDTIQWLYTLCA 212 (339)
T ss_dssp HHHHHHTCTTHHHHHHHTTHHHHHHHHHTTS---------CHHHHHHHHHHHHHHTTSHHHHHHHHHCHHHHHHHHHGGG
T ss_pred HHHHhhcchHHHHHHHHhccHHHHHHHHHhc---------ChHHHHHHHHHHHHHHhccccccchhCCHHHHHHHHHHHc
Confidence 4444555555555678899999999999632 56778888888888888888876665 6677777777776
Q ss_pred cc-hhhhhhhHHHHHHHhcCCcchhhhHHhhhc----------hhhHHHhhhcCCCCcccccchhhhHHHHHHHHHHHHH
Q 045086 309 QK-KSAYASAIRALDFAMTKYPPACERFVDVLG----------LKTAFAAFMGKIPVNKKNKKERYQEELEERLVSLIAS 377 (522)
Q Consensus 309 ek-k~sr~~AlKvLD~Al~~~~~~C~~fVe~~G----------LktlF~~FM~k~~~~k~~kk~~~~~e~eEhvisIiaS 377 (522)
.+ +....+||++|=-....+..+|..++++-. +.+|..++-.| ...+.+.--+.++.|.+
T Consensus 213 s~~~~V~k~AL~LL~v~V~~se~~~~lv~~av~~v~~~~~~~p~~~Lv~~L~~~---------~~~D~elq~~amtLIN~ 283 (339)
T 3dad_A 213 SLSRLVVKTALKLLLVFVEYSENNAPLFIRAVNSVASTTGAPPWANLVSILEEK---------NGADPELLVYTVTLINK 283 (339)
T ss_dssp CSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCCCTTHHHHHHHTTT---------TSCCHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHccCcccchHHHHHHHHhhhccCCCcHHHHHHHHhcc---------CCCCHHHHHHHHHHHHH
Confidence 54 456677899886665556668888777766 55555555322 12456777899999999
Q ss_pred HhccCCCcchHHHHHHHhhhhhhHH-HHHHH
Q 045086 378 LFGGILRGSRRERLLSKFIENECEK-IDRLM 407 (522)
Q Consensus 378 Llr~l~~~s~r~RlLaKFvE~d~EK-vdRL~ 407 (522)
+|..+|....|.-+...+-+...++ +.|.+
T Consensus 284 lL~~apd~d~~~di~d~Le~~gi~~~i~r~l 314 (339)
T 3dad_A 284 TLAALPDQDSFYDVTDALEQQGMEALVQRHL 314 (339)
T ss_dssp HHHHCSSHHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred HHhcCCChhHHHHHHHHHHHccHHHHHHHHH
Confidence 9999873333666777777777654 44433
No 46
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=82.48 E-value=58 Score=35.73 Aligned_cols=193 Identities=15% Similarity=0.176 Sum_probs=98.7
Q ss_pred ChHHHHHhhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcChHHHHHHHh-hhhcCCCCChhHHHHHHHH
Q 045086 104 VIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELLVQNI-QRLSDADSDPDEMAAVYNT 182 (522)
Q Consensus 104 ~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~~~lLv~nL-~RldE~~~~e~e~~gV~~~ 182 (522)
.++.|+.+|.|++..+...++..|..+.... ...... .+..++..| ..+++. +++-+.++..+
T Consensus 175 il~~l~~~l~~~~~~vR~~A~~aL~~~~~~~-----~~~~~~---------~~~~~l~~l~~~~~d~--~~~vr~~a~~~ 238 (852)
T 4fdd_A 175 MIPKFLQFFKHSSPKIRSHAVACVNQFIISR-----TQALML---------HIDSFIENLFALAGDE--EPEVRKNVCRA 238 (852)
T ss_dssp HHHHHTTTTTCSSHHHHHHHHHHHHTTTTTT-----CHHHHT---------SHHHHHHHHHHHHTCC--CHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHhcc-----cHHHHH---------HHHHHHHHHHHHcCCC--CHHHHHHHHHH
Confidence 3556677788888888888888887766431 111111 111222222 234444 66677777776
Q ss_pred HHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChhhhhHHHHHHHHhcCChHHHHHhhhhchHHHHHHHHhhcc-
Q 045086 183 LATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNSTANQKRLGQMNGVDVLLQAVAMYK- 261 (522)
Q Consensus 183 L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ~s~~nr~~~~~~dGiD~LL~~la~Yr- 261 (522)
|+ ++++..|....... ..+++++++.++.. -+.-+..|.|.+.-+.... ..+..+. ..+..++..+-..-
T Consensus 239 L~---~l~~~~~~~~~~~l--~~l~~~l~~~~~~~-~~~vr~~a~e~l~~l~~~~-~~~~~~~--~~~~~l~p~ll~~l~ 309 (852)
T 4fdd_A 239 LV---MLLEVRMDRLLPHM--HNIVEYMLQRTQDQ-DENVALEACEFWLTLAEQP-ICKDVLV--RHLPKLIPVLVNGMK 309 (852)
T ss_dssp HH---HHHHHCHHHHGGGH--HHHHHHHHHHHTCS-SHHHHHHHHHHHHHHTTST-THHHHHT--TTHHHHHHHHHHHTS
T ss_pred HH---HHHHhCHHHHHHHH--HHHHHHHHHHccCC-cHHHHHHHHHHHHHHhcch-hHHHHHH--HHHHHHHHHHHHHcC
Confidence 65 55666665433222 24889999887753 2445888899988876543 2222222 33444444332222
Q ss_pred ---------cCCCCCC-cH---------HHHHHhHHHHHHHhhCChhhHHHHHHhhhHHHHHHHHhcch-hhhhhhHHHH
Q 045086 262 ---------SKDPKTS-DE---------EEMLENLFDSLCCVLMPLENKERFVKAEGVELMIIIMKQKK-SAYASAIRAL 321 (522)
Q Consensus 262 ---------krDP~~~-eE---------~E~mENlFd~Lcs~L~~~~nk~~Fl~~EGveLM~lmlkekk-~sr~~AlKvL 321 (522)
+.||... ++ .......++.|+..+- . . +-..-+.++.-+++... ..|..|+.+|
T Consensus 310 ~~e~d~~~~~~d~~ed~~~dd~~~~~~vr~~a~~~L~~la~~~~----~-~-~~~~l~~~l~~~l~~~~~~~R~aa~~al 383 (852)
T 4fdd_A 310 YSDIDIILLKGDVEGGSGGDDTISDWNLRKCSAAALDVLANVYR----D-E-LLPHILPLLKELLFHHEWVVKESGILVL 383 (852)
T ss_dssp CCHHHHHHHHC------------CCCCHHHHHHHHHHHHHHHHG----G-G-GHHHHHHHHHHHHTCSSHHHHHHHHHHH
T ss_pred CcHhHHHHhcCCcccccccccccccchHHHHHHHHHHHHHHhcc----H-H-HHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 2454322 22 2234555566665442 1 1 11123444555555443 4566677666
Q ss_pred HHHhcC
Q 045086 322 DFAMTK 327 (522)
Q Consensus 322 D~Al~~ 327 (522)
-.-..+
T Consensus 384 g~i~~~ 389 (852)
T 4fdd_A 384 GAIAEG 389 (852)
T ss_dssp HHTTTT
T ss_pred HHHHhc
Confidence 554443
No 47
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=80.79 E-value=18 Score=37.29 Aligned_cols=164 Identities=15% Similarity=0.149 Sum_probs=110.4
Q ss_pred HhhHHHHHHhhhc-cccCCCChHHHHhcCChHHHHHhhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcC
Q 045086 76 EVDLHEELEKLKV-LAGGPELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENN 154 (522)
Q Consensus 76 E~dLd~~Ik~l~~-La~~P~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~ 154 (522)
.-++-.++.+|+- ++..+++=++||..+++..|+....+---.+-.=++.-|++|-+-. .+|..++. ...
T Consensus 132 ~~~lr~aLfsLk~~~q~D~~Fa~EFI~~~GL~~Li~vi~~~~gN~q~Y~L~AL~~LM~~v------~Gm~gvvs---~~~ 202 (339)
T 3dad_A 132 GPELRRSLFSLKQIFQEDKDLVPEFVHSEGLSCLIRVGAAADHNYQSYILRALGQLMLFV------DGMLGVVA---HSD 202 (339)
T ss_dssp HHHHHHHHHHHHHHHHTCTTHHHHHHHTTHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSH------HHHHHHHH---CHH
T ss_pred cHHHHHHHHHHHHHhhcchHHHHHHHHhccHHHHHHHHHhcChHHHHHHHHHHHHHHhcc------ccccchhC---CHH
Confidence 4467788999997 8899999999999999999999997766666777777777776643 35655554 223
Q ss_pred hHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHHhhhccChhHHHHHhh-------hh--chHHHHHhhccccC-CCh-hh
Q 045086 155 VLELLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCE-------RT--KLLRWLLGKIKVRE-FDS-NK 223 (522)
Q Consensus 155 ~~~lLv~nL~RldE~~~~e~e~~gV~~~L~iiENl~e~~p~~a~~~~~-------~t--~ll~wLL~Ri~~k~-~d~-Nk 223 (522)
.+.-+++-+. + .++.-+-.+|++++++++..++.+.-+.+ .+ ..++-|.+.++.+. .|. -.
T Consensus 203 fI~~lyslv~----s----~~~~V~k~AL~LL~v~V~~se~~~~lv~~av~~v~~~~~~~p~~~Lv~~L~~~~~~D~elq 274 (339)
T 3dad_A 203 TIQWLYTLCA----S----LSRLVVKTALKLLLVFVEYSENNAPLFIRAVNSVASTTGAPPWANLVSILEEKNGADPELL 274 (339)
T ss_dssp HHHHHHHGGG----C----SCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCCCTTHHHHHHHTTTTSCCHHHH
T ss_pred HHHHHHHHHc----C----ccHHHHHHHHHHHHHHHccCcccchHHHHHHHHhhhccCCCcHHHHHHHHhccCCCCHHHH
Confidence 3333333332 2 34777888999999999988754433222 11 24677888888664 343 47
Q ss_pred hhHHHHHHHHhcCCh--HHHHHhh-h--hchHHHHHHH
Q 045086 224 QYASEILAILLQNST--ANQKRLG-Q--MNGVDVLLQA 256 (522)
Q Consensus 224 ~YAsEiLaILLQ~s~--~nr~~~~-~--~dGiD~LL~~ 256 (522)
+||-=++--+|++.+ ..+..+. . .-||+..++.
T Consensus 275 ~~amtLIN~lL~~apd~d~~~di~d~Le~~gi~~~i~r 312 (339)
T 3dad_A 275 VYTVTLINKTLAALPDQDSFYDVTDALEQQGMEALVQR 312 (339)
T ss_dssp HHHHHHHHHHHHHCSSHHHHHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHhcCCChhHHHHHHHHHHHccHHHHHHH
Confidence 788888888888755 2233332 1 3477665554
No 48
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=76.08 E-value=75 Score=32.66 Aligned_cols=217 Identities=11% Similarity=0.123 Sum_probs=112.4
Q ss_pred HHHHHHHhcChHHHHHHHhhhhcCCCC---ChhHHHHHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCCh
Q 045086 145 VLVDALIENNVLELLVQNIQRLSDADS---DPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDS 221 (522)
Q Consensus 145 ~Lv~aL~~~~~~~lLv~nL~RldE~~~---~e~e~~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~ 221 (522)
..|..++ ++.+..|+..|.+++.... .+.|..--|.|+..+-.++.. ..-...+......+.||-.-+..+. ..
T Consensus 101 sWV~~F~-~~Gl~~Ll~iL~~~~~~~~~~~~~~d~~~q~~~l~CLkalmN~-~~G~~~vl~~~~~i~~l~~~L~s~~-~~ 177 (383)
T 3eg5_B 101 SWVQTFG-AEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNN-KFGIKTMLETEEGILLLVRAMDPAV-PN 177 (383)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHTCC-------CHHHHHHHHHHHHHHTSS-HHHHHHHHTCSSHHHHHHHTCCTTS-HH
T ss_pred HHHHHHH-HccHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHHHHhcc-hhhHHHHHcChHHHHHHHHHhCCCc-hH
Confidence 3466666 6788999999999975421 133455556666666666653 3333345556678888888775432 33
Q ss_pred hhhhHHHHHHHHhcCChHHHHHhhhhchHHHHHHHHhhcccC---CC--------CCCcHHHHHHhHHHHHHHhhCChhh
Q 045086 222 NKQYASEILAILLQNSTANQKRLGQMNGVDVLLQAVAMYKSK---DP--------KTSDEEEMLENLFDSLCCVLMPLEN 290 (522)
Q Consensus 222 Nk~YAsEiLaILLQ~s~~nr~~~~~~dGiD~LL~~la~Yrkr---DP--------~~~eE~E~mENlFd~Lcs~L~~~~n 290 (522)
-+..|.|||+.+.--+. ..+|-+.+|+++..|+.. .| ..+.-.||+-++..-+=+++..+++
T Consensus 178 ~~~~aleLL~~lc~~~~-------~~gG~~~VL~Al~~~~~~~e~~RF~~lv~~L~~~~~~e~~~~~m~lIN~li~~~~d 250 (383)
T 3eg5_B 178 MMIDAAKLLSALCILPQ-------PEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINALITPAEE 250 (383)
T ss_dssp HHHHHHHHHHHHHTCCS-------STTHHHHHHHHHHHHHHHHTSCTTHHHHHTTSTTSCHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHhCcC-------cCCcHHHHHHHHHHHHHhCCCCcHHHHHHHHHccCcHHHHHHHHHHHHHHHcCCCC
Confidence 45578899988766432 123567777776666431 00 1123455655444333344443333
Q ss_pred HHH------HHHhhhHHHHHHHHhcchh-hhhhhHHHHHHHhcC-CcchhhhH----HhhhchhhHHHhhhcCCCCcccc
Q 045086 291 KER------FVKAEGVELMIIIMKQKKS-AYASAIRALDFAMTK-YPPACERF----VDVLGLKTAFAAFMGKIPVNKKN 358 (522)
Q Consensus 291 k~~------Fl~~EGveLM~lmlkekk~-sr~~AlKvLD~Al~~-~~~~C~~f----Ve~~GLktlF~~FM~k~~~~k~~ 358 (522)
-+. -+..-|+.=.+--||.... .-..-+++.+..... ..+--++| |+.--...+|.+...+.+
T Consensus 251 l~~R~~lR~ef~~~Gl~~il~~lr~~~~~~L~~Qi~~fe~~~~eD~~el~~r~~~~~~d~~d~~~~~~~l~~~~~----- 325 (383)
T 3eg5_B 251 LDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRLDDIRMEMDDFGEVFQIILNTVK----- 325 (383)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHTT-----
T ss_pred HHHHHHHHHHHHHCChHHHHHHHhcCCChhHHHHHHHHHHHHHHhHHHHHhhccccCcCcCCHHHHHHHHHHHhc-----
Confidence 222 1223455544444443210 011112233222211 11111111 333344556777665421
Q ss_pred cchhhhHHHHHHHHHHHHHHhcc
Q 045086 359 KKERYQEELEERLVSLIASLFGG 381 (522)
Q Consensus 359 kk~~~~~e~eEhvisIiaSLlr~ 381 (522)
....+.|.+||+..|+.-
T Consensus 326 -----~t~a~~~flSiLQhLlli 343 (383)
T 3eg5_B 326 -----DSKAEPHFLSILQHLLLV 343 (383)
T ss_dssp -----TSTTHHHHHHHHHHTTCS
T ss_pred -----CCcchHHHHHHHHHHHhc
Confidence 123478999999999875
No 49
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=60.20 E-value=1.1e+02 Score=33.37 Aligned_cols=190 Identities=14% Similarity=0.211 Sum_probs=112.1
Q ss_pred HHHhcChHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChhhhhHHH
Q 045086 149 ALIENNVLELLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASE 228 (522)
Q Consensus 149 aL~~~~~~~lLv~nL~RldE~~~~e~e~~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsE 228 (522)
++.+.+++.+| +. |... +.+++.+.-.+| -||++ +|+.-..+. ..+.+.=++.++-...-..=+..|+.
T Consensus 30 ~~~~~~i~Pll-~~---L~S~--~~~~r~~A~~al---~~l~~-~~~~~~l~~-~~~~v~~ll~~lL~D~~~~Vr~~A~g 98 (684)
T 4gmo_A 30 KLREDKILPVL-KD---LKSP--DAKSRTTAAGAI---ANIVQ-DAKCRKLLL-REQVVHIVLTETLTDNNIDSRAAGWE 98 (684)
T ss_dssp HHHHHTTHHHH-HH---HSSS--CCSHHHHHHHHH---HHHTT-SHHHHHHHH-HTTHHHHHHHTTTTCSCHHHHHHHHH
T ss_pred ccchhhHHHHH-HH---cCCC--CHHHHHHHHHHH---HHHHc-CcHHHHHHH-HcCCHHHHHHHHcCCCCHHHHHHHHH
Confidence 34455666654 44 4555 778888865554 47776 777666555 45566667666544444445778999
Q ss_pred HHHHHhcCC-hHHHHHhhhhchHHHHHHHHhh----cccCCCC----CCcHH----HHHHhHHHHHHHhh-CChhhHHHH
Q 045086 229 ILAILLQNS-TANQKRLGQMNGVDVLLQAVAM----YKSKDPK----TSDEE----EMLENLFDSLCCVL-MPLENKERF 294 (522)
Q Consensus 229 iLaILLQ~s-~~nr~~~~~~dGiD~LL~~la~----YrkrDP~----~~eE~----E~mENlFd~Lcs~L-~~~~nk~~F 294 (522)
.|.-|-+.. ...+..+.+.|++-.|+..+.. +....|. ..... ++.+|+..+|.++- ...+..+.+
T Consensus 99 aLrnL~~~~g~d~~~~l~~~~il~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lL~~L~e~s~~~~~~v 178 (684)
T 4gmo_A 99 ILKVLAQEEEADFCVHLYRLDVLTAIEHAAKAVLETLTTSEPPFSKLLKAQQRLVWDITGSLLVLIGLLALARDEIHEAV 178 (684)
T ss_dssp HHHHHHHHSCHHHHHHHHHTTHHHHHHHHHHHHHHHHHCBTTBGGGSCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHhhcCchHHHHHHHcChHHHHHHHHHhhHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 998887754 4566666667776666655432 2222322 11122 24455555555433 244556778
Q ss_pred HHhhhHHHHHHHH-hcc---hhhhhhhHHHHHHHhcCCcchhhhHHhhhchhhHHHhhhc
Q 045086 295 VKAEGVELMIIIM-KQK---KSAYASAIRALDFAMTKYPPACERFVDVLGLKTAFAAFMG 350 (522)
Q Consensus 295 l~~EGveLM~lml-kek---k~sr~~AlKvLD~Al~~~~~~C~~fVe~~GLktlF~~FM~ 350 (522)
....|+...+..+ ..- ...+..|+.+|--...+.++..+.+++ -|..++|.+++.
T Consensus 179 ~~~~~l~~l~~~L~~~~~~~~~v~~~a~~~L~~ls~dn~~~~~~i~~-~~~~~~~~~ll~ 237 (684)
T 4gmo_A 179 ATKQTILRLLFRLISADIAPQDIYEEAISCLTTLSEDNLKVGQAITD-DQETHVYDVLLK 237 (684)
T ss_dssp HTCHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHTTCHHHHHHHHT-CCSSCHHHHHHH
T ss_pred HhcccHHHHHHHHHhcCCCcHHHHHHHHHHHHHHhccCHHHHHHHHh-cchHHHHHHHHH
Confidence 8888887555554 322 234566677764333346677777777 466677777764
No 50
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=58.61 E-value=94 Score=27.17 Aligned_cols=30 Identities=13% Similarity=0.272 Sum_probs=17.7
Q ss_pred ChHHHHHhhcCCCchHHHHHHHHhhhhccc
Q 045086 104 VIPSILGLLSHDNTDIAIDVVHLLQDLTDE 133 (522)
Q Consensus 104 ~v~sL~~LLsHeNtDIai~vi~lL~ELtD~ 133 (522)
+++.|+.+|.|+|..+...++..|..+-++
T Consensus 46 ~~~~L~~~l~~~~~~vr~~a~~~L~~~~~~ 75 (201)
T 3ltj_A 46 AVEPLIKALKDEDAWVRRAAADALGQIGDE 75 (201)
T ss_dssp GHHHHHHHTTCSSHHHHHHHHHHHHHHCCG
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhhCCH
Confidence 455556666666666666666666655443
No 51
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=49.20 E-value=2.8e+02 Score=29.84 Aligned_cols=189 Identities=17% Similarity=0.245 Sum_probs=96.1
Q ss_pred hHHHHhc-CChHHHHHhhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHH---HHHHhcC---------------hH
Q 045086 96 YPDVVNL-NVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLV---DALIENN---------------VL 156 (522)
Q Consensus 96 Yp~~v~l-~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv---~aL~~~~---------------~~ 156 (522)
+|+.+.. +.+..|..+|+..|+-+..+++.+|.|+...+... -..-...++ ..++..+ .+
T Consensus 179 ~p~~~~~~~~~~~l~~lL~d~d~~V~~~a~~~l~~i~~~~~~~-~~~~~~~~~~~L~~ll~~~~~~~~~~~~~~~~~~w~ 257 (621)
T 2vgl_A 179 SPDLVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPEE-FKTSVSLAVSRLSRIVTSASTDLQDYTYYFVPAPWL 257 (621)
T ss_dssp CGGGCCCCSCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCHHH-HTTHHHHHHHHHHHHHHCCSSSCSTTEETTEESHHH
T ss_pred ChhhcCchhHHHHHHHHhCCCCccHHHHHHHHHHHHHHhChHH-HHHHHHHHHHHHHHHHhCCCCCccchhhcCCCCchH
Confidence 4555553 78999999999999999999999999986543110 000111122 2232211 11
Q ss_pred -HHHHHHhhhhcCCCCChhHHHHHHHHHH-HHHhhhccCh----------hHHHHHhhhhchHHHHHhhccccCCChhhh
Q 045086 157 -ELLVQNIQRLSDADSDPDEMAAVYNTLA-TIENLIEVKP----------SVAELVCERTKLLRWLLGKIKVREFDSNKQ 224 (522)
Q Consensus 157 -~lLv~nL~RldE~~~~e~e~~gV~~~L~-iiENl~e~~p----------~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~ 224 (522)
-.++..|.++...+ +++.+..++.+|. ++.++.+ .| +.+.-+ +....+-.+ . ....=..
T Consensus 258 qi~il~ll~~~~~~~-d~~~~~~l~~~L~~il~~~~~-~~ks~~l~~~n~~~aVl~-ea~~~i~~l----~--~~~~~~~ 328 (621)
T 2vgl_A 258 SVKLLRLLQCYPPPE-DPAVRGRLTECLETILNKAQE-PPKSKKVQHSNAKNAVLF-EAISLIIHH----D--SEPNLLV 328 (621)
T ss_dssp HHHHHHHGGGSSSCS-SHHHHHHHHHHHHHHHHHHHS-CCSCSSHHHHHHHHHHHH-HHHHHHHHH----C--CCHHHHH
T ss_pred HHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHhhcc-CcccccccccchHHHHHH-HHHHHHHhc----C--CcHHHHH
Confidence 24556677775431 3455555666554 3333322 12 111111 111122111 1 1222233
Q ss_pred hHHHHHHHHhcCChHHHHHhhhhchHHHHHHHHhhcccCCCCCCcHHHHHHhHHHHHHHhhC-ChhhHHHHHHhhhHHHH
Q 045086 225 YASEILAILLQNSTANQKRLGQMNGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVLM-PLENKERFVKAEGVELM 303 (522)
Q Consensus 225 YAsEiLaILLQ~s~~nr~~~~~~dGiD~LL~~la~YrkrDP~~~eE~E~mENlFd~Lcs~L~-~~~nk~~Fl~~EGveLM 303 (522)
-|...|.-+|.+++.|-+-++ ++.|.+.+ .+.|. .+++......+..+|. .++ ..++...++++
T Consensus 329 ~~~~~L~~~L~~~~~niry~a----L~~l~~l~----~~~~~----~~~~~~~~~~i~~~L~~d~d---~~Ir~~aL~lL 393 (621)
T 2vgl_A 329 RACNQLGQFLQHRETNLRYLA----LESMCTLA----SSEFS----HEAVKTHIETVINALKTERD---VSVRQRAVDLL 393 (621)
T ss_dssp HHHHHHHHHSSCSCHHHHHHH----HHHHHHHT----TCTTT----HHHHHTTHHHHHHHHTTCCC---HHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCcchHHHH----HHHHHHHH----hccCc----HHHHHHHHHHHHHHhccCCC---HhHHHHHHHHH
Confidence 577788888877766664444 33333333 33342 2355555555555554 332 34666777777
Q ss_pred HHHHhc
Q 045086 304 IIIMKQ 309 (522)
Q Consensus 304 ~lmlke 309 (522)
..|..+
T Consensus 394 ~~l~~~ 399 (621)
T 2vgl_A 394 YAMCDR 399 (621)
T ss_dssp HHHCCH
T ss_pred HHHcCh
Confidence 666654
No 52
>2i9c_A Hypothetical protein RPA1889; structural genomics, SAD, PSI-2, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.00A {Rhodopseudomonas palustris} SCOP: a.118.1.25
Probab=44.17 E-value=15 Score=32.81 Aligned_cols=51 Identities=14% Similarity=0.139 Sum_probs=33.2
Q ss_pred ChHHHHhc-CChH-HHHHhhcCCCchHH-HHHHHHhhhhcccccccCCCchHHHHHHHHHhcC
Q 045086 95 LYPDVVNL-NVIP-SILGLLSHDNTDIA-IDVVHLLQDLTDEDVLEDNDEPARVLVDALIENN 154 (522)
Q Consensus 95 LYp~~v~l-~~v~-sL~~LLsHeNtDIa-i~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~ 154 (522)
+|-++... |-.. .|+.||+|||..+. -+++-+|..- ++.+......+.+..
T Consensus 47 ~~~eLk~r~Gd~R~aLl~Ll~H~n~~VRl~AA~~~L~~~---------p~~A~~vLe~ia~~~ 100 (123)
T 2i9c_A 47 IADELKARDGDQRTALLSLFEYPNMQVRLQAAKLTLAVA---------PVKAREQLEAIVSSK 100 (123)
T ss_dssp HHHHHHHSTTCGGGGGGGGGGSSCHHHHHHHHHTTTTTC---------HHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCcHHHHHHHHHhCCCccHHHHHHHHHHhhC---------hHHHHHHHHHHHhCC
Confidence 57778744 6454 89999999999997 4556666521 224555555555543
No 53
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=43.56 E-value=3.3e+02 Score=29.11 Aligned_cols=235 Identities=12% Similarity=0.161 Sum_probs=108.0
Q ss_pred HHHHHHhhhccccCC--CChHHHHhcCChHHHHHhhcCCCchHHHHHHHHhhhhccccccc-CCCchHHHHHHHHHhcCh
Q 045086 79 LHEELEKLKVLAGGP--ELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLE-DNDEPARVLVDALIENNV 155 (522)
Q Consensus 79 Ld~~Ik~l~~La~~P--~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~-e~~e~~~~Lv~aL~~~~~ 155 (522)
-.+++..+..++..+ +.+..++ -..++.|+.+|.++|..+...++..|..+...-... ........++..
T Consensus 383 r~~a~~~l~~i~~~~~~~~~~~~~-~~~l~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~l~~~l~~------ 455 (876)
T 1qgr_A 383 RDAAVMAFGCILEGPEPSQLKPLV-IQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQC------ 455 (876)
T ss_dssp HHHHHHHHHHTSSSSCHHHHHHHH-HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCGGGTSSTTTHHHHHHH------
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHH-HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCchhcccHHHHHHHHHH------
Confidence 345566777777653 3222222 236788899999999988877777777666532110 001122222222
Q ss_pred HHHHHHHhhhhcCCCCChhHHHHHHHHHH-HHHhhh---------------ccChhHHHHHhhhhchHHHHHhhccccC-
Q 045086 156 LELLVQNIQRLSDADSDPDEMAAVYNTLA-TIENLI---------------EVKPSVAELVCERTKLLRWLLGKIKVRE- 218 (522)
Q Consensus 156 ~~lLv~nL~RldE~~~~e~e~~gV~~~L~-iiENl~---------------e~~p~~a~~~~~~t~ll~wLL~Ri~~k~- 218 (522)
|+. .+++ ...=+..+-.+|+ ++++.- .+.|-+ ..+++.|++.+....
T Consensus 456 ---l~~---~l~~---~~~v~~~a~~al~~l~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~il~~L~~~l~~~~~ 519 (876)
T 1qgr_A 456 ---LIE---GLSA---EPRVASNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSF-------ELIVQKLLETTDRPDG 519 (876)
T ss_dssp ---HHH---HTTS---CHHHHHHHHHHHHHHHHHHHHTTSCTTSCCCCCCCSSTTTH-------HHHHHHHHHHTTSCSS
T ss_pred ---HHH---HHcC---CHHHHHHHHHHHHHHHHHhhhccccccccccccchhhhHhH-------HHHHHHHHHHHhCcCc
Confidence 222 2222 1111222222222 222211 022211 247888888877543
Q ss_pred -CChhhhhHHHHHHHHhcCChHHHHHhhhhchHHHHHHHHhhcccCCC--CCCcH----HHHHHhHHHHHHHhhCChh--
Q 045086 219 -FDSNKQYASEILAILLQNSTANQKRLGQMNGVDVLLQAVAMYKSKDP--KTSDE----EEMLENLFDSLCCVLMPLE-- 289 (522)
Q Consensus 219 -~d~Nk~YAsEiLaILLQ~s~~nr~~~~~~dGiD~LL~~la~YrkrDP--~~~eE----~E~mENlFd~Lcs~L~~~~-- 289 (522)
...-+..+-|.|+.|..........+- ..-+..+++.+...-.... .+.+. .+..++++.++..++..-.
T Consensus 520 ~~~~~r~~~~~~l~~l~~~~~~~~~~~~-~~l~~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~~~~~ 598 (876)
T 1qgr_A 520 HQNNLRSSAYESLMEIVKNSAKDCYPAV-QKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQHQ 598 (876)
T ss_dssp CSTTHHHHHHHHHHHHHHTCCSTTHHHH-HHHHHHHHHHHHHHHTTTTSCCSTTHHHHHHHHHHHHHHHHHHHHTTSCHH
T ss_pred chhhHHHHHHHHHHHHHHHCchhhHHHH-HHHHHHHHHHHHHHHHHHhccCChhhHHHHHHHHHHHHHHHHHHHHHhChh
Confidence 223466788999999887654221111 1234555555543311111 12222 3344566666666554322
Q ss_pred hHHHHHHhhhHHHHHHHHhcc---hhhhhhhHHHHHHHhcCCcchhhhHHhh
Q 045086 290 NKERFVKAEGVELMIIIMKQK---KSAYASAIRALDFAMTKYPPACERFVDV 338 (522)
Q Consensus 290 nk~~Fl~~EGveLM~lmlkek---k~sr~~AlKvLD~Al~~~~~~C~~fVe~ 338 (522)
.-..|+ ..=+..++.+++.. ...+..|+.++..-....+..|..+++.
T Consensus 599 ~~~~~~-~~l~~~l~~~l~~~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~ 649 (876)
T 1qgr_A 599 DALQIS-DVVMASLLRMFQSTAGSGGVQEDALMAVSTLVEVLGGEFLKYMEA 649 (876)
T ss_dssp HHHTTH-HHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHGGGGGGGHHH
T ss_pred hhhHHH-HHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 111122 11122333444433 1345666776665444333345555443
No 54
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=39.52 E-value=2e+02 Score=25.26 Aligned_cols=31 Identities=13% Similarity=0.266 Sum_probs=18.6
Q ss_pred CChHHHHHhhcCCCchHHHHHHHHhhhhccc
Q 045086 103 NVIPSILGLLSHDNTDIAIDVVHLLQDLTDE 133 (522)
Q Consensus 103 ~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~ 133 (522)
++++.|+.+|.|+|..+...++..|..+-++
T Consensus 50 ~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~~ 80 (211)
T 3ltm_A 50 RAVEPLIKALKDEDAWVRRAAADALGQIGDE 80 (211)
T ss_dssp GGHHHHHHHTTCSCHHHHHHHHHHHHHHCCG
T ss_pred cHHHHHHHHHcCCCHHHHHHHHHHHHhhCCH
Confidence 3455566666666666666666666665543
No 55
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}
Probab=39.28 E-value=1e+02 Score=29.05 Aligned_cols=106 Identities=13% Similarity=0.131 Sum_probs=69.6
Q ss_pred HHHHHHhcChHHHHHHHhhhhcCCCCC---hhHHHHHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChh
Q 045086 146 LVDALIENNVLELLVQNIQRLSDADSD---PDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSN 222 (522)
Q Consensus 146 Lv~aL~~~~~~~lLv~nL~RldE~~~~---e~e~~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~N 222 (522)
.|..+ .++.++.|++.|.++...... +.+..-.|.|+..+=.++...+.+ ..+......+.||..-+..+.. .-
T Consensus 36 Wv~~F-~~~Gl~~L~~~L~~~~~~~~~~~~~~~~~~~~~~l~CLkalmn~~~G~-~~vl~~~~~i~~l~~~L~s~~~-~~ 112 (233)
T 2f31_A 36 WVQTF-GAEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGI-KTMLETEEGILLLVRAMDPAVP-NM 112 (233)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHTCC-----CCHHHHHHHHHHHHHHHTSSHHHH-HHHHTSSSHHHHHHTTCCTTSH-HH
T ss_pred HHHHH-HHhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHhCChHHH-HHHHcCcHHHHHHHHHhCCCCc-hH
Confidence 45555 467888999999999754211 235666777777777777633334 3455566678888877754333 34
Q ss_pred hhhHHHHHHHHhcCChHHHHHhhhhch-HHHHHHHHhhccc
Q 045086 223 KQYASEILAILLQNSTANQKRLGQMNG-VDVLLQAVAMYKS 262 (522)
Q Consensus 223 k~YAsEiLaILLQ~s~~nr~~~~~~dG-iD~LL~~la~Yrk 262 (522)
|.-|.|+|+.+.--+. -+| -+.+|+++..|++
T Consensus 113 r~~~leLL~~lc~~~~--------~~G~~~~VL~Al~~~~~ 145 (233)
T 2f31_A 113 MIDAAKLLSALCILPQ--------PEDMNERVLEAMTERAE 145 (233)
T ss_dssp HHHHHHHHHHHHTCSS--------SSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCC--------CCChHHHHHHHHHHHHH
Confidence 5568899987755332 158 8888888887754
No 56
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=38.41 E-value=74 Score=27.87 Aligned_cols=33 Identities=12% Similarity=0.220 Sum_probs=22.1
Q ss_pred CChHHHHHhhcCCCchHHHHHHHHhhhhccccc
Q 045086 103 NVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDV 135 (522)
Q Consensus 103 ~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~ 135 (522)
++++.|+.+|.|+|..+...++..|..+.+++.
T Consensus 76 ~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~~~~ 108 (201)
T 3ltj_A 76 RAVEPLIKALKDEDGWVRQSAAVALGQIGDERA 108 (201)
T ss_dssp GGHHHHHHHTTCSSHHHHHHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhCcHHH
Confidence 355666667777777777777777777766654
No 57
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=37.69 E-value=2.1e+02 Score=25.06 Aligned_cols=33 Identities=15% Similarity=0.117 Sum_probs=28.7
Q ss_pred cCChHHHHHhhcCCCchHHHHHHHHhhhhcccc
Q 045086 102 LNVIPSILGLLSHDNTDIAIDVVHLLQDLTDED 134 (522)
Q Consensus 102 l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d 134 (522)
-++++.|+.+|.|+|.++-..++..|..+-+++
T Consensus 18 ~~~~~~L~~~L~~~~~~vR~~A~~~L~~~~~~~ 50 (211)
T 3ltm_A 18 PEKVEMYIKNLQDDSYYVRRAAAYALGKIGDER 50 (211)
T ss_dssp GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCCGG
T ss_pred HhHHHHHHHHHcCCCHHHHHHHHHHHHHhCCcc
Confidence 356888999999999999999999999987754
No 58
>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B
Probab=28.62 E-value=4.8e+02 Score=26.53 Aligned_cols=105 Identities=13% Similarity=0.124 Sum_probs=66.1
Q ss_pred HHHHHHhcChHHHHHHHhhhhcCCCCC---hhHHHHHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChh
Q 045086 146 LVDALIENNVLELLVQNIQRLSDADSD---PDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSN 222 (522)
Q Consensus 146 Lv~aL~~~~~~~lLv~nL~RldE~~~~---e~e~~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~N 222 (522)
.|..++ ++.+..|+..|.++...... +.+..-.|.|+..+=.++...+.+. .+......+.||..-+..+.+ .-
T Consensus 40 Wv~~F~-~~Gl~~Ll~~L~~~~~~~~~~~~~~d~~~~~~~l~CLkalmN~~~Gl~-~vl~~~~~i~~l~~sL~s~~~-~~ 116 (386)
T 2bnx_A 40 WVQTFG-AEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIK-TMLETEEGILLLVRAMDPAVP-NM 116 (386)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHTCCTTTCCTTHHHHHHHHHHHHHHHTSSHHHHH-HHHHSSSHHHHHHHTCCTTSH-HH
T ss_pred HHHHHH-HhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhCCHHHHH-HHHcCcHHHHHHHHHhCCCCc-hH
Confidence 455554 57888999999999654211 3466777778888887776444443 455556677888877754333 23
Q ss_pred hhhHHHHHHHHhcCChHHHHHhhhhch-HHHHHHHHhhcc
Q 045086 223 KQYASEILAILLQNSTANQKRLGQMNG-VDVLLQAVAMYK 261 (522)
Q Consensus 223 k~YAsEiLaILLQ~s~~nr~~~~~~dG-iD~LL~~la~Yr 261 (522)
+.-|.|+|+.+.--+.+ +| -..+|+++..|.
T Consensus 117 r~~vleLL~alc~~~~~--------~G~~~~VL~Al~~~~ 148 (386)
T 2bnx_A 117 MIDAAKLLSALCILPQP--------EDMNERVLEAMTERA 148 (386)
T ss_dssp HHHHHHHHHHHHTCCSS--------TTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCC--------CChHHHHHHHHHHHH
Confidence 44588998887654431 25 566666655553
No 59
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=27.53 E-value=3.6e+02 Score=24.67 Aligned_cols=31 Identities=6% Similarity=0.075 Sum_probs=20.9
Q ss_pred ChHHHHHhhcCCCchHHHHHHHHhhhhcccc
Q 045086 104 VIPSILGLLSHDNTDIAIDVVHLLQDLTDED 134 (522)
Q Consensus 104 ~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d 134 (522)
.++.|+.+|.|+|..+...++..|..+.+++
T Consensus 129 ~~~~L~~~l~d~~~~vR~~a~~aL~~~~~~~ 159 (280)
T 1oyz_A 129 IVEQSQITAFDKSTNVRRATAFAISVINDKA 159 (280)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHTC---C
T ss_pred HHHHHHHHhhCCCHHHHHHHHHHHHhcCCHH
Confidence 3566777788888888888888887777653
No 60
>3kat_A Nacht, LRR and PYD domains-containing protein 1; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 3.10A {Homo sapiens}
Probab=25.10 E-value=47 Score=28.66 Aligned_cols=42 Identities=5% Similarity=0.063 Sum_probs=33.2
Q ss_pred HHhcchhhhhhhHHHHHHHhcCCcchhhhHHhhhchhhHHHhhh
Q 045086 306 IMKQKKSAYASAIRALDFAMTKYPPACERFVDVLGLKTAFAAFM 349 (522)
Q Consensus 306 mlkekk~sr~~AlKvLD~Al~~~~~~C~~fVe~~GLktlF~~FM 349 (522)
.++.++.+...|-++||...+.++.+|+.|.+++ +...|.++
T Consensus 55 ~I~ae~T~q~k~R~Lld~v~~kG~~A~~~F~~~L--~e~dp~L~ 96 (107)
T 3kat_A 55 RVLAENTRPSQMRKLFSLSQSWDRKCKDGLYQAL--KETHPHLI 96 (107)
T ss_dssp HHHHCCSHHHHHHHHHHGGGGCCTTHHHHHHHHH--HHHCHHHH
T ss_pred HHHhCCCCHHHHHHHHHHhhcCCHHHHHHHHHHH--HHcCHHHH
Confidence 4566678888899999999988999999999996 44444444
No 61
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A*
Probab=24.78 E-value=48 Score=34.21 Aligned_cols=91 Identities=19% Similarity=0.322 Sum_probs=57.4
Q ss_pred CchHHHHHHHHHhcChHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHHhhhccC----hhHHHHHhhhhchHHHHHhhcc
Q 045086 140 DEPARVLVDALIENNVLELLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVK----PSVAELVCERTKLLRWLLGKIK 215 (522)
Q Consensus 140 ~e~~~~Lv~aL~~~~~~~lLv~nL~RldE~~~~e~e~~gV~~~L~iiENl~e~~----p~~a~~~~~~t~ll~wLL~Ri~ 215 (522)
.|....|+..+...+++.+|+.||.+|+=. ..-|..-|++ |++--+ +..+.-++++..++.+|++--.
T Consensus 64 ~e~~~qL~~ei~~~dll~~Li~~l~~L~fE--~RKd~~~if~------~llr~~~~~~~p~v~Yl~~~peil~~L~~gYe 135 (341)
T 1upk_A 64 TEAVAQLAQELYNSGLLSTLVADLQLIDFE--GKKDVAQIFN------NILRRQIGTRTPTVEYICTQQNILFMLLKGYE 135 (341)
T ss_dssp HHHHHHHHHHHHHHSHHHHHHHTGGGSCHH--HHHHHHHHHH------HHHTCCBTTBCHHHHHHHTCTHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHhCHHHHHHHhcccCCch--hhccHHHHHH------HHHhcccCCCCchhHHHHcCHHHHHHHHHhhc
Confidence 457889999999999999999999999654 3334444444 344432 2345556667777777776554
Q ss_pred ccCCChhhhhHHHHHHHHhcCChHHH
Q 045086 216 VREFDSNKQYASEILAILLQNSTANQ 241 (522)
Q Consensus 216 ~k~~d~Nk~YAsEiLaILLQ~s~~nr 241 (522)
..+ --+.|-.||-.++....-++
T Consensus 136 ~~d---iAl~~G~mLRecir~e~la~ 158 (341)
T 1upk_A 136 SPE---IALNCGIMLRECIRHEPLAK 158 (341)
T ss_dssp STT---THHHHHHHHHHHHTSHHHHH
T ss_pred cch---hHhHHHHHHHHHHHhHHHHH
Confidence 322 23456666665555444444
No 62
>1ho8_A Vacuolar ATP synthase subunit H; heat repeat, hydrolase; 2.95A {Saccharomyces cerevisiae} SCOP: a.118.1.9
Probab=24.55 E-value=4e+02 Score=28.54 Aligned_cols=139 Identities=15% Similarity=0.152 Sum_probs=0.0
Q ss_pred HHHHHHhhhccC----hhHHHHHhhhhchHHHHHhhccccCCChhhh-----------------------hHHHHHHHHh
Q 045086 182 TLATIENLIEVK----PSVAELVCERTKLLRWLLGKIKVREFDSNKQ-----------------------YASEILAILL 234 (522)
Q Consensus 182 ~L~iiENl~e~~----p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~-----------------------YAsEiLaILL 234 (522)
+++++=|+++.. +.++..+.-..+.++ +++-++.+.|++--+ |++|+.+=.|
T Consensus 292 ~la~l~Nll~~~~~~~~~~~~~~~~~~~~l~-~l~~L~~rk~~Dedl~edl~~L~e~L~~~~~~ltsfDeY~~El~sG~L 370 (480)
T 1ho8_A 292 CISIILQCCSTRVKQHKKVIKQLLLLGNALP-TVQSLSERKYSDEELRQDISNLKEILENEYQELTSFDEYVAELDSKLL 370 (480)
T ss_dssp HHHHHHHTTSSSSTTHHHHHHHHHHHHCHHH-HHHHHHSSCCSSHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhcccchhhhhHHHHHHHHccchH-HHHHHhhCCCCcHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHhcCCc
Q ss_pred cCCh---------HHHHHhhhhch--HHHHHHHHh-hcccCCCC-CCcHHHHHHhHHHHHHHhhCChhhHHHHHHhhhHH
Q 045086 235 QNST---------ANQKRLGQMNG--VDVLLQAVA-MYKSKDPK-TSDEEEMLENLFDSLCCVLMPLENKERFVKAEGVE 301 (522)
Q Consensus 235 Q~s~---------~nr~~~~~~dG--iD~LL~~la-~YrkrDP~-~~eE~E~mENlFd~Lcs~L~~~~nk~~Fl~~EGve 301 (522)
.-|+ +|-.+|.+.|+ +-.|..+|. ....+|-. +.+..=..=-+||.=+.+=..|.+|..--+.-|=+
T Consensus 371 ~WSP~H~se~FW~ENa~kf~e~~~~llk~L~~iL~~~~~~~~~~~s~d~~~laVAc~Digefvr~~P~gr~i~~~lg~K~ 450 (480)
T 1ho8_A 371 CWSPPHVDNGFWSDNIDEFKKDNYKIFRQLIELLQAKVRNGDVNAKQEKIIIQVALNDITHVVELLPESIDVLDKTGGKA 450 (480)
T ss_dssp CCCGGGGCHHHHHHHSGGGSSGGGHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHSHHH
T ss_pred ccCCCccchhHHHHHHHHHHhcchHHHHHHHHHHhhhccccccccCCCcceEEeecccHHHHHHHCcchhHHHHHcCcHH
Q ss_pred HHHHHHhcc-hhhhhhhHHHH
Q 045086 302 LMIIIMKQK-KSAYASAIRAL 321 (522)
Q Consensus 302 LM~lmlkek-k~sr~~AlKvL 321 (522)
..+.+|... .--|.-||+++
T Consensus 451 ~VM~Lm~h~d~~Vr~~AL~av 471 (480)
T 1ho8_A 451 DIMELLNHSDSRVKYEALKAT 471 (480)
T ss_dssp HHHHHTSCSSHHHHHHHHHHH
T ss_pred HHHHHhcCCCHHHHHHHHHHH
Done!