Citrus Sinensis ID: 045092

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------
Protein Sequence
HWSLHINCCGKQVIADGNTTFEDDSDAAGASKLAPLSRKTYISWLHSESACEEILFLKINPVISSIELKGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWVTLALT
Secondary Structure (PSIPRED)
cccccHHHHHHHHcccccEEEEEccccccccEEEEEEcccHHHHcccccccccEEEEccccccccccccccccccccccHHHHHHHHccccccccccccccccccEEEcccccEEEEEEccccccccHHHHHHHHHHHHHHcccccccEEccccccccccEEEEcccccccccccccccHHcHHHHHHHHHHcccEEEEEcccccEEEEccccccHHHccccccccccccccccccccccccccccccEEEcccccccccccccccccccccHHHEEEEEcccccccccccccccccHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccccccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccHccccccccccEcHHHHHHHHccccHHHcccccccccEEEcEcccccEEEEEEEccccccccHHHHHHHHHHHHHHcHcHHEEEEEEEccccEEEEEEEccccHHHHHcccccccccHHHHHHHHHHHHHHHHHHccccEEEEcccHcHEEEcccccccHHcHccHcEEccccccccEEEEEEEccHccccHHHccccccHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHcc
Coil and Loop (DISEMBL)
hwslhinccgkqviadgnttfeddsdaagasklaplsRKTYISWLHSESACEEILFLKINpvissielkgldlptgsfHLRQIKAATNnfaseneisergfgpvyrglladgkVIEVKQLSSKSKQGNREIVNEIGMIsalqhpnlVKLYRLCTETLkqpivymapeyakhgyltdkaevcSFGIVTLEIesgrsnvicrtkedkFYLLDWLGSYLKRARklngascskFGFKFyrrtsdgndqcsssvtptnrpLMSFVVSMLEDKAEVCSFGIVTLEIesgrsnvicrtkedkfylLDWVTLALT
Flexible Loop (DISEMBL)
HWSLHINCCGKQVIADGNTTFEDDSDAAGASKLAPLSRKTYISWLHSESACEEILFLKINPVISSIELKGLDLPTGSFHLRQIKAATnnfaseneisergfGPVYRGLLADGKVIEVKqlsskskqgnrEIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLeiesgrsnvicrtkedKFYLLDWLGSYLKRARKLNGASCSKFGFKFYrrtsdgndqcsssvtptnrPLMSFVVSMLEDKAEVCSFGIVTleiesgrsnvicrtkedkfylldwvtlalt
Low Complexity Region (SEG)
HWSLHINCCGKQVIADGNTTFEDDSDAAGASKLAPLSRKTYISWLHSESACEEILFLKINPVISSIELKGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWVTLALT
Disordered region (IsUnstruct)
**SLHINCCGKQVIADGNTTF************APLSRKTYISWLHSESACEEILFLKINPVISSIELKGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVK***********EIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRR*****************PLMSFVVSMLEDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWVTLA**
Disordered Region (DISOPRED)
HWSLHINCCGKQVIADGNTTFEDDSDAAGASKLAPLSRKTYISWLHSESAC************************GSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLS******NREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWVTLALT
Disordered Region (DISEMBL)
HWSLHINCCGKQVIADGNTTFEDDSDAAGASKLAPLSRKTYISWLHSESACEEILFLKINPVISSIELKGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTS**********TPTNRPLMSFVVSMLEDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWVTLALT
Disordered Region (DISPRO)
********CGKQVIADGNTTFEDDSDAAGASKLAPLSRKTYISWLHSESA*****************LKGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWVTLALT
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
HWSLHINCCGKQVIADGNTTFEDDSDAAGASKLAPLSRKTYISWLHSESACEEILFLKINPVISSIELKGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWVTLALT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	307	2.2.26 [Sep-21-2011]
C0LGG8	1038	Probable LRR receptor-lik	yes	no	0.710	0.210	0.466	1e-42
C0LGG9	1035	Probable LRR receptor-lik	no	no	0.710	0.210	0.466	3e-42
C0LGE0	1014	Probable LRR receptor-lik	no	no	0.713	0.215	0.443	5e-40
C0LGN2	1020	Probable leucine-rich rep	no	no	0.713	0.214	0.422	2e-38
C0LGG7	953	Probable LRR receptor-lik	no	no	0.713	0.229	0.426	6e-38
Q9ASQ6	1019	Probable LRR receptor-lik	no	no	0.723	0.217	0.377	1e-29
Q9FXF2	1021	Probable LRR receptor-lik	no	no	0.328	0.098	0.567	8e-27
C0LGH2	1032	Probable LRR receptor-lik	no	no	0.732	0.218	0.354	1e-22
C0LGH3	1033	Probable LRR receptor-lik	no	no	0.710	0.211	0.345	1e-22
O81906	849	G-type lectin S-receptor-	no	no	0.671	0.242	0.348	4e-19

>sp|C0LGG8|Y5343_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1

 Score =  173 bits (439), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/257 (46%), Positives = 147/257 (57%), Gaps = 39/257 (15%)

Query: 67  ELKGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQ 126
           EL+GLDL TGSF L+QIK ATNNF  EN+I E GFGPVY+G+LADG  I VKQLSSKSKQ
Sbjct: 646 ELRGLDLQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQ 705

Query: 127 GNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYL------------ 174
           GNRE V EIGMISALQHPNLVKLY  C E  +  +VY   EY ++  L            
Sbjct: 706 GNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVY---EYLENNSLARALFGTEKQRL 762

Query: 175 ----TDKAEVC---SFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC 227
               + + ++C   + G+  L  ES R  ++ R  +    LLD           LN A  
Sbjct: 763 HLDWSTRNKICIGIAKGLAYLHEES-RLKIVHRDIKATNVLLDL---------SLN-AKI 811

Query: 228 SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM---LEDKAEVCSFGIVTLEIESGR 284
           S FG    +   D N   S+ +  T    M+   +M   L DKA+V SFG+V LEI SG+
Sbjct: 812 SDFGLA--KLNDDENTHISTRIAGT-IGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGK 868

Query: 285 SNVICRTKEDKFYLLDW 301
           SN   R KE+  YLLDW
Sbjct: 869 SNTNYRPKEEFVYLLDW 885

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|C0LGG9|Y5344_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2

 Score =  172 bits (435), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/257 (46%), Positives = 147/257 (57%), Gaps = 39/257 (15%)

Query: 67  ELKGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQ 126
           EL+GLDL TGSF L+QIK ATNNF  EN+I E GFGPVY+G+LADG  I VKQLSSKSKQ
Sbjct: 644 ELRGLDLQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQ 703

Query: 127 GNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYL------------ 174
           GNRE V EIGMISALQHPNLVKLY  C E  +  +VY   EY ++  L            
Sbjct: 704 GNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVY---EYLENNSLARALFGTEKQRL 760

Query: 175 ----TDKAEVC---SFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC 227
               + + +VC   + G+  L  ES R  ++ R  +    LLD           LN A  
Sbjct: 761 HLDWSTRNKVCIGIAKGLAYLHEES-RLKIVHRDIKATNVLLDL---------SLN-AKI 809

Query: 228 SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM---LEDKAEVCSFGIVTLEIESGR 284
           S FG    +   + N   S+ +  T    M+   +M   L DKA+V SFG+V LEI SG+
Sbjct: 810 SDFGLA--KLDEEENTHISTRIAGT-IGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGK 866

Query: 285 SNVICRTKEDKFYLLDW 301
           SN   R KE+  YLLDW
Sbjct: 867 SNTNYRPKEEFIYLLDW 883

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGE0|Y1765_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1

 Score =  165 bits (417), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 114/257 (44%), Positives = 144/257 (56%), Gaps = 38/257 (14%)

Query: 67  ELKGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQ 126
           EL+GLDL TG+F LRQIKAAT+NF    +I E GFG VY+G L++GK+I VKQLS+KS+Q
Sbjct: 655 ELRGLDLQTGTFTLRQIKAATDNFDVTRKIGEGGFGSVYKGELSEGKLIAVKQLSAKSRQ 714

Query: 127 GNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLT----DKAEVCS 182
           GNRE VNEIGMISALQHPNLVKLY  C E  +  +VY   EY ++  L+     K E   
Sbjct: 715 GNREFVNEIGMISALQHPNLVKLYGCCVEGNQLILVY---EYLENNCLSRALFGKDESSR 771

Query: 183 FGI---------------VTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC 227
             +               +T   E  R  ++ R  +    LLD         + LN A  
Sbjct: 772 LKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLD---------KDLN-AKI 821

Query: 228 SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM---LEDKAEVCSFGIVTLEIESGR 284
           S FG    +   DGN   S+ +  T    M+   +M   L +KA+V SFG+V LEI SG+
Sbjct: 822 SDFGLA--KLNDDGNTHISTRIAGT-IGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGK 878

Query: 285 SNVICRTKEDKFYLLDW 301
           SN   R  ED  YLLDW
Sbjct: 879 SNTNFRPTEDFVYLLDW 895

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGN2|Y3148_ARATH Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 OS=Arabidopsis thaliana GN=LRR-RLK PE=1 SV=1

 Score =  159 bits (403), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/258 (42%), Positives = 142/258 (55%), Gaps = 39/258 (15%)

Query: 67  ELKGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQ 126
           + K LD    SF LRQIK AT+NF   N+I E GFGPV++G++ DG VI VKQLS+KSKQ
Sbjct: 649 DFKNLDFQISSFSLRQIKVATDNFDPANKIGEGGFGPVHKGIMTDGTVIAVKQLSAKSKQ 708

Query: 127 GNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTD---------- 176
           GNRE +NEI MISALQHP+LVKLY  C E  +  +VY   EY ++  L            
Sbjct: 709 GNREFLNEIAMISALQHPHLVKLYGCCVEGDQLLLVY---EYLENNSLARALFGPQETQI 765

Query: 177 ------KAEVC---SFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC 227
                 + ++C   + G+  L  ES R  ++ R  +    LLD         ++LN    
Sbjct: 766 PLNWPMRQKICVGIARGLAYLHEES-RLKIVHRDIKATNVLLD---------KELN-PKI 814

Query: 228 SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM---LEDKAEVCSFGIVTLEIESGR 284
           S FG    +   + N   S+ V  T    M+   +M   L DKA+V SFG+V LEI  G+
Sbjct: 815 SDFGLA--KLDEEENTHISTRVAGT-YGYMAPEYAMRGHLTDKADVYSFGVVALEIVHGK 871

Query: 285 SNVICRTKEDKFYLLDWV 302
           SN   R+K D FYLLDWV
Sbjct: 872 SNTSSRSKADTFYLLDWV 889

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGG7|Y1534_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2

 Score =  157 bits (398), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/258 (42%), Positives = 142/258 (55%), Gaps = 39/258 (15%)

Query: 67  ELKGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQ 126
           + K L+L   SF LRQIK ATNNF S N I E GFGPVY+G L DG +I VKQLS+ SKQ
Sbjct: 601 DFKSLELMIASFSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTIIAVKQLSTGSKQ 660

Query: 127 GNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLT----------- 175
           GNRE +NEIGMISAL HPNLVKLY  C E  +  +VY   E+ ++  L            
Sbjct: 661 GNREFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVY---EFVENNSLARALFGPQETQL 717

Query: 176 -----DKAEVC---SFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC 227
                 + ++C   + G+  L  ES R  ++ R  +    LLD         ++LN    
Sbjct: 718 RLDWPTRRKICIGVARGLAYLHEES-RLKIVHRDIKATNVLLD---------KQLN-PKI 766

Query: 228 SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM---LEDKAEVCSFGIVTLEIESGR 284
           S FG    +   + +   S+ +  T    M+   +M   L DKA+V SFGIV LEI  GR
Sbjct: 767 SDFGLA--KLDEEDSTHISTRIAGT-FGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGR 823

Query: 285 SNVICRTKEDKFYLLDWV 302
           SN I R+K + FYL+DWV
Sbjct: 824 SNKIERSKNNTFYLIDWV 841

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ASQ6|Y1972_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g29720 OS=Arabidopsis thaliana GN=RFK1 PE=2 SV=3

 Score =  130 bits (327), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/249 (37%), Positives = 130/249 (52%), Gaps = 27/249 (10%)

Query: 68  LKGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQG 127
           L+   L T  F  RQ++ ATNNF   N++ E GFG V++G L+DG +I VKQLSSKS QG
Sbjct: 651 LRAQGLQTVCFSWRQLQTATNNFDQANKLGEGGFGSVFKGELSDGTIIAVKQLSSKSSQG 710

Query: 128 NREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVT 187
           NRE VNEIGMIS L HPNLVKLY  C E  +  +VY   EY ++  L     +  FG  +
Sbjct: 711 NREFVNEIGMISGLNHPNLVKLYGCCVERDQLLLVY---EYMENNSLA----LALFGQNS 763

Query: 188 LEIE-SGRSNVICRTKEDKFYLLDWLGSYLKRARK------------LNGASCSKFGFKF 234
           L+++ + R  +         +L D  GS ++   +            LN A  S FG   
Sbjct: 764 LKLDWAARQKICVGIARGLEFLHD--GSAMRMVHRDIKTTNVLLDTDLN-AKISDFGLA- 819

Query: 235 YRRTSDGNDQCSSSVTPTNRPLMS--FVVSMLEDKAEVCSFGIVTLEIESGRSNVICRTK 292
            R     +   S+ V  T   +     +   L +KA+V SFG+V +EI SG+SN   +  
Sbjct: 820 -RLHEAEHTHISTKVAGTIGYMAPEYALWGQLTEKADVYSFGVVAMEIVSGKSNTKQQGN 878

Query: 293 EDKFYLLDW 301
            D   L++W
Sbjct: 879 ADSVSLINW 887

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FXF2|RKF1_ARATH Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1

 Score =  121 bits (303), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 59/104 (56%), Positives = 78/104 (75%), Gaps = 3/104 (2%)

Query: 72  DLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREI 131
           +LP+G+F LRQIK AT++F   N+I E GFG V++G+LADG+V+ VKQLSSKS+QGNRE 
Sbjct: 663 ELPSGTFTLRQIKFATDDFNPTNKIGEGGFGAVFKGVLADGRVVAVKQLSSKSRQGNREF 722

Query: 132 VNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLT 175
           +NEIG IS LQHPNLVKL+  C E  +  + Y   EY ++  L+
Sbjct: 723 LNEIGAISCLQHPNLVKLHGFCVERAQLLLAY---EYMENNSLS 763

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGH2|Y1561_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2

 Score =  107 bits (267), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/248 (35%), Positives = 122/248 (49%), Gaps = 23/248 (9%)

Query: 67  ELKGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQ 126
           EL G+D+    F   ++K+AT +F   N++ E GFGPVY+G L DG+V+ VK LS  S+Q
Sbjct: 671 ELLGMDVKPYIFTYSELKSATQDFDPSNKLGEGGFGPVYKGNLNDGRVVAVKLLSVGSRQ 730

Query: 127 GNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIV 186
           G  + V EI  IS++ H NLVKLY  C E   + +VY   EY  +G L D+A    FG  
Sbjct: 731 GKGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVY---EYLPNGSL-DQAL---FGDK 783

Query: 187 TLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGAS----------CSKFGF-KFY 235
           TL ++      IC         L    S     R +  ++           S FG  K Y
Sbjct: 784 TLHLDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLY 843

Query: 236 RRTSDGNDQCSSSVTPTNRPLMS--FVVSMLEDKAEVCSFGIVTLEIESGRSNVICRTKE 293
               D     S+ V  T   L     +   L +K +V +FG+V LE+ SGR N     +E
Sbjct: 844 ---DDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEE 900

Query: 294 DKFYLLDW 301
           +K YLL+W
Sbjct: 901 EKKYLLEW 908

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGH3|Y5614_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2

 Score =  107 bits (267), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/255 (34%), Positives = 126/255 (49%), Gaps = 37/255 (14%)

Query: 67  ELKGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQ 126
           E+  +D+   +F   ++K+AT +F   N++ E GFGPVY+G L DG+ + VK LS  S+Q
Sbjct: 670 EILSMDVKPYTFTYSELKSATQDFDPSNKLGEGGFGPVYKGKLNDGREVAVKLLSVGSRQ 729

Query: 127 GNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYL------------ 174
           G  + V EI  ISA+QH NLVKLY  C E   + +VY   EY  +G L            
Sbjct: 730 GKGQFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVY---EYLPNGSLDQALFGEKTLHL 786

Query: 175 --TDKAEVC---SFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK 229
             + + E+C   + G+V L  E  R  ++ R  +    LLD          KL     S 
Sbjct: 787 DWSTRYEICLGVARGLVYLH-EEARLRIVHRDVKASNILLD---------SKLV-PKVSD 835

Query: 230 FGF-KFYRRTSDGNDQCSSSVTPTNRPLMS--FVVSMLEDKAEVCSFGIVTLEIESGRSN 286
           FG  K Y    D     S+ V  T   L     +   L +K +V +FG+V LE+ SGR N
Sbjct: 836 FGLAKLY---DDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPN 892

Query: 287 VICRTKEDKFYLLDW 301
                +++K YLL+W
Sbjct: 893 SDENLEDEKRYLLEW 907

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81906|B120_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana GN=B120 PE=1 SV=1

 Score = 95.9 bits (237), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/241 (34%), Positives = 118/241 (48%), Gaps = 35/241 (14%)

Query: 72  DLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREI 131
           +LP   F L  I  ATN+F  ENE+   GFGPVY+G+L DG+ I VK+LS KS QG  E 
Sbjct: 513 ELPV--FSLNAIAIATNDFCKENELGRGGFGPVYKGVLEDGREIAVKRLSGKSGQGVDEF 570

Query: 132 VNEIGMISALQHPNLVKLYRLCTETLKQPIVY-MAPEYAKHGYLTDKA------------ 178
            NEI +I+ LQH NLV+L   C E  ++ +VY   P  +   +L D+             
Sbjct: 571 KNEIILIAKLQHRNLVRLLGCCFEGEEKMLVYEYMPNKSLDFFLFDETKQALIDWKLRFS 630

Query: 179 --EVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR 236
             E  + G++ L  +S R  +I R  +    LLD          ++N    S FG     
Sbjct: 631 IIEGIARGLLYLHRDS-RLRIIHRDLKVSNVLLD---------AEMN-PKISDFGMA--- 676

Query: 237 RTSDGNDQCSSSVTPTNR-PLMSFVVSM---LEDKAEVCSFGIVTLEIESGRSNVICRTK 292
           R   GN   +++V        MS   +M      K++V SFG++ LEI SG+ N   R+ 
Sbjct: 677 RIFGGNQNEANTVRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIVSGKRNTSLRSS 736

Query: 293 E 293
           E
Sbjct: 737 E 737

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	307
449456691	1007	PREDICTED: probable leucine-rich repeat	0.706	0.215	0.468	2e-41
357153393	849	PREDICTED: probable LRR receptor-like se	0.869	0.314	0.413	3e-41
449503668	1007	PREDICTED: probable leucine-rich repeat	0.706	0.215	0.468	3e-41
414885099	689	TPA: putative leucine-rich repeat recept	0.736	0.328	0.468	4e-41
186490677	997	Leucine-rich repeat transmembrane protei	0.713	0.219	0.465	6e-41
15220789	1030	Leucine-rich repeat transmembrane protei	0.710	0.211	0.466	7e-41
8671883	942	Contains similarity to receptor-like ser	0.710	0.231	0.466	7e-41
264664531	1038	RecName: Full=Probable LRR receptor-like	0.710	0.210	0.466	7e-41
359493992	1014	PREDICTED: probable LRR receptor-like se	0.713	0.215	0.461	1e-40
147799980	766	hypothetical protein VITISV_042040 [Viti	0.732	0.293	0.458	1e-40

>gi|449456691|ref|XP_004146082.1| PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840-like [Cucumis sativus]

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/256 (46%), Positives = 150/256 (58%), Gaps = 39/256 (15%)

Query: 67  ELKGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQ 126
           ELKGLDL TGSF LRQI+ ATNNF + N+I E GFGPV++G+LADG +I VKQLSSKSKQ
Sbjct: 640 ELKGLDLGTGSFSLRQIRDATNNFDAANKIGEGGFGPVFKGVLADGTIIAVKQLSSKSKQ 699

Query: 127 GNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLT----------- 175
           GNRE VNEIGMISALQHP+LVKLY  C E  +  ++Y   EY ++  L            
Sbjct: 700 GNREFVNEIGMISALQHPHLVKLYGCCIEGNQLLLIY---EYLENNSLARALFGPGESQL 756

Query: 176 -----DKAEVC---SFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC 227
                 + ++C   + G+  L  ES R  ++ R  +    LLD         + L+ A  
Sbjct: 757 KLDWPTRQKICVGIARGLAYLHEES-RLKIVHRDIKATNVLLD---------KNLD-AKI 805

Query: 228 SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM---LEDKAEVCSFGIVTLEIESGR 284
           S FG    +   + N   S+ V  T    M+   +M   L DKA+V SFGIV LEI SGR
Sbjct: 806 SDFGLA--KLDEEENTHISTRVAGT-FGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGR 862

Query: 285 SNVICRTKEDKFYLLD 300
           SN   RTK+D FYLLD
Sbjct: 863 SNTSYRTKDDCFYLLD 878

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357153393|ref|XP_003576438.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650-like [Brachypodium distachyon]

 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 176/331 (53%), Gaps = 64/331 (19%)

Query: 10  GKQVIADGNTTFEDDSDAAGASKLAPLSRKTYISWLHSESACEEILFL------------ 57
           GK V+ D    F+ +  AAG+ K  P+  KT+ +++ + +   EI F             
Sbjct: 426 GKMVLED----FDIEQSAAGSGK--PI-MKTFTTYVTNHTL--EIHFYWAGRGTTGIPYR 476

Query: 58  -KINPVISSI----ELKGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADG 112
               P+IS+I     L  LDL  GSF LRQIKAAT NF   N+I E GFG VY+GLL+DG
Sbjct: 477 GFYGPLISAISVVPNLGALDLQIGSFTLRQIKAATRNFDPANKIGEGGFGSVYKGLLSDG 536

Query: 113 KVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHG 172
            +I VKQLSSKSKQGNRE VNEIGMISALQHPNLV+LY  CTE  +  +VY   EY +H 
Sbjct: 537 TIIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVRLYGCCTEGNQLLLVY---EYMEHN 593

Query: 173 YLT---------------DKAEVC---SFGIVTLEIESGRSNVICRTKEDKFYLLDWLGS 214
            L                 + ++C   + GI  L  ES    ++ R  +    LLD    
Sbjct: 594 CLARALFVEQYRLRLDWPTRHKICLGIARGIAYLHEESA-IRIVHRDIKASNILLD---- 648

Query: 215 YLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM---LEDKAEVC 271
                + L+ A  S FG    +   DG+   S+ V  T    M+   +M   L DKA+V 
Sbjct: 649 -----KDLD-AKISDFGLA--KLNEDGHTHISTKVAGT-IGYMAPEYAMRGYLTDKADVY 699

Query: 272 SFGIVTLEIESGRSNVICRTKEDKFYLLDWV 302
           SFG+V LE+ SG+SN   R KED  YLLDW 
Sbjct: 700 SFGVVALELVSGKSNTNYRPKEDFVYLLDWA 730

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449503668|ref|XP_004162117.1| PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840-like [Cucumis sativus]

 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/256 (46%), Positives = 150/256 (58%), Gaps = 39/256 (15%)

Query: 67  ELKGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQ 126
           ELKGLDL TGSF LRQI+ ATNNF + N+I E GFGPV++G+LADG +I VKQLSSKSKQ
Sbjct: 640 ELKGLDLGTGSFSLRQIRDATNNFDAANKIGEGGFGPVFKGVLADGTIIAVKQLSSKSKQ 699

Query: 127 GNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLT----------- 175
           GNRE VNEIGMISALQHP+LVKLY  C E  +  ++Y   EY ++  L            
Sbjct: 700 GNREFVNEIGMISALQHPHLVKLYGCCIEGNQLLLIY---EYLENNSLARALFGPGESQL 756

Query: 176 -----DKAEVC---SFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC 227
                 + ++C   + G+  L  ES R  ++ R  +    LLD         + L+ A  
Sbjct: 757 KLDWPTRQKICVGIARGLAYLHEES-RLKIVHRDIKATNVLLD---------KNLD-AKI 805

Query: 228 SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM---LEDKAEVCSFGIVTLEIESGR 284
           S FG    +   + N   S+ V  T    M+   +M   L DKA+V SFGIV LEI SGR
Sbjct: 806 SDFGLA--KLDEEENTHISTRVAGT-FGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGR 862

Query: 285 SNVICRTKEDKFYLLD 300
           SN   RTK+D FYLLD
Sbjct: 863 SNTSYRTKDDCFYLLD 878

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|414885099|tpg|DAA61113.1| TPA: putative leucine-rich repeat receptor-like protein kinase family protein [Zea mays]

 Score =  174 bits (441), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 117/250 (46%), Positives = 142/250 (56%), Gaps = 24/250 (9%)

Query: 67  ELKGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQ 126
           EL+ LDL  GSF LRQIKAAT NF + N+I E GFG VY+GLL+DG +I VKQLSS+SKQ
Sbjct: 333 ELRALDLQIGSFTLRQIKAATRNFDAANKIGEGGFGSVYKGLLSDGTIIAVKQLSSRSKQ 392

Query: 127 GNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIV 186
           GNRE VNEIGMISALQHPNLVKLY  CTE  +  +VY   EY ++  L     V  +   
Sbjct: 393 GNREFVNEIGMISALQHPNLVKLYGCCTEGNQLSLVY---EYMENNCLARALFVEQY--- 446

Query: 187 TLEIESGRSNVICRTKEDKFYLL-----------DWLGSYLKRARKLNGASCSKFGFKFY 235
            L ++ G  + IC         L           D   S +   + LN A  S FG    
Sbjct: 447 RLRMDWGTRHKICLGIAKGLAYLHEESAIRIVHRDIKASNILLDKDLN-AKISDFGLA-- 503

Query: 236 RRTSDGNDQCSSSVTPTNRPLMSFVVSM---LEDKAEVCSFGIVTLEIESGRSNVICRTK 292
           +   D +   S+ V  T    M+   +M   L DKA+V SFG+V LEI SG+SN   R K
Sbjct: 504 KLNEDDHTHISTKVAGT-IGYMAPEYAMRGYLTDKADVYSFGVVVLEIVSGKSNTNYRPK 562

Query: 293 EDKFYLLDWV 302
           ED  YLLDW 
Sbjct: 563 EDFVYLLDWA 572

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186490677|ref|NP_001117479.1| Leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] gi|332194819|gb|AEE32940.1| Leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana]

 Score =  174 bits (440), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 120/258 (46%), Positives = 147/258 (56%), Gaps = 39/258 (15%)

Query: 67  ELKGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQ 126
           EL+GLDL TGSF L+QIK ATNNF  EN+I E GFGPVY+G+LADG  I VKQLSSKSKQ
Sbjct: 605 ELRGLDLQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQ 664

Query: 127 GNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYL------------ 174
           GNRE V EIGMISALQHPNLVKLY  C E  +  +VY   EY ++  L            
Sbjct: 665 GNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVY---EYLENNSLARALFGTEKQRL 721

Query: 175 ----TDKAEVC---SFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC 227
               + + ++C   + G+  L  ES R  ++ R  +    LLD           LN A  
Sbjct: 722 HLDWSTRNKICIGIAKGLAYLHEES-RLKIVHRDIKATNVLLDL---------SLN-AKI 770

Query: 228 SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM---LEDKAEVCSFGIVTLEIESGR 284
           S FG    +   D N   S+ +  T    M+   +M   L DKA+V SFG+V LEI SG+
Sbjct: 771 SDFGLA--KLNDDENTHISTRIAGT-IGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGK 827

Query: 285 SNVICRTKEDKFYLLDWV 302
           SN   R KE+  YLLDW 
Sbjct: 828 SNTNYRPKEEFVYLLDWA 845

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15220789|ref|NP_175748.1| Leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] gi|332194818|gb|AEE32939.1| Leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana]

 Score =  173 bits (439), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 120/257 (46%), Positives = 147/257 (57%), Gaps = 39/257 (15%)

Query: 67  ELKGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQ 126
           EL+GLDL TGSF L+QIK ATNNF  EN+I E GFGPVY+G+LADG  I VKQLSSKSKQ
Sbjct: 638 ELRGLDLQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQ 697

Query: 127 GNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYL------------ 174
           GNRE V EIGMISALQHPNLVKLY  C E  +  +VY   EY ++  L            
Sbjct: 698 GNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVY---EYLENNSLARALFGTEKQRL 754

Query: 175 ----TDKAEVC---SFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC 227
               + + ++C   + G+  L  ES R  ++ R  +    LLD           LN A  
Sbjct: 755 HLDWSTRNKICIGIAKGLAYLHEES-RLKIVHRDIKATNVLLDL---------SLN-AKI 803

Query: 228 SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM---LEDKAEVCSFGIVTLEIESGR 284
           S FG    +   D N   S+ +  T    M+   +M   L DKA+V SFG+V LEI SG+
Sbjct: 804 SDFGLA--KLNDDENTHISTRIAGT-IGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGK 860

Query: 285 SNVICRTKEDKFYLLDW 301
           SN   R KE+  YLLDW
Sbjct: 861 SNTNYRPKEEFVYLLDW 877

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|8671883|gb|AAF78446.1|AC018748_25 Contains similarity to receptor-like serine/threonine kinase from Arabidopsis thaliana gb|AF024648 and contains multiple leucine rich PF|00560 repeats and protein kinase PF|00069 domain. ESTs gb|T04455, gb|N38129 come from this gene [Arabidopsis thaliana]

 Score =  173 bits (439), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 120/257 (46%), Positives = 147/257 (57%), Gaps = 39/257 (15%)

Query: 67  ELKGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQ 126
           EL+GLDL TGSF L+QIK ATNNF  EN+I E GFGPVY+G+LADG  I VKQLSSKSKQ
Sbjct: 550 ELRGLDLQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQ 609

Query: 127 GNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYL------------ 174
           GNRE V EIGMISALQHPNLVKLY  C E  +  +VY   EY ++  L            
Sbjct: 610 GNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVY---EYLENNSLARALFGTEKQRL 666

Query: 175 ----TDKAEVC---SFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC 227
               + + ++C   + G+  L  ES R  ++ R  +    LLD           LN A  
Sbjct: 667 HLDWSTRNKICIGIAKGLAYLHEES-RLKIVHRDIKATNVLLDL---------SLN-AKI 715

Query: 228 SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM---LEDKAEVCSFGIVTLEIESGR 284
           S FG    +   D N   S+ +  T    M+   +M   L DKA+V SFG+V LEI SG+
Sbjct: 716 SDFGLA--KLNDDENTHISTRIAGT-IGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGK 772

Query: 285 SNVICRTKEDKFYLLDW 301
           SN   R KE+  YLLDW
Sbjct: 773 SNTNYRPKEEFVYLLDW 789

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|264664531|sp|C0LGG8.1|Y5343_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g53430; Flags: Precursor gi|224589438|gb|ACN59253.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana]

 Score =  173 bits (439), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 120/257 (46%), Positives = 147/257 (57%), Gaps = 39/257 (15%)

Query: 67  ELKGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQ 126
           EL+GLDL TGSF L+QIK ATNNF  EN+I E GFGPVY+G+LADG  I VKQLSSKSKQ
Sbjct: 646 ELRGLDLQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQ 705

Query: 127 GNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYL------------ 174
           GNRE V EIGMISALQHPNLVKLY  C E  +  +VY   EY ++  L            
Sbjct: 706 GNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVY---EYLENNSLARALFGTEKQRL 762

Query: 175 ----TDKAEVC---SFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC 227
               + + ++C   + G+  L  ES R  ++ R  +    LLD           LN A  
Sbjct: 763 HLDWSTRNKICIGIAKGLAYLHEES-RLKIVHRDIKATNVLLDL---------SLN-AKI 811

Query: 228 SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM---LEDKAEVCSFGIVTLEIESGR 284
           S FG    +   D N   S+ +  T    M+   +M   L DKA+V SFG+V LEI SG+
Sbjct: 812 SDFGLA--KLNDDENTHISTRIAGT-IGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGK 868

Query: 285 SNVICRTKEDKFYLLDW 301
           SN   R KE+  YLLDW
Sbjct: 869 SNTNYRPKEEFVYLLDW 885

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493992|ref|XP_003634705.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440-like [Vitis vinifera]

 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/258 (46%), Positives = 147/258 (56%), Gaps = 39/258 (15%)

Query: 67  ELKGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQ 126
           EL+ L + TG F LRQIKAATNNF S N+I E GFGPVY+G+L+DG VI VKQLSSKSKQ
Sbjct: 636 ELRELGMQTGYFSLRQIKAATNNFDSANKIGEGGFGPVYKGVLSDGSVIAVKQLSSKSKQ 695

Query: 127 GNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLT----------- 175
           GNRE VNEIGMISALQHPNLVKLY  C E  +  ++Y   EY ++  L            
Sbjct: 696 GNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIY---EYLENNCLARALFGSEEQRL 752

Query: 176 -----DKAEVC---SFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC 227
                 + ++C   + G+  L  ES R  ++ R  +    LLD         + LN A  
Sbjct: 753 NLDWPTRKKICLGIARGLAYLHEES-RLKIVHRDIKATNVLLD---------KNLN-AKI 801

Query: 228 SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM---LEDKAEVCSFGIVTLEIESGR 284
           S FG    +   D N   S+ +  T    M+   +M   L DKA+V SFGIV LEI SG+
Sbjct: 802 SDFGLA--KLDEDENTHISTRIAGT-IGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGK 858

Query: 285 SNVICRTKEDKFYLLDWV 302
           SN   R KE+  YLLDW 
Sbjct: 859 SNTNYRPKEEFVYLLDWA 876

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147799980|emb|CAN70496.1| hypothetical protein VITISV_042040 [Vitis vinifera]

 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/266 (45%), Positives = 152/266 (57%), Gaps = 41/266 (15%)

Query: 61  PVISSIEL--KGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVK 118
           P+IS+I +  K  +L TG F LRQIKAATNNF S N+I E GFGPVY+G+L+DG VI VK
Sbjct: 374 PLISAIAVTPKLRELGTGYFSLRQIKAATNNFDSANKIGEGGFGPVYKGVLSDGSVIAVK 433

Query: 119 QLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLT--- 175
           QLSSKSKQGNRE VNEIGMISALQHPNLVKLY  C E  +  ++Y   EY ++  L    
Sbjct: 434 QLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIY---EYLENNSLARAL 490

Query: 176 -------------DKAEVC---SFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRA 219
                         + ++C   + G+  L  ES R  ++ R  +    LLD         
Sbjct: 491 FGRDEQRLNLDWPTRKKICLGIARGLAYLHEES-RLKIVHRDIKATNVLLD--------- 540

Query: 220 RKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM---LEDKAEVCSFGIV 276
           + LN A  S FG    +   D N   S+ +  T    M+   +M   L DKA+V SFGIV
Sbjct: 541 KNLN-AKISDFGLA--KLDEDENTHISTRIAGT-IGYMAPEYAMRGYLTDKADVYSFGIV 596

Query: 277 TLEIESGRSNVICRTKEDKFYLLDWV 302
            LEI SG+SN   R KE+  YLLDW 
Sbjct: 597 ALEIVSGKSNTNYRPKEEFVYLLDWA 622

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	307
TAIR|locus:2203718	1035	AT1G53440 [Arabidopsis thalian	0.755	0.224	0.460	7.4e-43
TAIR|locus:2203847	1021	RKF1 "receptor-like kinase in	0.328	0.098	0.567	1.7e-39
TAIR|locus:2009630	953	AT1G53420 [Arabidopsis thalian	0.758	0.244	0.422	1.7e-36
TAIR|locus:2019317	969	AT1G29730 [Arabidopsis thalian	0.908	0.287	0.392	1e-35
TAIR|locus:2019367	1078	AT1G29740 [Arabidopsis thalian	0.703	0.200	0.391	5e-29
TAIR|locus:2200923	802	AT1G61550 [Arabidopsis thalian	0.348	0.133	0.448	1.9e-24
TAIR|locus:2205250	1032	AT1G56130 [Arabidopsis thalian	0.732	0.218	0.358	5.5e-24
TAIR|locus:2034344	381	ASG5 "ALTERED SEED GERMINATION	0.315	0.254	0.45	2.1e-23
TAIR|locus:2017923	390	AT1G16670 [Arabidopsis thalian	0.710	0.558	0.331	2.3e-22
TAIR|locus:2205260	1047	AT1G56120 [Arabidopsis thalian	0.752	0.220	0.338	2.9e-22

TAIR|locus:2203718 AT1G53440 [Arabidopsis thaliana (taxid:3702)]

 Score = 427 (155.4 bits), Expect = 7.4e-43, Sum P(2) = 7.4e-43
 Identities = 112/243 (46%), Positives = 141/243 (58%)

Query:    67 ELKGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQ 126
             EL+GLDL TGSF L+QIK ATNNF  EN+I E GFGPVY+G+LADG  I VKQLSSKSKQ
Sbjct:   644 ELRGLDLQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQ 703

Query:   127 GNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPE---YAKHGYLTDKAEVCSF 183
             GNRE V EIGMISALQHPNLVKLY  C E  +  +VY   E    A+  + T+K  +   
Sbjct:   704 GNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLD 763

Query:   184 GIVTLEIESGRSNVICRTKED---KFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSD 240
                  ++  G +  +    E+   K    D   + +     LN A  S FG    +   +
Sbjct:   764 WSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLN-AKISDFGLA--KLDEE 820

Query:   241 GNDQCSSSVTPTNRPLM-SFVV-SMLEDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYL 298
              N   S+ +  T   +   + +   L DKA+V SFG+V LEI SG+SN   R KE+  YL
Sbjct:   821 ENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFIYL 880

Query:   299 LDW 301
             LDW
Sbjct:   881 LDW 883

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2203847 RKF1 "receptor-like kinase in flowers 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 294 (108.6 bits), Expect = 1.7e-39, Sum P(3) = 1.7e-39
 Identities = 59/104 (56%), Positives = 78/104 (75%)

Query:    72 DLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREI 131
             +LP+G+F LRQIK AT++F   N+I E GFG V++G+LADG+V+ VKQLSSKS+QGNRE 
Sbjct:   663 ELPSGTFTLRQIKFATDDFNPTNKIGEGGFGAVFKGVLADGRVVAVKQLSSKSRQGNREF 722

Query:   132 VNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLT 175
             +NEIG IS LQHPNLVKL+  C E  +  + Y   EY ++  L+
Sbjct:   723 LNEIGAISCLQHPNLVKLHGFCVERAQLLLAY---EYMENNSLS 763

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006857 "oligopeptide transport" evidence=RCA

GO:0004702 "receptor signaling protein serine/threonine kinase activity" evidence=ISS

TAIR|locus:2009630 AT1G53420 [Arabidopsis thaliana (taxid:3702)]

 Score = 380 (138.8 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
 Identities = 103/244 (42%), Positives = 136/244 (55%)

Query:    67 ELKGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQ 126
             + K L+L   SF LRQIK ATNNF S N I E GFGPVY+G L DG +I VKQLS+ SKQ
Sbjct:   601 DFKSLELMIASFSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTIIAVKQLSTGSKQ 660

Query:   127 GNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPE---YAKHGYLTDKAEVCSF 183
             GNRE +NEIGMISAL HPNLVKLY  C E  +  +VY   E    A+  +   + ++   
Sbjct:   661 GNREFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLARALFGPQETQLRLD 720

Query:   184 GIVTLEIESGRSNVICRTKED---KFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSD 240
                  +I  G +  +    E+   K    D   + +   ++LN    S FG    +   +
Sbjct:   721 WPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLN-PKISDFGLA--KLDEE 777

Query:   241 GNDQCSSSVTPTNRPLM-SFVV-SMLEDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYL 298
              +   S+ +  T   +   + +   L DKA+V SFGIV LEI  GRSN I R+K + FYL
Sbjct:   778 DSTHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGRSNKIERSKNNTFYL 837

Query:   299 LDWV 302
             +DWV
Sbjct:   838 IDWV 841

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2019317 AT1G29730 [Arabidopsis thaliana (taxid:3702)]

 Score = 378 (138.1 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
 Identities = 123/313 (39%), Positives = 164/313 (52%)

Query:    11 KQVIADGNTTFEDDSDA-----AGASKLAPLSRKTYISWLHSESAC--EEILFLKINPVI 63
             K+VI + NTT  D++       AG   +    R  Y S + + S C   E     +   I
Sbjct:   556 KEVIREVNTTVTDNTLEIRLYWAGKGTMIIPQRGYYGSLISAVSVCPSSESECGGMKKKI 615

Query:    64 SSIELKGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSK 123
             S  +LKG DL TGSF LRQ+K ATN+F   N+I E GFG VY+G L DG +I VK+LSSK
Sbjct:   616 S--KLKGPDLRTGSFSLRQLKVATNDFDPLNKIGEGGFGSVYKGRLPDGTLIAVKKLSSK 673

Query:   124 SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSF 183
             S QGN+E VNEIGMI+ LQHPNLVKLY  C E  +  +VY   EY ++  L+D       
Sbjct:   674 SHQGNKEFVNEIGMIACLQHPNLVKLYGCCVEKNQLLLVY---EYLENNCLSDALFA--- 727

Query:   184 GIVTLEIESGRSNVICR--------TKED---KFYLLDWLGSYLKRARKLNGASCSKFGF 232
             G   L++E G  + IC           ED   K    D  G+ +   + LN +  S FG 
Sbjct:   728 GRSCLKLEWGTRHKICLGIARGLAFLHEDSAVKIIHRDIKGTNVLLDKDLN-SKISDFGL 786

Query:   233 KFYRRTSDGNDQCSSSVTPTNRPLM-SFVV-SMLEDKAEVCSFGIVTLEIESGRSNVICR 290
                R   D     ++ V  T   +   + +   L +KA+V SFG+V +EI SG+SN    
Sbjct:   787 A--RLHEDNQSHITTRVAGTIGYMAPEYAMRGHLTEKADVYSFGVVAMEIVSGKSNAKY- 843

Query:   291 TKEDKFY--LLDW 301
             T +D+    LLDW
Sbjct:   844 TPDDECCVGLLDW 856

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2019367 AT1G29740 [Arabidopsis thaliana (taxid:3702)]

 Score = 317 (116.6 bits), Expect = 5.0e-29, Sum P(2) = 5.0e-29
 Identities = 94/240 (39%), Positives = 128/240 (53%)

Query:    76 GSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEI 135
             GSF LRQ+K AT++F   N+I E GFG VY+G L +G +I VK+LSSKS QGN+E +NEI
Sbjct:   663 GSFSLRQLKVATDDFNPLNKIGEGGFGSVYKGRLPNGTLIAVKKLSSKSCQGNKEFINEI 722

Query:   136 GMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRS 195
             G+I+ LQHPNLVKLY  C E  +  +VY   EY ++  L D      FG   L+++    
Sbjct:   723 GIIACLQHPNLVKLYGCCVEKTQLLLVY---EYLENNCLADAL----FGRSGLKLDWRTR 775

Query:   196 NVICR--------TKED---KFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQ 244
             + IC           ED   K    D  G+ +   + LN +  S FG    R   D    
Sbjct:   776 HKICLGIARGLAFLHEDSAVKIIHRDIKGTNILLDKDLN-SKISDFGLA--RLHEDDQSH 832

Query:   245 CSSSVTPTNRPLM-SFVV-SMLEDKAEVCSFGIVTLEIESGRSNV-ICRTKEDKFYLLDW 301
              ++ V  T   +   + +   L +KA+V SFG+V +EI SG+SN       E    LLDW
Sbjct:   833 ITTRVAGTIGYMAPEYAMRGHLTEKADVYSFGVVAMEIVSGKSNANYTPDNECCVGLLDW 892

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2200923 AT1G61550 [Arabidopsis thaliana (taxid:3702)]

 Score = 228 (85.3 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
 Identities = 52/116 (44%), Positives = 73/116 (62%)

Query:    57 LKINPVISSIELKGL---DLPTGS------FHLRQIKAATNNFASENEISERGFGPVYRG 107
             LK N ++S + L+G    DL +        F ++ I+ ATNNF+  N++ + GFGPVY+G
Sbjct:   447 LKHNAIVSKVSLQGAWRNDLKSEDVSGLYFFEMKTIEIATNNFSLVNKLGQGGFGPVYKG 506

Query:   108 LLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVY 163
              L DGK I VK+LSS S QG  E +NEI +IS LQH NLV++   C E  ++ +VY
Sbjct:   507 KLQDGKEIAVKRLSSSSGQGKEEFMNEILLISKLQHINLVRILGCCIEGEERLLVY 562

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2205250 AT1G56130 [Arabidopsis thaliana (taxid:3702)]

 Score = 275 (101.9 bits), Expect = 5.5e-24, Sum P(2) = 5.5e-24
 Identities = 89/248 (35%), Positives = 125/248 (50%)

Query:    67 ELKGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQ 126
             EL G+D+    F   ++K+AT +F   N++ E GFGPVY+G L DG+V+ VK LS  S+Q
Sbjct:   671 ELLGMDVKPYIFTYSELKSATQDFDPSNKLGEGGFGPVYKGNLNDGRVVAVKLLSVGSRQ 730

Query:   127 GNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIV 186
             G  + V EI  IS++ H NLVKLY  C E   + +VY   EY  +G L D+A    FG  
Sbjct:   731 GKGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVY---EYLPNGSL-DQA---LFGDK 783

Query:   187 TLEIE-SGRSNVICRTKEDKFYLLDWLG-SYLKRARKLNGA--------SCSKFGF-KFY 235
             TL ++ S R  +         YL +      + R  K +            S FG  K Y
Sbjct:   784 TLHLDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLY 843

Query:   236 RRTSDGNDQCSSSVTPTNRPLM-SFVV-SMLEDKAEVCSFGIVTLEIESGRSNVICRTKE 293
                 D     S+ V  T   L   + +   L +K +V +FG+V LE+ SGR N     +E
Sbjct:   844 ---DDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEE 900

Query:   294 DKFYLLDW 301
             +K YLL+W
Sbjct:   901 EKKYLLEW 908

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2034344 ASG5 "ALTERED SEED GERMINATION 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 206 (77.6 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
 Identities = 45/100 (45%), Positives = 60/100 (60%)

Query:    77 SFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIG 136
             SF  +++ AAT NF   N + E GFG VY+G L  G+V+ +KQL+    QGNRE + E+ 
Sbjct:    65 SFTFKELAAATRNFREVNLLGEGGFGRVYKGRLDSGQVVAIKQLNPDGLQGNREFIVEVL 124

Query:   137 MISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
             M+S L HPNLV L   CT   ++ +VY   EY   G L D
Sbjct:   125 MLSLLHHPNLVTLIGYCTSGDQRLLVY---EYMPMGSLED 161

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

TAIR|locus:2017923 AT1G16670 [Arabidopsis thaliana (taxid:3702)]

 Score = 260 (96.6 bits), Expect = 2.3e-22, P = 2.3e-22
 Identities = 78/235 (33%), Positives = 122/235 (51%)

Query:    78 FHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGM 137
             +  R+I+ AT++F++EN+I E GFG VY+G L DGK+  +K LS++S+QG +E + EI +
Sbjct:    29 YKYREIRQATDDFSAENKIGEGGFGSVYKGCLKDGKLAAIKVLSAESRQGVKEFLTEINV 88

Query:   138 ISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIE---SGR 194
             IS +QH NLVKLY  C E   + +VY    + ++  L DK  +   G     I+   S R
Sbjct:    89 ISEIQHENLVKLYGCCVEGNHRILVY---NFLENNSL-DKTLLAG-GYTRSGIQFDWSSR 143

Query:   195 SNVICRTKEDKFYLLDWLGSYL-KRARKLNGASCSKF------GFKFYRRTSDGNDQCSS 247
             +N+     +   +L + +  ++  R  K +     K+       F   R         S+
Sbjct:   144 ANICVGVAKGLAFLHEEVRPHIIHRDIKASNILLDKYLSPKISDFGLARLMPPNMTHVST 203

Query:   248 SVTPTNRPLM-SFVV-SMLEDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLD 300
              V  T   L   + V   L  KA++ SFG++ +EI SGRSN   R   +  YLL+
Sbjct:   204 RVAGTIGYLAPEYAVRGQLTRKADIYSFGVLLMEIVSGRSNKNTRLPTEYQYLLE 258

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

TAIR|locus:2205260 AT1G56120 [Arabidopsis thaliana (taxid:3702)]

 Score = 253 (94.1 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
 Identities = 86/254 (33%), Positives = 123/254 (48%)

Query:    61 PVISSIELKGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQL 120
             P     E+  +D+   +F   ++K AT +F   N++ E GFG VY+G L DG+ + VKQL
Sbjct:   681 PYTDDEEILSMDVKPYTFTYSELKNATQDFDLSNKLGEGGFGAVYKGNLNDGREVAVKQL 740

Query:   121 SSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEV 180
             S  S+QG  + V EI  IS++ H NLVKLY  C E   + +VY   EY  +G L D+A  
Sbjct:   741 SIGSRQGKGQFVAEIIAISSVLHRNLVKLYGCCFEGDHRLLVY---EYLPNGSL-DQA-- 794

Query:   181 CSFGIVTLEIE-SGRSNVICRTKEDKFYLLDWLG-SYLKRARKLNGA--------SCSKF 230
               FG  +L ++ S R  +         YL +      + R  K +            S F
Sbjct:   795 -LFGDKSLHLDWSTRYEICLGVARGLVYLHEEASVRIIHRDVKASNILLDSELVPKVSDF 853

Query:   231 GF-KFYRRTSDGNDQCSSSVTPTNRPLM-SFVV-SMLEDKAEVCSFGIVTLEIESGRSNV 287
             G  K Y    D     S+ V  T   L   + +   L +K +V +FG+V LE+ SGR N 
Sbjct:   854 GLAKLY---DDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRKNS 910

Query:   288 ICRTKEDKFYLLDW 301
                 +E K YLL+W
Sbjct:   911 DENLEEGKKYLLEW 924

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	307
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	5e-10
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-08
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-08
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	5e-08
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	7e-07
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	1e-06
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	1e-06
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-06
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	2e-06
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-06
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	5e-06
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	7e-06
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	1e-05
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-05
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	3e-05
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	4e-05
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	5e-05
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	7e-05
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	8e-05
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	8e-05
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	8e-05
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	1e-04
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-04
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	3e-04
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	3e-04
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	4e-04
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	4e-04
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	5e-04
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	5e-04
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	6e-04
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	8e-04
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	0.001
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	0.002
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	0.002
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	0.002
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	0.003
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	0.003
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	0.003
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	0.003
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	0.004
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	0.004
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	0.004
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	0.004

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 58.3 bits (142), Expect = 5e-10
 Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 8/77 (10%)

Query: 101 FGPVYRGLL--ADGKVIEV--KQL-SSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTE 155
           FG VY+G L   DGK  EV  K L    S++  ++ + E  ++  L HPN+V+L  +CTE
Sbjct: 8   FGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTE 67

Query: 156 TLKQPIVYMAPEYAKHG 172
             ++P+ Y+  EY + G
Sbjct: 68  --EEPL-YLVLEYMEGG 81

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 53.7 bits (130), Expect = 2e-08
 Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 13/89 (14%)

Query: 101 FGPVYRGLL---ADGKVIEV--KQL-SSKSKQGNREIVNEIGMISALQHPNLVKLYRLCT 154
           FG VY+G L    DGK +EV  K L    S+Q   E + E  ++  L HPN+VKL  +CT
Sbjct: 12  FGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKLLGVCT 71

Query: 155 ETLKQPIVYMAPEYAKHG----YLTDKAE 179
           E  ++P+  +  EY   G    YL     
Sbjct: 72  E--EEPL-MIVMEYMPGGDLLDYLRKNRP 97

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 53.7 bits (130), Expect = 2e-08
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 13/89 (14%)

Query: 101 FGPVYRGLL---ADGKVIEV--KQL-SSKSKQGNREIVNEIGMISALQHPNLVKLYRLCT 154
           FG VY+G L      K +EV  K L    S+Q   E + E  ++  L HPN+VKL  +CT
Sbjct: 12  FGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVKLLGVCT 71

Query: 155 ETLKQPIVYMAPEYAKHG----YLTDKAE 179
           E  ++P+ Y+  EY + G    YL     
Sbjct: 72  E--EEPL-YIVMEYMEGGDLLSYLRKNRP 97

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 52.5 bits (127), Expect = 5e-08
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 13/89 (14%)

Query: 101 FGPVYRGLL---ADGKVIEV--KQL-SSKSKQGNREIVNEIGMISALQHPNLVKLYRLCT 154
           FG VY+G L    +G   +V  K L    S++   E + E  ++  L HPN+V+L  +CT
Sbjct: 12  FGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRLLGVCT 71

Query: 155 ETLKQPIVYMAPEYAKHG----YLTDKAE 179
           +   +P+ Y+  EY   G    +L    E
Sbjct: 72  Q--GEPL-YIVTEYMPGGDLLDFLRKHGE 97

Length = 258

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 49.1 bits (118), Expect = 7e-07
 Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 8/85 (9%)

Query: 95  EISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYR-- 151
           +I + GFG VY+      GK + +K +  +SK+   +I+NEI ++   +HPN+VK Y   
Sbjct: 7   KIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSY 66

Query: 152 LCTETLKQPIVYMAPEYAKHGYLTD 176
           L  + L     ++  E+   G L D
Sbjct: 67  LKKDEL-----WIVMEFCSGGSLKD 86

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 49.0 bits (117), Expect = 1e-06
 Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 10/87 (11%)

Query: 95  EISERGFGPVYRGLLADGK------VIEVKQLS-SKSKQGNREIVNEIGMISALQHPNLV 147
           E+ E  FG V+ G     +      ++ VK L  + S    ++   E  +++  QH N+V
Sbjct: 12  ELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIV 71

Query: 148 KLYRLCTETLKQPIVYMAPEYAKHGYL 174
           K Y +CTE    PI  M  EY +HG L
Sbjct: 72  KFYGVCTEG-DPPI--MVFEYMEHGDL 95

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 48.6 bits (116), Expect = 1e-06
 Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)

Query: 101 FGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQP 160
           FG V+ GL  +   + VK L   +     + + E  ++  L+HP L++LY +C  TL++P
Sbjct: 19  FGEVWEGLWNNTTPVAVKTLKPGTMDPK-DFLAEAQIMKKLRHPKLIQLYAVC--TLEEP 75

Query: 161 IVYMAPEYAKHGYLTD 176
           I Y+  E  K+G L +
Sbjct: 76  I-YIVTELMKYGSLLE 90

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 48.4 bits (116), Expect = 1e-06
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 9/91 (9%)

Query: 96  ISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYR--L 152
           I E   G VY+    A GK + +K++  + +     I+NEI ++   +HPN+V  Y   L
Sbjct: 27  IGEGASGEVYKATDRATGKEVAIKKMRLRKQNKEL-IINEILIMKDCKHPNIVDYYDSYL 85

Query: 153 CTETLKQPIVYMAPEYAKHGYLTDKAEVCSF 183
             + L     ++  EY   G LTD       
Sbjct: 86  VGDEL-----WVVMEYMDGGSLTDIITQNFV 111

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 48.2 bits (115), Expect = 2e-06
 Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 9/80 (11%)

Query: 101 FGPVYRGL-LADGKVIEVKQLS-----SKSKQGNREIVNEIGMISALQHPNLVKLYRLCT 154
           FG VY GL L DG    VK++S        ++  +++  EI ++S LQHPN+V+     T
Sbjct: 13  FGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLG--T 70

Query: 155 ETLKQPIVYMAPEYAKHGYL 174
           E  +  + Y+  E    G L
Sbjct: 71  EREEDNL-YIFLELVPGGSL 89

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 6/84 (7%)

Query: 94  NEISERGFGPVYRGL-LADGKVIEVKQLS--SKSKQGNREIVNEIGMISALQHPNLVKLY 150
           + I    FG VY+GL L  G  + +KQ+S     ++  + I+ EI ++  L+HPN+VK Y
Sbjct: 6   DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVK-Y 64

Query: 151 RLCTETLKQPIVYMAPEYAKHGYL 174
               ET     +Y+  EYA++G L
Sbjct: 65  IGSIETSDS--LYIILEYAENGSL 86

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 46.7 bits (111), Expect = 5e-06
 Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 3/85 (3%)

Query: 90  FASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKL 149
           F  E ++    FG V+ GL  +   + +K L S      ++   E+  +  L+H +L+ L
Sbjct: 8   FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISL 67

Query: 150 YRLCTETLKQPIVYMAPEYAKHGYL 174
           + +C+    +P VY+  E  + G L
Sbjct: 68  FAVCSVG--EP-VYIITELMEKGSL 89

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 46.2 bits (110), Expect = 7e-06
 Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 5/92 (5%)

Query: 94  NEISERGFGPVYRG--LLADGKVIEV--KQLS-SKSKQGNREIVNEIGMISALQHPNLVK 148
            E+    FG V +G  L+  GK +EV  K L       G +E + E  +++ L HP +V+
Sbjct: 1   KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVR 60

Query: 149 LYRLCTETLKQPIVYMAPEYAKHGYLTDKAEV 180
           L  +C       ++ +AP      YL  + E+
Sbjct: 61  LIGVCKGEPLMLVMELAPLGPLLKYLKKRREI 92

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 45.6 bits (109), Expect = 1e-05
 Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 3/54 (5%)

Query: 100 GFGPVYRGLLAD-GKVIEVKQ--LSSKSKQGNREIVNEIGMISALQHPNLVKLY 150
            FG VY  L  D G+++ VK   LS  S++    +  EI ++S+LQHPN+V+ Y
Sbjct: 12  SFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY 65

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 9/94 (9%)

Query: 94  NEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGN--REIVNEIGMISALQHPNLVKLY 150
           N+I    FG VY  + L  G+++ VK++  +       +EI +E+ ++  L+HPNLVK Y
Sbjct: 6   NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYY 65

Query: 151 RLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFG 184
            +     K   VY+  EY   G L    E+   G
Sbjct: 66  GVEVHREK---VYIFMEYCSGGTL---EELLEHG 93

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 44.2 bits (105), Expect = 3e-05
 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 10/79 (12%)

Query: 101 FGPVYRGLLADGKVIEVKQLSSKSKQGN---REIVNEIGMISALQHPNLVKLYRLCTETL 157
           FG V+ G       + VK L    K G       + E  ++  L+H  LV+LY +C+E  
Sbjct: 19  FGEVWMGTWNGTTKVAVKTL----KPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEE- 73

Query: 158 KQPIVYMAPEYAKHGYLTD 176
            +PI Y+  EY   G L D
Sbjct: 74  -EPI-YIVTEYMSKGSLLD 90

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 43.7 bits (104), Expect = 4e-05
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 5/79 (6%)

Query: 100 GFGPVYRGL-LADGKVIEVKQLSSKSKQGNRE-IVNEIGMISALQHPNLVKLYRLCTETL 157
            FG VY       GK++ +K +  K  + +RE I+ EI ++  L+HPN+V+LY +  +  
Sbjct: 11  SFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFED-- 68

Query: 158 KQPIVYMAPEYAKHGYLTD 176
            +  +Y+  EY + G L D
Sbjct: 69  -EDKLYLVMEYCEGGDLFD 86

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 43.4 bits (103), Expect = 5e-05
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 5/79 (6%)

Query: 100 GFGPVYRGL-LADGKVIEVKQLSSKSKQGNRE-IVNEIGMISALQHPNLVKLYRLCTETL 157
           GFG VY       GK + +K +  +      E ++ EI ++  L HPN+VKLY +  +  
Sbjct: 5   GFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFED-- 62

Query: 158 KQPIVYMAPEYAKHGYLTD 176
            +  +Y+  EY + G L D
Sbjct: 63  -ENHLYLVMEYCEGGSLKD 80

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 43.3 bits (102), Expect = 7e-05
 Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 11/79 (13%)

Query: 101 FGPVYRGLLADGKVIEVKQLSSKSKQGNREI---VNEIGMISALQHPNLVKLYRLCTETL 157
           FG V+ G       + +K L    KQG+      + E  ++  LQHP LV+LY + T   
Sbjct: 19  FGEVWMGYYNGHTKVAIKSL----KQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT--- 71

Query: 158 KQPIVYMAPEYAKHGYLTD 176
           ++PI Y+  EY ++G L D
Sbjct: 72  QEPI-YIITEYMENGSLVD 89

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 43.1 bits (101), Expect = 8e-05
 Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 90  FASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGN---REIVNEIGMISALQHPN 145
           F+   EI    FG VY    + + +V+ +K++S   KQ N   ++I+ E+  +  L+HPN
Sbjct: 17  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76

Query: 146 LVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES 192
            ++ YR C   L++   ++  EY   G  +D  EV    +  +EI +
Sbjct: 77  TIQ-YRGC--YLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAA 119

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 43.1 bits (101), Expect = 8e-05
 Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 9/93 (9%)

Query: 88  NNFASENEISERGFGPVYRGLL------ADGKVIEVKQLSSKSKQGNREIVNEIGMISAL 141
           +N   + E+ E  FG V+           D  ++ VK L   S    ++   E  +++ L
Sbjct: 5   HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 64

Query: 142 QHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYL 174
           QH ++VK Y +C E    P++ M  EY KHG L
Sbjct: 65  QHEHIVKFYGVCVE--GDPLI-MVFEYMKHGDL 94

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 43.1 bits (101), Expect = 8e-05
 Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 9/86 (10%)

Query: 95  EISERGFGPVYRGLLA------DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVK 148
           E+ E  FG V+           D  ++ VK L   S+   ++   E  +++ LQH ++V+
Sbjct: 12  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVR 71

Query: 149 LYRLCTETLKQPIVYMAPEYAKHGYL 174
            Y +CTE   +P++ M  EY +HG L
Sbjct: 72  FYGVCTE--GRPLL-MVFEYMRHGDL 94

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 7/88 (7%)

Query: 90  FASENEISERGFGPVYRGLL---ADGKVIEVKQLSSKSKQG---NREIVNEIGMISALQH 143
           +  E  I    +G VY+       DGK   +K+     +Q    ++    EI ++  L+H
Sbjct: 2   YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKH 61

Query: 144 PNLVKLYRLCTETLKQPIVYMAPEYAKH 171
            N+V L  +  E   +  VY+  +YA+H
Sbjct: 62  ENVVSLVEVFLEHADKS-VYLLFDYAEH 88

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 6/80 (7%)

Query: 100 GFGPVYRG-LLADGKVIEVKQL--SSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTET 156
            FG VY+      GK++ VK L   S+  + ++    EI ++  L HPN+V+L     + 
Sbjct: 11  SFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDAFED- 69

Query: 157 LKQPIVYMAPEYAKHGYLTD 176
             +  +Y+  EY + G L D
Sbjct: 70  --KDHLYLVMEYCEGGDLFD 87

Length = 260

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 41.4 bits (98), Expect = 3e-04
 Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 6/87 (6%)

Query: 89  NFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREI--VNEIGMISALQHPN 145
            +   N I E  +G VYR      G+++ +K+L  + ++    I  + EI ++  LQHPN
Sbjct: 6   EYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPN 65

Query: 146 LVKLYRLCT-ETLKQPIVYMAPEYAKH 171
           +V +  +     L +  +YM  EY +H
Sbjct: 66  IVTVKEVVVGSNLDK--IYMVMEYVEH 90

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 41.1 bits (96), Expect = 3e-04
 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 95  EISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCT 154
           EI    FG V+ G   + + + +K +  +      + + E  ++  L HP LV+LY +CT
Sbjct: 11  EIGSGQFGLVWLGYWLEKRKVAIKTIR-EGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCT 69

Query: 155 ETLKQPIVYMAPEYAKHGYLTD 176
           E  + PI  +  E+ +HG L+D
Sbjct: 70  E--RSPI-CLVFEFMEHGCLSD 88

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 41.0 bits (97), Expect = 4e-04
 Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 94  NEISERGFGPVYRGL-LADGKVIEVKQLSSKS-KQG-NREIVNEIGMISALQHPNLVKLY 150
            +I E  +G VY+      G+++ +K++  ++ K+G     + EI ++  L+HPN+V+L 
Sbjct: 5   AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLK 64

Query: 151 RLCTETLKQPIVYMAPEYAKH 171
            + T   K   +YM  EY  H
Sbjct: 65  EIVTSKGK-GSIYMVFEYMDH 84

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 5/81 (6%)

Query: 96  ISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTE 155
           I +  FG V  G     KV  VK L   S       + E  +++ L+HPNLV+L  +  +
Sbjct: 14  IGKGEFGDVMLGDYRGQKV-AVKCLKDDSTAAQ-AFLAEASVMTTLRHPNLVQLLGVVLQ 71

Query: 156 TLKQPIVYMAPEYAKHGYLTD 176
               P+ Y+  EY   G L D
Sbjct: 72  --GNPL-YIVTEYMAKGSLVD 89

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 40.5 bits (95), Expect = 5e-04
 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 95  EISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCT 154
           E+    FG V+ G       + +K +   +     + + E  ++  L HPNLV+LY +CT
Sbjct: 11  ELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCT 69

Query: 155 ETLKQPIVYMAPEYAKHGYLTD 176
           +  ++PI ++  EY  +G L +
Sbjct: 70  K--QRPI-FIVTEYMANGCLLN 88

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 40.5 bits (95), Expect = 5e-04
 Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 10/87 (11%)

Query: 95  EISERGFGPVYRG---LLADGK---VIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLV 147
           E+ E  FG VY+G      +      + +K L      +  +E   E  ++S LQHPN+V
Sbjct: 12  ELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIV 71

Query: 148 KLYRLCTETLKQPIVYMAPEYAKHGYL 174
            L  +CT+  +QP   M  EY  HG L
Sbjct: 72  CLLGVCTK--EQP-TCMLFEYLAHGDL 95

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 40.5 bits (95), Expect = 6e-04
 Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 10/71 (14%)

Query: 87  TNNFASENEISERGFGPVYRGL-LADGKVIEVKQ------LSSKSKQGNREIVNEIGMIS 139
             NF  E +I +  F  VY+ + L DG+V+ +K+      + +K++Q   + + EI ++ 
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQ---DCLKEIDLLK 57

Query: 140 ALQHPNLVKLY 150
            L HPN++K  
Sbjct: 58  QLDHPNVIKYL 68

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 39.8 bits (93), Expect = 8e-04
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 5/77 (6%)

Query: 101 FGPVYRGLLAD-GKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ 159
           +G VY G+       + VK L   + +   E + E  ++  ++HPNLV+L  +CT   ++
Sbjct: 19  YGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT---RE 74

Query: 160 PIVYMAPEYAKHGYLTD 176
           P  Y+  E+  +G L D
Sbjct: 75  PPFYIITEFMTYGNLLD 91

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 39.6 bits (92), Expect = 0.001
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 8/95 (8%)

Query: 90  FASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGN---REIVNEIGMISALQHPN 145
           F   +EI    FG VY    +   +V+ VK++S   KQ N   ++I+ E+  +  L+HPN
Sbjct: 23  FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPN 82

Query: 146 LVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEV 180
            ++ Y+ C   LK+   ++  EY   G  +D  EV
Sbjct: 83  TIE-YKGC--YLKEHTAWLVMEYCL-GSASDLLEV 113

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 38.9 bits (90), Expect = 0.002
 Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 10/87 (11%)

Query: 95  EISERGFGPVYRGLL---ADG---KVIEVKQLSSKSKQGNRE-IVNEIGMISALQHPNLV 147
           E+ E  FG VY+G L   A G   + + +K L  K++   RE   +E  M S LQHPN+V
Sbjct: 12  ELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIV 71

Query: 148 KLYRLCTETLKQPIVYMAPEYAKHGYL 174
            L  L   T +QP+  M   Y  H  L
Sbjct: 72  CL--LGVVTKEQPLS-MIFSYCSHSDL 95

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 38.8 bits (90), Expect = 0.002
 Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 2/82 (2%)

Query: 115 IEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYL 174
           +E K+L  +       +V+E G ++ +    L ++  +  +  K P+ + APE  KH   
Sbjct: 116 LESKKLVHRDLAARNILVSEDG-VAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKF 174

Query: 175 TDKAEVCSFGIVTLEIES-GRS 195
           + K++V S+G++  E+ S GR+
Sbjct: 175 SSKSDVWSYGVLLWEVFSYGRA 196

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 4/77 (5%)

Query: 101 FGPVYRGLLADGKVIEVKQLSSKSKQGNRE-IVNEIGMISALQHPNLVKLYRLCTETLKQ 159
           FG VY+G+L     + VK   S      +   + E  ++    HPN+VKL  +C +  KQ
Sbjct: 8   FGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQ--KQ 65

Query: 160 PIVYMAPEYAKHGYLTD 176
           PI Y+  E    G L  
Sbjct: 66  PI-YIVMELVPGGSLLT 81

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 38.1 bits (89), Expect = 0.003
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query: 146 LVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GR 194
           L K      ++ K P+ + APE  +    + K++V SFGI+  EI S GR
Sbjct: 148 LAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 197

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 38.4 bits (89), Expect = 0.003
 Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 9/88 (10%)

Query: 93  ENEISERGFGPVYRGL------LADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNL 146
           + E+ E  FG V+           D  ++ VK L   +    ++   E  +++ LQH ++
Sbjct: 10  KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 69

Query: 147 VKLYRLCTETLKQPIVYMAPEYAKHGYL 174
           VK Y +C +    P++ M  EY KHG L
Sbjct: 70  VKFYGVCGD--GDPLI-MVFEYMKHGDL 94

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 38.5 bits (90), Expect = 0.003
 Identities = 15/31 (48%), Positives = 21/31 (67%)

Query: 160 PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEI 190
           P+ +MAPE  K G  T K++V SFG+V  E+
Sbjct: 184 PVRWMAPESLKDGVFTTKSDVWSFGVVLWEM 214

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 38.0 bits (88), Expect = 0.003
 Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 10/86 (11%)

Query: 96  ISERGFGPVYRGL------LADGKVIEVKQLSSKSKQGN-REIVNEIGMISALQHPNLVK 148
           + E  FG V +         A    + VK L   +     R++++E  ++  + HP+++K
Sbjct: 8   LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIK 67

Query: 149 LYRLCTETLKQPIVYMAPEYAKHGYL 174
           LY  C++    P+  +  EYAK+G L
Sbjct: 68  LYGACSQD--GPL-LLIVEYAKYGSL 90

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 37.9 bits (88), Expect = 0.004
 Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 6/91 (6%)

Query: 89  NFASENEISERGFGPVYRGLL-ADGKVIEVKQ--LSSKSKQGNREIVNEIGMISALQHPN 145
           +F   N+I +  FG V++ +  AD +V  +KQ  LS  +++   E ++E  +++ L    
Sbjct: 1   DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSY 60

Query: 146 LVKLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
           +++ Y    +  K  IV    EYA++G L  
Sbjct: 61  IIRYYESFLDKGKLNIVM---EYAENGDLHK 88

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 37.8 bits (88), Expect = 0.004
 Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 6/59 (10%)

Query: 101 FGPVYRGL---LADGKVIEV--KQL-SSKSKQGNREIVNEIGMISALQHPNLVKLYRLC 153
           FG VY+G+     +   I V  K L    S + N+EI++E  +++++ HP++V+L  +C
Sbjct: 20  FGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGIC 78

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 37.9 bits (88), Expect = 0.004
 Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 8/105 (7%)

Query: 90  FASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGN---REIVNEIGMISALQHPN 145
           F    EI    FG VY    +   +V+ +K++S   KQ N   ++I+ E+  +  L+HPN
Sbjct: 17  FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPN 76

Query: 146 LVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEI 190
            ++ Y+ C   L++   ++  EY   G  +D  EV    +  +EI
Sbjct: 77  TIE-YKGC--YLREHTAWLVMEYCL-GSASDILEVHKKPLQEVEI 117

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 38.1 bits (88), Expect = 0.004
 Identities = 20/72 (27%), Positives = 45/72 (62%), Gaps = 6/72 (8%)

Query: 101 FGPVYRGL-LADGKVIEV----KQL-SSKSKQGNREIVNEIGMISALQHPNLVKLYRLCT 154
           FG VY+GL + +G+ +++    K+L  + S + N+EI++E  +++++ +P++ +L  +C 
Sbjct: 20  FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 79

Query: 155 ETLKQPIVYMAP 166
            +  Q I  + P
Sbjct: 80  TSTVQLITQLMP 91

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	307
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.96
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.95
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.95
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.94
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.94
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.94
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.94
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.94
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.93
PHA02988	283	hypothetical protein; Provisional	99.93
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.92
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.92
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.91
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.91
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.91
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.91
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.91
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.91
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.91
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.91
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.91
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.91
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.91
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.91
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.91
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.91
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.9
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.9
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.9
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.9
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.9
KOG0578	550	consensus p21-activated serine/threonine protein k	99.9
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.9
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.9
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.9
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.9
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.9
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.9
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.9
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.9
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.9
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.9
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.9
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.9
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.89
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.89
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.89
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.89
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.89
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.89
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.89
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.89
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.89
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.89
KOG0198	313	consensus MEKK and related serine/threonine protei	99.89
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.89
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.89
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.89
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.89
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.89
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.89
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.89
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.89
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.89
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.89
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.89
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.89
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.89
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.89
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.89
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.89
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.89
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.89
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.89
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.89
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.89
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.89
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.89
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.89
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.89
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.89
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.88
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.88
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.88
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.88
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.88
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.88
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.88
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.88
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.88
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.88
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.88
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.88
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.88
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.88
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.88
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.88
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.88
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.88
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.88
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.88
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.88
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.88
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.88
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.88
PTZ00283	496	serine/threonine protein kinase; Provisional	99.88
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.88
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.88
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.88
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.88
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.88
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.88
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.88
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.88
PHA03212	391	serine/threonine kinase US3; Provisional	99.88
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.88
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.88
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.88
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.88
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.88
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.88
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.87
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.87
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.87
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.87
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.87
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.87
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.87
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.87
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.87
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.87
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.87
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.87
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.87
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.87
PTZ00267	478	NIMA-related protein kinase; Provisional	99.87
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.87
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.87
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.87
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.87
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.87
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.87
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.87
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.87
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.87
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.87
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.87
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.87
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.87
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.87
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.87
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.87
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.87
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.87
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.87
PTZ00036	440	glycogen synthase kinase; Provisional	99.87
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.87
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.87
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.87
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.87
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.87
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.86
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.86
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.86
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.86
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.86
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.86
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.86
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.86
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.86
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.86
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.86
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.86
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.86
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.86
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.86
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.86
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.86
PHA03209	357	serine/threonine kinase US3; Provisional	99.86
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.86
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.86
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.86
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.86
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.86
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.86
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.86
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.86
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.86
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.86
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.86
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.86
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.86
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.86
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.86
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.86
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.86
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.86
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.86
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.86
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.86
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.86
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.86
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.86
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.86
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.86
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.86
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.86
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.85
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.85
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.85
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.85
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.85
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.85
PTZ00284	467	protein kinase; Provisional	99.85
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.85
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.85
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.85
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.85
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.85
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.85
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.85
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.85
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.85
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.85
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.85
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.85
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.85
PHA03207	392	serine/threonine kinase US3; Provisional	99.85
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.85
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.85
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.85
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.85
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.85
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.85
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.85
KOG0605	550	consensus NDR and related serine/threonine kinases	99.85
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.85
PHA03211	461	serine/threonine kinase US3; Provisional	99.85
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.85
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.85
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.84
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.84
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.84
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.84
KOG0589	426	consensus Serine/threonine protein kinase [General	99.84
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.84
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.84
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.84
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.84
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.84
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.84
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.84
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.84
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.84
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.84
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.84
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.84
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.84
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.84
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.84
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.84
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.84
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.84
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.84
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.84
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.84
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.84
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.84
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.84
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.84
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.84
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.83
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.83
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.83
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.83
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.83
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.83
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.83
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.83
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.83
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.83
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.83
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.83
KOG3653	534	consensus Transforming growth factor beta/activin	99.83
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.83
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.83
PLN00009	294	cyclin-dependent kinase A; Provisional	99.83
PHA02882	294	putative serine/threonine kinase; Provisional	99.83
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.83
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.83
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.83
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.83
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.82
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.82
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.82
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.82
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.82
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.82
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.82
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.82
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.82
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.82
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.82
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.82
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.82
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.82
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.82
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.82
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.82
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.82
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.82
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.82
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.82
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.82
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.82
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.82
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.82
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.82
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.82
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.82
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.82
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.82
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.81
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.81
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.81
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.81
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.81
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.81
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.81
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.81
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.81
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.81
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.81
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.8
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.8
KOG0584	632	consensus Serine/threonine protein kinase [General	99.8
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.8
PHA03210	501	serine/threonine kinase US3; Provisional	99.8
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.8
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.8
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.8
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.8
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.79
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.79
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.79
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.79
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.79
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.79
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.79
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.79
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.79
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.79
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.79
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.78
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.78
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.78
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.77
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.77
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.77
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.76
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.76
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.74
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.73
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.73
KOG0586	596	consensus Serine/threonine protein kinase [General	99.72
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.72
KOG0610	459	consensus Putative serine/threonine protein kinase	99.72
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.72
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.71
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.71
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.71
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.71
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.68
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.67
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.67
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.66
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.63
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.62
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.62
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.6
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.6
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.6
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.6
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.6
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.58
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.58
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.58
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.58
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.58
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.57
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.56
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.53
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.51
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.49
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.49
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.49
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.46
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.44
KOG1152	772	consensus Signal transduction serine/threonine kin	99.42
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.36
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.32
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.29
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.16
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.15
PLN00181	793	protein SPA1-RELATED; Provisional	99.12
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.1
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	98.91
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	98.83
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.63
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.62
PRK09188	365	serine/threonine protein kinase; Provisional	98.55
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.54
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.51
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.51
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	98.45
PRK10345	210	hypothetical protein; Provisional	98.21
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	98.09
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	98.01
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	97.99
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	97.96
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	97.91
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	97.76
PRK14879	211	serine/threonine protein kinase; Provisional	97.46
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	97.27
PRK09605	535	bifunctional UGMP family protein/serine/threonine	97.24
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	97.22
KOG1266	458	consensus Protein kinase [Signal transduction mech	97.15
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	97.12
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	97.06
smart00090	237	RIO RIO-like kinase.	96.97
KOG0590	601	consensus Checkpoint kinase and related serine/thr	96.93
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	96.87
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	96.76
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	96.46
KOG1187	361	consensus Serine/threonine protein kinase [Signal	96.34
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	96.25
PRK12274	218	serine/threonine protein kinase; Provisional	96.09
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	95.62
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	95.35
KOG1243	690	consensus Protein kinase [General function predict	95.02
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	94.84
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	94.09
KOG0606	1205	consensus Microtubule-associated serine/threonine	93.42
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	93.12
COG4248	637	Uncharacterized protein with protein kinase and he	93.1
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	92.73
KOG2137	700	consensus Protein kinase [Signal transduction mech	92.63
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	92.16
KOG0576	829	consensus Mitogen-activated protein kinase kinase	89.27
KOG1093	725	consensus Predicted protein kinase (contains TBC a	89.23
COG0661	517	AarF Predicted unusual protein kinase [General fun	88.0
PRK10593	297	hypothetical protein; Provisional	84.57
PLN02876	822	acyl-CoA dehydrogenase	83.3
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	82.89
PF01636	239	APH: Phosphotransferase enzyme family This family	81.88
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	81.66
KOG1235	538	consensus Predicted unusual protein kinase [Genera	81.61
KOG4721	904	consensus Serine/threonine protein kinase, contain	81.22
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	80.47
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	80.16

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.8e-36  Score=274.87  Aligned_cols=194  Identities=40%  Similarity=0.658  Sum_probs=169.3

Q ss_pred             CCCcccHHHHHHHhcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeee
Q 045092           74 PTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLC  153 (307)
Q Consensus        74 ~~~~~~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~  153 (307)
                      ..+.|++.||..||++|+..+.||+|+||.||+|.+.+|+.||||++.....+..++|.+|+.++.+++|+|+|+|+|||
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            45779999999999999999999999999999999998899999988765443145699999999999999999999999


Q ss_pred             ecCCC---------------------------------------------------------------------------
Q 045092          154 TETLK---------------------------------------------------------------------------  158 (307)
Q Consensus       154 ~~~~~---------------------------------------------------------------------------  158 (307)
                      .+...                                                                           
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD  220 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD  220 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence            86532                                                                           


Q ss_pred             -------------------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhh
Q 045092          159 -------------------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRA  219 (307)
Q Consensus       159 -------------------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~  219 (307)
                                         +|.+|+||||+..|.++.|+|||||||+|+||+||+.|.+...+.....+.+|++..+.++
T Consensus       221 FGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~  300 (361)
T KOG1187|consen  221 FGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEG  300 (361)
T ss_pred             ccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCc
Confidence                               1447999999999999999999999999999999999998665556667999999999998


Q ss_pred             hhhcccccCCCc-hhhH-----HHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          220 RKLNGASCSKFG-FKFY-----RRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       220 ~~~~~~~~~~l~-~~~~-----~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                      . +.+++|+.+. ..+.     .++..+++.|+ +.+|..||+|.||+++|+.+..
T Consensus       301 ~-~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~-~~~~~~RP~m~~Vv~~L~~~~~  354 (361)
T KOG1187|consen  301 K-LREIVDPRLKEGEYPDEKEVKKLAELALRCL-RPDPKERPTMSQVVKELEGILS  354 (361)
T ss_pred             c-hhheeCCCccCCCCChHHHHHHHHHHHHHHc-CcCCCcCcCHHHHHHHHHhhcc
Confidence            6 9999999986 4433     26889999999 9999999999999999965443

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.96  E-value=2.1e-30  Score=249.06  Aligned_cols=170  Identities=26%  Similarity=0.403  Sum_probs=139.7

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEEc------CCCEEEEEEccCCChh-cHHHHHHHHHHHhhCCCCCccceeeeeecCCC
Q 045092           86 ATNNFASENEISERGFGPVYRGLLA------DGKVIEVKQLSSKSKQ-GNREIVNEIGMISALQHPNLVKLYRLCTETLK  158 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  158 (307)
                      .+.+....+.||+|+||+||+|+..      +...||||.++..... ...+|.+|++++..++|+|||+|+|.|.++..
T Consensus       484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P  563 (774)
T KOG1026|consen  484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDP  563 (774)
T ss_pred             chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe
Confidence            3455566789999999999999942      3467999999977555 67799999999999999999999999987632


Q ss_pred             C-------------------------------------------------------------------------------
Q 045092          159 Q-------------------------------------------------------------------------------  159 (307)
Q Consensus       159 ~-------------------------------------------------------------------------------  159 (307)
                      .                                                                               
T Consensus       564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VK  643 (774)
T KOG1026|consen  564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVK  643 (774)
T ss_pred             eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEE
Confidence            1                                                                               


Q ss_pred             ------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHH
Q 045092          160 ------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGS  214 (307)
Q Consensus       160 ------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~  214 (307)
                                              ++.||+||.+..|+|+++||||||||+|||+++ |+.|+.....++       +..
T Consensus       644 IsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E-------VIe  716 (774)
T KOG1026|consen  644 ISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE-------VIE  716 (774)
T ss_pred             ecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH-------HHH
Confidence                                    788999999999999999999999999999999 999997655433       233


Q ss_pred             HHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          215 YLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       215 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                      .+..++ +     -.-+..++.++.+|++.|| +.+|.+||+++||-..|+....
T Consensus       717 ~i~~g~-l-----L~~Pe~CP~~vY~LM~~CW-~~~P~~RPsF~eI~~~L~~~~~  764 (774)
T KOG1026|consen  717 CIRAGQ-L-----LSCPENCPTEVYSLMLECW-NENPKRRPSFKEIHSRLQAWAQ  764 (774)
T ss_pred             HHHcCC-c-----ccCCCCCCHHHHHHHHHHh-hcCcccCCCHHHHHHHHHHHHh
Confidence            333333 1     2235678889999999999 9999999999999998887543

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.95  E-value=3.5e-28  Score=222.45  Aligned_cols=164  Identities=27%  Similarity=0.401  Sum_probs=132.0

Q ss_pred             CCcccCCCCeeEEEEEEcCCCEEEEEEccCCChh--cHHHHHHHHHHHhhCCCCCccceeeeeecCCC-C----------
Q 045092           93 ENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQ--GNREIVNEIGMISALQHPNLVKLYRLCTETLK-Q----------  159 (307)
Q Consensus        93 ~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-~----------  159 (307)
                      ...||+|+||+||+|.+.....||||++......  ..+.|.+|+.+|.+++|||||+++|+|.++.. .          
T Consensus        46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~G  125 (362)
T KOG0192|consen   46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGG  125 (362)
T ss_pred             hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCC
Confidence            4569999999999999964444999999754322  25689999999999999999999999988631 1          


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       126 sL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~  205 (362)
T KOG0192|consen  126 SLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTSVA  205 (362)
T ss_pred             cHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccccccCCC
Confidence                                                                                            


Q ss_pred             -Cccccchhhhc--cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 -PIVYMAPEYAK--HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 -t~~y~aPE~~~--~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                       |+.|||||.+.  ...|+.|+|||||||++|||+||+.||.....      ...+...      ......|.++..++.
T Consensus       206 GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~------~~~~~~v------~~~~~Rp~~p~~~~~  273 (362)
T KOG0192|consen  206 GTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP------VQVASAV------VVGGLRPPIPKECPP  273 (362)
T ss_pred             CCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH------HHHHHHH------HhcCCCCCCCccCCH
Confidence             78899999999  56899999999999999999999999964332      1111111      233445566666888


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                      .+..++..|| ..||..||++.+++..|+....
T Consensus       274 ~l~~l~~~CW-~~dp~~RP~f~ei~~~l~~~~~  305 (362)
T KOG0192|consen  274 HLSSLMERCW-LVDPSRRPSFLEIVSRLESIMS  305 (362)
T ss_pred             HHHHHHHHhC-CCCCCcCCCHHHHHHHHHHHHH
Confidence            9999999999 9999999999999999986543

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.95  E-value=2e-28  Score=225.05  Aligned_cols=163  Identities=25%  Similarity=0.354  Sum_probs=132.6

Q ss_pred             ccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----------
Q 045092           91 ASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----------  159 (307)
Q Consensus        91 ~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----------  159 (307)
                      ...+.||+|-||.|+.|.++....||||.++.. ....+.|.+|+++|++|+|+|||+|+|+|......           
T Consensus       209 ~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~Gs  287 (468)
T KOG0197|consen  209 KLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGS  287 (468)
T ss_pred             HHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCc
Confidence            345889999999999999987779999999765 33457899999999999999999999999875211           


Q ss_pred             -------------------------------------------------------------------------------C
Q 045092          160 -------------------------------------------------------------------------------P  160 (307)
Q Consensus       160 -------------------------------------------------------------------------------t  160 (307)
                                                                                                     +
T Consensus       288 Ll~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfP  367 (468)
T KOG0197|consen  288 LLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFP  367 (468)
T ss_pred             HHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCC
Confidence                                                                                           7


Q ss_pred             ccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHH
Q 045092          161 IVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTS  239 (307)
Q Consensus       161 ~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  239 (307)
                      +.|.|||.+..+.|+.|||||||||+||||+| |+.|+.....      .+ +...+..|.   .+   .-|..|+..+.
T Consensus       368 IkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn------~e-v~~~le~Gy---Rl---p~P~~CP~~vY  434 (468)
T KOG0197|consen  368 IKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN------EE-VLELLERGY---RL---PRPEGCPDEVY  434 (468)
T ss_pred             ceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH------HH-HHHHHhccC---cC---CCCCCCCHHHH
Confidence            88999999999999999999999999999999 8999853332      22 223333332   12   22356888999


Q ss_pred             HHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          240 DGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       240 ~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      +++..|| +.+|++|||++.+...|++..
T Consensus       435 ~lM~~CW-~~~P~~RPtF~~L~~~l~~~~  462 (468)
T KOG0197|consen  435 ELMKSCW-HEDPEDRPTFETLREVLEDFF  462 (468)
T ss_pred             HHHHHHh-hCCcccCCCHHHHHHHHHHhh
Confidence            9999999 999999999999888887653

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.94  E-value=6.5e-26  Score=200.35  Aligned_cols=170  Identities=18%  Similarity=0.256  Sum_probs=137.9

Q ss_pred             cccHHHHHHHhcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeee
Q 045092           77 SFHLRQIKAATNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCT  154 (307)
Q Consensus        77 ~~~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~  154 (307)
                      .+++.||+.       .+.||+|..|+||++.+. +++.+|+|.+... .....+++.+|++++...+||+||++||.|.
T Consensus        75 ~i~~~dle~-------~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~  147 (364)
T KOG0581|consen   75 GISLSDLER-------LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFY  147 (364)
T ss_pred             ccCHHHhhh-------hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEE
Confidence            356666654       589999999999999965 7899999999644 3445678999999999999999999999998


Q ss_pred             cCCC-C--------------------------------------------------------------------------
Q 045092          155 ETLK-Q--------------------------------------------------------------------------  159 (307)
Q Consensus       155 ~~~~-~--------------------------------------------------------------------------  159 (307)
                      .... .                                                                          
T Consensus       148 ~~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~  227 (364)
T KOG0581|consen  148 SNGEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSG  227 (364)
T ss_pred             eCCceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccH
Confidence            7653 1                                                                          


Q ss_pred             ------------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhccccc
Q 045092          160 ------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC  227 (307)
Q Consensus       160 ------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  227 (307)
                                  |..|||||-+.++.|+.++||||||++++|+++|+.|+.... .......+.+..       +..-..
T Consensus       228 ~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~-~~~~~~~~Ll~~-------Iv~~pp  299 (364)
T KOG0581|consen  228 ILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPN-PPYLDIFELLCA-------IVDEPP  299 (364)
T ss_pred             HhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcC-CCCCCHHHHHHH-------HhcCCC
Confidence                        889999999999999999999999999999999999996431 112222332222       344445


Q ss_pred             CCCchh-hHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          228 SKFGFK-FYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       228 ~~l~~~-~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      |.++.. ++.++..++..|+ +.||.+||++.|+++
T Consensus       300 P~lP~~~fS~ef~~FV~~CL-~Kdp~~R~s~~qLl~  334 (364)
T KOG0581|consen  300 PRLPEGEFSPEFRSFVSCCL-RKDPSERPSAKQLLQ  334 (364)
T ss_pred             CCCCcccCCHHHHHHHHHHh-cCCcccCCCHHHHhc
Confidence            777775 8889999999999 999999999999875

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.94  E-value=1.3e-26  Score=230.01  Aligned_cols=168  Identities=27%  Similarity=0.389  Sum_probs=133.7

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc--CCC----EEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC
Q 045092           87 TNNFASENEISERGFGPVYRGLLA--DGK----VIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~--~~~----~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  159 (307)
                      ..+....+.||+|+||.||.|.+.  .+.    .||||.++.. +.+...+|++|+.+|++++|||||+++|.|.+....
T Consensus       691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~  770 (1025)
T KOG1095|consen  691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP  770 (1025)
T ss_pred             hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence            344566789999999999999954  333    4999999865 556678999999999999999999999999875221


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlAr  850 (1025)
T KOG1095|consen  771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLAR  850 (1025)
T ss_pred             EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhH
Confidence                                                                                            


Q ss_pred             ----------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhh
Q 045092          160 ----------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKL  222 (307)
Q Consensus       160 ----------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  222 (307)
                                      +..|||||.+..+.|+.|+|||||||+|||++| |..||......+      .+......++  
T Consensus       851 Diy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~------v~~~~~~ggR--  922 (1025)
T KOG1095|consen  851 DIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE------VLLDVLEGGR--  922 (1025)
T ss_pred             hhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH------HHHHHHhCCc--
Confidence                            678999999999999999999999999999999 999995443222      1122222221  


Q ss_pred             cccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          223 NGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       223 ~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                           -..+..|+..+.+++..|| +.+|++||++..|++.+..+.
T Consensus       923 -----L~~P~~CP~~ly~lM~~CW-~~~pe~RP~F~~i~~q~~~i~  962 (1025)
T KOG1095|consen  923 -----LDPPSYCPEKLYQLMLQCW-KHDPEDRPSFRTIVEQDPAIS  962 (1025)
T ss_pred             -----cCCCCCCChHHHHHHHHHc-cCChhhCccHHHHHhhhhhhh
Confidence                 2224567889999999999 999999999999999777654

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.94  E-value=2.5e-26  Score=213.82  Aligned_cols=161  Identities=20%  Similarity=0.319  Sum_probs=129.3

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      ..|...++||+|||+.||.++. .+|..||+|++.+.   .....+.+.+||++.+.|+|||||+++++|.+...-    
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            4588899999999999999995 89999999999753   233456789999999999999999999999886211    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~T  177 (592)
T KOG0575|consen   98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKT  177 (592)
T ss_pred             EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcccccce
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 ---PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 ---t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                         ||.|+|||++.....+..+||||+||++|.|+.|++||+...-      .+ ....++..       +-.+|.....
T Consensus       178 lCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~v------ke-ty~~Ik~~-------~Y~~P~~ls~  243 (592)
T KOG0575|consen  178 LCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTV------KE-TYNKIKLN-------EYSMPSHLSA  243 (592)
T ss_pred             ecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchH------HH-HHHHHHhc-------CcccccccCH
Confidence               9999999999988899999999999999999999999963221      11 11222211       1223334555


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      +..+++...+ +.||.+||++++|+..
T Consensus       244 ~A~dLI~~lL-~~~P~~Rpsl~~vL~h  269 (592)
T KOG0575|consen  244 EAKDLIRKLL-RPNPSERPSLDEVLDH  269 (592)
T ss_pred             HHHHHHHHHh-cCCcccCCCHHHHhcC
Confidence            7888899999 9999999999999863

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=1.4e-26  Score=208.04  Aligned_cols=160  Identities=21%  Similarity=0.339  Sum_probs=134.3

Q ss_pred             CcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           89 NFASENEISERGFGPVYRGL-LADGKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      -|...++||+|.||.||+|. ..+++.||+|++... .....++..+|+.+|.+++++||.++||.+..+...       
T Consensus        14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~   93 (467)
T KOG0201|consen   14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC   93 (467)
T ss_pred             ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence            35566889999999999999 458899999999754 334467899999999999999999999987765110       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        94 ~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvG  173 (467)
T KOG0201|consen   94 GGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFVG  173 (467)
T ss_pred             cCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhccccccc
Confidence                                                                                            


Q ss_pred             CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHH
Q 045092          160 PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTS  239 (307)
Q Consensus       160 t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  239 (307)
                      |+.|||||++....|+.|+||||+|++.+||++|.+|+....+..-..+             +..-..|.+.+.+...+.
T Consensus       174 TPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlfl-------------Ipk~~PP~L~~~~S~~~k  240 (467)
T KOG0201|consen  174 TPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFL-------------IPKSAPPRLDGDFSPPFK  240 (467)
T ss_pred             cccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEe-------------ccCCCCCccccccCHHHH
Confidence            9999999999988999999999999999999999999976555332222             455567778777888999


Q ss_pred             HHhccccCCCCCCCCCCHHHHHH
Q 045092          240 DGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       240 ~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      +++..|+ ..||+.||++.++++
T Consensus       241 EFV~~CL-~k~P~~RpsA~~LLK  262 (467)
T KOG0201|consen  241 EFVEACL-DKNPEFRPSAKELLK  262 (467)
T ss_pred             HHHHHHh-hcCcccCcCHHHHhh
Confidence            9999999 999999999999875

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.94  E-value=4.7e-27  Score=200.61  Aligned_cols=179  Identities=22%  Similarity=0.353  Sum_probs=135.0

Q ss_pred             cCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeec-CCC-----
Q 045092           88 NNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTE-TLK-----  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~-----  158 (307)
                      .+|.+.++||+|.||.||++. +.+|..||.|.++-.  +.........|+.+|++|+|||||++++.... ...     
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv   98 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV   98 (375)
T ss_pred             HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence            456667899999999999999 678999999998732  44455679999999999999999999983222 110     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l  178 (375)
T KOG0591|consen   99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL  178 (375)
T ss_pred             HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence                                                                                            


Q ss_pred             -----------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhccccc
Q 045092          159 -----------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC  227 (307)
Q Consensus       159 -----------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  227 (307)
                                 +||.||.||.+....|+.||||||+||++|||+.-+.||.+.      ++.. +...      +...--
T Consensus       179 ~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~------n~~~-L~~K------I~qgd~  245 (375)
T KOG0591|consen  179 SSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD------NLLS-LCKK------IEQGDY  245 (375)
T ss_pred             cchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc------cHHH-HHHH------HHcCCC
Confidence                       099999999999999999999999999999999999999643      2222 2222      344445


Q ss_pred             CCCc-hhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc-----ccccCeeeeee
Q 045092          228 SKFG-FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE-----VCSFGIVTLEI  280 (307)
Q Consensus       228 ~~l~-~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~-----v~~~g~~~~e~  280 (307)
                      |.++ .-++..+..++..|+ ..||+.||+...++..+....+     .+.++..++|.
T Consensus       246 ~~~p~~~YS~~l~~li~~ci-~vd~~~RP~t~~~v~di~~~l~~~s~~~~~~~~~l~~~  303 (375)
T KOG0591|consen  246 PPLPDEHYSTDLRELINMCI-AVDPEQRPDTVPYVQDIQSELDGESFQLHRFGARLFED  303 (375)
T ss_pred             CCCcHHHhhhHHHHHHHHHc-cCCcccCCCcchHHHHHHHHhcccchhHhHHHHhhhhh
Confidence            5566 456779999999999 9999999985555544443222     34455555544

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.93  E-value=1.6e-26  Score=214.60  Aligned_cols=179  Identities=20%  Similarity=0.311  Sum_probs=138.1

Q ss_pred             ccHHHHHHHhcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeec
Q 045092           78 FHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTE  155 (307)
Q Consensus        78 ~~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~  155 (307)
                      .+..++....+.+.+...||+|.||+||+|.+..  .||||.++...  .+..+.|.+|+.++++-+|.||+-+.|||..
T Consensus       382 ~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~  459 (678)
T KOG0193|consen  382 DSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN  459 (678)
T ss_pred             ccccccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence            4456666666777888999999999999999753  69999998653  4456789999999999999999999999987


Q ss_pred             CCCC----------------------------------------------------------------------------
Q 045092          156 TLKQ----------------------------------------------------------------------------  159 (307)
Q Consensus       156 ~~~~----------------------------------------------------------------------------  159 (307)
                      +...                                                                            
T Consensus       460 p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~  539 (678)
T KOG0193|consen  460 PPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKT  539 (678)
T ss_pred             CceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeee
Confidence            6211                                                                            


Q ss_pred             -------------Cccccchhhhcc---CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhc
Q 045092          160 -------------PIVYMAPEYAKH---GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLN  223 (307)
Q Consensus       160 -------------t~~y~aPE~~~~---~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  223 (307)
                                   .+.|||||+++.   ..|+..+||||||+|+|||++|..||..........+       +..|.   
T Consensus       540 ~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifm-------VGrG~---  609 (678)
T KOG0193|consen  540 RWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFM-------VGRGY---  609 (678)
T ss_pred             eeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEE-------ecccc---
Confidence                         667999999974   4689999999999999999999999973332221111       11111   


Q ss_pred             ccccCC-CchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          224 GASCSK-FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       224 ~~~~~~-l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                      -..|.. ....++.++.+|+..|| ..++++||.+.+|+..|+.+..
T Consensus       610 l~pd~s~~~s~~pk~mk~Ll~~C~-~~~~~eRP~F~~il~~l~~l~~  655 (678)
T KOG0193|consen  610 LMPDLSKIRSNCPKAMKRLLSDCW-KFDREERPLFPQLLSKLEELLP  655 (678)
T ss_pred             cCccchhhhccCHHHHHHHHHHHH-hcCcccCccHHHHHHHHHHhhh
Confidence            111221 23456779999999999 9999999999999998877543

>PHA02988 hypothetical protein; Provisional

Probab=99.93  E-value=2.9e-25  Score=198.40  Aligned_cols=173  Identities=17%  Similarity=0.217  Sum_probs=130.5

Q ss_pred             CcccHHHHHHHhcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhc---HHHHHHHHHHHhhCCCCCccceeee
Q 045092           76 GSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQG---NREIVNEIGMISALQHPNLVKLYRL  152 (307)
Q Consensus        76 ~~~~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~g~  152 (307)
                      +.++.+++     +......||+|++|.||+|.. +|+.||||.++......   .+.|.+|+.+|.+++||||++++|+
T Consensus        13 ~~i~~~~i-----~~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~   86 (283)
T PHA02988         13 KCIESDDI-----DKYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGF   86 (283)
T ss_pred             eecCHHHc-----CCCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeee
Confidence            34566666     222236799999999999998 68899999987543322   4678899999999999999999998


Q ss_pred             eec--CCCC-----------------------------------------------------------------------
Q 045092          153 CTE--TLKQ-----------------------------------------------------------------------  159 (307)
Q Consensus       153 ~~~--~~~~-----------------------------------------------------------------------  159 (307)
                      +.+  ....                                                                       
T Consensus        87 ~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~d  166 (283)
T PHA02988         87 IIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIIC  166 (283)
T ss_pred             EEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcc
Confidence            866  1000                                                                       


Q ss_pred             ----------------Cccccchhhhcc--CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhh
Q 045092          160 ----------------PIVYMAPEYAKH--GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARK  221 (307)
Q Consensus       160 ----------------t~~y~aPE~~~~--~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~  221 (307)
                                      +..|+|||++.+  +.++.++|||||||++|||++|+.||.....      .+........   
T Consensus       167 fg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~------~~~~~~i~~~---  237 (283)
T PHA02988        167 HGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT------KEIYDLIINK---  237 (283)
T ss_pred             cchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhc---
Confidence                            567999999976  6899999999999999999999999964321      1111111111   


Q ss_pred             hcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          222 LNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       222 ~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                         ...+.++..++..+.+++.+|| +.||++||++.+++..|+..
T Consensus       238 ---~~~~~~~~~~~~~l~~li~~cl-~~dp~~Rps~~ell~~l~~~  279 (283)
T PHA02988        238 ---NNSLKLPLDCPLEIKCIVEACT-SHDSIKRPNIKEILYNLSLY  279 (283)
T ss_pred             ---CCCCCCCCcCcHHHHHHHHHHh-cCCcccCcCHHHHHHHHHHH
Confidence               1123334456678999999999 99999999999999988763

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.92  E-value=4.8e-26  Score=210.03  Aligned_cols=155  Identities=20%  Similarity=0.282  Sum_probs=123.5

Q ss_pred             ccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----------
Q 045092           91 ASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----------  159 (307)
Q Consensus        91 ~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----------  159 (307)
                      ...+-||.|+.|.||+|++. ++.||||+++.-..       .+|+-|++|+|+||+.+.|+|......           
T Consensus       127 sELeWlGSGaQGAVF~Grl~-netVAVKKV~elkE-------TdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~Gq  198 (904)
T KOG4721|consen  127 SELEWLGSGAQGAVFLGRLH-NETVAVKKVRELKE-------TDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQ  198 (904)
T ss_pred             hhhhhhccCcccceeeeecc-CceehhHHHhhhhh-------hhHHHHHhccCcceeeEeeeecCCceeEEeeecccccc
Confidence            33577999999999999985 68899999854332       478899999999999999999765211           


Q ss_pred             ---------------------------------------------------------------------------Ccccc
Q 045092          160 ---------------------------------------------------------------------------PIVYM  164 (307)
Q Consensus       160 ---------------------------------------------------------------------------t~~y~  164 (307)
                                                                                                 |..||
T Consensus       199 L~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaWM  278 (904)
T KOG4721|consen  199 LYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAWM  278 (904)
T ss_pred             HHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhhh
Confidence                                                                                       88999


Q ss_pred             chhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhcc
Q 045092          165 APEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQ  244 (307)
Q Consensus       165 aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~  244 (307)
                      |||++.+...++|+||||||||||||+||..||...+....         .+.-   ....+.-.++..++.-+.-++..
T Consensus       279 APEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI---------IwGV---GsNsL~LpvPstcP~GfklL~Kq  346 (904)
T KOG4721|consen  279 APEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI---------IWGV---GSNSLHLPVPSTCPDGFKLLLKQ  346 (904)
T ss_pred             CHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee---------EEec---cCCcccccCcccCchHHHHHHHH
Confidence            99999999999999999999999999999999953332111         0111   11223334456788888999999


Q ss_pred             ccCCCCCCCCCCHHHHHHHhcc
Q 045092          245 CSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       245 C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      || +..|..||++.+++..|+-
T Consensus       347 cw-~sKpRNRPSFrqil~HldI  367 (904)
T KOG4721|consen  347 CW-NSKPRNRPSFRQILLHLDI  367 (904)
T ss_pred             HH-hcCCCCCccHHHHHHHHhh
Confidence            99 9999999999999998864

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.92  E-value=5e-25  Score=203.79  Aligned_cols=174  Identities=20%  Similarity=0.268  Sum_probs=136.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcH-HHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGN-REIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~-~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      .+.....++||+|-||.|+++....+..||||+++....... .+|.+||++|.+++|||||+|+|+|..+...      
T Consensus       537 Rs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EY  616 (807)
T KOG1094|consen  537 RSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEY  616 (807)
T ss_pred             hhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHH
Confidence            344556799999999999999988789999999987755544 7999999999999999999999999876321      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       617 mEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vq  696 (807)
T KOG1094|consen  617 MENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQ  696 (807)
T ss_pred             HhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCceeee
Confidence                                                                                            


Q ss_pred             -----CccccchhhhccCCCCchhHHHHHHHHHHHHHh--CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCch
Q 045092          160 -----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES--GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGF  232 (307)
Q Consensus       160 -----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt--g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  232 (307)
                           ++.|||+|.+..|+++.++|||+||+++||+++  ...||.....   ...++.....+..+   ....-+..+.
T Consensus       697 gr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~---e~vven~~~~~~~~---~~~~~l~~P~  770 (807)
T KOG1094|consen  697 GRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD---EQVVENAGEFFRDQ---GRQVVLSRPP  770 (807)
T ss_pred             cceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH---HHHHHhhhhhcCCC---CcceeccCCC
Confidence                 688999999999999999999999999999987  6778853221   12222222222211   1222233355


Q ss_pred             hhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          233 KFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       233 ~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      .++..+.+++++|| ..+-.+||+++++...|.+.
T Consensus       771 ~cp~~lyelml~Cw-~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  771 ACPQGLYELMLRCW-RRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             cCcHHHHHHHHHHh-chhhhcCCCHHHHHHHHHHh
Confidence            67789999999999 99999999999999888764

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.91  E-value=2.6e-25  Score=207.12  Aligned_cols=180  Identities=24%  Similarity=0.375  Sum_probs=137.8

Q ss_pred             HHHHHHHhcCcccCCcccCCCCeeEEEEEEc--CC--CE-EEEEEccC---CChhcHHHHHHHHHHHhhCCCCCccceee
Q 045092           80 LRQIKAATNNFASENEISERGFGPVYRGLLA--DG--KV-IEVKQLSS---KSKQGNREIVNEIGMISALQHPNLVKLYR  151 (307)
Q Consensus        80 ~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~--~~--~~-vAvK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~g  151 (307)
                      ...++...++-...++||+|+||.||+|.+.  ++  .. ||||..+.   .......+|.+|+++|++++|+|||++||
T Consensus       149 r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yG  228 (474)
T KOG0194|consen  149 RQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYG  228 (474)
T ss_pred             ccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence            3344555566667799999999999999954  22  23 89999875   23556779999999999999999999999


Q ss_pred             eeecCCCC------------------------------------------------------------------------
Q 045092          152 LCTETLKQ------------------------------------------------------------------------  159 (307)
Q Consensus       152 ~~~~~~~~------------------------------------------------------------------------  159 (307)
                      ++......                                                                        
T Consensus       229 Va~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGL  308 (474)
T KOG0194|consen  229 VAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGL  308 (474)
T ss_pred             EEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCcccc
Confidence            98765211                                                                        


Q ss_pred             ----------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhh
Q 045092          160 ----------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKL  222 (307)
Q Consensus       160 ----------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  222 (307)
                                      ++.|+|||.+..+.|+.++|||||||++||+++ |..||.+....      + +...+     .
T Consensus       309 s~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~------~-v~~kI-----~  376 (474)
T KOG0194|consen  309 SRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY------E-VKAKI-----V  376 (474)
T ss_pred             ccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH------H-HHHHH-----H
Confidence                            678999999999999999999999999999999 88898543321      1 22222     1


Q ss_pred             cccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccccccc
Q 045092          223 NGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAEVCS  272 (307)
Q Consensus       223 ~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~v~~  272 (307)
                      ........+...+..+..++..|| ..+|++||+|.++.+.|+.......
T Consensus       377 ~~~~r~~~~~~~p~~~~~~~~~c~-~~~p~~R~tm~~i~~~l~~~~~~~~  425 (474)
T KOG0194|consen  377 KNGYRMPIPSKTPKELAKVMKQCW-KKDPEDRPTMSTIKKKLEALEKKKE  425 (474)
T ss_pred             hcCccCCCCCCCHHHHHHHHHHhc-cCChhhccCHHHHHHHHHHHHhccc
Confidence            222233334456678888999999 9999999999999999887665433

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.91  E-value=1.2e-24  Score=194.19  Aligned_cols=114  Identities=25%  Similarity=0.409  Sum_probs=99.3

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      ..+|...+.||+|+||+||+|++. ++..||||.+...  .....+.+..|+.+|+.++|+|||.|++++..+...    
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM   88 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM   88 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence            467888899999999999999954 7899999998765  444566789999999999999999999887765211    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        89 EyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~  168 (429)
T KOG0595|consen   89 EYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPG  168 (429)
T ss_pred             EeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCch
Confidence                                                                                            


Q ss_pred             --------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCC
Q 045092          160 --------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICR  200 (307)
Q Consensus       160 --------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~  200 (307)
                              ++.|||||++..++|+.|+|+||.|++||++++|+.||+..
T Consensus       169 ~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~  217 (429)
T KOG0595|consen  169 SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE  217 (429)
T ss_pred             hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence                    88999999999999999999999999999999999999643

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.91  E-value=2.4e-24  Score=190.37  Aligned_cols=167  Identities=20%  Similarity=0.268  Sum_probs=128.8

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc----CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           87 TNNFASENEISERGFGPVYRGLLA----DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      .++|...+.||+|+||.||+|.+.    .+..||+|.++... ......|.+|+.++.+++|+||++++|++......  
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   83 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI   83 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence            356888899999999999999843    35689999987543 23345799999999999999999999987654211  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        84 v~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~  163 (266)
T cd05064          84 VTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIY  163 (266)
T ss_pred             EEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccchh
Confidence                                                                                            


Q ss_pred             -------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCc
Q 045092          160 -------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFG  231 (307)
Q Consensus       160 -------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~  231 (307)
                             +..|+|||.+.++.++.++|||||||++||+++ |+.||.......   +.    ..+..      ......+
T Consensus       164 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~---~~----~~~~~------~~~~~~~  230 (266)
T cd05064         164 TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD---VI----KAVED------GFRLPAP  230 (266)
T ss_pred             cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---HH----HHHHC------CCCCCCC
Confidence                   357999999999999999999999999999875 999996432211   11    11111      1122234


Q ss_pred             hhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          232 FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       232 ~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      ..++..+.+++..|| +.+|.+||++.+|.+.|+..
T Consensus       231 ~~~~~~~~~li~~c~-~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         231 RNCPNLLHQLMLDCW-QKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             CCCCHHHHHHHHHHc-CCCchhCCCHHHHHHHHHhh
Confidence            456778999999999 99999999999999988753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.91  E-value=4.6e-25  Score=205.33  Aligned_cols=173  Identities=21%  Similarity=0.326  Sum_probs=139.9

Q ss_pred             HHHHHHhcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC
Q 045092           81 RQIKAATNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ  159 (307)
Q Consensus        81 ~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  159 (307)
                      .+++....+....++||-|.||.||.|.|+ ....||||.++... -..++|++|+.+|+.++|||+|+|+|+|......
T Consensus       260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF  338 (1157)
T KOG4278|consen  260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF  338 (1157)
T ss_pred             chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence            566666667777899999999999999975 46789999997653 3467999999999999999999999999765211


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       339 YIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgD  418 (1157)
T KOG4278|consen  339 YIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGD  418 (1157)
T ss_pred             EEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCC
Confidence                                                                                            


Q ss_pred             ----------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccC
Q 045092          160 ----------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCS  228 (307)
Q Consensus       160 ----------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  228 (307)
                                ++.|.|||.+....++.|+|||+|||+||||.| |..||.+.+      +. .+..+++.+.      ..
T Consensus       419 TYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid------lS-qVY~LLEkgy------RM  485 (1157)
T KOG4278|consen  419 TYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID------LS-QVYGLLEKGY------RM  485 (1157)
T ss_pred             ceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc------HH-HHHHHHhccc------cc
Confidence                      788999999999999999999999999999999 888885333      21 1333333332      23


Q ss_pred             CCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          229 KFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       229 ~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      .-+..|+..+.++++.|| +.+|.+||++.++-+.++...
T Consensus       486 ~~PeGCPpkVYeLMraCW-~WsPsDRPsFaeiHqafEtmf  524 (1157)
T KOG4278|consen  486 DGPEGCPPKVYELMRACW-NWSPSDRPSFAEIHQAFETMF  524 (1157)
T ss_pred             cCCCCCCHHHHHHHHHHh-cCCcccCccHHHHHHHHHHHh
Confidence            335678899999999999 999999999999988887643

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.91  E-value=7.7e-25  Score=203.87  Aligned_cols=169  Identities=23%  Similarity=0.370  Sum_probs=136.0

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEEcC---C--CEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC
Q 045092           86 ATNNFASENEISERGFGPVYRGLLAD---G--KVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ  159 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~~~---~--~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  159 (307)
                      ........++||+|.||.||+|.+.+   |  -.||||..+.. ...+.+.|+.|+.+|++++|||||+|+|.|.+..-.
T Consensus       387 ~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~W  466 (974)
T KOG4257|consen  387 RRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPMW  466 (974)
T ss_pred             ehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecccee
Confidence            33445567889999999999999532   2  35899998864 455567899999999999999999999999876211


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       467 ivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~y  546 (974)
T KOG4257|consen  467 IVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAY  546 (974)
T ss_pred             EEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccch
Confidence                                                                                            


Q ss_pred             --------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC
Q 045092          160 --------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF  230 (307)
Q Consensus       160 --------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l  230 (307)
                              ++.|||||.+.-.+++.++|||-|||.+||+++ |..||.+-...+-.-.             +...-....
T Consensus       547 YkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~-------------iEnGeRlP~  613 (974)
T KOG4257|consen  547 YKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGH-------------IENGERLPC  613 (974)
T ss_pred             hhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEE-------------ecCCCCCCC
Confidence                    788999999999999999999999999999988 9999976444332110             334445566


Q ss_pred             chhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          231 GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       231 ~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      +..|+..+..++.+|| +.+|.+||.+.++...|+++.
T Consensus       614 P~nCPp~LYslmskcW-ayeP~kRPrftei~~~lsdv~  650 (974)
T KOG4257|consen  614 PPNCPPALYSLMSKCW-AYEPSKRPRFTEIKAILSDVL  650 (974)
T ss_pred             CCCCChHHHHHHHHHh-ccCcccCCcHHHHHHHHHHHH
Confidence            7788999999999999 999999999999887776543

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.91  E-value=4.1e-24  Score=220.73  Aligned_cols=178  Identities=24%  Similarity=0.355  Sum_probs=136.1

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      ...|...+.||+|+||.||+|.. .++..||||.+......    ...|++.+++++|||||+++|+|.+....      
T Consensus       689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey  764 (968)
T PLN00113        689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEY  764 (968)
T ss_pred             HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeC
Confidence            45677889999999999999995 57899999998643322    23468899999999999999998764211      


Q ss_pred             ----------------------------------------------------------------------------Cccc
Q 045092          160 ----------------------------------------------------------------------------PIVY  163 (307)
Q Consensus       160 ----------------------------------------------------------------------------t~~y  163 (307)
                                                                                                  |+.|
T Consensus       765 ~~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~t~~y  844 (968)
T PLN00113        765 IEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAY  844 (968)
T ss_pred             CCCCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEEeccccccccCCCccccccc
Confidence                                                                                        3789


Q ss_pred             cchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCch------hhHHH
Q 045092          164 MAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGF------KFYRR  237 (307)
Q Consensus       164 ~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~  237 (307)
                      ||||++.++.++.++|||||||++|||+||+.|++.... ....+.+|......... ....+++.+..      ....+
T Consensus       845 ~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  922 (968)
T PLN00113        845 VAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG-VHGSIVEWARYCYSDCH-LDMWIDPSIRGDVSVNQNEIVE  922 (968)
T ss_pred             cCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC-CCCcHHHHHHHhcCccc-hhheeCccccCCCCccHHHHHH
Confidence            999999999999999999999999999999999954332 23446666654433322 33344444422      22337


Q ss_pred             HHHHhccccCCCCCCCCCCHHHHHHHhccccccc
Q 045092          238 TSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAEVC  271 (307)
Q Consensus       238 ~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~v~  271 (307)
                      +.+++.+|| +.||++||+|.+|+++|+....-.
T Consensus       923 ~~~l~~~Cl-~~~P~~RPt~~evl~~L~~~~~~~  955 (968)
T PLN00113        923 VMNLALHCT-ATDPTARPCANDVLKTLESASRSS  955 (968)
T ss_pred             HHHHHHhhC-cCCchhCcCHHHHHHHHHHhhccc
Confidence            889999999 999999999999999998865433

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.91  E-value=6.7e-25  Score=193.41  Aligned_cols=159  Identities=31%  Similarity=0.476  Sum_probs=119.4

Q ss_pred             cCCcccCCCCeeEEEEEEc-----CCCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           92 SENEISERGFGPVYRGLLA-----DGKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        92 ~~~~lG~G~~g~Vy~~~~~-----~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      ..+.||.|.||.||+|.+.     .+..|+||.++.. .....+.|.+|++.+.+++|+||++++|+|......      
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence            3578999999999999965     3568999999654 333467899999999999999999999999853211      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~  162 (259)
T PF07714_consen   83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKND  162 (259)
T ss_dssp             -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEES
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                                                                                            


Q ss_pred             -----CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchh
Q 045092          160 -----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFK  233 (307)
Q Consensus       160 -----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  233 (307)
                           ...|+|||.+..+.++.++||||||+++|||++ |+.|+.....      .+.. ..+..+.      .+..+..
T Consensus       163 ~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~------~~~~-~~~~~~~------~~~~~~~  229 (259)
T PF07714_consen  163 SSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN------EEII-EKLKQGQ------RLPIPDN  229 (259)
T ss_dssp             TTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH------HHHH-HHHHTTE------ETTSBTT
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccc------cccc-ccccccc------cceeccc
Confidence                 557999999999999999999999999999999 6788743311      1111 1122221      2333445


Q ss_pred             hHHHHHHHhccccCCCCCCCCCCHHHHHHHh
Q 045092          234 FYRRTSDGNDQCSSSVTPTNRPLMSFVVSML  264 (307)
Q Consensus       234 ~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L  264 (307)
                      ++..+.+++..|| ..+|.+||++.++++.|
T Consensus       230 ~~~~~~~li~~C~-~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  230 CPKDIYSLIQQCW-SHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             SBHHHHHHHHHHT--SSGGGS--HHHHHHHH
T ss_pred             hhHHHHHHHHHHc-CCChhhCcCHHHHHhcC
Confidence            6778999999999 99999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.91  E-value=5.8e-24  Score=192.72  Aligned_cols=171  Identities=21%  Similarity=0.350  Sum_probs=130.2

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCC----EEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGK----VIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~----~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      ++|+..+.||+|+||.||+|.+. ++.    .||||.++... ....+++.+|+.++..++|+||++++|+|......  
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~v   86 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   86 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCceee
Confidence            46888999999999999999853 443    38999987543 34456899999999999999999999988654100  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        87 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~  166 (316)
T cd05108          87 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEY  166 (316)
T ss_pred             eecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCCcce
Confidence                                                                                            


Q ss_pred             -------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCc
Q 045092          160 -------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFG  231 (307)
Q Consensus       160 -------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~  231 (307)
                             +..|+|||++.++.++.++|||||||++|||++ |+.|+......      + +......+      .....+
T Consensus       167 ~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~------~-~~~~~~~~------~~~~~~  233 (316)
T cd05108         167 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS------E-ISSILEKG------ERLPQP  233 (316)
T ss_pred             eccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH------H-HHHHHhCC------CCCCCC
Confidence                   346999999999999999999999999999998 99998532211      1 11111111      111122


Q ss_pred             hhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccccccc
Q 045092          232 FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAEVCS  272 (307)
Q Consensus       232 ~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~v~~  272 (307)
                      ..++..+.+++..|| +.+|.+||++.+++..|......+.
T Consensus       234 ~~~~~~~~~li~~cl-~~~p~~Rps~~~l~~~l~~~~~~~~  273 (316)
T cd05108         234 PICTIDVYMIMVKCW-MIDADSRPKFRELIIEFSKMARDPQ  273 (316)
T ss_pred             CCCCHHHHHHHHHHc-cCChhhCcCHHHHHHHHHHHHcCCc
Confidence            345568899999999 9999999999999999887766554

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.91  E-value=6.6e-24  Score=186.62  Aligned_cols=165  Identities=25%  Similarity=0.377  Sum_probs=128.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      .++|+..++||+|+||.||+|...++..||+|.+.... ...+.+.+|+.++.+++|+||+++++++.+....       
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM   83 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence            46788899999999999999998778889999986543 3356899999999999999999999876544111       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~  163 (261)
T cd05072          84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREG  163 (261)
T ss_pred             CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCceeccCC
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhH
Q 045092          160 ---PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFY  235 (307)
Q Consensus       160 ---t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  235 (307)
                         +..|+|||++..+.++.++|||||||++|||++ |+.||......   .+.    ..+..+      ........++
T Consensus       164 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~---~~~----~~~~~~------~~~~~~~~~~  230 (261)
T cd05072         164 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS---DVM----SALQRG------YRMPRMENCP  230 (261)
T ss_pred             CccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH---HHH----HHHHcC------CCCCCCCCCC
Confidence               346999999998999999999999999999998 99998532211   111    111111      1112223456


Q ss_pred             HHHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          236 RRTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       236 ~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      ..+.+++.+|+ ..+|++||++.++.+.|++
T Consensus       231 ~~~~~li~~~l-~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         231 DELYDIMKTCW-KEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             HHHHHHHHHHc-cCCcccCcCHHHHHHHHhc
Confidence            68999999999 9999999999999999875

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.91  E-value=2.4e-24  Score=197.01  Aligned_cols=170  Identities=23%  Similarity=0.301  Sum_probs=128.4

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEE------cCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhC-CCCCccceeeeeecCC
Q 045092           86 ATNNFASENEISERGFGPVYRGLL------ADGKVIEVKQLSSKS-KQGNREIVNEIGMISAL-QHPNLVKLYRLCTETL  157 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~  157 (307)
                      ..++|.+.+.||+|+||.||+|..      .++..||||+++... ......+.+|+.++.++ +|+||++++|+|....
T Consensus         5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~   84 (338)
T cd05102           5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN   84 (338)
T ss_pred             chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence            456788899999999999999973      235689999987543 23346799999999999 8999999998654210


Q ss_pred             C-------------------------------------------------------------------------------
Q 045092          158 K-------------------------------------------------------------------------------  158 (307)
Q Consensus       158 ~-------------------------------------------------------------------------------  158 (307)
                      .                                                                               
T Consensus        85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (338)
T cd05102          85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD  164 (338)
T ss_pred             CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence            0                                                                               


Q ss_pred             -----------------C--------------------------------------------------------Cccccc
Q 045092          159 -----------------Q--------------------------------------------------------PIVYMA  165 (307)
Q Consensus       159 -----------------~--------------------------------------------------------t~~y~a  165 (307)
                                       .                                                        ++.|+|
T Consensus       165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~a  244 (338)
T cd05102         165 DLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMA  244 (338)
T ss_pred             ccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccC
Confidence                             0                                                        356999


Q ss_pred             hhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhcc
Q 045092          166 PEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQ  244 (307)
Q Consensus       166 PE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~  244 (307)
                      ||++.++.++.++|||||||++|||++ |+.||.......      .....+..+      ..+..+...+..+.+++..
T Consensus       245 PE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~------~~~~~~~~~------~~~~~~~~~~~~l~~li~~  312 (338)
T cd05102         245 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE------EFCQRLKDG------TRMRAPENATPEIYRIMLA  312 (338)
T ss_pred             cHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH------HHHHHHhcC------CCCCCCCCCCHHHHHHHHH
Confidence            999999999999999999999999997 999986432211      111112111      1222334556689999999


Q ss_pred             ccCCCCCCCCCCHHHHHHHhcccc
Q 045092          245 CSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       245 C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      |+ +.||.+||++.++++.|+...
T Consensus       313 cl-~~dp~~RPs~~el~~~l~~~~  335 (338)
T cd05102         313 CW-QGDPKERPTFSALVEILGDLL  335 (338)
T ss_pred             Hc-cCChhhCcCHHHHHHHHHHHH
Confidence            99 999999999999999998643

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=4.4e-24  Score=192.35  Aligned_cols=169  Identities=19%  Similarity=0.223  Sum_probs=127.8

Q ss_pred             hcCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      .++|++..+||.|..++||+|+ .+.+..||||++... ...+.+.+++|++.|+.++||||++++..|..+...     
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp  104 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP  104 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence            5678889999999999999999 678899999999854 334468899999999999999999999887765211     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       105 fMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~  184 (516)
T KOG0582|consen  105 FMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQV  184 (516)
T ss_pred             hhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCceee
Confidence                                                                                            


Q ss_pred             --------Cccccchhhhcc--CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhc--cccc
Q 045092          160 --------PIVYMAPEYAKH--GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLN--GASC  227 (307)
Q Consensus       160 --------t~~y~aPE~~~~--~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~  227 (307)
                              |+.|||||++.+  ..|+.|+|||||||+.+||++|..||....+...      +...+.......  ...+
T Consensus       185 ~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv------Ll~tLqn~pp~~~t~~~~  258 (516)
T KOG0582|consen  185 TRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKV------LLLTLQNDPPTLLTSGLD  258 (516)
T ss_pred             EeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHH------HHHHhcCCCCCcccccCC
Confidence                    899999999654  3599999999999999999999999975443221      112221111000  0111


Q ss_pred             CCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          228 SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       228 ~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ..-...++..+.+++-.|+ +.||.+|||++++++
T Consensus       259 ~d~~k~~~ksf~e~i~~CL-~kDP~kRptAskLlk  292 (516)
T KOG0582|consen  259 KDEDKKFSKSFREMIALCL-VKDPSKRPTASKLLK  292 (516)
T ss_pred             hHHhhhhcHHHHHHHHHHh-hcCcccCCCHHHHhc
Confidence            1112234458899999999 999999999998864

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.91  E-value=5.9e-24  Score=186.53  Aligned_cols=163  Identities=19%  Similarity=0.317  Sum_probs=125.0

Q ss_pred             cCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--------
Q 045092           88 NNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--------  159 (307)
                      ++|+..+.||+|+||.||++...++..+|+|.+... ......|.+|+.++.+++|+||+++++++......        
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   82 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME   82 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence            457778999999999999999877788999988643 23346789999999999999999999987654110        


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        83 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~  162 (256)
T cd05114          83 NGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAK  162 (256)
T ss_pred             CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCC
Confidence                                                                                            


Q ss_pred             -CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHH
Q 045092          160 -PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRR  237 (307)
Q Consensus       160 -t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  237 (307)
                       +..|+|||++.+..++.++||||||+++|||++ |+.||.....      .+.+.. +..+.      .+..+...+..
T Consensus       163 ~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~------~~~~~~-i~~~~------~~~~~~~~~~~  229 (256)
T cd05114         163 FPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN------YEVVEM-ISRGF------RLYRPKLASMT  229 (256)
T ss_pred             CchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH------HHHHHH-HHCCC------CCCCCCCCCHH
Confidence             346999999988889999999999999999999 8999853321      111111 11111      11112234457


Q ss_pred             HHHHhccccCCCCCCCCCCHHHHHHHhc
Q 045092          238 TSDGNDQCSSSVTPTNRPLMSFVVSMLE  265 (307)
Q Consensus       238 ~~~l~~~C~~~~dP~~RPs~~~vl~~L~  265 (307)
                      +.+++.+|| +.+|.+||++.++++.|.
T Consensus       230 ~~~li~~c~-~~~p~~Rps~~~l~~~l~  256 (256)
T cd05114         230 VYEVMYSCW-HEKPEGRPTFAELLRAIT  256 (256)
T ss_pred             HHHHHHHHc-cCCcccCcCHHHHHHhhC
Confidence            899999999 999999999999998874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.91  E-value=1.5e-24  Score=204.04  Aligned_cols=157  Identities=21%  Similarity=0.303  Sum_probs=124.6

Q ss_pred             cCCcccCCCCeeEEEEEEc--CC--CEEEEEEccCCChh-cHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           92 SENEISERGFGPVYRGLLA--DG--KVIEVKQLSSKSKQ-GNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        92 ~~~~lG~G~~g~Vy~~~~~--~~--~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      +.++||+|.||.|++|.|.  +|  ..||||++...... ...+|++|+.+|.+|+|+|+++|||...+....       
T Consensus       114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~ELap  193 (1039)
T KOG0199|consen  114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFELAP  193 (1039)
T ss_pred             HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhhhcc
Confidence            3478999999999999974  34  46899999866443 678999999999999999999999998854100       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       194 lGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p  273 (1039)
T KOG0199|consen  194 LGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAP  273 (1039)
T ss_pred             cchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEecC
Confidence                                                                                            


Q ss_pred             ----CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          160 ----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       160 ----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                          ...|.|||.+..+.|+.++|||+|||++|||+| |..||.+.....       +...+.++.      .-.-+..|
T Consensus       274 ~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q-------IL~~iD~~e------rLpRPk~c  340 (1039)
T KOG0199|consen  274 QRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ-------ILKNIDAGE------RLPRPKYC  340 (1039)
T ss_pred             CCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH-------HHHhccccc------cCCCCCCC
Confidence                677999999999999999999999999999999 889996554322       111111111      11113467


Q ss_pred             HHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      +..+++++..|| ..+|++||++..|..
T Consensus       341 sedIY~imk~cW-ah~paDRptFsair~  367 (1039)
T KOG0199|consen  341 SEDIYQIMKNCW-AHNPADRPTFSAIRE  367 (1039)
T ss_pred             hHHHHHHHHHhc-cCCccccccHHHHHH
Confidence            889999999999 999999999999863

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.91  E-value=9.9e-24  Score=187.67  Aligned_cols=165  Identities=25%  Similarity=0.385  Sum_probs=127.1

Q ss_pred             cCcccCCcccCCCCeeEEEEEEcC-C-----CEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC--
Q 045092           88 NNFASENEISERGFGPVYRGLLAD-G-----KVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK--  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~~-~-----~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~--  158 (307)
                      ++|+..+.||+|+||.||+|.... +     ..||+|.+.... ......|.+|+.++.+++|+||+++++++.....  
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            467788999999999999998532 2     579999986543 2334578999999999999999999987653200  


Q ss_pred             ----------------------------------C---------------------------------------------
Q 045092          159 ----------------------------------Q---------------------------------------------  159 (307)
Q Consensus       159 ----------------------------------~---------------------------------------------  159 (307)
                                                        .                                             
T Consensus        85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~  164 (283)
T cd05048          85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVK  164 (283)
T ss_pred             EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEE
Confidence                                              0                                             


Q ss_pred             ------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHH
Q 045092          160 ------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGS  214 (307)
Q Consensus       160 ------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~  214 (307)
                                              ++.|+|||++.++.++.++|||||||++|||++ |..||......+   +    ..
T Consensus       165 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~---~----~~  237 (283)
T cd05048         165 ISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE---V----IE  237 (283)
T ss_pred             ECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH---H----HH
Confidence                                    356999999999999999999999999999998 999986433211   1    11


Q ss_pred             HHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          215 YLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       215 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      .+..      ...+..+..++.++.+++..|| +.||.+||++.+|++.|+.
T Consensus       238 ~i~~------~~~~~~~~~~~~~~~~l~~~c~-~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         238 MIRS------RQLLPCPEDCPARVYALMIECW-NEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHc------CCcCCCcccCCHHHHHHHHHHc-cCChhhCcCHHHHHHHHhc
Confidence            1111      1122334566779999999999 9999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=9.8e-25  Score=194.83  Aligned_cols=165  Identities=21%  Similarity=0.252  Sum_probs=125.8

Q ss_pred             cCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCCChh-------cHHHHHHHHHHHhhCCCCCccceeeeeecCCCC
Q 045092           88 NNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQ-------GNREIVNEIGMISALQHPNLVKLYRLCTETLKQ  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  159 (307)
                      +-|...+.||.|+||.|-+|. ..+|+.||||+++.....       ......+|+++|++++|||||++++++..+...
T Consensus       172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~  251 (475)
T KOG0615|consen  172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS  251 (475)
T ss_pred             ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence            346677899999999999999 568999999999753211       223457999999999999999999999876321


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       252 YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~  331 (475)
T KOG0615|consen  252 YMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGE  331 (475)
T ss_pred             EEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhcccc
Confidence                                                                                            


Q ss_pred             ---------CccccchhhhccCC---CCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhccccc
Q 045092          160 ---------PIVYMAPEYAKHGY---LTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC  227 (307)
Q Consensus       160 ---------t~~y~aPE~~~~~~---~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  227 (307)
                               |+.|.|||++.++.   +..++|+||+||+||-+++|.+||......  ..+.+    .+..|+   -.+-
T Consensus       332 ~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~--~sl~e----QI~~G~---y~f~  402 (475)
T KOG0615|consen  332 GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTD--PSLKE----QILKGR---YAFG  402 (475)
T ss_pred             ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCC--ccHHH----HHhcCc---cccc
Confidence                     99999999998653   445889999999999999999999644322  22222    222222   1222


Q ss_pred             CCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          228 SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       228 ~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      |..-.....+..+++.+++ ..||++||++.++++
T Consensus       403 p~~w~~Iseea~dlI~~mL-~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  403 PLQWDRISEEALDLINWML-VVDPENRPSADEALN  436 (475)
T ss_pred             ChhhhhhhHHHHHHHHHhh-EeCcccCcCHHHHhc
Confidence            3333456668999999999 999999999999975

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.90  E-value=5.6e-24  Score=186.93  Aligned_cols=167  Identities=23%  Similarity=0.373  Sum_probs=131.9

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           86 ATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      ...+|...+.||.|+||.||+|...++..+|+|.+..........+.+|+.++..++|+||+++++++.+....      
T Consensus         4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   83 (261)
T cd05148           4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL   83 (261)
T ss_pred             cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence            45678888999999999999999777899999999766555567899999999999999999999877544110      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~  163 (261)
T cd05148          84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSD  163 (261)
T ss_pred             cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccccccC
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhH
Q 045092          160 ---PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFY  235 (307)
Q Consensus       160 ---t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  235 (307)
                         +..|+|||.+.++.++.++||||||+++++|++ |+.||.....   ......    +.      ....+..+..++
T Consensus       164 ~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~---~~~~~~----~~------~~~~~~~~~~~~  230 (261)
T cd05148         164 KKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN---HEVYDQ----IT------AGYRMPCPAKCP  230 (261)
T ss_pred             CCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH---HHHHHH----HH------hCCcCCCCCCCC
Confidence               346999999998899999999999999999998 8999854321   111111    11      111222334566


Q ss_pred             HHHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          236 RRTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       236 ~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      ..+.+++.+|+ +.+|.+||++.++++.|+.
T Consensus       231 ~~~~~~i~~~l-~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         231 QEIYKIMLECW-AAEPEDRPSFKALREELDN  260 (261)
T ss_pred             HHHHHHHHHHc-CCCchhCcCHHHHHHHHhc
Confidence            68999999999 9999999999999999975

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.90  E-value=1.4e-23  Score=184.95  Aligned_cols=165  Identities=22%  Similarity=0.332  Sum_probs=129.2

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      .+|...+.||+|+||.||+|... +++.||+|.+... ......+.+|++++.+++|+||+++++++......       
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM   84 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence            45777899999999999999954 6889999998643 33456799999999999999999999987554111       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~  164 (263)
T cd05052          85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG  164 (263)
T ss_pred             CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeeccCC
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhH
Q 045092          160 ---PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFY  235 (307)
Q Consensus       160 ---t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  235 (307)
                         +..|+|||++.++.++.++|||||||++|||++ |..|+.....      .+ ....+      .....+..+..++
T Consensus       165 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~------~~-~~~~~------~~~~~~~~~~~~~  231 (263)
T cd05052         165 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL------SQ-VYELL------EKGYRMERPEGCP  231 (263)
T ss_pred             CCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH------HH-HHHHH------HCCCCCCCCCCCC
Confidence               346999999998899999999999999999998 8999853221      11 11111      1122233445567


Q ss_pred             HHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          236 RRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       236 ~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      ..+.+++.+|+ +.+|++||++.+++++|+..
T Consensus       232 ~~~~~li~~cl-~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         232 PKVYELMRACW-QWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             HHHHHHHHHHc-cCCcccCCCHHHHHHHHHhh
Confidence            78999999999 99999999999999998764

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.90  E-value=1.2e-23  Score=186.71  Aligned_cols=166  Identities=24%  Similarity=0.382  Sum_probs=126.9

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc------CCCEEEEEEccCCChh-cHHHHHHHHHHHhhCCCCCccceeeeeecCCC-
Q 045092           87 TNNFASENEISERGFGPVYRGLLA------DGKVIEVKQLSSKSKQ-GNREIVNEIGMISALQHPNLVKLYRLCTETLK-  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-  158 (307)
                      .++|...+.||+|+||.||+|...      ++..||||.++..... ..+.|.+|++++.+++|+||+++++++..... 
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   83 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP   83 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence            356777899999999999999853      3478999998765443 45689999999999999999999887654200 


Q ss_pred             -----------------------------C--------------------------------------------------
Q 045092          159 -----------------------------Q--------------------------------------------------  159 (307)
Q Consensus       159 -----------------------------~--------------------------------------------------  159 (307)
                                                   .                                                  
T Consensus        84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl  163 (280)
T cd05049          84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKI  163 (280)
T ss_pred             EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEE
Confidence                                         0                                                  


Q ss_pred             -----------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHH
Q 045092          160 -----------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSY  215 (307)
Q Consensus       160 -----------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~  215 (307)
                                             ++.|+|||++.++.++.++|||||||+++||++ |+.||.......   +.+    .
T Consensus       164 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~---~~~----~  236 (280)
T cd05049         164 GDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE---VIE----C  236 (280)
T ss_pred             CCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHH----H
Confidence                                   346999999999999999999999999999999 999985432211   111    1


Q ss_pred             HHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          216 LKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       216 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      +..      ...+..+..++..+.+++..|+ +.||++||++.+|++.|+.
T Consensus       237 ~~~------~~~~~~~~~~~~~~~~li~~~l-~~~p~~Rp~~~eil~~l~~  280 (280)
T cd05049         237 ITQ------GRLLQRPRTCPSEVYDIMLGCW-KRDPQQRINIKDIHERLQK  280 (280)
T ss_pred             HHc------CCcCCCCCCCCHHHHHHHHHHc-CCCcccCCCHHHHHHHhhC
Confidence            111      1112223345668999999999 9999999999999998863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.90  E-value=4e-23  Score=186.03  Aligned_cols=173  Identities=21%  Similarity=0.273  Sum_probs=124.7

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcC-----------------CCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccc
Q 045092           87 TNNFASENEISERGFGPVYRGLLAD-----------------GKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVK  148 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~-----------------~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~  148 (307)
                      .++|...+.||+|+||.||++...+                 +..||+|.+.... ......|.+|+.++.+++|+||++
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   83 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR   83 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence            3578888999999999999997432                 3469999987543 334567999999999999999999


Q ss_pred             eeeeeecCCCC---------------------------------------------------------------------
Q 045092          149 LYRLCTETLKQ---------------------------------------------------------------------  159 (307)
Q Consensus       149 l~g~~~~~~~~---------------------------------------------------------------------  159 (307)
                      +++++.+....                                                                     
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~d  163 (304)
T cd05096          84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRD  163 (304)
T ss_pred             EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            99876432000                                                                     


Q ss_pred             ---------------------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh--CCCCCc
Q 045092          160 ---------------------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES--GRSNVI  198 (307)
Q Consensus       160 ---------------------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt--g~~p~~  198 (307)
                                                             +..|+|||++..+.++.++||||||+++|||++  +..|+.
T Consensus       164 lkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~  243 (304)
T cd05096         164 LATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYG  243 (304)
T ss_pred             cchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCC
Confidence                                                   346999999999999999999999999999997  456664


Q ss_pred             CCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          199 CRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       199 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      ....   ......+...+....   .......+..++..+.+++.+|| +.+|.+||++.+|.+.|++
T Consensus       244 ~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~cl-~~~p~~RPs~~~i~~~l~~  304 (304)
T cd05096         244 ELTD---EQVIENAGEFFRDQG---RQVYLFRPPPCPQGLYELMLQCW-SRDCRERPSFSDIHAFLTE  304 (304)
T ss_pred             cCCH---HHHHHHHHHHhhhcc---ccccccCCCCCCHHHHHHHHHHc-cCCchhCcCHHHHHHHHhC
Confidence            3221   112222222211110   11111122345668999999999 9999999999999988863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=2.8e-24  Score=198.76  Aligned_cols=162  Identities=20%  Similarity=0.313  Sum_probs=131.0

Q ss_pred             cCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           88 NNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      ..|..-.+||+|+.|.||.+. ..+++.||||++........+-.++|+.+|+..+|+|||+++..+......       
T Consensus       273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym  352 (550)
T KOG0578|consen  273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM  352 (550)
T ss_pred             hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence            347777899999999999999 668899999999877666667789999999999999999998766544211       


Q ss_pred             -------------------------------------------------------------------------------C
Q 045092          160 -------------------------------------------------------------------------------P  160 (307)
Q Consensus       160 -------------------------------------------------------------------------------t  160 (307)
                                                                                                     |
T Consensus       353 ~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGT  432 (550)
T KOG0578|consen  353 EGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGT  432 (550)
T ss_pred             CCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCC
Confidence                                                                                           9


Q ss_pred             ccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC--chhhHHHH
Q 045092          161 IVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF--GFKFYRRT  238 (307)
Q Consensus       161 ~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~  238 (307)
                      ++|||||++....|..|+||||||++++||+-|.+||....+-...++             +...-.|.+  +......+
T Consensus       433 PYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyL-------------Ia~ng~P~lk~~~klS~~~  499 (550)
T KOG0578|consen  433 PYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-------------IATNGTPKLKNPEKLSPEL  499 (550)
T ss_pred             CCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHH-------------HhhcCCCCcCCccccCHHH
Confidence            999999999999999999999999999999999999975333222211             122222333  34456689


Q ss_pred             HHHhccccCCCCCCCCCCHHHHHHH
Q 045092          239 SDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .++..+|+ +.|+.+||++.++|+.
T Consensus       500 kdFL~~cL-~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  500 KDFLDRCL-VVDVEQRASAKELLEH  523 (550)
T ss_pred             HHHHHHHh-hcchhcCCCHHHHhcC
Confidence            99999999 9999999999999863

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.90  E-value=3.5e-23  Score=182.45  Aligned_cols=168  Identities=21%  Similarity=0.332  Sum_probs=128.8

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      ++|...+.||+|+||.||+|.. .+++.||||.+...   .......+.+|+.++++++|+||+++++++.+....    
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            5788999999999999999994 47899999987532   233345789999999999999999999887643110    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~  161 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT  161 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhH
Confidence                                                                                            


Q ss_pred             -------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC-c
Q 045092          160 -------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF-G  231 (307)
Q Consensus       160 -------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l-~  231 (307)
                             ++.|+|||++.+..++.++||||||+++|||++|+.|+.....    ........       +.....+.. .
T Consensus       162 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~----~~~~~~~~-------~~~~~~~~~~~  230 (267)
T cd08228         162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLFSLCQK-------IEQCDYPPLPT  230 (267)
T ss_pred             HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc----cHHHHHHH-------HhcCCCCCCCh
Confidence                   5679999999888899999999999999999999999853221    11121111       111112222 2


Q ss_pred             hhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          232 FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       232 ~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      ..++..+.+++.+|| +.+|++||++.+|++.|+..
T Consensus       231 ~~~~~~~~~li~~cl-~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         231 EHYSEKLRELVSMCI-YPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             hhcCHHHHHHHHHHC-CCCcccCcCHHHHHHHHHHh
Confidence            345568999999999 99999999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.90  E-value=1.7e-23  Score=184.86  Aligned_cols=170  Identities=16%  Similarity=0.176  Sum_probs=130.2

Q ss_pred             HHHHHhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-
Q 045092           82 QIKAATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-  159 (307)
Q Consensus        82 el~~~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-  159 (307)
                      |++.+++++.....||+|+||.||+|.. .++..||+|.+........+.+.+|+.++.+++|+||+++++++...... 
T Consensus         2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   81 (268)
T cd06624           2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK   81 (268)
T ss_pred             CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence            4556788888888999999999999994 46788999998776666677899999999999999999999987654100 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~  161 (268)
T cd06624          82 IFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAG  161 (268)
T ss_pred             EEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheeccc
Confidence                                                                                            


Q ss_pred             ----------CccccchhhhccCC--CCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhccccc
Q 045092          160 ----------PIVYMAPEYAKHGY--LTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC  227 (307)
Q Consensus       160 ----------t~~y~aPE~~~~~~--~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  227 (307)
                                +..|+|||++.++.  ++.++||||||+++|+|++|+.|+........   ..+.     .   ......
T Consensus       162 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~---~~~~-----~---~~~~~~  230 (268)
T cd06624         162 INPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA---AMFK-----V---GMFKIH  230 (268)
T ss_pred             CCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh---hHhh-----h---hhhccC
Confidence                      56799999987654  78999999999999999999999853221110   0000     0   011122


Q ss_pred             CCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          228 SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       228 ~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      +.++..++.++.+++.+|+ +.+|.+||++.+++..
T Consensus       231 ~~~~~~~~~~~~~li~~~l-~~~p~~Rpt~~~ll~~  265 (268)
T cd06624         231 PEIPESLSAEAKNFILRCF-EPDPDKRASAHDLLQD  265 (268)
T ss_pred             CCCCcccCHHHHHHHHHHc-CCCchhCCCHHHHHhC
Confidence            3344456668899999999 9999999999998753

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=9.2e-25  Score=205.43  Aligned_cols=157  Identities=20%  Similarity=0.271  Sum_probs=129.7

Q ss_pred             CcccCCCCeeEEEEE-EcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------------
Q 045092           94 NEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------------  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------------  159 (307)
                      -+||+|.||+||.|+ ..+...+|||.+.....+....+..||.+.++++|.|||+++|.|.++...             
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS  660 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS  660 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence            379999999999999 556778999999877777777899999999999999999999998765211             


Q ss_pred             ------------------------------------------------------------------------------Cc
Q 045092          160 ------------------------------------------------------------------------------PI  161 (307)
Q Consensus       160 ------------------------------------------------------------------------------t~  161 (307)
                                                                                                    |.
T Consensus       661 sLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTL  740 (1226)
T KOG4279|consen  661 SLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTL  740 (1226)
T ss_pred             HHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCccccccccch
Confidence                                                                                          88


Q ss_pred             cccchhhhccCC--CCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHH
Q 045092          162 VYMAPEYAKHGY--LTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTS  239 (307)
Q Consensus       162 ~y~aPE~~~~~~--~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  239 (307)
                      .|||||.+..|.  |...+|||||||++.||.||++||........      ++.  +-   ..--.-|.++.+...+..
T Consensus       741 QYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA------AMF--kV---GmyKvHP~iPeelsaeak  809 (1226)
T KOG4279|consen  741 QYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA------AMF--KV---GMYKVHPPIPEELSAEAK  809 (1226)
T ss_pred             hhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH------hhh--hh---cceecCCCCcHHHHHHHH
Confidence            999999999875  88999999999999999999999964332221      111  11   123345778888888999


Q ss_pred             HHhccccCCCCCCCCCCHHHHHH
Q 045092          240 DGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       240 ~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .++++|. .++|.+||++.+++.
T Consensus       810 ~FilrcF-epd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  810 NFILRCF-EPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             HHHHHHc-CCCcccCccHHHhcc
Confidence            9999999 999999999999975

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.90  E-value=6.6e-25  Score=208.72  Aligned_cols=167  Identities=22%  Similarity=0.305  Sum_probs=133.1

Q ss_pred             CcccCCcccCCCCeeEEEEEEc----CCCEEEEEEccCCCh-hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           89 NFASENEISERGFGPVYRGLLA----DGKVIEVKQLSSKSK-QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~----~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      ...+.++||.|.||.||+|+++    ....||||.++.... ....+|+.|+.||.+++||||++|-|+......-    
T Consensus       630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT  709 (996)
T KOG0196|consen  630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT  709 (996)
T ss_pred             heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence            3466789999999999999964    235799999987643 4456899999999999999999999987654100    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       710 EyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~y  789 (996)
T KOG0196|consen  710 EYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAY  789 (996)
T ss_pred             hhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCCccc
Confidence                                                                                            


Q ss_pred             -------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCc
Q 045092          160 -------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFG  231 (307)
Q Consensus       160 -------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~  231 (307)
                             ++.|.|||.+...+++..||||||||++||.++ |.+||-.....+       +...++.+.      .-..+
T Consensus       790 tt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd-------VIkaIe~gy------RLPpP  856 (996)
T KOG0196|consen  790 TTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-------VIKAIEQGY------RLPPP  856 (996)
T ss_pred             cccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH-------HHHHHHhcc------CCCCC
Confidence                   678999999999999999999999999999988 999996444322       222222222      12223


Q ss_pred             hhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          232 FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       232 ~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                      -+|+..+.+|++.|| +.|-.+||++.||+..|.....
T Consensus       857 mDCP~aL~qLMldCW-qkdR~~RP~F~qiV~~lDklIr  893 (996)
T KOG0196|consen  857 MDCPAALYQLMLDCW-QKDRNRRPKFAQIVSTLDKLIR  893 (996)
T ss_pred             CCCcHHHHHHHHHHH-HHHhhcCCCHHHHHHHHHHHhc
Confidence            468889999999999 9999999999999999987654

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.90  E-value=2e-23  Score=183.73  Aligned_cols=166  Identities=25%  Similarity=0.349  Sum_probs=128.8

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           86 ATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      ..++|...+.||+|+||.||+|...+++.||+|.++... ...+++.+|+.++.+++|+||+++++++......      
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   82 (261)
T cd05068           4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL   82 (261)
T ss_pred             chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence            356788889999999999999997777889999986543 3456799999999999999999999987654110      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        83 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  162 (261)
T cd05068          83 MKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEARE  162 (261)
T ss_pred             ccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccC
Confidence                                                                                            


Q ss_pred             ----CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          160 ----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       160 ----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                          +..|+|||++.+..++.++||||||++++||++ |+.||.....   ..    +...+..      ......+...
T Consensus       163 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~----~~~~~~~------~~~~~~~~~~  229 (261)
T cd05068         163 GAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN---AE----VLQQVDQ------GYRMPCPPGC  229 (261)
T ss_pred             CCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH---HH----HHHHHHc------CCCCCCCCcC
Confidence                236999999998899999999999999999999 9999853221   11    1111111      1111223345


Q ss_pred             HHHHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      +..+.+++.+|+ +.+|.+||++.++...|++
T Consensus       230 ~~~~~~li~~~l-~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         230 PKELYDIMLDCW-KEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             CHHHHHHHHHHh-hcCcccCCCHHHHHHHHhc
Confidence            568999999999 9999999999999999876

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.90  E-value=3.5e-23  Score=189.01  Aligned_cols=173  Identities=16%  Similarity=0.228  Sum_probs=126.3

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      .++|+..+.||+|+||.||++... ++..||+|.+.... ......+.+|++++.+++|+||+++++++......     
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            468999999999999999999954 78899999987542 23346799999999999999999999987654110     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  163 (331)
T cd06649          84 HMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV  163 (331)
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccCC
Confidence                                                                                            


Q ss_pred             -CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHH----------------------
Q 045092          160 -PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYL----------------------  216 (307)
Q Consensus       160 -t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~----------------------  216 (307)
                       |..|+|||++.+..++.++|||||||++|||++|+.||.......   +...+....                      
T Consensus       164 g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (331)
T cd06649         164 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE---LEAIFGRPVVDGEEGEPHSISPRPRPPGRPV  240 (331)
T ss_pred             CCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHhcccccccccCCccccCcccccccccc
Confidence             678999999998899999999999999999999999995322111   100000000                      


Q ss_pred             --------------HhhhhhcccccCCC-chhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          217 --------------KRARKLNGASCSKF-GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       217 --------------~~~~~~~~~~~~~l-~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                                    .....+.....+.. ...++.++.+++.+|+ +.||++||++.++++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L-~~~P~~Rpt~~ell~h  301 (331)
T cd06649         241 SGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCL-IKNPAERADLKMLMNH  301 (331)
T ss_pred             cccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHc-cCCcccCCCHHHHhcC
Confidence                          00000000011111 1234568899999999 9999999999999864

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.90  E-value=2.2e-23  Score=183.30  Aligned_cols=165  Identities=27%  Similarity=0.389  Sum_probs=128.8

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      .++|...++||+|+||.||+|...+++.||+|.+.... .....+.+|+.++++++|+||+++++++......       
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~   83 (260)
T cd05067           5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYME   83 (260)
T ss_pred             hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEcCC
Confidence            46788889999999999999998788999999986543 3356799999999999999999999886432100       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~  163 (260)
T cd05067          84 NGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGA  163 (260)
T ss_pred             CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCC
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 --PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 --t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                        +..|+|||++..+.++.++||||||++++||++ |+.||.......   +..    .+.      .......+...+.
T Consensus       164 ~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~----~~~------~~~~~~~~~~~~~  230 (260)
T cd05067         164 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE---VIQ----NLE------RGYRMPRPDNCPE  230 (260)
T ss_pred             cccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH---HHH----HHH------cCCCCCCCCCCCH
Confidence              346999999998899999999999999999999 999995332111   111    111      1111223344566


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      ++.+++.+|+ ..+|++||++++++..|++
T Consensus       231 ~~~~li~~~l-~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         231 ELYELMRLCW-KEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             HHHHHHHHHc-cCChhhCCCHHHHHHHhhc
Confidence            8999999999 9999999999999999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.90  E-value=6e-24  Score=196.19  Aligned_cols=160  Identities=19%  Similarity=0.295  Sum_probs=124.4

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC------
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK------  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~------  158 (307)
                      ++|.+.+.||+|+||+||||+.+ +.+.||+|.+.+..  ....+.+.+|+++++.++|||||.++++|....+      
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            56778889999999999999954 78999999987543  3346679999999999999999999988765411      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        82 ~a~g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsik  161 (808)
T KOG0597|consen   82 YAVGDLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIK  161 (808)
T ss_pred             hhhhhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceeeeecc
Confidence                                                                                            


Q ss_pred             CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHH
Q 045092          159 QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRT  238 (307)
Q Consensus       159 ~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  238 (307)
                      +|+.|||||.+.++.|+..+|.||+||++||+++|++||...      .+...+...+.      +.  +..+......+
T Consensus       162 GtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~------si~~Lv~~I~~------d~--v~~p~~~S~~f  227 (808)
T KOG0597|consen  162 GTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR------SITQLVKSILK------DP--VKPPSTASSSF  227 (808)
T ss_pred             CcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH------HHHHHHHHHhc------CC--CCCcccccHHH
Confidence            199999999999999999999999999999999999999522      22222222221      11  12223445577


Q ss_pred             HHHhccccCCCCCCCCCCHHHHHH
Q 045092          239 SDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ..+...-+ ..||..|-+-.+++.
T Consensus       228 ~nfl~gLL-~kdP~~RltW~~Ll~  250 (808)
T KOG0597|consen  228 VNFLQGLL-IKDPAQRLTWTDLLG  250 (808)
T ss_pred             HHHHHHHh-hcChhhcccHHHHhc
Confidence            77777778 999999999887764

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.90  E-value=9.2e-24  Score=182.15  Aligned_cols=174  Identities=20%  Similarity=0.282  Sum_probs=124.8

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCCh--hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSK--QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      +.|+...++|+|+||.||+++. .+|+.||||++.....  .-.+-.++||++|++++|+|+|.|+++|......     
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE   81 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE   81 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence            3467778999999999999994 5899999999975432  2345678999999999999999998766543110     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        82 ~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDY  161 (396)
T KOG0593|consen   82 YCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDY  161 (396)
T ss_pred             ecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhh
Confidence                                                                                            


Q ss_pred             --Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHH--------HHHHHhhhhhcccccC
Q 045092          160 --PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWL--------GSYLKRARKLNGASCS  228 (307)
Q Consensus       160 --t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~--------~~~~~~~~~~~~~~~~  228 (307)
                        |..|.|||.+.+ .+|...+||||.||++.||++|.+-|.+.+.-+..+++...        ...+.....+..+.-|
T Consensus       162 VATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP  241 (396)
T KOG0593|consen  162 VATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLP  241 (396)
T ss_pred             hhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecC
Confidence              889999999887 68999999999999999999999888655443333332211        1111111111111112


Q ss_pred             CC------chhhH---HHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          229 KF------GFKFY---RRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       229 ~l------~~~~~---~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ..      ...++   .-+++++..|+ +.||.+|++.+|++.
T Consensus       242 ~~~~~epLe~k~p~~s~~~ld~~k~cL-~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  242 EPEHPEPLERKYPKISNVLLDLLKKCL-KMDPDDRLSCEQLLH  283 (396)
T ss_pred             CCCCccchhhhcccchHHHHHHHHHHh-cCCccccccHHHHhc
Confidence            11      22222   26789999999 999999999998863

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.90  E-value=3e-23  Score=182.30  Aligned_cols=163  Identities=20%  Similarity=0.273  Sum_probs=124.9

Q ss_pred             cCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--------
Q 045092           88 NNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--------  159 (307)
                      ++|...+.||+|+||.||+|...++..+|||.+.... .....|.+|+.++.+++||||+++++++......        
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS   82 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence            4577788999999999999997766779999986442 3346799999999999999999999987643111        


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        83 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~  162 (256)
T cd05113          83 NGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSK  162 (256)
T ss_pred             CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCc
Confidence                                                                                            


Q ss_pred             -CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHH
Q 045092          160 -PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRR  237 (307)
Q Consensus       160 -t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  237 (307)
                       +..|++||++.++.++.++|||||||++|||++ |+.|+......   .+.   . .+..+      ..+..+...+..
T Consensus       163 ~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~---~~~---~-~~~~~------~~~~~~~~~~~~  229 (256)
T cd05113         163 FPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS---ETV---E-KVSQG------LRLYRPHLASEK  229 (256)
T ss_pred             cChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH---HHH---H-HHhcC------CCCCCCCCCCHH
Confidence             346999999998889999999999999999999 99998533211   111   1 11111      111122234568


Q ss_pred             HHHHhccccCCCCCCCCCCHHHHHHHhc
Q 045092          238 TSDGNDQCSSSVTPTNRPLMSFVVSMLE  265 (307)
Q Consensus       238 ~~~l~~~C~~~~dP~~RPs~~~vl~~L~  265 (307)
                      +.+++..|| +.+|.+||++.+++..|+
T Consensus       230 ~~~li~~cl-~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         230 VYAIMYSCW-HEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             HHHHHHHHc-CCCcccCCCHHHHHHhhC
Confidence            899999999 999999999999998764

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.90  E-value=3.5e-23  Score=185.07  Aligned_cols=168  Identities=24%  Similarity=0.341  Sum_probs=129.1

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc------CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-
Q 045092           87 TNNFASENEISERGFGPVYRGLLA------DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-  159 (307)
                      .++|.+.+.||+|+||.||++...      ++..+|+|.+..........+.+|++++.+++|+||+++++++...... 
T Consensus         4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (288)
T cd05093           4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI   83 (288)
T ss_pred             hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence            357888999999999999999841      3456899998766555667899999999999999999999887642100 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~d  163 (288)
T cd05093          84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGD  163 (288)
T ss_pred             EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEecc
Confidence                                                                                            


Q ss_pred             ---------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHH
Q 045092          160 ---------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLK  217 (307)
Q Consensus       160 ---------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~  217 (307)
                                           +..|+|||++.+..++.++|||||||+++||++ |+.||......      + ....+.
T Consensus       164 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~------~-~~~~i~  236 (288)
T cd05093         164 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN------E-VIECIT  236 (288)
T ss_pred             CCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH------H-HHHHHH
Confidence                                 336999999998889999999999999999999 89998533211      1 111111


Q ss_pred             hhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          218 RARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       218 ~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      .+      ..+..+..++..+.+++.+|+ +.||.+||++.+++..|+...
T Consensus       237 ~~------~~~~~~~~~~~~l~~li~~~l-~~~p~~Rpt~~~v~~~l~~~~  280 (288)
T cd05093         237 QG------RVLQRPRTCPKEVYDLMLGCW-QREPHMRLNIKEIHSLLQNLA  280 (288)
T ss_pred             cC------CcCCCCCCCCHHHHHHHHHHc-cCChhhCCCHHHHHHHHHHHH
Confidence            11      112223345668999999999 999999999999988887654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.90  E-value=4.7e-23  Score=181.78  Aligned_cols=167  Identities=23%  Similarity=0.299  Sum_probs=127.3

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc----CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           87 TNNFASENEISERGFGPVYRGLLA----DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      .++|+..+.||+|+||.||+|...    +...||||.++... ......|.+|+.++.+++|+||+++++++......  
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i   82 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI   82 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence            467888999999999999999964    24579999987543 33346799999999999999999999876543110  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~  162 (266)
T cd05033          83 ITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEAT  162 (266)
T ss_pred             EEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccccc
Confidence                                                                                            


Q ss_pred             --------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC
Q 045092          160 --------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF  230 (307)
Q Consensus       160 --------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l  230 (307)
                              ++.|+|||++.++.++.++||||||++++||++ |..||......   .+    ...+..+      .....
T Consensus       163 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~---~~----~~~~~~~------~~~~~  229 (266)
T cd05033         163 YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ---DV----IKAVEDG------YRLPP  229 (266)
T ss_pred             eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH---HH----HHHHHcC------CCCCC
Confidence                    356999999998899999999999999999998 99998532211   11    1111111      11112


Q ss_pred             chhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          231 GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       231 ~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      +..++..+.+++..|+ +.+|++||++.+|++.|+..
T Consensus       230 ~~~~~~~l~~li~~cl-~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         230 PMDCPSALYQLMLDCW-QKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             CCCCCHHHHHHHHHHc-CCCcccCcCHHHHHHHHHhh
Confidence            2345668899999999 99999999999999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.89  E-value=3.8e-23  Score=190.38  Aligned_cols=165  Identities=21%  Similarity=0.273  Sum_probs=121.1

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      ++|+..+.||+|+||.||+|.. .+++.||||.+.... ......+.+|++++..++|+||+++++++......      
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  153 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF  153 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence            3455568999999999999995 478999999986543 23346789999999999999999999887553100      


Q ss_pred             -----------------------------------------------------------------------------Ccc
Q 045092          160 -----------------------------------------------------------------------------PIV  162 (307)
Q Consensus       160 -----------------------------------------------------------------------------t~~  162 (307)
                                                                                                   |..
T Consensus       154 ~~~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~  233 (353)
T PLN00034        154 MDGGSLEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIA  233 (353)
T ss_pred             CCCCcccccccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccccccccccccCcc
Confidence                                                                                         668


Q ss_pred             ccchhhhcc----C-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHH
Q 045092          163 YMAPEYAKH----G-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRR  237 (307)
Q Consensus       163 y~aPE~~~~----~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  237 (307)
                      |+|||++..    + ..+.++|||||||++|||++|+.||.......   +......       +.....+.....++.+
T Consensus       234 y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~---~~~~~~~-------~~~~~~~~~~~~~~~~  303 (353)
T PLN00034        234 YMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD---WASLMCA-------ICMSQPPEAPATASRE  303 (353)
T ss_pred             ccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc---HHHHHHH-------HhccCCCCCCCccCHH
Confidence            999998753    2 23468999999999999999999996322211   1111111       1111122333456668


Q ss_pred             HHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          238 TSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       238 ~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      +.+++..|+ +.||++||++.|+++.
T Consensus       304 l~~li~~~l-~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        304 FRHFISCCL-QREPAKRWSAMQLLQH  328 (353)
T ss_pred             HHHHHHHHc-cCChhhCcCHHHHhcC
Confidence            999999999 9999999999999864

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.89  E-value=3.4e-23  Score=184.32  Aligned_cols=164  Identities=26%  Similarity=0.330  Sum_probs=124.3

Q ss_pred             CcccCCcccCCCCeeEEEEEEc------CCCEEEEEEccCCChh-cHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           89 NFASENEISERGFGPVYRGLLA------DGKVIEVKQLSSKSKQ-GNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      +|...+.||+|+||.||+|...      .+..||||.++..... ..+.+.+|+.++..++|+||+++++++......  
T Consensus         6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~   85 (283)
T cd05091           6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM   85 (283)
T ss_pred             HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence            4566789999999999999843      2478999999754332 345688999999999999999999875432000  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl  165 (283)
T cd05091          86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKI  165 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEe
Confidence                                                                                            


Q ss_pred             -----------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHH
Q 045092          160 -----------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSY  215 (307)
Q Consensus       160 -----------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~  215 (307)
                                             ++.|+|||++.++.++.++|||||||+++||++ |..|+.....      .+.. ..
T Consensus       166 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~------~~~~-~~  238 (283)
T cd05091         166 SDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN------QDVI-EM  238 (283)
T ss_pred             cccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH------HHHH-HH
Confidence                                   457999999998999999999999999999998 8888753221      1111 11


Q ss_pred             HHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          216 LKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       216 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      +..      ......+..++..+.+++..|+ +.+|.+||++.+|+..|+.
T Consensus       239 i~~------~~~~~~~~~~~~~~~~li~~cl-~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         239 IRN------RQVLPCPDDCPAWVYTLMLECW-NEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             HHc------CCcCCCCCCCCHHHHHHHHHHh-CCCcccCCCHHHHHHHhhC
Confidence            111      1122234567778999999999 9999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.89  E-value=3.4e-23  Score=184.06  Aligned_cols=169  Identities=22%  Similarity=0.352  Sum_probs=129.1

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEEcC-----CCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-
Q 045092           86 ATNNFASENEISERGFGPVYRGLLAD-----GKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-  158 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~~~-----~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-  158 (307)
                      ..++|...+.||+|+||.||+|....     +..||+|.+.... ......+.+|+.++.+++|+||+++++++..... 
T Consensus         4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~   83 (280)
T cd05043           4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP   83 (280)
T ss_pred             chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            35678888999999999999999654     6889999987542 3345678999999999999999999998765210 


Q ss_pred             ----------------------------C---------------------------------------------------
Q 045092          159 ----------------------------Q---------------------------------------------------  159 (307)
Q Consensus       159 ----------------------------~---------------------------------------------------  159 (307)
                                                  .                                                   
T Consensus        84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~  163 (280)
T cd05043          84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNAL  163 (280)
T ss_pred             CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCC
Confidence                                        0                                                   


Q ss_pred             ------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhh
Q 045092          160 ------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRAR  220 (307)
Q Consensus       160 ------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~  220 (307)
                                        +..|+|||++.+..++.++||||||+++||+++ |+.||.....   ..+.    ..+..+ 
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~~~----~~~~~~-  235 (280)
T cd05043         164 SRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP---FEMA----AYLKDG-  235 (280)
T ss_pred             cccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH---HHHH----HHHHcC-
Confidence                              235999999988889999999999999999999 9999964322   1111    111111 


Q ss_pred             hhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          221 KLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       221 ~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                           ........++..+.+++.+|+ ..+|++||++.++++.|++..
T Consensus       236 -----~~~~~~~~~~~~~~~li~~~l-~~~p~~Rps~~~~~~~l~~~~  277 (280)
T cd05043         236 -----YRLAQPINCPDELFAVMACCW-ALDPEERPSFSQLVQCLTDFH  277 (280)
T ss_pred             -----CCCCCCCcCCHHHHHHHHHHc-CCChhhCCCHHHHHHHHHHHH
Confidence                 111122334568899999999 999999999999999998753

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.89  E-value=6.1e-23  Score=180.47  Aligned_cols=165  Identities=25%  Similarity=0.359  Sum_probs=127.5

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      .++|+..+.||+|+||.||++...++..||+|.+..... ..+.|.+|+.++++++|+|++++++++......       
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~   83 (260)
T cd05070           5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYMS   83 (260)
T ss_pred             hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEecC
Confidence            356788899999999999999977788899999865432 346799999999999999999999876432100       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~  163 (260)
T cd05070          84 KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGA  163 (260)
T ss_pred             CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCC
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 --PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 --t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                        +..|+|||++.++.++.++||||||++++||++ |+.||.....   ....+   . +      .....+..+...+.
T Consensus       164 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~---~~~~~---~-~------~~~~~~~~~~~~~~  230 (260)
T cd05070         164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN---REVLE---Q-V------ERGYRMPCPQDCPI  230 (260)
T ss_pred             CCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH---HHHHH---H-H------HcCCCCCCCCcCCH
Confidence              246999999988899999999999999999999 8888853221   11111   1 1      11112223345566


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      .+.+++.+|+ ..+|.+||++.++...|+.
T Consensus       231 ~~~~li~~~l-~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         231 SLHELMLQCW-KKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             HHHHHHHHHc-ccCcccCcCHHHHHHHHhc
Confidence            8999999999 9999999999999988875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.89  E-value=6.4e-23  Score=181.03  Aligned_cols=167  Identities=22%  Similarity=0.340  Sum_probs=127.0

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CC---CEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DG---KVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~---~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      .++|+..+.||+|+||.||+|... ++   ..+|+|.+... .......+.+|+.++.+++|+||+++++++......  
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI   83 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence            457888899999999999999954 33   37999998654 233456799999999999999999999987654211  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~  163 (268)
T cd05063          84 ITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEG  163 (268)
T ss_pred             EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccccccc
Confidence                                                                                            


Q ss_pred             ---------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC
Q 045092          160 ---------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK  229 (307)
Q Consensus       160 ---------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  229 (307)
                               +..|+|||++.++.++.++|||||||++|||++ |+.||.....      .+.. ..+..+      ....
T Consensus       164 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~------~~~~-~~i~~~------~~~~  230 (268)
T cd05063         164 TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN------HEVM-KAINDG------FRLP  230 (268)
T ss_pred             ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH------HHHH-HHHhcC------CCCC
Confidence                     235999999998899999999999999999998 9999853321      1111 111111      1111


Q ss_pred             CchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          230 FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       230 l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      ....++..+.+++.+|+ +.+|++||++.+|++.|++.
T Consensus       231 ~~~~~~~~~~~li~~c~-~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         231 APMDCPSAVYQLMLQCW-QQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             CCCCCCHHHHHHHHHHc-CCCcccCcCHHHHHHHHHhh
Confidence            12345568899999999 99999999999999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.89  E-value=5.9e-23  Score=181.04  Aligned_cols=168  Identities=21%  Similarity=0.353  Sum_probs=128.1

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      ++|...+.||+|+||.||++.. .++..+|||.+....   ......+.+|+.++..++|+||+++++++.+....    
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            4688889999999999999994 578999999876432   23345789999999999999999999877643110    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~  161 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT  161 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCc
Confidence                                                                                            


Q ss_pred             -------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC-c
Q 045092          160 -------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF-G  231 (307)
Q Consensus       160 -------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l-~  231 (307)
                             +..|+|||++.+..++.++||||||+++|||++|..||..... .   .......       +.....+.+ .
T Consensus       162 ~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~---~~~~~~~-------~~~~~~~~~~~  230 (267)
T cd08229         162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-N---LYSLCKK-------IEQCDYPPLPS  230 (267)
T ss_pred             ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc-h---HHHHhhh-------hhcCCCCCCCc
Confidence                   4579999999888899999999999999999999999853221 1   1111111       112222222 2


Q ss_pred             hhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          232 FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       232 ~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      ..++..+.+++.+|+ +.+|.+||+|.+|++.+...
T Consensus       231 ~~~~~~~~~li~~~l-~~~p~~Rpt~~~i~~~~~~~  265 (267)
T cd08229         231 DHYSEELRQLVNMCI-NPDPEKRPDITYVYDVAKRM  265 (267)
T ss_pred             ccccHHHHHHHHHhc-CCCcccCCCHHHHHHHHhhh
Confidence            345668999999999 99999999999999888753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.89  E-value=5.7e-23  Score=182.57  Aligned_cols=166  Identities=25%  Similarity=0.378  Sum_probs=126.6

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEEc------CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC
Q 045092           86 ATNNFASENEISERGFGPVYRGLLA------DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK  158 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  158 (307)
                      .+++|...+.||+|+||.||+|...      .+..||+|.+.... ......|.+|+.++++++|+||+++++++.+...
T Consensus         4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (277)
T cd05036           4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP   83 (277)
T ss_pred             CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence            3577899999999999999999954      35689999886443 3344579999999999999999999987654310


Q ss_pred             C-------------------------------------------------------------------------------
Q 045092          159 Q-------------------------------------------------------------------------------  159 (307)
Q Consensus       159 ~-------------------------------------------------------------------------------  159 (307)
                      .                                                                               
T Consensus        84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~df  163 (277)
T cd05036          84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADF  163 (277)
T ss_pred             cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccC
Confidence            0                                                                               


Q ss_pred             --------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHh
Q 045092          160 --------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKR  218 (307)
Q Consensus       160 --------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~  218 (307)
                                          +..|+|||++.++.++.++|||||||+++||++ |+.||.......   +.    ..+..
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~---~~----~~~~~  236 (277)
T cd05036         164 GMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE---VM----EFVTG  236 (277)
T ss_pred             ccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HH----HHHHc
Confidence                                135999999999999999999999999999997 999986432211   11    11111


Q ss_pred             hhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhc
Q 045092          219 ARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLE  265 (307)
Q Consensus       219 ~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~  265 (307)
                            ......+..++..+.+++.+|+ +.+|++||++.+|++.|.
T Consensus       237 ------~~~~~~~~~~~~~~~~~i~~cl-~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         237 ------GGRLDPPKGCPGPVYRIMTDCW-QHTPEDRPNFATILERIQ  276 (277)
T ss_pred             ------CCcCCCCCCCCHHHHHHHHHHc-CCCcccCcCHHHHHHHhh
Confidence                  1112223445668899999999 999999999999999886

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.89  E-value=8e-23  Score=181.87  Aligned_cols=169  Identities=17%  Similarity=0.214  Sum_probs=125.7

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      ++|+..+.||+|+||.||+|.. .+++.||+|.+... .......+.+|+.++.+++|+||+++++++......      
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   80 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF   80 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence            3677789999999999999984 57889999998644 233446799999999999999999999987654110      


Q ss_pred             ---------------------------------------------------------------------------Ccccc
Q 045092          160 ---------------------------------------------------------------------------PIVYM  164 (307)
Q Consensus       160 ---------------------------------------------------------------------------t~~y~  164 (307)
                                                                                                 |..|+
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~  160 (279)
T cd06619          81 MDGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYM  160 (279)
T ss_pred             CCCCChHHhhcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCChhhc
Confidence                                                                                       66899


Q ss_pred             chhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC-chhhHHHHHHHhc
Q 045092          165 APEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF-GFKFYRRTSDGND  243 (307)
Q Consensus       165 aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~l~~  243 (307)
                      |||++.+..++.++||||||+++|+|++|+.||..................      +.....+.+ ....+.++.+++.
T Consensus       161 aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~li~  234 (279)
T cd06619         161 APERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQC------IVDEDPPVLPVGQFSEKFVHFIT  234 (279)
T ss_pred             CceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHH------HhccCCCCCCCCcCCHHHHHHHH
Confidence            999999888999999999999999999999999643322211111000010      111111222 2234557899999


Q ss_pred             cccCCCCCCCCCCHHHHHHH
Q 045092          244 QCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       244 ~C~~~~dP~~RPs~~~vl~~  263 (307)
                      +|+ +.+|++||++.++++.
T Consensus       235 ~~l-~~~P~~Rp~~~eil~~  253 (279)
T cd06619         235 QCM-RKQPKERPAPENLMDH  253 (279)
T ss_pred             HHh-hCChhhCCCHHHHhcC
Confidence            999 9999999999999764

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.89  E-value=3.8e-23  Score=192.08  Aligned_cols=169  Identities=23%  Similarity=0.276  Sum_probs=125.6

Q ss_pred             HHhcCcccCCcccCCCCeeEEEEEE------cCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhC-CCCCccceeeeeecC
Q 045092           85 AATNNFASENEISERGFGPVYRGLL------ADGKVIEVKQLSSKS-KQGNREIVNEIGMISAL-QHPNLVKLYRLCTET  156 (307)
Q Consensus        85 ~~t~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~  156 (307)
                      ...++|...+.||+|+||.||+|..      .++..||||+++... ....+.+.+|+.++..+ +||||++++|+|.+.
T Consensus        32 ~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~  111 (375)
T cd05104          32 FPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVG  111 (375)
T ss_pred             cchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC
Confidence            3356788889999999999999973      245689999987442 23445789999999999 899999999875421


Q ss_pred             CC------------------------------------------------------------------------------
Q 045092          157 LK------------------------------------------------------------------------------  158 (307)
Q Consensus       157 ~~------------------------------------------------------------------------------  158 (307)
                      ..                                                                              
T Consensus       112 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (375)
T cd05104         112 GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS  191 (375)
T ss_pred             CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence            00                                                                              


Q ss_pred             ------------------C-------------------------------------------------------------
Q 045092          159 ------------------Q-------------------------------------------------------------  159 (307)
Q Consensus       159 ------------------~-------------------------------------------------------------  159 (307)
                                        .                                                             
T Consensus       192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~  271 (375)
T cd05104         192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYV  271 (375)
T ss_pred             ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCccccc
Confidence                              0                                                             


Q ss_pred             -------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCc
Q 045092          160 -------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFG  231 (307)
Q Consensus       160 -------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~  231 (307)
                             +..|+|||++.++.++.++|||||||++|||++ |..||......  ..+    ...+..+.      .+..+
T Consensus       272 ~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~--~~~----~~~~~~~~------~~~~~  339 (375)
T cd05104         272 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD--SKF----YKMIKEGY------RMLSP  339 (375)
T ss_pred             ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch--HHH----HHHHHhCc------cCCCC
Confidence                   245999999999999999999999999999998 88888532211  111    11122111      11112


Q ss_pred             hhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          232 FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       232 ~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      ...+.++.+++..|+ +.||++||++.+|+++|+.
T Consensus       340 ~~~~~~l~~li~~cl-~~dP~~RPs~~eil~~l~~  373 (375)
T cd05104         340 ECAPSEMYDIMKSCW-DADPLKRPTFKQIVQLIEQ  373 (375)
T ss_pred             CCCCHHHHHHHHHHc-cCChhHCcCHHHHHHHHHh
Confidence            234558899999999 9999999999999999875

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.89  E-value=1.4e-22  Score=176.94  Aligned_cols=158  Identities=25%  Similarity=0.359  Sum_probs=122.2

Q ss_pred             CcccCCCCeeEEEEEEcCCCEEEEEEccCCCh-hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------------
Q 045092           94 NEISERGFGPVYRGLLADGKVIEVKQLSSKSK-QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------------  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------------  159 (307)
                      +.||+|+||.||+|...++..+|+|.+..... .....+.+|++++.+++|+||+++++++......             
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            36899999999999977889999999875433 2344789999999999999999999987654111             


Q ss_pred             ----------------------------------------------------------------------------Cccc
Q 045092          160 ----------------------------------------------------------------------------PIVY  163 (307)
Q Consensus       160 ----------------------------------------------------------------------------t~~y  163 (307)
                                                                                                  +..|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y  160 (250)
T cd05085          81 SFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKW  160 (250)
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcccc
Confidence                                                                                        3459


Q ss_pred             cchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHh
Q 045092          164 MAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGN  242 (307)
Q Consensus       164 ~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~  242 (307)
                      +|||++..+.++.++||||||+++||+++ |..||......      . ....+..      ......+..++..+.+++
T Consensus       161 ~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~------~-~~~~~~~------~~~~~~~~~~~~~~~~li  227 (250)
T cd05085         161 TAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ------Q-AREQVEK------GYRMSCPQKCPDDVYKVM  227 (250)
T ss_pred             cCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH------H-HHHHHHc------CCCCCCCCCCCHHHHHHH
Confidence            99999999999999999999999999999 99998532211      1 1111111      111222334567899999


Q ss_pred             ccccCCCCCCCCCCHHHHHHHhc
Q 045092          243 DQCSSSVTPTNRPLMSFVVSMLE  265 (307)
Q Consensus       243 ~~C~~~~dP~~RPs~~~vl~~L~  265 (307)
                      .+|+ +.+|++||++.++++.|.
T Consensus       228 ~~~l-~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         228 QRCW-DYKPENRPKFSELQKELA  249 (250)
T ss_pred             HHHc-ccCcccCCCHHHHHHHhc
Confidence            9999 999999999999998875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.89  E-value=8e-24  Score=188.80  Aligned_cols=167  Identities=22%  Similarity=0.328  Sum_probs=127.4

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-------
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-------  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-------  158 (307)
                      ..++...+.||+|+||.||++... +|...|||.+........+.+.+|+.+|.+++|||||+++|.......       
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m   95 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM   95 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence            345677899999999999999954 589999999875533336678999999999999999999995111100       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        96 Ey~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~  175 (313)
T KOG0198|consen   96 EYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKS  175 (313)
T ss_pred             eccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccccccc
Confidence                                                                                            


Q ss_pred             -------CCccccchhhhccCCCC-chhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC
Q 045092          159 -------QPIVYMAPEYAKHGYLT-DKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF  230 (307)
Q Consensus       159 -------~t~~y~aPE~~~~~~~~-~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l  230 (307)
                             +|+.|||||++.+|... .++|||||||+++||+||++||...     .....++   +..+   .....|.+
T Consensus       176 ~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-----~~~~~~~---~~ig---~~~~~P~i  244 (313)
T KOG0198|consen  176 DSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-----FEEAEAL---LLIG---REDSLPEI  244 (313)
T ss_pred             cccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-----cchHHHH---HHHh---ccCCCCCC
Confidence                   08899999999975444 5999999999999999999999642     1111111   1111   12234566


Q ss_pred             chhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhc
Q 045092          231 GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLE  265 (307)
Q Consensus       231 ~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~  265 (307)
                      +...+.+..+++..|+ +.+|+.|||+.++++.--
T Consensus       245 p~~ls~~a~~Fl~~C~-~~~p~~Rpta~eLL~hpf  278 (313)
T KOG0198|consen  245 PDSLSDEAKDFLRKCF-KRDPEKRPTAEELLEHPF  278 (313)
T ss_pred             CcccCHHHHHHHHHHh-hcCcccCcCHHHHhhChh
Confidence            7777889999999999 999999999999987643

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.89  E-value=1.3e-22  Score=178.54  Aligned_cols=169  Identities=21%  Similarity=0.380  Sum_probs=129.7

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      +++|+..+.||+|+||.||+|... +++.||+|.++..   .....+.+.+|++++.+++|+||+++++++......   
T Consensus         1 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv   80 (267)
T cd08224           1 LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIV   80 (267)
T ss_pred             CCceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            367889999999999999999965 8899999988632   223356799999999999999999999876543100   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~  160 (267)
T cd08224          81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT  160 (267)
T ss_pred             EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCC
Confidence                                                                                            


Q ss_pred             --------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCc
Q 045092          160 --------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFG  231 (307)
Q Consensus       160 --------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~  231 (307)
                              +..|+|||++.+..++.++|||||||++|+|++|+.|+....    ..+.+....       +.....+.++
T Consensus       161 ~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~~~~-------~~~~~~~~~~  229 (267)
T cd08224         161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK----MNLYSLCKK-------IEKCDYPPLP  229 (267)
T ss_pred             cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC----ccHHHHHhh-------hhcCCCCCCC
Confidence                    557999999988889999999999999999999999985322    112221111       1111112222


Q ss_pred             h-hhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          232 F-KFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       232 ~-~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      . .++..+.+++..|+ ..+|++||++.+|+++|+..
T Consensus       230 ~~~~~~~~~~~i~~cl-~~~p~~Rp~~~~il~~~~~~  265 (267)
T cd08224         230 ADHYSEELRDLVSRCI-NPDPEKRPDISYVLQVAKEM  265 (267)
T ss_pred             hhhcCHHHHHHHHHHc-CCCcccCCCHHHHHHHHHHh
Confidence            2 45668899999999 99999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.89  E-value=9.7e-23  Score=179.00  Aligned_cols=158  Identities=21%  Similarity=0.315  Sum_probs=122.1

Q ss_pred             cccCCCCeeEEEEEE---cCCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----------
Q 045092           95 EISERGFGPVYRGLL---ADGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----------  159 (307)
Q Consensus        95 ~lG~G~~g~Vy~~~~---~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----------  159 (307)
                      .||+|+||.||+|.+   .++..+|+|+++...  ....+++.+|+.++..++|+||++++|++......          
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~   81 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGP   81 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCc
Confidence            689999999999974   357889999986443  23456799999999999999999999987543100          


Q ss_pred             -------------------------------------------------------------------------------C
Q 045092          160 -------------------------------------------------------------------------------P  160 (307)
Q Consensus       160 -------------------------------------------------------------------------------t  160 (307)
                                                                                                     +
T Consensus        82 L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~  161 (257)
T cd05116          82 LNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWP  161 (257)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCC
Confidence                                                                                           2


Q ss_pred             ccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHH
Q 045092          161 IVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTS  239 (307)
Q Consensus       161 ~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  239 (307)
                      ..|+|||.+..+.++.++|||||||++|||++ |+.||.....   ..+    ...+..+      ..+..+..++.++.
T Consensus       162 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~----~~~i~~~------~~~~~~~~~~~~l~  228 (257)
T cd05116         162 VKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG---NEV----TQMIESG------ERMECPQRCPPEMY  228 (257)
T ss_pred             ccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH---HHH----HHHHHCC------CCCCCCCCCCHHHH
Confidence            57999999988889999999999999999998 9999853221   111    1112111      12334455677899


Q ss_pred             HHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          240 DGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       240 ~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      +++..|+ +.||++||++.+|...|++
T Consensus       229 ~li~~~~-~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         229 DLMKLCW-TYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             HHHHHHh-ccCchhCcCHHHHHHHHhc
Confidence            9999999 9999999999999999876

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.89  E-value=9.3e-23  Score=178.38  Aligned_cols=158  Identities=24%  Similarity=0.347  Sum_probs=121.0

Q ss_pred             CcccCCCCeeEEEEEE-cCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------------
Q 045092           94 NEISERGFGPVYRGLL-ADGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------------  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------------  159 (307)
                      +.||+|+||.||+|.. .+++.||+|.+.... ......+.+|++++++++|+||++++++|......            
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            4699999999999995 478999999876432 33456799999999999999999999987654111            


Q ss_pred             ------------------------------------------------------------------------------Cc
Q 045092          160 ------------------------------------------------------------------------------PI  161 (307)
Q Consensus       160 ------------------------------------------------------------------------------t~  161 (307)
                                                                                                    +.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~  160 (252)
T cd05084          81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPV  160 (252)
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCce
Confidence                                                                                          13


Q ss_pred             cccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHH
Q 045092          162 VYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSD  240 (307)
Q Consensus       162 ~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  240 (307)
                      .|+|||.+.++.++.++||||||+++|||++ |..|+.......       ....+      ........+..++..+.+
T Consensus       161 ~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~-------~~~~~------~~~~~~~~~~~~~~~~~~  227 (252)
T cd05084         161 KWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ-------TREAI------EQGVRLPCPELCPDAVYR  227 (252)
T ss_pred             eecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH-------HHHHH------HcCCCCCCcccCCHHHHH
Confidence            4999999999999999999999999999998 888885322111       11111      111122233455668999


Q ss_pred             HhccccCCCCCCCCCCHHHHHHHhc
Q 045092          241 GNDQCSSSVTPTNRPLMSFVVSMLE  265 (307)
Q Consensus       241 l~~~C~~~~dP~~RPs~~~vl~~L~  265 (307)
                      ++.+|+ +.+|++||++.+++++|.
T Consensus       228 li~~~l-~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         228 LMERCW-EYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             HHHHHc-CCChhhCcCHHHHHHHHh
Confidence            999999 999999999999999885

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.89  E-value=9.8e-23  Score=179.92  Aligned_cols=164  Identities=24%  Similarity=0.375  Sum_probs=125.1

Q ss_pred             cccCCcccCCCCeeEEEEEEc-C---CCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           90 FASENEISERGFGPVYRGLLA-D---GKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~~-~---~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      |.+.+.||+|+||.||+|... +   +..||||.++..  .......+.+|+..++.++|+||+++++++.....     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            566789999999999999853 2   367999998743  23345679999999999999999999987643211     


Q ss_pred             ----------------------------C---------------------------------------------------
Q 045092          159 ----------------------------Q---------------------------------------------------  159 (307)
Q Consensus       159 ----------------------------~---------------------------------------------------  159 (307)
                                                  .                                                   
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~  160 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS  160 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence                                        0                                                   


Q ss_pred             -----------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhh
Q 045092          160 -----------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARK  221 (307)
Q Consensus       160 -----------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~  221 (307)
                                       +..|+|||++....++.++||||||++++||++ |..||.....   ..+.+    .+     
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~---~~~~~----~~-----  228 (273)
T cd05035         161 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN---HEIYD----YL-----  228 (273)
T ss_pred             eeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH---HHHHH----HH-----
Confidence                             347999999988889999999999999999999 8888853321   11111    11     


Q ss_pred             hcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          222 LNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       222 ~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                       .....+..+..++..+.+++.+|+ +.||.+||++.++++.|++.
T Consensus       229 -~~~~~~~~~~~~~~~~~~li~~~l-~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         229 -RHGNRLKQPEDCLDELYDLMYSCW-RADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             -HcCCCCCCCcCCCHHHHHHHHHHc-CCChhhCcCHHHHHHHHHhh
Confidence             111122334456678999999999 99999999999999998764

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.89  E-value=5e-23  Score=182.83  Aligned_cols=167  Identities=20%  Similarity=0.337  Sum_probs=126.2

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEEc------CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC
Q 045092           86 ATNNFASENEISERGFGPVYRGLLA------DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK  158 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  158 (307)
                      .+++|+..+.||+|+||.||+|...      ++..||||.+.... .....+|.+|+.+++.++|+||+++++++.+...
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            4678999999999999999998742      24679999986432 2344578999999999999999999988754310


Q ss_pred             C-------------------------------------------------------------------------------
Q 045092          159 Q-------------------------------------------------------------------------------  159 (307)
Q Consensus       159 ~-------------------------------------------------------------------------------  159 (307)
                      .                                                                               
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~df  163 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDF  163 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCC
Confidence            0                                                                               


Q ss_pred             --------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHh
Q 045092          160 --------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKR  218 (307)
Q Consensus       160 --------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~  218 (307)
                                          ++.|+|||++.++.++.++|||||||+++||++ |..||......      .... ....
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~------~~~~-~~~~  236 (277)
T cd05062         164 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE------QVLR-FVME  236 (277)
T ss_pred             CCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH------HHHH-HHHc
Confidence                                345999999998899999999999999999999 68888533211      1111 1111


Q ss_pred             hhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          219 ARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       219 ~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      +      ..+.++...+..+.+++.+|+ +.+|++||++.+++++|++
T Consensus       237 ~------~~~~~~~~~~~~~~~li~~~l-~~~p~~Rps~~e~l~~l~~  277 (277)
T cd05062         237 G------GLLDKPDNCPDMLFELMRMCW-QYNPKMRPSFLEIISSIKE  277 (277)
T ss_pred             C------CcCCCCCCCCHHHHHHHHHHc-CCChhhCcCHHHHHHHhhC
Confidence            1      112233445668999999999 9999999999999998863

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.89  E-value=9e-24  Score=187.65  Aligned_cols=174  Identities=22%  Similarity=0.348  Sum_probs=141.7

Q ss_pred             cHHHHHHHhcCcccCCcccCCCCeeEEEEEEc------CCCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceee
Q 045092           79 HLRQIKAATNNFASENEISERGFGPVYRGLLA------DGKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYR  151 (307)
Q Consensus        79 ~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g  151 (307)
                      ...+|.....++....++-+|.||+||+|.+.      +.+.|-+|.++.. +.-....|+.|.-.+..+.|+|+.++.|
T Consensus       275 r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~  354 (563)
T KOG1024|consen  275 RLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLG  354 (563)
T ss_pred             hHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence            45677777788999999999999999999753      3456778888754 3445678999999999999999999999


Q ss_pred             eeecCCCC------------------------------------------------------------------------
Q 045092          152 LCTETLKQ------------------------------------------------------------------------  159 (307)
Q Consensus       152 ~~~~~~~~------------------------------------------------------------------------  159 (307)
                      .+.+....                                                                        
T Consensus       355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~Lq  434 (563)
T KOG1024|consen  355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQ  434 (563)
T ss_pred             EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhhee
Confidence            98775211                                                                        


Q ss_pred             --------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHH
Q 045092          160 --------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWL  212 (307)
Q Consensus       160 --------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~  212 (307)
                                                +..||+||.+.+..|+..+|||||||+||||+| |+.|+-..++.+       +
T Consensus       435 VkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE-------m  507 (563)
T KOG1024|consen  435 VKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE-------M  507 (563)
T ss_pred             EEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH-------H
Confidence                                      778999999999999999999999999999999 999996555433       4


Q ss_pred             HHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          213 GSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       213 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      ..++++|..+.      -+..|+.++..++..|| +..|++||+++|++..|.+
T Consensus       508 ~~ylkdGyRla------QP~NCPDeLf~vMacCW-allpeeRPsf~Qlv~cLse  554 (563)
T KOG1024|consen  508 EHYLKDGYRLA------QPFNCPDELFTVMACCW-ALLPEERPSFSQLVICLSE  554 (563)
T ss_pred             HHHHhccceec------CCCCCcHHHHHHHHHHH-hcCcccCCCHHHHHHHHHH
Confidence            55556554222      23468889999999999 9999999999999988875

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.89  E-value=2.7e-23  Score=185.33  Aligned_cols=174  Identities=16%  Similarity=0.210  Sum_probs=123.1

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      ++|...+.||+|+||.||++... +++.||||++....  ....+.+.+|+.++.+++|+||+++++++......     
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            46888999999999999999964 68899999986432  23346788999999999999999999877543100     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~  160 (287)
T cd07848          81 YVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTE  160 (287)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccc
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHH--------HHHHHhhhhhcccccC
Q 045092          160 ---PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWL--------GSYLKRARKLNGASCS  228 (307)
Q Consensus       160 ---t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~--------~~~~~~~~~~~~~~~~  228 (307)
                         |+.|+|||++.++.++.++|||||||++|||++|+.||......+........        ...+...........+
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (287)
T cd07848         161 YVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFP  240 (287)
T ss_pred             cccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccC
Confidence               56799999999888999999999999999999999999643221110000000        0000000000000001


Q ss_pred             CC----------chhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          229 KF----------GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       229 ~l----------~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ..          ....+..+.+++..|+ +.||++||+++++++
T Consensus       241 ~~~~~~~~~~~~~~~~s~~~~dll~~~L-~~~P~~R~s~~~~l~  283 (287)
T cd07848         241 AVNHPQSLERRYLGILSGVLLDLMKNLL-KLNPTDRYLTEQCLN  283 (287)
T ss_pred             cccCcccHHHhhhcccCHHHHHHHHHHc-cCCcccCCCHHHHhc
Confidence            10          1123447899999999 999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.89  E-value=4.7e-23  Score=184.08  Aligned_cols=163  Identities=21%  Similarity=0.238  Sum_probs=122.4

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      +|+..+.||+|+||.||++.. .+++.||||.+....   ......+.+|+.++.+++|+||+++++++.+....     
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence            367788999999999999994 578999999986432   22234688999999999999999998876543100     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~  160 (285)
T cd05631          81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRG  160 (285)
T ss_pred             ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecC
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 ---PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 ---t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                         |..|+|||++.++.++.++|||||||++|||++|+.||........   ...+...+..       ........++.
T Consensus       161 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~---~~~~~~~~~~-------~~~~~~~~~s~  230 (285)
T cd05631         161 RVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK---REEVDRRVKE-------DQEEYSEKFSE  230 (285)
T ss_pred             CCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh---HHHHHHHhhc-------ccccCCccCCH
Confidence               6789999999999999999999999999999999999964332111   1111111111       11122334566


Q ss_pred             HHHHHhccccCCCCCCCCCC-----HHHHHH
Q 045092          237 RTSDGNDQCSSSVTPTNRPL-----MSFVVS  262 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs-----~~~vl~  262 (307)
                      .+.+++..|+ +.||.+||+     ++++++
T Consensus       231 ~~~~li~~~l-~~~P~~R~~~~~~~~~~~~~  260 (285)
T cd05631         231 DAKSICRMLL-TKNPKERLGCRGNGAAGVKQ  260 (285)
T ss_pred             HHHHHHHHHh-hcCHHHhcCCCCCCHHHHhc
Confidence            8899999999 999999997     777765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.89  E-value=1.4e-22  Score=185.26  Aligned_cols=172  Identities=16%  Similarity=0.222  Sum_probs=125.2

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      .++|+..+.||+|+||.||++... ++..+|+|.+... .......+.+|++++.+++|+||++++++|.+....     
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            478999999999999999999954 6889999988654 233346799999999999999999999988764110     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~  163 (333)
T cd06650          84 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV  163 (333)
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccCC
Confidence                                                                                            


Q ss_pred             -CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHH----------------------------
Q 045092          160 -PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLD----------------------------  210 (307)
Q Consensus       160 -t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~----------------------------  210 (307)
                       +..|+|||++.+..++.++|||||||++|||++|+.||..........+..                            
T Consensus       164 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (333)
T cd06650         164 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGP  243 (333)
T ss_pred             CCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcc
Confidence             668999999998889999999999999999999999986432111000000                            


Q ss_pred             ------HHHHHHHhhhhhcccccCCCc-hhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          211 ------WLGSYLKRARKLNGASCSKFG-FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       211 ------~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                            .......  . +.....+.++ ..++.++.+++.+|+ +.||++||++.+++.
T Consensus       244 ~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~li~~~L-~~~P~~Rpt~~ell~  298 (333)
T cd06650         244 DSRPPMAIFELLD--Y-IVNEPPPKLPSGVFGAEFQDFVNKCL-IKNPAERADLKQLMV  298 (333)
T ss_pred             cccccccHHHHHH--H-HhcCCCccCCCCCcCHHHHHHHHHhc-cCCcccCcCHHHHhh
Confidence                  0000000  0 0011111111 124457889999999 999999999999975

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.89  E-value=5.6e-23  Score=183.96  Aligned_cols=169  Identities=21%  Similarity=0.325  Sum_probs=129.6

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc------CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           88 NNFASENEISERGFGPVYRGLLA------DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      .+|...+.||+|+||.||+|...      ++..+++|.+........+.+.+|+.++.+++|+||+++++++......  
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            45777899999999999999832      3456999998766655567899999999999999999999876543100  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l  164 (291)
T cd05094          85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKI  164 (291)
T ss_pred             EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEE
Confidence                                                                                            


Q ss_pred             -----------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHH
Q 045092          160 -----------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSY  215 (307)
Q Consensus       160 -----------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~  215 (307)
                                             +..|+|||++.+..++.++|||||||+++||++ |+.||.......   +    ...
T Consensus       165 ~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~----~~~  237 (291)
T cd05094         165 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE---V----IEC  237 (291)
T ss_pred             CCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---H----HHH
Confidence                                   346999999999999999999999999999999 999985432211   1    111


Q ss_pred             HHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccccc
Q 045092          216 LKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAEV  270 (307)
Q Consensus       216 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~v  270 (307)
                      +..+      ..+..+..++..+.+++.+|+ +.+|.+||++.+|+++|+.+...
T Consensus       238 ~~~~------~~~~~~~~~~~~~~~li~~~l-~~~P~~Rpt~~~v~~~l~~~~~~  285 (291)
T cd05094         238 ITQG------RVLERPRVCPKEVYDIMLGCW-QREPQQRLNIKEIYKILHALGKA  285 (291)
T ss_pred             HhCC------CCCCCCccCCHHHHHHHHHHc-ccChhhCcCHHHHHHHHHHHHhh
Confidence            1111      111223345668999999999 99999999999999999887543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.89  E-value=9.4e-23  Score=179.00  Aligned_cols=163  Identities=21%  Similarity=0.312  Sum_probs=125.2

Q ss_pred             cCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--------
Q 045092           88 NNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--------  159 (307)
                      .+|...+.||+|+||.||++...++..+|+|.+.... .....|.+|+.++.+++|+||+++++++......        
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA   82 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence            3577789999999999999997777789999986432 2345788999999999999999999876543110        


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        83 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  162 (256)
T cd05059          83 NGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTK  162 (256)
T ss_pred             CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccccCCCC
Confidence                                                                                            


Q ss_pred             -CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHH
Q 045092          160 -PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRR  237 (307)
Q Consensus       160 -t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  237 (307)
                       +..|+|||++.++.++.++||||||+++|||++ |+.||.......   ..    ..      +........+..++.+
T Consensus       163 ~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~----~~------~~~~~~~~~~~~~~~~  229 (256)
T cd05059         163 FPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE---VV----ES------VSAGYRLYRPKLAPTE  229 (256)
T ss_pred             CCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH---HH----HH------HHcCCcCCCCCCCCHH
Confidence             235999999999999999999999999999999 899885432211   11    11      1111222333446678


Q ss_pred             HHHHhccccCCCCCCCCCCHHHHHHHhc
Q 045092          238 TSDGNDQCSSSVTPTNRPLMSFVVSMLE  265 (307)
Q Consensus       238 ~~~l~~~C~~~~dP~~RPs~~~vl~~L~  265 (307)
                      +.+++.+|+ ..+|++||++.++++.|.
T Consensus       230 ~~~li~~cl-~~~p~~Rpt~~~~l~~l~  256 (256)
T cd05059         230 VYTIMYSCW-HEKPEDRPAFKKLLSQLT  256 (256)
T ss_pred             HHHHHHHHh-cCChhhCcCHHHHHHHhC
Confidence            999999999 999999999999998863

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.89  E-value=1.1e-22  Score=179.28  Aligned_cols=166  Identities=25%  Similarity=0.356  Sum_probs=126.7

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      .++|...+.||+|+||.||+|...++..||+|+++... ...+.|.+|++++.+++|+||+++++++.+....       
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~   83 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMS   83 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcCC
Confidence            45688899999999999999997666789999987532 2346789999999999999999999875432100       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~  163 (262)
T cd05071          84 KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA  163 (262)
T ss_pred             CCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccccccccCC
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 --PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 --t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                        +..|++||+..++.++.++||||||++++||++ |+.||.......       ....+.      ...........+.
T Consensus       164 ~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~-------~~~~~~------~~~~~~~~~~~~~  230 (262)
T cd05071         164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------VLDQVE------RGYRMPCPPECPE  230 (262)
T ss_pred             cccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH-------HHHHHh------cCCCCCCccccCH
Confidence              345999999998999999999999999999999 888885322111       111111      1111222344566


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      .+.+++.+|+ +.+|++||++.+++..|+..
T Consensus       231 ~l~~li~~~l-~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         231 SLHDLMCQCW-RKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             HHHHHHHHHc-cCCcccCCCHHHHHHHHHHh
Confidence            8899999999 99999999999999998763

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=1e-22  Score=180.48  Aligned_cols=161  Identities=22%  Similarity=0.314  Sum_probs=124.9

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      ++|+..+.||.|+||.||+|... +++.||+|.+.... ......+.+|+++++.++|+||+++++++.+....      
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY   80 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence            46788899999999999999954 68899999986543 33456789999999999999999999987654110      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~  160 (274)
T cd06609          81 CGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVG  160 (274)
T ss_pred             eCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccccccccccC
Confidence                                                                                            


Q ss_pred             CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchh-hHHHH
Q 045092          160 PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFK-FYRRT  238 (307)
Q Consensus       160 t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~  238 (307)
                      ++.|+|||++.+..++.++||||||+++|+|++|+.||......      .... .      +.....+.+... ++..+
T Consensus       161 ~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~------~~~~-~------~~~~~~~~~~~~~~~~~~  227 (274)
T cd06609         161 TPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM------RVLF-L------IPKNNPPSLEGNKFSKPF  227 (274)
T ss_pred             CccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH------HHHH-H------hhhcCCCCCcccccCHHH
Confidence            45699999999888999999999999999999999999643211      1111 1      111222333333 66688


Q ss_pred             HHHhccccCCCCCCCCCCHHHHHH
Q 045092          239 SDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .+++..|+ ..+|++||+++++++
T Consensus       228 ~~~l~~~l-~~~p~~Rpt~~~il~  250 (274)
T cd06609         228 KDFVSLCL-NKDPKERPSAKELLK  250 (274)
T ss_pred             HHHHHHHh-hCChhhCcCHHHHhh
Confidence            99999999 999999999999976

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.89  E-value=1.2e-22  Score=180.94  Aligned_cols=168  Identities=20%  Similarity=0.297  Sum_probs=124.3

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCC----EEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGK----VIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~----~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      ++|+..+.||+|+||.||+|.. .++.    .+++|.+.... .....++..|+..+.+++|+||++++|++......  
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i   86 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQLV   86 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEEE
Confidence            4567789999999999999995 3454    47888875432 22345788888899999999999999987543100  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        87 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~  166 (279)
T cd05111          87 TQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKY  166 (279)
T ss_pred             EEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCccc
Confidence                                                                                            


Q ss_pred             -------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCc
Q 045092          160 -------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFG  231 (307)
Q Consensus       160 -------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~  231 (307)
                             +..|+|||++.++.++.++|||||||++|||++ |+.|+......   .+    ...+..+.      .+..+
T Consensus       167 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~---~~----~~~~~~~~------~~~~~  233 (279)
T cd05111         167 FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH---EV----PDLLEKGE------RLAQP  233 (279)
T ss_pred             ccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH---HH----HHHHHCCC------cCCCC
Confidence                   357999999999999999999999999999998 99998543211   11    11122211      11112


Q ss_pred             hhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          232 FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       232 ~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                      ..++..+.+++..|+ ..+|++||++.++++.|.....
T Consensus       234 ~~~~~~~~~li~~c~-~~~p~~Rps~~el~~~l~~~~~  270 (279)
T cd05111         234 QICTIDVYMVMVKCW-MIDENVRPTFKELANEFTRMAR  270 (279)
T ss_pred             CCCCHHHHHHHHHHc-CCCcccCcCHHHHHHHHHHHHh
Confidence            234457888999999 9999999999999998877543

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.89  E-value=1.3e-22  Score=180.64  Aligned_cols=165  Identities=24%  Similarity=0.354  Sum_probs=125.0

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-----cCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC---
Q 045092           88 NNFASENEISERGFGPVYRGLL-----ADGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK---  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-----~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~---  158 (307)
                      ++|+..+.||+|+||.||+|..     .++..||+|.+.... ......+.+|+.++++++|+||+++++++.....   
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            4677789999999999999984     245789999987433 3344678999999999999999999987543200   


Q ss_pred             ----------------------------------C---------------------------------------------
Q 045092          159 ----------------------------------Q---------------------------------------------  159 (307)
Q Consensus       159 ----------------------------------~---------------------------------------------  159 (307)
                                                        .                                             
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~k  164 (283)
T cd05090          85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVK  164 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEE
Confidence                                              0                                             


Q ss_pred             ------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHH
Q 045092          160 ------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGS  214 (307)
Q Consensus       160 ------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~  214 (307)
                                              +..|+|||++.++.++.++||||||++++||++ |..||.....   ..    +..
T Consensus       165 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~---~~----~~~  237 (283)
T cd05090         165 ISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN---QE----VIE  237 (283)
T ss_pred             eccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH---HH----HHH
Confidence                                    235999999988889999999999999999999 9889853221   11    111


Q ss_pred             HHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          215 YLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       215 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      .+..      ......+..++..+.+++..|+ +.||.+||++.+|++.|..
T Consensus       238 ~~~~------~~~~~~~~~~~~~~~~li~~cl-~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         238 MVRK------RQLLPCSEDCPPRMYSLMTECW-QEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHc------CCcCCCCCCCCHHHHHHHHHHc-ccCcccCcCHHHHHHHhhc
Confidence            1111      1112233456678999999999 9999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.89  E-value=3e-22  Score=178.35  Aligned_cols=173  Identities=23%  Similarity=0.287  Sum_probs=127.2

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-----cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           88 NNFASENEISERGFGPVYRGLL-----ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      ++|...+.||+|+||.||++..     .++..||+|.+........+.|.+|++++.+++|+||+++++++......   
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            5678889999999999999974     25789999998776666667899999999999999999999876432100   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~  163 (284)
T cd05081          84 LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKE  163 (284)
T ss_pred             EEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCc
Confidence                                                                                            


Q ss_pred             ----------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccC---------cccHHHHHHHHHHhhh
Q 045092          160 ----------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKED---------KFYLLDWLGSYLKRAR  220 (307)
Q Consensus       160 ----------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~---------~~~l~~~~~~~~~~~~  220 (307)
                                +..|+|||++.++.++.++|||||||+++||++|..+........         ...+...+...+.   
T Consensus       164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  240 (284)
T cd05081         164 YYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLK---  240 (284)
T ss_pred             ceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHh---
Confidence                      124999999998899999999999999999999877653211100         0000111111111   


Q ss_pred             hhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          221 KLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       221 ~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                         .......+..++..+.+++.+|+ +.+|++|||+.+|++.|+.+
T Consensus       241 ---~~~~~~~~~~~~~~~~~li~~cl-~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         241 ---NNGRLPAPPGCPAEIYAIMKECW-NNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             ---cCCcCCCCCCCCHHHHHHHHHHc-cCChhhCCCHHHHHHHHHhc
Confidence               11111223445668999999999 99999999999999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.89  E-value=1.3e-23  Score=176.68  Aligned_cols=170  Identities=21%  Similarity=0.245  Sum_probs=132.7

Q ss_pred             hcCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           87 TNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      -++|.+.+.||+|||.-||+++ ..++..+|+|++.-...++.+..++|++..++++|||++++++++......      
T Consensus        20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y   99 (302)
T KOG2345|consen   20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY   99 (302)
T ss_pred             CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence            4568888999999999999999 678999999999877777888999999999999999999998776543210      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a  179 (302)
T KOG2345|consen  100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQA  179 (302)
T ss_pred             EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCcccc
Confidence                                                                                            


Q ss_pred             ---------------------Cccccchhhhc---cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHH
Q 045092          160 ---------------------PIVYMAPEYAK---HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSY  215 (307)
Q Consensus       160 ---------------------t~~y~aPE~~~---~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~  215 (307)
                                           |..|.|||.+.   +..+++++|||||||+||+|+.|..||+..... +.++.=.    
T Consensus       180 ~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~-GgSlaLA----  254 (302)
T KOG2345|consen  180 PIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ-GGSLALA----  254 (302)
T ss_pred             ceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc-CCeEEEe----
Confidence                                 99999999876   456899999999999999999999999643331 1111000    


Q ss_pred             HHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          216 LKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       216 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      +.    -....-|+- ..++..+.+++..|+ +.||.+||++.+++..+.+.
T Consensus       255 v~----n~q~s~P~~-~~yse~l~~lik~ml-qvdP~qRP~i~~ll~~~d~L  300 (302)
T KOG2345|consen  255 VQ----NAQISIPNS-SRYSEALHQLIKSML-QVDPNQRPTIPELLSKLDDL  300 (302)
T ss_pred             ee----ccccccCCC-CCccHHHHHHHHHHh-cCCcccCCCHHHHHHHHHhh
Confidence            00    011112222 226779999999999 99999999999999888764

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.89  E-value=1.5e-22  Score=177.44  Aligned_cols=164  Identities=23%  Similarity=0.306  Sum_probs=128.5

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      .++|+..+.||.|+||.||+|... ++.||||.+..... ..+.+.+|+.++.+++|+||+++++++.+....       
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   82 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM   82 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence            457888899999999999999864 78999999976543 567899999999999999999999987643110       


Q ss_pred             -------------------------------------------------------------------------------C
Q 045092          160 -------------------------------------------------------------------------------P  160 (307)
Q Consensus       160 -------------------------------------------------------------------------------t  160 (307)
                                                                                                     +
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~  162 (256)
T cd05039          83 AKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLP  162 (256)
T ss_pred             CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccccccCCCc
Confidence                                                                                           4


Q ss_pred             ccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHH
Q 045092          161 IVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTS  239 (307)
Q Consensus       161 ~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  239 (307)
                      ..|+|||++..+.++.++||||||++++||++ |+.||.....   ..    +...+..      ...+..+..++..+.
T Consensus       163 ~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~----~~~~~~~------~~~~~~~~~~~~~~~  229 (256)
T cd05039         163 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL---KD----VVPHVEK------GYRMEAPEGCPPEVY  229 (256)
T ss_pred             ccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH---HH----HHHHHhc------CCCCCCccCCCHHHH
Confidence            56999999998999999999999999999998 9999853221   11    1111111      111223344567899


Q ss_pred             HHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          240 DGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       240 ~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      +++.+|+ ..+|++||++.+++.+|+.
T Consensus       230 ~li~~~l-~~~p~~Rp~~~~l~~~l~~  255 (256)
T cd05039         230 KVMKDCW-ELDPAKRPTFKQLREQLAL  255 (256)
T ss_pred             HHHHHHh-ccChhhCcCHHHHHHHHhc
Confidence            9999999 9999999999999999875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.89  E-value=1.7e-22  Score=180.47  Aligned_cols=166  Identities=22%  Similarity=0.346  Sum_probs=126.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc------CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC
Q 045092           87 TNNFASENEISERGFGPVYRGLLA------DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  159 (307)
                      .++|+..+.||+|+||.||++...      ++..||+|.+.... ......+.+|+.++.+++|+||+++++++.+....
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            567899999999999999999853      46789999987543 33456799999999999999999999876543100


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~  163 (288)
T cd05050          84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLV  163 (288)
T ss_pred             EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEe
Confidence                                                                                            


Q ss_pred             -------------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCccc
Q 045092          160 -------------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFY  207 (307)
Q Consensus       160 -------------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~  207 (307)
                                                     +..|+|||.+.++.++.++|||||||++|||++ |..||.....     
T Consensus       164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~-----  238 (288)
T cd05050         164 GENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH-----  238 (288)
T ss_pred             cCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-----
Confidence                                           335999999998899999999999999999998 8888853221     


Q ss_pred             HHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          208 LLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       208 l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                       .+.. ..+..+.      ....+..++.++.+++.+|+ +.+|.+||++.|+++.|+.
T Consensus       239 -~~~~-~~~~~~~------~~~~~~~~~~~l~~li~~~l-~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         239 -EEVI-YYVRDGN------VLSCPDNCPLELYNLMRLCW-SKLPSDRPSFASINRILQR  288 (288)
T ss_pred             -HHHH-HHHhcCC------CCCCCCCCCHHHHHHHHHHc-ccCcccCCCHHHHHHHhhC
Confidence             1111 1121111      11223345668999999999 9999999999999998863

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.89  E-value=1.2e-22  Score=180.85  Aligned_cols=164  Identities=23%  Similarity=0.348  Sum_probs=126.1

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc------CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC---
Q 045092           88 NNFASENEISERGFGPVYRGLLA------DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK---  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~---  158 (307)
                      .+|....+||+|+||.||++...      ++..+|+|.+..........|.+|++++.+++|+||+++++++.....   
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM   84 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence            46777899999999999999732      356899999876666666789999999999999999999987653210   


Q ss_pred             ---------------------------------C----------------------------------------------
Q 045092          159 ---------------------------------Q----------------------------------------------  159 (307)
Q Consensus       159 ---------------------------------~----------------------------------------------  159 (307)
                                                       .                                              
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~  164 (280)
T cd05092          85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIG  164 (280)
T ss_pred             EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEEC
Confidence                                             0                                              


Q ss_pred             ----------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHH
Q 045092          160 ----------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYL  216 (307)
Q Consensus       160 ----------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~  216 (307)
                                            ++.|+|||++.++.++.++|||||||++|||++ |+.||.......      ....  
T Consensus       165 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------~~~~--  236 (280)
T cd05092         165 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE------AIEC--  236 (280)
T ss_pred             CCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH------HHHH--
Confidence                                  346999999999999999999999999999998 899985322111      1111  


Q ss_pred             HhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhc
Q 045092          217 KRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLE  265 (307)
Q Consensus       217 ~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~  265 (307)
                           .........+..++..+.+++.+|+ +.||.+||++.+|...|+
T Consensus       237 -----~~~~~~~~~~~~~~~~~~~li~~cl-~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         237 -----ITQGRELERPRTCPPEVYAIMQGCW-QREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             -----HHcCccCCCCCCCCHHHHHHHHHHc-cCChhhCCCHHHHHHHHh
Confidence                 1111112223445668899999999 999999999999998886

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.89  E-value=8.3e-23  Score=180.22  Aligned_cols=166  Identities=17%  Similarity=0.250  Sum_probs=123.8

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      .++|+..+.||+|+||.||+|.. .+++.||+|.+..........+.+|+.++.+++|+||+++++++......      
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~   87 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY   87 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence            35788899999999999999995 57889999998755444556788999999999999999999877543100      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        88 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~  167 (267)
T cd06646          88 CGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFI  167 (267)
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccccccCccc
Confidence                                                                                            


Q ss_pred             -Cccccchhhhc---cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC--chh
Q 045092          160 -PIVYMAPEYAK---HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF--GFK  233 (307)
Q Consensus       160 -t~~y~aPE~~~---~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l--~~~  233 (307)
                       +..|+|||.+.   .+.++.++|||||||+++||++|+.|+..........       .+.    ......+.+  ...
T Consensus       168 ~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~-------~~~----~~~~~~~~~~~~~~  236 (267)
T cd06646         168 GTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF-------LMS----KSNFQPPKLKDKTK  236 (267)
T ss_pred             cCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe-------eee----cCCCCCCCCccccc
Confidence             46799999874   4557889999999999999999999985332211100       000    001111111  123


Q ss_pred             hHHHHHHHhccccCCCCCCCCCCHHHHHHHh
Q 045092          234 FYRRTSDGNDQCSSSVTPTNRPLMSFVVSML  264 (307)
Q Consensus       234 ~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L  264 (307)
                      .+..+.+++.+|+ ..+|++||+++++++.|
T Consensus       237 ~~~~~~~li~~~l-~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         237 WSSTFHNFVKISL-TKNPKKRPTAERLLTHL  266 (267)
T ss_pred             cCHHHHHHHHHHh-hCChhhCcCHHHHhcCC
Confidence            4568899999999 99999999999998754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.89  E-value=1.3e-22  Score=177.50  Aligned_cols=160  Identities=21%  Similarity=0.324  Sum_probs=124.0

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      .++|+..+.||+|+||.||+|... ++..+|+|.+.....  .+.+.+|++++++++|+||+++++++.+....      
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~   79 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY   79 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence            367888999999999999999965 578999999865432  67899999999999999999999987654110      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        80 ~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~  159 (256)
T cd06612          80 CGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTV  159 (256)
T ss_pred             CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCccccccc
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC--CchhhH
Q 045092          160 --PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK--FGFKFY  235 (307)
Q Consensus       160 --t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--l~~~~~  235 (307)
                        +..|+|||++.+..++.++|||||||++++|++|+.|+.........      . .      ......+.  .+..++
T Consensus       160 ~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~------~-~------~~~~~~~~~~~~~~~~  226 (256)
T cd06612         160 IGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI------F-M------IPNKPPPTLSDPEKWS  226 (256)
T ss_pred             cCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh------h-h------hccCCCCCCCchhhcC
Confidence              45799999998888999999999999999999999999643221110      0 0      01111111  122345


Q ss_pred             HHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          236 RRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       236 ~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ..+.+++..|+ +.||++||++.+++.
T Consensus       227 ~~~~~~i~~~l-~~~P~~Rps~~~il~  252 (256)
T cd06612         227 PEFNDFVKKCL-VKDPEERPSAIQLLQ  252 (256)
T ss_pred             HHHHHHHHHHH-hcChhhCcCHHHHhc
Confidence            58899999999 999999999999975

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.89  E-value=1e-22  Score=189.04  Aligned_cols=169  Identities=24%  Similarity=0.306  Sum_probs=126.1

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEE-c-----CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhC-CCCCccceeeeeecCC
Q 045092           86 ATNNFASENEISERGFGPVYRGLL-A-----DGKVIEVKQLSSKS-KQGNREIVNEIGMISAL-QHPNLVKLYRLCTETL  157 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~-~-----~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~  157 (307)
                      ..++|+..+.||+|+||.||++.. .     ++..||||+++... ......+.+|+.++..+ +|+||++++|+|....
T Consensus        36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~  115 (374)
T cd05106          36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG  115 (374)
T ss_pred             cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence            345788899999999999999873 1     33579999997543 33345788999999999 8999999998754320


Q ss_pred             C-------------------------------------------------------------------------------
Q 045092          158 K-------------------------------------------------------------------------------  158 (307)
Q Consensus       158 ~-------------------------------------------------------------------------------  158 (307)
                      .                                                                               
T Consensus       116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (374)
T cd05106         116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS  195 (374)
T ss_pred             CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence            0                                                                               


Q ss_pred             ------------C-------------------------------------------------------------------
Q 045092          159 ------------Q-------------------------------------------------------------------  159 (307)
Q Consensus       159 ------------~-------------------------------------------------------------------  159 (307)
                                  .                                                                   
T Consensus       196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~  275 (374)
T cd05106         196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNAR  275 (374)
T ss_pred             cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCC
Confidence                        0                                                                   


Q ss_pred             -CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHH
Q 045092          160 -PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRR  237 (307)
Q Consensus       160 -t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  237 (307)
                       +..|+|||++.++.++.++|||||||++|||++ |+.||.......  .    .......      ...+..+...+.+
T Consensus       276 ~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~--~----~~~~~~~------~~~~~~~~~~~~~  343 (374)
T cd05106         276 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS--K----FYKMVKR------GYQMSRPDFAPPE  343 (374)
T ss_pred             CccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH--H----HHHHHHc------ccCccCCCCCCHH
Confidence             246999999999999999999999999999997 999985432111  1    1111111      1122222334568


Q ss_pred             HHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          238 TSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       238 ~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      +.+++..|+ +.||.+||++.+|+++|+..
T Consensus       344 l~~li~~cl-~~dp~~RPs~~~l~~~l~~~  372 (374)
T cd05106         344 IYSIMKMCW-NLEPTERPTFSQISQLIQRQ  372 (374)
T ss_pred             HHHHHHHHc-CCChhhCcCHHHHHHHHHHH
Confidence            999999999 99999999999999999864

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.89  E-value=2.2e-22  Score=177.34  Aligned_cols=162  Identities=19%  Similarity=0.344  Sum_probs=124.7

Q ss_pred             CcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCC------hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           89 NFASENEISERGFGPVYRGLLADGKVIEVKQLSSKS------KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      +|...+.||+|+||.||+|...+++.+|||.+....      ......+.+|++++++++|+||+++++++.+....   
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   80 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF   80 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence            477789999999999999997788999999886432      12235688999999999999999999987654110   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~  160 (265)
T cd06631          81 MEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGT  160 (265)
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccccc
Confidence                                                                                            


Q ss_pred             ----------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC
Q 045092          160 ----------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK  229 (307)
Q Consensus       160 ----------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  229 (307)
                                +..|+|||++.+..++.++|||||||++++|++|+.||.......     . ... ..    ......+.
T Consensus       161 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-----~-~~~-~~----~~~~~~~~  229 (265)
T cd06631         161 HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA-----A-MFY-IG----AHRGLMPR  229 (265)
T ss_pred             ccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH-----H-HHH-hh----hccCCCCC
Confidence                      446999999998889999999999999999999999995322111     0 000 00    11122344


Q ss_pred             CchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          230 FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       230 l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ++..++..+.+++.+|+ +.+|.+||++.+++.
T Consensus       230 ~~~~~~~~~~~~i~~~l-~~~p~~Rp~~~~~l~  261 (265)
T cd06631         230 LPDSFSAAAIDFVTSCL-TRDQHERPSALQLLR  261 (265)
T ss_pred             CCCCCCHHHHHHHHHHh-cCCcccCCCHHHHhc
Confidence            45567778999999999 999999999999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.89  E-value=1.3e-22  Score=185.14  Aligned_cols=171  Identities=16%  Similarity=0.276  Sum_probs=119.5

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-------
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-------  158 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-------  158 (307)
                      .|+..+.||+|+||.||+|.. .++..||||++...  .......+.+|+.++++++|+||+++++++.....       
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            377789999999999999994 47899999998643  22334578899999999999999999887643210       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        81 lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~  160 (338)
T cd07859          81 VVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA  160 (338)
T ss_pred             EEEecCCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCcc
Confidence                                                                                            


Q ss_pred             -------CCccccchhhhcc--CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHH-----------HHHh
Q 045092          159 -------QPIVYMAPEYAKH--GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGS-----------YLKR  218 (307)
Q Consensus       159 -------~t~~y~aPE~~~~--~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~-----------~~~~  218 (307)
                             +|+.|+|||++.+  +.++.++|||||||+++||++|+.||........   ...+..           .+..
T Consensus       161 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~  237 (338)
T cd07859         161 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQ---LDLITDLLGTPSPETISRVRN  237 (338)
T ss_pred             ccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHH---HHHHHHHhCCCCHHHHHHhhh
Confidence                   0567999999875  6789999999999999999999999954321110   000000           0000


Q ss_pred             h---h---hhcccccCCCc---hhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          219 A---R---KLNGASCSKFG---FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       219 ~---~---~~~~~~~~~l~---~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .   .   .+.......+.   ...+..+.+++..|+ +.||++||+++++++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l-~~~P~~Rpt~~e~l~h  290 (338)
T cd07859         238 EKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLL-AFDPKDRPTAEEALAD  290 (338)
T ss_pred             hhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHc-CcCcccCCCHHHHhcC
Confidence            0   0   00000011110   123347789999999 9999999999999863

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=5.9e-23  Score=184.09  Aligned_cols=161  Identities=14%  Similarity=0.130  Sum_probs=122.7

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      ++|...+.||+|+||.||++... +++.||+|.+....   ....+.+.+|+.++.+++||||+++++++.+...     
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            46888999999999999999954 78999999986432   2234568899999999999999999877654311     


Q ss_pred             -------------------------------------------------------------------------------C
Q 045092          159 -------------------------------------------------------------------------------Q  159 (307)
Q Consensus       159 -------------------------------------------------------------------------------~  159 (307)
                                                                                                     +
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~g  160 (291)
T cd05612          81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCG  160 (291)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCcccccC
Confidence                                                                                           0


Q ss_pred             CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHH
Q 045092          160 PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTS  239 (307)
Q Consensus       160 t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  239 (307)
                      |+.|+|||.+.+..++.++|||||||++|||++|+.||.....      .... ..+..+       ...++...+..+.
T Consensus       161 t~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~------~~~~-~~i~~~-------~~~~~~~~~~~~~  226 (291)
T cd05612         161 TPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP------FGIY-EKILAG-------KLEFPRHLDLYAK  226 (291)
T ss_pred             ChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHH-HHHHhC-------CcCCCccCCHHHH
Confidence            6789999999988899999999999999999999999964321      1111 111111       1223334556889


Q ss_pred             HHhccccCCCCCCCCCC-----HHHHHHH
Q 045092          240 DGNDQCSSSVTPTNRPL-----MSFVVSM  263 (307)
Q Consensus       240 ~l~~~C~~~~dP~~RPs-----~~~vl~~  263 (307)
                      +++..|+ +.||.+||+     +.++++.
T Consensus       227 ~li~~~l-~~dp~~R~~~~~~~~~~~l~h  254 (291)
T cd05612         227 DLIKKLL-VVDRTRRLGNMKNGADDVKNH  254 (291)
T ss_pred             HHHHHHc-CCCHHHccCCccCCHHHHhcC
Confidence            9999999 999999995     7777643

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.88  E-value=2.9e-22  Score=177.09  Aligned_cols=164  Identities=23%  Similarity=0.374  Sum_probs=123.1

Q ss_pred             cccCCcccCCCCeeEEEEEEc-CCC--EEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC------
Q 045092           90 FASENEISERGFGPVYRGLLA-DGK--VIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK------  158 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~~-~~~--~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~------  158 (307)
                      |.+.+.||+|+||.||+|... ++.  .||+|.++..  .....+.+.+|+.++.+++|+||++++++|.....      
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   80 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS   80 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence            346789999999999999964 333  5899988653  33445689999999999999999999987632100      


Q ss_pred             -------------------------C------------------------------------------------------
Q 045092          159 -------------------------Q------------------------------------------------------  159 (307)
Q Consensus       159 -------------------------~------------------------------------------------------  159 (307)
                                               .                                                      
T Consensus        81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  160 (272)
T cd05075          81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSK  160 (272)
T ss_pred             cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCccc
Confidence                                     0                                                      


Q ss_pred             ----------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhh
Q 045092          160 ----------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKL  222 (307)
Q Consensus       160 ----------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  222 (307)
                                      ++.|++||+..+..++.++||||||+++|||++ |+.||.....   ..    ....+..+.  
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---~~----~~~~~~~~~--  231 (272)
T cd05075         161 KIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN---SE----IYDYLRQGN--  231 (272)
T ss_pred             ccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH---HH----HHHHHHcCC--
Confidence                            346999999998899999999999999999999 7888853221   11    112222221  


Q ss_pred             cccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          223 NGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       223 ~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                          ....+..++..+.+++.+|+ +.||++||++.++++.|+..
T Consensus       232 ----~~~~~~~~~~~~~~li~~~l-~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         232 ----RLKQPPDCLDGLYSLMSSCW-LLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             ----CCCCCCCCCHHHHHHHHHHc-CCCcccCcCHHHHHHHHHhh
Confidence                11223345567899999999 99999999999999998763

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.88  E-value=1.3e-22  Score=177.47  Aligned_cols=161  Identities=19%  Similarity=0.300  Sum_probs=125.3

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      +|...+.||+|+||.||++.. .+++.|++|.+...  .......+.+|+.++++++|+||+++++++.+....      
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            477788999999999999995 47899999988643  334556899999999999999999999887654100      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~  160 (256)
T cd08529          81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT  160 (256)
T ss_pred             CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhc
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 ---PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 ---t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                         ++.|+|||+..++.++.++||||||++++||++|+.||.....   .   . ....      +.....+.+...++.
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~---~-~~~~------~~~~~~~~~~~~~~~  227 (256)
T cd08529         161 IVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ---G---A-LILK------IIRGVFPPVSQMYSQ  227 (256)
T ss_pred             cccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH---H---H-HHHH------HHcCCCCCCccccCH
Confidence               4679999999999999999999999999999999999963321   1   1 1111      111122333345667


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .+.+++.+|+ +.+|++||++.++++.
T Consensus       228 ~~~~~i~~~l-~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         228 QLAQLIDQCL-TKDYRQRPDTFQLLRN  253 (256)
T ss_pred             HHHHHHHHHc-cCCcccCcCHHHHhhC
Confidence            8999999999 9999999999999763

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.88  E-value=2e-22  Score=177.11  Aligned_cols=166  Identities=28%  Similarity=0.403  Sum_probs=128.8

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           86 ATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      ..++|.+.+.||+|+||.||++...+++.||||.+.... ...+.+.+|+.++++++|+||+++++++......      
T Consensus         4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   82 (261)
T cd05034           4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY   82 (261)
T ss_pred             chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence            356888899999999999999997777889999986542 3456799999999999999999999887653110      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        83 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~  162 (261)
T cd05034          83 MSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTARE  162 (261)
T ss_pred             cCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhhhhh
Confidence                                                                                            


Q ss_pred             ----CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          160 ----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       160 ----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                          +..|+|||.+.++.++.++||||||++++||++ |+.||.....   .....   . +      ........+...
T Consensus       163 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~---~~~~~---~-~------~~~~~~~~~~~~  229 (261)
T cd05034         163 GAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN---REVLE---Q-V------ERGYRMPRPPNC  229 (261)
T ss_pred             ccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHH---H-H------HcCCCCCCCCCC
Confidence                346999999998889999999999999999999 9999853221   11111   1 1      111112222344


Q ss_pred             HHHHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      +..+.+++.+|+ ..+|++||++.++...|+.
T Consensus       230 ~~~~~~~i~~~l-~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         230 PEELYDLMLQCW-DKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             CHHHHHHHHHHc-ccCcccCCCHHHHHHHHhc
Confidence            668999999999 9999999999999998875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.88  E-value=2.1e-22  Score=176.48  Aligned_cols=163  Identities=22%  Similarity=0.397  Sum_probs=124.2

Q ss_pred             cCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--------
Q 045092           88 NNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--------  159 (307)
                      .+|+..+.||+|+||.||++...++..+|+|.+.... .....|.+|++++.+++|+||+++++++......        
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   82 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME   82 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence            4677789999999999999997667899999986432 2345789999999999999999999887543100        


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        83 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~  162 (256)
T cd05112          83 HGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTK  162 (256)
T ss_pred             CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccccCCCc
Confidence                                                                                            


Q ss_pred             -CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHH
Q 045092          160 -PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRR  237 (307)
Q Consensus       160 -t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  237 (307)
                       +..|+|||++.++.++.++||||||+++|||++ |+.||.....      ...... +..+   .....   +...+..
T Consensus       163 ~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~------~~~~~~-~~~~---~~~~~---~~~~~~~  229 (256)
T cd05112         163 FPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN------SEVVET-INAG---FRLYK---PRLASQS  229 (256)
T ss_pred             cchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH------HHHHHH-HhCC---CCCCC---CCCCCHH
Confidence             246999999998899999999999999999998 9999853221      111111 1111   11111   2234568


Q ss_pred             HHHHhccccCCCCCCCCCCHHHHHHHhc
Q 045092          238 TSDGNDQCSSSVTPTNRPLMSFVVSMLE  265 (307)
Q Consensus       238 ~~~l~~~C~~~~dP~~RPs~~~vl~~L~  265 (307)
                      +.+++.+|+ +.+|++||++.++++.|.
T Consensus       230 ~~~l~~~~l-~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         230 VYELMQHCW-KERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             HHHHHHHHc-ccChhhCCCHHHHHHhhC
Confidence            999999999 999999999999998873

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.88  E-value=1.9e-22  Score=179.88  Aligned_cols=169  Identities=21%  Similarity=0.323  Sum_probs=127.6

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      ++|+..+.||+|+||.||++.. .+++.||+|.+.... ....+.+.+|++++..++|+||+++++++......      
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            5677789999999999999995 468899999876442 33456899999999999999999999887654110      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        85 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~~~  164 (284)
T cd06620          85 MDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVG  164 (284)
T ss_pred             CCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCcccc
Confidence                                                                                            


Q ss_pred             CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCc-----ccHHHHHHHHHHhhhhhcccccCCCch-h
Q 045092          160 PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDK-----FYLLDWLGSYLKRARKLNGASCSKFGF-K  233 (307)
Q Consensus       160 t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~l~~-~  233 (307)
                      +..|+|||++.++.++.++|||||||++++|++|+.||........     ..+.++......       ...+.++. .
T Consensus       165 ~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  237 (284)
T cd06620         165 TSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQ-------EPPPRLPSSD  237 (284)
T ss_pred             CcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhh-------ccCCCCCchh
Confidence            5689999999888999999999999999999999999974433211     111122211111       11222222 2


Q ss_pred             hHHHHHHHhccccCCCCCCCCCCHHHHHHHh
Q 045092          234 FYRRTSDGNDQCSSSVTPTNRPLMSFVVSML  264 (307)
Q Consensus       234 ~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L  264 (307)
                      ++..+.+++..|+ +.||++||++.+++++.
T Consensus       238 ~~~~~~~li~~~l-~~dp~~Rpt~~e~~~~~  267 (284)
T cd06620         238 FPEDLRDFVDACL-LKDPTERPTPQQLCAMP  267 (284)
T ss_pred             cCHHHHHHHHHHh-cCCcccCcCHHHHhcCc
Confidence            5668899999999 99999999999998763

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=8.5e-23  Score=186.49  Aligned_cols=169  Identities=15%  Similarity=0.163  Sum_probs=125.0

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      ++|...+.||+|+||.||+|... +++.||||+++...   ......+.+|+.++..++|+||+++++++......    
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            46888999999999999999954 68999999986432   22345788999999999999999999887654110    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~g  160 (333)
T cd05600          81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVVG  160 (333)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCccc
Confidence                                                                                            


Q ss_pred             CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHH
Q 045092          160 PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTS  239 (307)
Q Consensus       160 t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  239 (307)
                      |+.|+|||++.+..++.++|||||||++|||++|+.||......+   .   ..........+............+.++.
T Consensus       161 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~---~---~~~i~~~~~~~~~~~~~~~~~~~s~~~~  234 (333)
T cd05600         161 SPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE---T---WENLKYWKETLQRPVYDDPRFNLSDEAW  234 (333)
T ss_pred             CccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH---H---HHHHHhccccccCCCCCccccccCHHHH
Confidence            778999999999899999999999999999999999996432211   1   1111100000111100100123456888


Q ss_pred             HHhccccCCCCCCCCCCHHHHHHH
Q 045092          240 DGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       240 ~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      +++..|+ ..+|.+||++.++++.
T Consensus       235 ~li~~~l-~~~~~rr~s~~~ll~h  257 (333)
T cd05600         235 DLITKLI-NDPSRRFGSLEDIKNH  257 (333)
T ss_pred             HHHHHHh-hChhhhcCCHHHHHhC
Confidence            9999999 9999999999999865

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.88  E-value=2.9e-22  Score=179.16  Aligned_cols=165  Identities=23%  Similarity=0.318  Sum_probs=124.9

Q ss_pred             CcccCCcccCCCCeeEEEEEEc------CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC---
Q 045092           89 NFASENEISERGFGPVYRGLLA------DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK---  158 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~---  158 (307)
                      +|...+.||+|+||.||+|...      ....+|+|.+.... ......+.+|+.++..++|+||+++++.|.....   
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            4777899999999999999842      23578999886543 3345679999999999999999999876542200   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill  160 (290)
T cd05045          81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLV  160 (290)
T ss_pred             EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEE
Confidence                                                                                            


Q ss_pred             ------------------------------CCccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCccc
Q 045092          159 ------------------------------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFY  207 (307)
Q Consensus       159 ------------------------------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~  207 (307)
                                                    .+..|+|||++.+..++.++||||||++++||++ |+.||......   .
T Consensus       161 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~  237 (290)
T cd05045         161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE---R  237 (290)
T ss_pred             cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH---H
Confidence                                          0357999999988889999999999999999999 99998533211   1


Q ss_pred             HHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          208 LLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       208 l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                          +.....      .......+..++..+.+++..|+ +.+|.+||++.++++.|++.
T Consensus       238 ----~~~~~~------~~~~~~~~~~~~~~~~~~i~~cl-~~~P~~Rp~~~~i~~~l~~~  286 (290)
T cd05045         238 ----LFNLLK------TGYRMERPENCSEEMYNLMLTCW-KQEPDKRPTFADISKELEKM  286 (290)
T ss_pred             ----HHHHHh------CCCCCCCCCCCCHHHHHHHHHHc-cCCcccCCCHHHHHHHHHHH
Confidence                111211      11122234456668999999999 99999999999999999875

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.88  E-value=4.9e-23  Score=187.91  Aligned_cols=162  Identities=18%  Similarity=0.207  Sum_probs=123.9

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      .++|...+.||+|+||.||+|... +++.||||.+....   ....+.+.+|+.++.+++|+||+++++++.+....   
T Consensus        17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   96 (329)
T PTZ00263         17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL   96 (329)
T ss_pred             chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence            367888899999999999999954 78999999986432   22345789999999999999999999887654110   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        97 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~  176 (329)
T PTZ00263         97 LEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLC  176 (329)
T ss_pred             EcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcceec
Confidence                                                                                            


Q ss_pred             -CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHH
Q 045092          160 -PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRT  238 (307)
Q Consensus       160 -t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  238 (307)
                       |+.|+|||.+.+..++.++|||||||++|||++|+.||.....      .. ....+..+.       ..++..++..+
T Consensus       177 gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~------~~-~~~~i~~~~-------~~~p~~~~~~~  242 (329)
T PTZ00263        177 GTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP------FR-IYEKILAGR-------LKFPNWFDGRA  242 (329)
T ss_pred             CChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH------HH-HHHHHhcCC-------cCCCCCCCHHH
Confidence             6789999999998899999999999999999999999953221      11 111111111       12233455688


Q ss_pred             HHHhccccCCCCCCCCCC-----HHHHHHH
Q 045092          239 SDGNDQCSSSVTPTNRPL-----MSFVVSM  263 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RPs-----~~~vl~~  263 (307)
                      .+++..|+ +.||.+||+     +.+++..
T Consensus       243 ~~li~~~L-~~dP~~R~~~~~~~~~~ll~h  271 (329)
T PTZ00263        243 RDLVKGLL-QTDHTKRLGTLKGGVADVKNH  271 (329)
T ss_pred             HHHHHHHh-hcCHHHcCCCCCCCHHHHhcC
Confidence            99999999 999999996     6777643

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.88  E-value=2.3e-22  Score=178.71  Aligned_cols=171  Identities=21%  Similarity=0.312  Sum_probs=129.1

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCC----EEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGK----VIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~----~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-  159 (307)
                      .++|+..+.||+|+||.||+|.. .++.    .||+|.++... ......+.+|+.++..++|+||++++++|...... 
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l   85 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQL   85 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEE
Confidence            45678889999999999999984 3554    48999987543 33456789999999999999999999887543100 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        86 ~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~  165 (279)
T cd05109          86 VTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE  165 (279)
T ss_pred             EEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecccccce
Confidence                                                                                            


Q ss_pred             --------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC
Q 045092          160 --------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF  230 (307)
Q Consensus       160 --------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l  230 (307)
                              +..|+|||.+.++.++.++|||||||++|||++ |..|+.....   ..+..    .+..+      ..+..
T Consensus       166 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~----~~~~~------~~~~~  232 (279)
T cd05109         166 YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA---REIPD----LLEKG------ERLPQ  232 (279)
T ss_pred             eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHH----HHHCC------CcCCC
Confidence                    346999999998899999999999999999998 8999853221   11111    11111      11122


Q ss_pred             chhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccccc
Q 045092          231 GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAEVC  271 (307)
Q Consensus       231 ~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~v~  271 (307)
                      +..++..+.+++..|+ +.||+.||++.+++..|......+
T Consensus       233 ~~~~~~~~~~li~~~l-~~dp~~Rp~~~~l~~~l~~~~~~~  272 (279)
T cd05109         233 PPICTIDVYMIMVKCW-MIDSECRPRFRELVDEFSRMARDP  272 (279)
T ss_pred             CccCCHHHHHHHHHHc-CCChhhCcCHHHHHHHHHHhhcCC
Confidence            2345568899999999 999999999999999988776555

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.88  E-value=5.8e-23  Score=181.60  Aligned_cols=155  Identities=23%  Similarity=0.246  Sum_probs=120.8

Q ss_pred             hcCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      .++|+..++||+|+||+||.++ .++++.+|+|.+++..   ....+...+|..+|.+++||.||+++-.+.+....   
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV  103 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV  103 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence            4678999999999999999999 4578999999997542   23456789999999999999999998777765211   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       104 ld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~  183 (357)
T KOG0598|consen  104 LDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATR  183 (357)
T ss_pred             EeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCccc
Confidence                                                                                            


Q ss_pred             ----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhH
Q 045092          160 ----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFY  235 (307)
Q Consensus       160 ----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  235 (307)
                          |+.|||||++.+..|+..+|.||+||++|||++|.+||...+.      ..+.......       ..+..+.-.+
T Consensus       184 tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~------~~~~~~I~~~-------k~~~~p~~ls  250 (357)
T KOG0598|consen  184 TFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV------KKMYDKILKG-------KLPLPPGYLS  250 (357)
T ss_pred             cccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH------HHHHHHHhcC-------cCCCCCccCC
Confidence                8999999999999999999999999999999999999964332      2222222111       1122223345


Q ss_pred             HHHHHHhccccCCCCCCCCC
Q 045092          236 RRTSDGNDQCSSSVTPTNRP  255 (307)
Q Consensus       236 ~~~~~l~~~C~~~~dP~~RP  255 (307)
                      .+..+++..-+ +.||++|-
T Consensus       251 ~~ardll~~LL-~rdp~~RL  269 (357)
T KOG0598|consen  251 EEARDLLKKLL-KRDPRQRL  269 (357)
T ss_pred             HHHHHHHHHHh-ccCHHHhc
Confidence            57788888888 99999995

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.88  E-value=2.9e-22  Score=176.25  Aligned_cols=164  Identities=24%  Similarity=0.359  Sum_probs=126.1

Q ss_pred             cCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--------
Q 045092           88 NNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--------  159 (307)
                      ++|.....||+|+||.||++....+..+|+|.+.... ...+.+.+|++++++++|+|++++++++......        
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~   84 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMGK   84 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCCC
Confidence            4678889999999999999997666789999886432 3346789999999999999999999876433100        


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  164 (260)
T cd05069          85 GSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAK  164 (260)
T ss_pred             CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCc
Confidence                                                                                            


Q ss_pred             -CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHH
Q 045092          160 -PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRR  237 (307)
Q Consensus       160 -t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  237 (307)
                       +..|+|||+..++.++.++||||||+++|||++ |+.||......   ....    .+.      ....+..+...+..
T Consensus       165 ~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~----~~~------~~~~~~~~~~~~~~  231 (260)
T cd05069         165 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR---EVLE----QVE------RGYRMPCPQGCPES  231 (260)
T ss_pred             cchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH----HHH------cCCCCCCCcccCHH
Confidence             346999999998999999999999999999999 89998532211   1111    111      11112223345668


Q ss_pred             HHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          238 TSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       238 ~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      +.+++.+|+ ..||.+||++.+|++.|++
T Consensus       232 ~~~li~~~l-~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         232 LHELMKLCW-KKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             HHHHHHHHc-cCCcccCcCHHHHHHHHhc
Confidence            999999999 9999999999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.88  E-value=1.5e-22  Score=179.79  Aligned_cols=160  Identities=21%  Similarity=0.322  Sum_probs=123.3

Q ss_pred             cccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--------
Q 045092           90 FASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--------  159 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--------  159 (307)
                      |+..+.||+|+||.||+|.. .++..||+|.+.... ....+.+.+|+.++++++|+||+++++++......        
T Consensus         6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG   85 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence            55567899999999999985 467899999986432 33456789999999999999999999887654111        


Q ss_pred             ------------------------------------------------------------------------------Cc
Q 045092          160 ------------------------------------------------------------------------------PI  161 (307)
Q Consensus       160 ------------------------------------------------------------------------------t~  161 (307)
                                                                                                    +.
T Consensus        86 ~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  165 (277)
T cd06642          86 GGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTP  165 (277)
T ss_pred             CCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcccCcc
Confidence                                                                                          45


Q ss_pred             cccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHH
Q 045092          162 VYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDG  241 (307)
Q Consensus       162 ~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l  241 (307)
                      .|+|||++.+..++.++|||||||+++||++|+.|+.......   .   .. .      +.....+.+....+..+.++
T Consensus       166 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~---~---~~-~------~~~~~~~~~~~~~~~~~~~l  232 (277)
T cd06642         166 FWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR---V---LF-L------IPKNSPPTLEGQYSKPFKEF  232 (277)
T ss_pred             cccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh---H---Hh-h------hhcCCCCCCCcccCHHHHHH
Confidence            6999999998889999999999999999999999985322111   0   00 0      11222333444566688999


Q ss_pred             hccccCCCCCCCCCCHHHHHHH
Q 045092          242 NDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       242 ~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      +..|+ +.+|++||++.++++.
T Consensus       233 i~~~l-~~~p~~Rp~~~~il~~  253 (277)
T cd06642         233 VEACL-NKDPRFRPTAKELLKH  253 (277)
T ss_pred             HHHHc-cCCcccCcCHHHHHHh
Confidence            99999 9999999999999874

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.88  E-value=3.3e-22  Score=180.18  Aligned_cols=171  Identities=20%  Similarity=0.309  Sum_probs=127.0

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCC----EEEEEEccCCCh-hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGK----VIEVKQLSSKSK-QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~----~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-  159 (307)
                      .++|+..+.||+|+||.||+|.. .++.    .||+|.+..... .....+.+|+.++.+++|+||++++|+|...... 
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~   85 (303)
T cd05110           6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQL   85 (303)
T ss_pred             hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCcee
Confidence            34667789999999999999984 3444    579998865432 2334789999999999999999999988643100 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        86 v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~  165 (303)
T cd05110          86 VTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE  165 (303)
T ss_pred             eehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCcccc
Confidence                                                                                            


Q ss_pred             --------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC
Q 045092          160 --------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF  230 (307)
Q Consensus       160 --------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l  230 (307)
                              +..|+|||++.+..++.++|||||||++|||++ |+.|+.....   ..+    ...+..+.      ....
T Consensus       166 ~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~---~~~----~~~~~~~~------~~~~  232 (303)
T cd05110         166 YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT---REI----PDLLEKGE------RLPQ  232 (303)
T ss_pred             cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH---HHH----HHHHHCCC------CCCC
Confidence                    347999999998889999999999999999998 8999853221   111    11121111      1111


Q ss_pred             chhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccccc
Q 045092          231 GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAEVC  271 (307)
Q Consensus       231 ~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~v~  271 (307)
                      +..++..+.+++..|+ ..+|++||++.++++.|......+
T Consensus       233 ~~~~~~~~~~li~~c~-~~~p~~Rp~~~~l~~~l~~~~~~~  272 (303)
T cd05110         233 PPICTIDVYMVMVKCW-MIDADSRPKFKELAAEFSRMARDP  272 (303)
T ss_pred             CCCCCHHHHHHHHHHc-CCChhhCcCHHHHHHHHHHHHhch
Confidence            2234557889999999 999999999999999998865443

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.88  E-value=4.4e-23  Score=172.62  Aligned_cols=162  Identities=19%  Similarity=0.274  Sum_probs=129.8

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      .++|++++.||+|-||.||.|+. .++-.||+|++.+.   ..+...++.+|+++-+.|+||||+++||++.+....   
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi  100 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI  100 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence            46789999999999999999995 47889999998654   223456899999999999999999999999886211   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~  180 (281)
T KOG0580|consen  101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRK  180 (281)
T ss_pred             EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCCCCce
Confidence                                                                                            


Q ss_pred             ----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhH
Q 045092          160 ----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFY  235 (307)
Q Consensus       160 ----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  235 (307)
                          |.-|++||.+.+..++..+|+|++|++.+|++.|.+||......+       ....+..       ++-.++...+
T Consensus       181 tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e-------tYkrI~k-------~~~~~p~~is  246 (281)
T KOG0580|consen  181 TLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE-------TYKRIRK-------VDLKFPSTIS  246 (281)
T ss_pred             eeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH-------HHHHHHH-------ccccCCcccC
Confidence                889999999999999999999999999999999999996433111       1111111       1222334556


Q ss_pred             HHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          236 RRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       236 ~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ....+++..|+ ..+|.+|.+..|++..
T Consensus       247 ~~a~dlI~~ll-~~~p~~r~~l~~v~~h  273 (281)
T KOG0580|consen  247 GGAADLISRLL-VKNPIERLALTEVMDH  273 (281)
T ss_pred             hhHHHHHHHHh-ccCccccccHHHHhhh
Confidence            68899999999 9999999999998763

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.88  E-value=3e-22  Score=179.96  Aligned_cols=163  Identities=18%  Similarity=0.241  Sum_probs=125.4

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      .+|...+.||+|+||.||+|.. .++..||+|.+..........+.+|+.+++.++|+||+++++.+......       
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~   99 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence            5688889999999999999984 47889999998765555567789999999999999999999887654110       


Q ss_pred             -------------------------------------------------------------------------------C
Q 045092          160 -------------------------------------------------------------------------------P  160 (307)
Q Consensus       160 -------------------------------------------------------------------------------t  160 (307)
                                                                                                     +
T Consensus       100 ~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  179 (296)
T cd06654         100 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGT  179 (296)
T ss_pred             CCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccccccCcccCC
Confidence                                                                                           5


Q ss_pred             ccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHH
Q 045092          161 IVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSD  240 (307)
Q Consensus       161 ~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  240 (307)
                      +.|+|||++.+..++.++|||||||++|+|++|+.||.......      ........     .......+...+..+.+
T Consensus       180 ~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~------~~~~~~~~-----~~~~~~~~~~~~~~l~~  248 (296)
T cd06654         180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR------ALYLIATN-----GTPELQNPEKLSAIFRD  248 (296)
T ss_pred             ccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH------hHHHHhcC-----CCCCCCCccccCHHHHH
Confidence            67999999998889999999999999999999999996432211      11111110     00011122345567889


Q ss_pred             HhccccCCCCCCCCCCHHHHHH
Q 045092          241 GNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       241 l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ++.+|+ ..+|++||++.++++
T Consensus       249 li~~~l-~~~p~~Rpt~~eil~  269 (296)
T cd06654         249 FLNRCL-DMDVEKRGSAKELLQ  269 (296)
T ss_pred             HHHHHC-cCCcccCcCHHHHhh
Confidence            999999 999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.88  E-value=2.9e-22  Score=175.83  Aligned_cols=161  Identities=22%  Similarity=0.339  Sum_probs=122.4

Q ss_pred             CcccCCCCeeEEEEEEc-C---CCEEEEEEccCCCh-hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---------
Q 045092           94 NEISERGFGPVYRGLLA-D---GKVIEVKQLSSKSK-QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---------  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~~-~---~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---------  159 (307)
                      ++||+|+||.||+|... .   +..+|+|.+..... ...+.+.+|+++++++.|+||+++++++......         
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~   80 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLG   80 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCC
Confidence            47999999999999843 2   26899999875543 2456799999999999999999999987533100         


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~  160 (257)
T cd05060          81 PLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRW  160 (257)
T ss_pred             cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccc
Confidence                                                                                            


Q ss_pred             CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHH
Q 045092          160 PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRT  238 (307)
Q Consensus       160 t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  238 (307)
                      +..|+|||.+.++.++.++||||||+++|||++ |+.||.....   ..+...    +...      .....+..++..+
T Consensus       161 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~---~~~~~~----~~~~------~~~~~~~~~~~~l  227 (257)
T cd05060         161 PLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG---AEVIAM----LESG------ERLPRPEECPQEI  227 (257)
T ss_pred             cccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH---HHHHHH----HHcC------CcCCCCCCCCHHH
Confidence            246999999998999999999999999999998 9999854321   111111    1111      1112234456688


Q ss_pred             HHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          239 SDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      .+++.+|+ ..+|.+||++.++++.|+...
T Consensus       228 ~~li~~cl-~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         228 YSIMLSCW-KYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             HHHHHHHh-cCChhhCcCHHHHHHHHHhcc
Confidence            99999999 999999999999999998753

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.88  E-value=2e-22  Score=180.96  Aligned_cols=170  Identities=25%  Similarity=0.342  Sum_probs=128.0

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CC--CEEEEEEccCC-ChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC----
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DG--KVIEVKQLSSK-SKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK----  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~--~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~----  158 (307)
                      ++|+..+.||+|+||.||+|... ++  ..+|+|.++.. .....+.|.+|+.++.++ +||||+++++++.....    
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            57888899999999999999864 33  34789888743 334456799999999999 79999999887643200    


Q ss_pred             ----------------------------------C---------------------------------------------
Q 045092          159 ----------------------------------Q---------------------------------------------  159 (307)
Q Consensus       159 ----------------------------------~---------------------------------------------  159 (307)
                                                        .                                             
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~  161 (297)
T cd05089          82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIA  161 (297)
T ss_pred             EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEEC
Confidence                                              0                                             


Q ss_pred             -------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhh
Q 045092          160 -------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRA  219 (307)
Q Consensus       160 -------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~  219 (307)
                                         +..|+|||++..+.++.++|||||||+++||++ |+.||......      +.. ..    
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~------~~~-~~----  230 (297)
T cd05089         162 DFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA------ELY-EK----  230 (297)
T ss_pred             CcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH------HHH-HH----
Confidence                               335999999988889999999999999999998 99998543211      111 11    


Q ss_pred             hhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccccc
Q 045092          220 RKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAEVC  271 (307)
Q Consensus       220 ~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~v~  271 (307)
                        +.....+..+..++..+.+++.+|+ +.+|.+||++.++++.|......+
T Consensus       231 --~~~~~~~~~~~~~~~~~~~li~~~l-~~~p~~Rp~~~~i~~~l~~~~~~~  279 (297)
T cd05089         231 --LPQGYRMEKPRNCDDEVYELMRQCW-RDRPYERPPFAQISVQLSRMLEAR  279 (297)
T ss_pred             --HhcCCCCCCCCCCCHHHHHHHHHHc-CCChhhCcCHHHHHHHHHHHHHhh
Confidence              1111222333456668999999999 999999999999999988765544

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.88  E-value=4.1e-22  Score=175.91  Aligned_cols=161  Identities=18%  Similarity=0.235  Sum_probs=120.4

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC-----hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS-----KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      .+|...+.||+|+||.||++.. .++..||+|.+....     ......+.+|+.++++++|+||+++++++.+....  
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            4789999999999999999985 468999999886331     12345688999999999999999999876542100  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~  161 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM  161 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccc
Confidence                                                                                            


Q ss_pred             ----------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC
Q 045092          160 ----------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK  229 (307)
Q Consensus       160 ----------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  229 (307)
                                +..|+|||++.+..++.++|||||||+++||++|+.||.....      .......      ......+.
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~------~~~~~~~------~~~~~~~~  229 (266)
T cd06651         162 SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA------MAAIFKI------ATQPTNPQ  229 (266)
T ss_pred             cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch------HHHHHHH------hcCCCCCC
Confidence                      4469999999988899999999999999999999999953211      1111111      11222344


Q ss_pred             CchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          230 FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       230 l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ++...+..+..++ .|+ ..+|++||++.+|++
T Consensus       230 ~~~~~~~~~~~li-~~~-~~~p~~Rp~~~eil~  260 (266)
T cd06651         230 LPSHISEHARDFL-GCI-FVEARHRPSAEELLR  260 (266)
T ss_pred             CchhcCHHHHHHH-HHh-cCChhhCcCHHHHhc
Confidence            4444555666665 788 889999999999975

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.88  E-value=1.8e-22  Score=181.41  Aligned_cols=177  Identities=19%  Similarity=0.254  Sum_probs=132.5

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      .+|+..+.||.|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++|+||+++++++......       
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   98 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL   98 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence            4688889999999999999984 57899999998765545567889999999999999999999987654110       


Q ss_pred             -------------------------------------------------------------------------------C
Q 045092          160 -------------------------------------------------------------------------------P  160 (307)
Q Consensus       160 -------------------------------------------------------------------------------t  160 (307)
                                                                                                     +
T Consensus        99 ~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  178 (296)
T cd06655          99 AGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGT  178 (296)
T ss_pred             CCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcCCC
Confidence                                                                                           5


Q ss_pred             ccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHH
Q 045092          161 IVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSD  240 (307)
Q Consensus       161 ~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  240 (307)
                      ..|+|||.+.++.++.++|||||||++|+|++|+.||.......      .... +...    .......+..++..+.+
T Consensus       179 ~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~------~~~~-~~~~----~~~~~~~~~~~~~~~~~  247 (296)
T cd06655         179 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR------ALYL-IATN----GTPELQNPEKLSPIFRD  247 (296)
T ss_pred             ccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHH-HHhc----CCcccCCcccCCHHHHH
Confidence            57999999998889999999999999999999999996433211      1111 1100    00011112345567889


Q ss_pred             HhccccCCCCCCCCCCHHHHHH--HhcccccccccCee
Q 045092          241 GNDQCSSSVTPTNRPLMSFVVS--MLEDKAEVCSFGIV  276 (307)
Q Consensus       241 l~~~C~~~~dP~~RPs~~~vl~--~L~~~~~v~~~g~~  276 (307)
                      ++.+|+ ..||.+||++.+++.  .+....+++.....
T Consensus       248 li~~~l-~~dp~~Rpt~~~il~~~~~~~~~~~~~~~~~  284 (296)
T cd06655         248 FLNRCL-EMDVEKRGSAKELLQHPFLKLAKPLSSLTPL  284 (296)
T ss_pred             HHHHHh-hcChhhCCCHHHHhhChHhhhccccccCCcc
Confidence            999999 999999999999985  35555555554433

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.88  E-value=5e-22  Score=176.91  Aligned_cols=175  Identities=19%  Similarity=0.231  Sum_probs=124.4

Q ss_pred             ccCCcccCCCCeeEEEEEE-----cCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           91 ASENEISERGFGPVYRGLL-----ADGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        91 ~~~~~lG~G~~g~Vy~~~~-----~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      ...+.||+|+||.||++..     .++..||+|.+.... ......|.+|++++++++|+||+++++++......     
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (283)
T cd05080           7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI   86 (283)
T ss_pred             eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence            7778999999999988652     357889999987543 23456788999999999999999999987542110     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        87 ~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~  166 (283)
T cd05080          87 MEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV  166 (283)
T ss_pred             ecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchhhcc
Confidence                                                                                            


Q ss_pred             ------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhh---hhcccccCCC
Q 045092          160 ------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRAR---KLNGASCSKF  230 (307)
Q Consensus       160 ------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~l  230 (307)
                            +..|+|||.+.++.++.++||||||++++||++|..|+......- ..+............   .......+..
T Consensus       167 ~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (283)
T cd05080         167 REDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKF-EEMIGPKQGQMTVVRLIELLERGMRLPC  245 (283)
T ss_pred             CCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchh-hhhhcccccccchhhhhhhhhcCCCCCC
Confidence                  234899999998899999999999999999999999985322110 000000000000000   0011111222


Q ss_pred             chhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          231 GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       231 ~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      +..++..+.+++..|+ +.+|++||++.+++..|+..
T Consensus       246 ~~~~~~~~~~li~~cl-~~~p~~Rps~~~i~~~l~~~  281 (283)
T cd05080         246 PKNCPQEVYILMKNCW-ETEAKFRPTFRSLIPILKEM  281 (283)
T ss_pred             CCCCCHHHHHHHHHHh-ccChhhCCCHHHHHHHHHHh
Confidence            3445678999999999 99999999999999998764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.88  E-value=7.1e-22  Score=176.84  Aligned_cols=173  Identities=20%  Similarity=0.267  Sum_probs=125.0

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcC-----------------CCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccc
Q 045092           87 TNNFASENEISERGFGPVYRGLLAD-----------------GKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVK  148 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~-----------------~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~  148 (307)
                      .++|.+.+.||+|+||.||++....                 +..||+|.+.... ....+.+.+|++++.+++|+||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            4678889999999999999988431                 2458999987543 344568999999999999999999


Q ss_pred             eeeeeecCCC--------------------------------C-------------------------------------
Q 045092          149 LYRLCTETLK--------------------------------Q-------------------------------------  159 (307)
Q Consensus       149 l~g~~~~~~~--------------------------------~-------------------------------------  159 (307)
                      +++++.....                                .                                     
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili  163 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLV  163 (296)
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceee
Confidence            9987754310                                0                                     


Q ss_pred             -------------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh--CCCCCcCCCccCcc
Q 045092          160 -------------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES--GRSNVICRTKEDKF  206 (307)
Q Consensus       160 -------------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt--g~~p~~~~~~~~~~  206 (307)
                                                     ++.|+|||++.++.++.++|||||||++|||++  |..|+.....   .
T Consensus       164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~---~  240 (296)
T cd05051         164 GKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD---Q  240 (296)
T ss_pred             cCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh---H
Confidence                                           346999999998899999999999999999998  6677743221   1


Q ss_pred             cHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          207 YLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       207 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      .....+........   .......+..++.++.+++..|+ +.||.+||++.+|++.|+.
T Consensus       241 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~li~~cl-~~~p~~Rpt~~el~~~L~~  296 (296)
T cd05051         241 QVIENAGHFFRDDG---RQIYLPRPPNCPKDIYELMLECW-RRDEEDRPTFREIHLFLQR  296 (296)
T ss_pred             HHHHHHHhcccccc---ccccCCCccCCCHHHHHHHHHHh-ccChhcCCCHHHHHHHhcC
Confidence            11111111111100   01111112334568999999999 9999999999999998863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.88  E-value=2.3e-22  Score=177.71  Aligned_cols=166  Identities=23%  Similarity=0.338  Sum_probs=125.8

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CC---CEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DG---KVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~---~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      ++|...+.||+|+||.||+|... ++   ..||||.+... .......|..|+.++++++|+||+++++++.+....   
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv   83 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII   83 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence            45777899999999999999954 33   36999998754 334456899999999999999999999887654211   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~  163 (269)
T cd05065          84 TEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP  163 (269)
T ss_pred             EecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCcccc
Confidence                                                                                            


Q ss_pred             ----------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccC
Q 045092          160 ----------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCS  228 (307)
Q Consensus       160 ----------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  228 (307)
                                +..|+|||++..+.++.++|||||||+++||++ |..||......   ....+    +.      .....
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~---~~~~~----i~------~~~~~  230 (269)
T cd05065         164 TYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ---DVINA----IE------QDYRL  230 (269)
T ss_pred             ccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH---HHHHH----HH------cCCcC
Confidence                      125999999999999999999999999999887 99998543211   11111    11      11111


Q ss_pred             CCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          229 KFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       229 ~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      ..+..++..+.+++..|+ +.+|.+||++.+|+..|+..
T Consensus       231 ~~~~~~~~~~~~li~~~l-~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         231 PPPMDCPTALHQLMLDCW-QKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             CCcccCCHHHHHHHHHHc-CCChhhCcCHHHHHHHHHhh
Confidence            222345668899999999 99999999999999988763

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.88  E-value=2.1e-22  Score=177.93  Aligned_cols=164  Identities=18%  Similarity=0.282  Sum_probs=122.1

Q ss_pred             HHhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC----
Q 045092           85 AATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK----  158 (307)
Q Consensus        85 ~~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~----  158 (307)
                      .+++.|+..+.||+|+||.||+|.. .+++.||+|.+.... .....+.+|+.++.++ +|+||+++++++.....    
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   81 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence            4677888899999999999999995 468899999986543 3446788999999998 79999999998754210    


Q ss_pred             C-------------------------------------------------------------------------------
Q 045092          159 Q-------------------------------------------------------------------------------  159 (307)
Q Consensus       159 ~-------------------------------------------------------------------------------  159 (307)
                      .                                                                               
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~  161 (272)
T cd06637          82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL  161 (272)
T ss_pred             cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence            0                                                                               


Q ss_pred             ------------Cccccchhhhc-----cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhh
Q 045092          160 ------------PIVYMAPEYAK-----HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKL  222 (307)
Q Consensus       160 ------------t~~y~aPE~~~-----~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  222 (307)
                                  +..|+|||++.     ...++.++|||||||++|||++|+.|+.......     ..  ....     
T Consensus       162 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~-----~~--~~~~-----  229 (272)
T cd06637         162 DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR-----AL--FLIP-----  229 (272)
T ss_pred             ccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHH-----HH--HHHh-----
Confidence                        55799999986     3458889999999999999999999985322111     00  0000     


Q ss_pred             cccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          223 NGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       223 ~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ...........++..+.+++.+|+ ..+|.+||++.++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~li~~~l-~~~p~~Rpt~~~il~  268 (272)
T cd06637         230 RNPAPRLKSKKWSKKFQSFIESCL-VKNHSQRPTTEQLMK  268 (272)
T ss_pred             cCCCCCCCCCCcCHHHHHHHHHHc-CCChhhCCCHHHHhh
Confidence            011111112334568899999999 999999999999875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.88  E-value=1.7e-22  Score=180.82  Aligned_cols=171  Identities=12%  Similarity=0.211  Sum_probs=121.4

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      ++|...+.||+|+||.||+|... ++..||+|.++... ......+.+|+.++.+++|+||+++++++......      
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            56888999999999999999954 78899999986442 22345688999999999999999999886543100      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        85 ~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~~  164 (288)
T cd07871          85 LDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEV  164 (288)
T ss_pred             CCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccCce
Confidence                                                                                            


Q ss_pred             -Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHH-----------hhhhhcccc
Q 045092          160 -PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLK-----------RARKLNGAS  226 (307)
Q Consensus       160 -t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~-----------~~~~~~~~~  226 (307)
                       ++.|+|||.+.+ ..++.++||||+||++|||++|+.||......+.   ...+.....           ....+....
T Consensus       165 ~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (288)
T cd07871         165 VTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEE---LHLIFRLLGTPTEETWPGITSNEEFRSYL  241 (288)
T ss_pred             ecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCChHHhhccccchhhhccc
Confidence             667999998865 5689999999999999999999999964332211   111111000           000001111


Q ss_pred             cCCC--------chhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          227 CSKF--------GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       227 ~~~l--------~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .+..        ....+.+..+++..|+ +.||.+|||+.|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~dll~~mL-~~dp~~R~t~~~~l~  284 (288)
T cd07871         242 FPQYRAQPLINHAPRLDTDGIDLLSSLL-LYETKSRISAEAALR  284 (288)
T ss_pred             cCccCCCchHHhCCCCCHHHHHHHHHhc-CcCcccCCCHHHHhc
Confidence            1110        1123447889999999 999999999999975

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.88  E-value=2.6e-22  Score=192.70  Aligned_cols=168  Identities=16%  Similarity=0.166  Sum_probs=127.1

Q ss_pred             HHHHHhcCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCC-
Q 045092           82 QIKAATNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETL-  157 (307)
Q Consensus        82 el~~~t~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-  157 (307)
                      +.....++|...+.||+|+||.||++. ..+++.||||.+...  .......+.+|+.++..++|+||+++++.+.... 
T Consensus        26 ~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~  105 (496)
T PTZ00283         26 TAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDP  105 (496)
T ss_pred             cccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccc
Confidence            344456789999999999999999998 457899999998643  3344567889999999999999998764332100 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          158 --------------------------------------------------------------------------------  157 (307)
Q Consensus       158 --------------------------------------------------------------------------------  157 (307)
                                                                                                      
T Consensus       106 ~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~  185 (496)
T PTZ00283        106 RNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLG  185 (496)
T ss_pred             cCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEE
Confidence                                                                                            


Q ss_pred             --------------------CCCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHH
Q 045092          158 --------------------KQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLK  217 (307)
Q Consensus       158 --------------------~~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~  217 (307)
                                          .+|+.|+|||++.++.++.++|||||||++|||++|+.||....      ..+.+.....
T Consensus       186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~------~~~~~~~~~~  259 (496)
T PTZ00283        186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN------MEEVMHKTLA  259 (496)
T ss_pred             ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHhc
Confidence                                00677999999999999999999999999999999999995322      1121211111


Q ss_pred             hhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          218 RARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       218 ~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                       +      ....++..++.++.+++..|+ +.||.+||++.+++++
T Consensus       260 -~------~~~~~~~~~~~~l~~li~~~L-~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        260 -G------RYDPLPPSISPEMQEIVTALL-SSDPKRRPSSSKLLNM  297 (496)
T ss_pred             -C------CCCCCCCCCCHHHHHHHHHHc-ccChhhCcCHHHHHhC
Confidence             1      112234456678999999999 9999999999998764

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.88  E-value=4e-22  Score=174.91  Aligned_cols=162  Identities=25%  Similarity=0.310  Sum_probs=125.7

Q ss_pred             cCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--------
Q 045092           88 NNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--------  159 (307)
                      ++|...+.||+|+||.||++... +..||+|.++...  ..+.|.+|+.++++++|+|++++++++......        
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~   82 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   82 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence            57888899999999999999864 7889999986432  346799999999999999999999876432110        


Q ss_pred             -------------------------------------------------------------------------------C
Q 045092          160 -------------------------------------------------------------------------------P  160 (307)
Q Consensus       160 -------------------------------------------------------------------------------t  160 (307)
                                                                                                     +
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  162 (256)
T cd05082          83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP  162 (256)
T ss_pred             CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccCCCCccc
Confidence                                                                                           4


Q ss_pred             ccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHH
Q 045092          161 IVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTS  239 (307)
Q Consensus       161 ~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  239 (307)
                      ..|+|||++..+.++.++|||||||++|||++ |+.|+....      +.+.. ..+.      ....+.....++..+.
T Consensus       163 ~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~------~~~~~-~~~~------~~~~~~~~~~~~~~~~  229 (256)
T cd05082         163 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP------LKDVV-PRVE------KGYKMDAPDGCPPVVY  229 (256)
T ss_pred             eeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC------HHHHH-HHHh------cCCCCCCCCCCCHHHH
Confidence            46999999998899999999999999999998 999985321      11111 1111      1112233345667899


Q ss_pred             HHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          240 DGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       240 ~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      +++.+|+ +.+|++||++.++++.|+.
T Consensus       230 ~li~~~l-~~~p~~Rpt~~~l~~~l~~  255 (256)
T cd05082         230 DVMKQCW-HLDAATRPSFLQLREQLEH  255 (256)
T ss_pred             HHHHHHh-cCChhhCcCHHHHHHHHhc
Confidence            9999999 9999999999999999875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.88  E-value=2.8e-22  Score=177.66  Aligned_cols=166  Identities=23%  Similarity=0.382  Sum_probs=127.2

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc------CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC
Q 045092           87 TNNFASENEISERGFGPVYRGLLA------DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  159 (307)
                      .++|...+.||+|+||.||+|...      .+..||+|.+.... ......+.+|+.++..++|+||+++++++......
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   84 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT   84 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence            467888999999999999999853      23689999986543 23345789999999999999999999875433100


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg  164 (277)
T cd05032          85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFG  164 (277)
T ss_pred             EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcc
Confidence                                                                                            


Q ss_pred             -------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhh
Q 045092          160 -------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRA  219 (307)
Q Consensus       160 -------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~  219 (307)
                                         +..|+|||.+.++.++.++|||||||+++|+++ |+.||.......   +..    ...  
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~~~----~~~--  235 (277)
T cd05032         165 MTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE---VLK----FVI--  235 (277)
T ss_pred             cchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH---HHH----HHh--
Confidence                               356999999998899999999999999999998 899985322211   111    111  


Q ss_pred             hhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          220 RKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       220 ~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                          ....+.++..++..+.+++..|+ +.+|++||++.+++..|++
T Consensus       236 ----~~~~~~~~~~~~~~~~~li~~~l-~~~p~~Rpt~~~l~~~l~~  277 (277)
T cd05032         236 ----DGGHLDLPENCPDKLLELMRMCW-QYNPKMRPTFLEIVSSLKD  277 (277)
T ss_pred             ----cCCCCCCCCCCCHHHHHHHHHHc-CCChhhCCCHHHHHHHhcC
Confidence                11122334456778999999999 9999999999999998863

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.88  E-value=4.1e-22  Score=177.05  Aligned_cols=161  Identities=21%  Similarity=0.318  Sum_probs=126.2

Q ss_pred             CcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           89 NFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      .|+..+.||.|+||.||+|... ++..||||.+... .......+.+|+.++++++|+||+++++++.+....       
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence            4667789999999999999954 6889999998643 234456799999999999999999999987654110       


Q ss_pred             -------------------------------------------------------------------------------C
Q 045092          160 -------------------------------------------------------------------------------P  160 (307)
Q Consensus       160 -------------------------------------------------------------------------------t  160 (307)
                                                                                                     +
T Consensus        85 ~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  164 (277)
T cd06640          85 GGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGT  164 (277)
T ss_pred             CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccccCc
Confidence                                                                                           5


Q ss_pred             ccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHH
Q 045092          161 IVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSD  240 (307)
Q Consensus       161 ~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  240 (307)
                      ..|+|||++.++.++.++|||||||+++||++|+.|+........      .. .      +.....+.+...++..+.+
T Consensus       165 ~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~------~~-~------~~~~~~~~~~~~~~~~~~~  231 (277)
T cd06640         165 PFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV------LF-L------IPKNNPPTLTGEFSKPFKE  231 (277)
T ss_pred             ccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH------hh-h------hhcCCCCCCchhhhHHHHH
Confidence            569999999888899999999999999999999999854322110      00 0      1112234455567778999


Q ss_pred             HhccccCCCCCCCCCCHHHHHHH
Q 045092          241 GNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       241 l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ++..|+ +.+|++||++.+++..
T Consensus       232 li~~~l-~~~p~~Rp~~~~il~~  253 (277)
T cd06640         232 FIDACL-NKDPSFRPTAKELLKH  253 (277)
T ss_pred             HHHHHc-ccCcccCcCHHHHHhC
Confidence            999999 9999999999999764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.88  E-value=3e-22  Score=177.04  Aligned_cols=167  Identities=23%  Similarity=0.332  Sum_probs=127.5

Q ss_pred             cCcccCCcccCCCCeeEEEEEEcC----CCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           88 NNFASENEISERGFGPVYRGLLAD----GKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~~----~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      ++|...+.||+|+||.||+|...+    ...||||...... ....+.+.+|+.++++++|+||+++++++.+....   
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv~   85 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIVM   85 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEEE
Confidence            457788999999999999998532    3468999887554 44556899999999999999999999986543100   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        86 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~  165 (270)
T cd05056          86 ELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKA  165 (270)
T ss_pred             EcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccccceec
Confidence                                                                                            


Q ss_pred             -----CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchh
Q 045092          160 -----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFK  233 (307)
Q Consensus       160 -----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  233 (307)
                           +..|+|||.+....++.++||||||++++|+++ |+.||......+   .   .. .+..      ......+..
T Consensus       166 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~---~---~~-~~~~------~~~~~~~~~  232 (270)
T cd05056         166 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND---V---IG-RIEN------GERLPMPPN  232 (270)
T ss_pred             CCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH---H---HH-HHHc------CCcCCCCCC
Confidence                 246999999988889999999999999999996 999985433211   1   11 1111      111223345


Q ss_pred             hHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          234 FYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       234 ~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      ++..+.+++.+|+ ..+|.+||++.+++..|.+..
T Consensus       233 ~~~~~~~li~~~l-~~~P~~Rpt~~~~~~~l~~~~  266 (270)
T cd05056         233 CPPTLYSLMTKCW-AYDPSKRPRFTELKAQLSDIL  266 (270)
T ss_pred             CCHHHHHHHHHHc-CCChhhCcCHHHHHHHHHHHH
Confidence            6678999999999 999999999999999988754

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=3.2e-22  Score=175.84  Aligned_cols=163  Identities=17%  Similarity=0.198  Sum_probs=125.0

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC-----hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS-----KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      ++|...+.||+|+||.||++.. .+++.||+|.+....     ......+.+|++++.+++|+||+++++++.+....  
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            5799999999999999999984 478999999876432     11235688999999999999999999987654110  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~  161 (263)
T cd06625          82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSG  161 (263)
T ss_pred             EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccccc
Confidence                                                                                            


Q ss_pred             --------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCc
Q 045092          160 --------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFG  231 (307)
Q Consensus       160 --------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~  231 (307)
                              +..|+|||++.+..++.++||||||+++|||++|+.||.....     ... ....      ......+.++
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~-~~~~------~~~~~~~~~~  229 (263)
T cd06625         162 TGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA-----MAA-IFKI------ATQPTNPQLP  229 (263)
T ss_pred             ccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch-----HHH-HHHH------hccCCCCCCC
Confidence                    2469999999988899999999999999999999999853211     110 1110      1111223344


Q ss_pred             hhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          232 FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       232 ~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ..++..+.+++..|+ ..+|.+||++.++++.
T Consensus       230 ~~~~~~~~~li~~~l-~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         230 SHVSPDARNFLRRTF-VENAKKRPSAEELLRH  260 (263)
T ss_pred             ccCCHHHHHHHHHHh-hcCcccCCCHHHHhhC
Confidence            556678999999999 9999999999999764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.88  E-value=8.3e-22  Score=176.72  Aligned_cols=172  Identities=19%  Similarity=0.271  Sum_probs=122.9

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcC---------------CCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCcccee
Q 045092           87 TNNFASENEISERGFGPVYRGLLAD---------------GKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLY  150 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~---------------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~  150 (307)
                      .++|...+.||+|+||.||++....               ...||+|.++.. .......|.+|++++.+++|+||++++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~   83 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL   83 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence            3578888999999999999987431               235899998754 233345799999999999999999999


Q ss_pred             eeeecCCCC-----------------------------------------------------------------------
Q 045092          151 RLCTETLKQ-----------------------------------------------------------------------  159 (307)
Q Consensus       151 g~~~~~~~~-----------------------------------------------------------------------  159 (307)
                      +++......                                                                       
T Consensus        84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~  163 (295)
T cd05097          84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVG  163 (295)
T ss_pred             EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEc
Confidence            876432100                                                                       


Q ss_pred             ------------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh--CCCCCcCCCccCccc
Q 045092          160 ------------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES--GRSNVICRTKEDKFY  207 (307)
Q Consensus       160 ------------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt--g~~p~~~~~~~~~~~  207 (307)
                                                    +..|+|||++.++.++.++|||||||+++||++  |..||.....   ..
T Consensus       164 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~---~~  240 (295)
T cd05097         164 NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD---EQ  240 (295)
T ss_pred             CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh---HH
Confidence                                          346999999999999999999999999999998  5566643221   11


Q ss_pred             HHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhc
Q 045092          208 LLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLE  265 (307)
Q Consensus       208 l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~  265 (307)
                      ............   ........+...+..+.+++.+|+ +.+|++||++.+|++.|.
T Consensus       241 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~~l-~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         241 VIENTGEFFRNQ---GRQIYLSQTPLCPSPVFKLMMRCW-SRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             HHHHHHHhhhhc---cccccCCCCCCCCHHHHHHHHHHc-CCCchhCcCHHHHHHHHh
Confidence            111111111110   011111122235568999999999 999999999999999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.88  E-value=4.4e-22  Score=174.95  Aligned_cols=160  Identities=23%  Similarity=0.251  Sum_probs=118.2

Q ss_pred             CcccCCCCeeEEEEEEc----CCCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---------
Q 045092           94 NEISERGFGPVYRGLLA----DGKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---------  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~~----~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---------  159 (307)
                      +.||+|+||.||+|...    ++..||||.+... .....+.+.+|+.+++.++|+||+++++++......         
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            46899999999999842    2357999998543 334456889999999999999999999977532100         


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  160 (262)
T cd05058          81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHT  160 (262)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccc
Confidence                                                                                            


Q ss_pred             ----CccccchhhhccCCCCchhHHHHHHHHHHHHHhC-CCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          160 ----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESG-RSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       160 ----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg-~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                          +..|+|||++.++.++.++|||||||++|||++| ..|+....   .   .+.... +      .....+..+..+
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~---~---~~~~~~-~------~~~~~~~~~~~~  227 (262)
T cd05058         161 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD---S---FDITVY-L------LQGRRLLQPEYC  227 (262)
T ss_pred             cCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC---H---HHHHHH-H------hcCCCCCCCCcC
Confidence                2359999999988999999999999999999995 55553211   1   111111 1      111122223345


Q ss_pred             HHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      +..+.+++..|+ +.+|++||++.+|++.|+..
T Consensus       228 ~~~~~~li~~cl-~~~p~~Rp~~~~il~~l~~~  259 (262)
T cd05058         228 PDPLYEVMLSCW-HPKPEMRPTFSELVSRIEQI  259 (262)
T ss_pred             CHHHHHHHHHHc-CCChhhCCCHHHHHHHHHHH
Confidence            568899999999 99999999999999998864

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.88  E-value=4.1e-22  Score=176.00  Aligned_cols=167  Identities=22%  Similarity=0.330  Sum_probs=126.3

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-C---CCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-D---GKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~---~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      .++|...+.||+|+||.||+|... +   +..+|+|.++... ....+.|.+|+.++.+++||||+++++++......  
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   82 (267)
T cd05066           3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMI   82 (267)
T ss_pred             HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            357888899999999999999853 2   3379999986542 33456899999999999999999999987654111  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~  162 (267)
T cd05066          83 VTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA  162 (267)
T ss_pred             EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccce
Confidence                                                                                            


Q ss_pred             ---------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC
Q 045092          160 ---------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK  229 (307)
Q Consensus       160 ---------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  229 (307)
                               +..|+|||++.++.++.++||||||++++|+++ |+.||......+   +..    .+..      .....
T Consensus       163 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~---~~~----~~~~------~~~~~  229 (267)
T cd05066         163 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD---VIK----AIEE------GYRLP  229 (267)
T ss_pred             eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH---HHH----HHhC------CCcCC
Confidence                     235999999998899999999999999999887 999986433211   111    1111      11112


Q ss_pred             CchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          230 FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       230 l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      .....+..+.+++.+|+ +.+|.+||+|.++++.|...
T Consensus       230 ~~~~~~~~~~~li~~~l-~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         230 APMDCPAALHQLMLDCW-QKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             CCCCCCHHHHHHHHHHc-ccCchhCCCHHHHHHHHHhh
Confidence            22345568899999999 99999999999999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.88  E-value=5.5e-22  Score=185.24  Aligned_cols=168  Identities=13%  Similarity=0.104  Sum_probs=119.3

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-------
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-------  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-------  158 (307)
                      .++|...+.||+|+||.||++.. .+++.||+|....      ..+.+|++++++++||||+++++++.....       
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~  164 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR  164 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence            36799999999999999999994 4789999997532      356789999999999999999997654310       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       165 ~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~  244 (391)
T PHA03212        165 YKTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWA  244 (391)
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccccccccccccc
Confidence                                                                                            


Q ss_pred             CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcc----cHHHHHHH-------------------H
Q 045092          159 QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKF----YLLDWLGS-------------------Y  215 (307)
Q Consensus       159 ~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~----~l~~~~~~-------------------~  215 (307)
                      +|+.|+|||++.++.++.++|||||||++|||++|+.|+.........    .....+..                   .
T Consensus       245 gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~  324 (391)
T PHA03212        245 GTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEI  324 (391)
T ss_pred             CccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHH
Confidence            078899999999999999999999999999999999887543211110    00000000                   0


Q ss_pred             HHhhhhhcccccCC----C--chhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          216 LKRARKLNGASCSK----F--GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       216 ~~~~~~~~~~~~~~----l--~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      +.... ......+.    .  ....+.++.+++.+|+ +.||.+|||+.|+++
T Consensus       325 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL-~~dP~~Rpta~elL~  375 (391)
T PHA03212        325 YIGLA-KKSSRKPGSRPLWTNLYELPIDLEYLICKML-AFDAHHRPSAEALLD  375 (391)
T ss_pred             HHHHH-hccCCCCCCCCCHHHHhhhhhhHHHHHHHHh-cCChhhCCCHHHHhc
Confidence            00000 00000000    0  0123447889999999 999999999999985

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.88  E-value=1.5e-22  Score=181.02  Aligned_cols=172  Identities=23%  Similarity=0.337  Sum_probs=128.3

Q ss_pred             HHHHhcCcccCCcccCCCCeeEEEEEEc------CCCEEEEEEccCC-ChhcHHHHHHHHHHHhhC-CCCCccceeeeee
Q 045092           83 IKAATNNFASENEISERGFGPVYRGLLA------DGKVIEVKQLSSK-SKQGNREIVNEIGMISAL-QHPNLVKLYRLCT  154 (307)
Q Consensus        83 l~~~t~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~  154 (307)
                      +....++|+..+.||+|+||.||++...      ....+|+|.+... .......+.+|+.++.++ +|+||+++++++.
T Consensus         7 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   86 (293)
T cd05053           7 WELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT   86 (293)
T ss_pred             cccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc
Confidence            3444567888899999999999999853      2367999998753 233445789999999999 8999999998754


Q ss_pred             cCCCC---------------------------------------------------------------------------
Q 045092          155 ETLKQ---------------------------------------------------------------------------  159 (307)
Q Consensus       155 ~~~~~---------------------------------------------------------------------------  159 (307)
                      .....                                                                           
T Consensus        87 ~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~  166 (293)
T cd05053          87 QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVT  166 (293)
T ss_pred             CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEc
Confidence            32100                                                                           


Q ss_pred             ------------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccH
Q 045092          160 ------------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYL  208 (307)
Q Consensus       160 ------------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l  208 (307)
                                                    +..|+|||++.+..++.++|||||||++|||++ |..|+......     
T Consensus       167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----  241 (293)
T cd05053         167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE-----  241 (293)
T ss_pred             CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH-----
Confidence                                          346999999988899999999999999999998 88888532211     


Q ss_pred             HHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          209 LDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                       + +...+..      ...+..+..++..+.+++.+|+ ..||.+||++.++++.|+++.
T Consensus       242 -~-~~~~~~~------~~~~~~~~~~~~~~~~li~~~l-~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         242 -E-LFKLLKE------GYRMEKPQNCTQELYHLMRDCW-HEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             -H-HHHHHHc------CCcCCCCCCCCHHHHHHHHHHc-ccCcccCcCHHHHHHHHHHhh
Confidence             1 1111111      1112233345568999999999 999999999999999998754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.88  E-value=4.1e-22  Score=175.29  Aligned_cols=165  Identities=25%  Similarity=0.350  Sum_probs=127.4

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      .++|...+.||+|+||.||++....+..+|+|.+... ....+.|.+|++++++++|+||+++++++......       
T Consensus         5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~~   83 (260)
T cd05073           5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMA   83 (260)
T ss_pred             ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEeCC
Confidence            4678889999999999999999777788999988654 23456799999999999999999998886542100       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~  163 (260)
T cd05073          84 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGA  163 (260)
T ss_pred             CCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCC
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 --PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 --t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                        +..|+|||++..+.++.++|||||||+++++++ |+.||......   .+.    ..+..+      .........+.
T Consensus       164 ~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~---~~~----~~~~~~------~~~~~~~~~~~  230 (260)
T cd05073         164 KFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP---EVI----RALERG------YRMPRPENCPE  230 (260)
T ss_pred             cccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH---HHH----HHHhCC------CCCCCcccCCH
Confidence              245999999998889999999999999999999 89998532211   111    111111      11122234566


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      .+.+++.+|+ +.+|++||++.+++..|+.
T Consensus       231 ~~~~~i~~~l-~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         231 ELYNIMMRCW-KNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             HHHHHHHHHc-ccCcccCcCHHHHHHHHhc
Confidence            8999999999 9999999999999999875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.88  E-value=4.8e-22  Score=179.17  Aligned_cols=167  Identities=23%  Similarity=0.289  Sum_probs=126.2

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE------cCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC
Q 045092           87 TNNFASENEISERGFGPVYRGLL------ADGKVIEVKQLSSKS-KQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~  158 (307)
                      .++|...+.||+|+||.||++..      ..+..||||.++... ....+.+.+|+.+++++ +|+||+++++++.....
T Consensus        34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  113 (302)
T cd05055          34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP  113 (302)
T ss_pred             HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence            46788899999999999999973      134579999987543 23345789999999999 89999999998764411


Q ss_pred             C-------------------------------------------------------------------------------
Q 045092          159 Q-------------------------------------------------------------------------------  159 (307)
Q Consensus       159 ~-------------------------------------------------------------------------------  159 (307)
                      .                                                                               
T Consensus       114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~  193 (302)
T cd05055         114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMN  193 (302)
T ss_pred             eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccccC
Confidence            0                                                                               


Q ss_pred             ------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccc
Q 045092          160 ------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGAS  226 (307)
Q Consensus       160 ------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  226 (307)
                                  +..|+|||.+.++.++.++|||||||++|||++ |..||.......      ........      ..
T Consensus       194 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~------~~~~~~~~------~~  261 (302)
T cd05055         194 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS------KFYKLIKE------GY  261 (302)
T ss_pred             CCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH------HHHHHHHc------CC
Confidence                        245999999999999999999999999999998 999985332111      01111111      11


Q ss_pred             cCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          227 CSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       227 ~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      .+..+...+.++.+++.+|+ ..+|++||++.++++.|..
T Consensus       262 ~~~~~~~~~~~~~~li~~cl-~~~p~~Rpt~~ell~~l~~  300 (302)
T cd05055         262 RMAQPEHAPAEIYDIMKTCW-DADPLKRPTFKQIVQLIGK  300 (302)
T ss_pred             cCCCCCCCCHHHHHHHHHHc-CCCchhCcCHHHHHHHHHh
Confidence            11222334568999999999 9999999999999999876

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.88  E-value=7.3e-22  Score=177.83  Aligned_cols=170  Identities=16%  Similarity=0.239  Sum_probs=120.9

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh-hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK-QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      .++|...+.||+|+||.||+|... +++.||||.+..... .....+.+|+.++++++|+||+++++++.+....     
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            478999999999999999999954 789999999864432 2234678899999999999999999887654110     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        84 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~  163 (303)
T cd07869          84 YVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNE  163 (303)
T ss_pred             CCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCCC
Confidence                                                                                            


Q ss_pred             --Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHh-hh----------hhccc
Q 045092          160 --PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKR-AR----------KLNGA  225 (307)
Q Consensus       160 --t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~-~~----------~~~~~  225 (307)
                        |+.|+|||.+.+ ..++.++||||+||+++||++|+.||.....     ..+.+...... +.          .....
T Consensus       164 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (303)
T cd07869         164 VVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKD-----IQDQLERIFLVLGTPNEDTWPGVHSLPHF  238 (303)
T ss_pred             cccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCcc-----HHHHHHHHHHHhCCCChhhccchhhcccc
Confidence              567999998865 4588999999999999999999999964321     11111111100 00          00000


Q ss_pred             --------ccCCCch-----hhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          226 --------SCSKFGF-----KFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       226 --------~~~~l~~-----~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                              ....+..     .....+.+++..|+ +.||.+|||+.++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL-~~dp~~R~s~~~~l~  287 (303)
T cd07869         239 KPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLL-QCFPKNRLSAQAALS  287 (303)
T ss_pred             ccccccccCCccHHHHhhccCCChHHHHHHHHHh-ccCchhccCHHHHhc
Confidence                    0000000     11236778999999 999999999999975

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.88  E-value=5e-22  Score=174.77  Aligned_cols=159  Identities=18%  Similarity=0.296  Sum_probs=121.2

Q ss_pred             cccCCCCeeEEEEEEc---CCCEEEEEEccCCCh-hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----------
Q 045092           95 EISERGFGPVYRGLLA---DGKVIEVKQLSSKSK-QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----------  159 (307)
Q Consensus        95 ~lG~G~~g~Vy~~~~~---~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----------  159 (307)
                      .||+|+||.||+|.+.   .+..||+|.+..... ...+.|.+|+.++.+++|+||+++++++......           
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L   81 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPL   81 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCH
Confidence            4899999999999853   355799999875532 3346799999999999999999999987543100           


Q ss_pred             -------------------------------------------------------------------------------C
Q 045092          160 -------------------------------------------------------------------------------P  160 (307)
Q Consensus       160 -------------------------------------------------------------------------------t  160 (307)
                                                                                                     +
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~  161 (257)
T cd05115          82 NKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWP  161 (257)
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCC
Confidence                                                                                           2


Q ss_pred             ccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHH
Q 045092          161 IVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTS  239 (307)
Q Consensus       161 ~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  239 (307)
                      ..|+|||++.++.++.++|||||||++||+++ |+.||......      + +...+..      ...+..+..++.++.
T Consensus       162 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~------~-~~~~~~~------~~~~~~~~~~~~~l~  228 (257)
T cd05115         162 LKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP------E-VMSFIEQ------GKRLDCPAECPPEMY  228 (257)
T ss_pred             cccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH------H-HHHHHHC------CCCCCCCCCCCHHHH
Confidence            56999999998889999999999999999996 99998643221      1 1111111      112233445567899


Q ss_pred             HHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          240 DGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       240 ~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      +++..|| ..+|++||++.+|.+.|+..
T Consensus       229 ~li~~c~-~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         229 ALMKDCW-IYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             HHHHHHc-CCChhhCcCHHHHHHHHhhh
Confidence            9999999 99999999999999988763

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.88  E-value=1.4e-21  Score=174.54  Aligned_cols=171  Identities=19%  Similarity=0.261  Sum_probs=124.9

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCCh-hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSK-QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      ++|+..+.||.|++|.||++.. .+++.+|+|.+..... .....+.+|++++++++|+||++++++|.+....      
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            4688889999999999999996 4688999999875432 3456799999999999999999999877432100      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~  160 (287)
T cd06621          81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA  160 (287)
T ss_pred             EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccccc
Confidence                                                                                            


Q ss_pred             -----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhccc-ccCCCchh
Q 045092          160 -----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGA-SCSKFGFK  233 (307)
Q Consensus       160 -----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~l~~~  233 (307)
                           +..|+|||.+.++.++.++||||||+++|+|++|+.|+....... ....+.... +.... .... .++.....
T Consensus       161 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~-~~~~~-~~~~~~~~~~~~~  237 (287)
T cd06621         161 GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPP-LGPIELLSY-IVNMP-NPELKDEPGNGIK  237 (287)
T ss_pred             ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCC-CChHHHHHH-HhcCC-chhhccCCCCCCc
Confidence                 567999999998899999999999999999999999996442211 111111111 11101 0001 01111123


Q ss_pred             hHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          234 FYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       234 ~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .+..+.+++..|+ ..+|.+||++.|+++
T Consensus       238 ~~~~~~~li~~~l-~~~p~~Rpt~~eil~  265 (287)
T cd06621         238 WSEEFKDFIKQCL-EKDPTRRPTPWDMLE  265 (287)
T ss_pred             hHHHHHHHHHHHc-CCCcccCCCHHHHHh
Confidence            4568899999999 999999999999976

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.87  E-value=6.6e-22  Score=172.76  Aligned_cols=158  Identities=26%  Similarity=0.371  Sum_probs=121.5

Q ss_pred             CcccCCCCeeEEEEEEcCCCEEEEEEccCCChh-cHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------------
Q 045092           94 NEISERGFGPVYRGLLADGKVIEVKQLSSKSKQ-GNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------------  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------------  159 (307)
                      +.||+|+||.||++...+++.||+|.+...... ....+.+|++++++++|+||+++++++.+....             
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            469999999999999766899999998754333 456899999999999999999999887654211             


Q ss_pred             -----------------------------------------------------------------------------Ccc
Q 045092          160 -----------------------------------------------------------------------------PIV  162 (307)
Q Consensus       160 -----------------------------------------------------------------------------t~~  162 (307)
                                                                                                   +..
T Consensus        81 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~  160 (251)
T cd05041          81 TFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIK  160 (251)
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceec
Confidence                                                                                         234


Q ss_pred             ccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHH
Q 045092          163 YMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDG  241 (307)
Q Consensus       163 y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l  241 (307)
                      |+|||.+.++.++.++|||||||+++||++ |..||.......   .    ...+      ........+...+..+.++
T Consensus       161 y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~---~----~~~~------~~~~~~~~~~~~~~~~~~l  227 (251)
T cd05041         161 WTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ---T----RERI------ESGYRMPAPQLCPEEIYRL  227 (251)
T ss_pred             cCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH---H----HHHH------hcCCCCCCCccCCHHHHHH
Confidence            999999998899999999999999999999 888885332111   1    1111      1111112233456689999


Q ss_pred             hccccCCCCCCCCCCHHHHHHHhc
Q 045092          242 NDQCSSSVTPTNRPLMSFVVSMLE  265 (307)
Q Consensus       242 ~~~C~~~~dP~~RPs~~~vl~~L~  265 (307)
                      +.+|+ ..+|.+||++.++++.|.
T Consensus       228 i~~~l-~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         228 MLQCW-AYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             HHHHh-ccChhhCcCHHHHHHHhh
Confidence            99999 999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=6.3e-23  Score=190.23  Aligned_cols=160  Identities=22%  Similarity=0.352  Sum_probs=126.4

Q ss_pred             cccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCCChh---cHHHHHHHHHHHhhCCCCCccceeeeeecCCC-------
Q 045092           90 FASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQ---GNREIVNEIGMISALQHPNLVKLYRLCTETLK-------  158 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-------  158 (307)
                      |...+.||.|+||.||.++ ..+...||||++.-..++   ...++++|+..|.+++|||+|.+.|+|.....       
T Consensus        28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY  107 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY  107 (948)
T ss_pred             HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence            5666889999999999999 558899999999855444   34578999999999999999999998865410       


Q ss_pred             ----------------------------------------------------------------------------CCcc
Q 045092          159 ----------------------------------------------------------------------------QPIV  162 (307)
Q Consensus       159 ----------------------------------------------------------------------------~t~~  162 (307)
                                                                                                  +||+
T Consensus       108 ClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGTPy  187 (948)
T KOG0577|consen  108 CLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGTPY  187 (948)
T ss_pred             HhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCchhcccCCcc
Confidence                                                                                        1999


Q ss_pred             ccchhhhc---cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCch-hhHHHH
Q 045092          163 YMAPEYAK---HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGF-KFYRRT  238 (307)
Q Consensus       163 y~aPE~~~---~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~  238 (307)
                      |||||++.   .|.|+.|+||||+||+..||.-.++|+...+....      +..       +...-.|.|.. .....+
T Consensus       188 wMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSA------LYH-------IAQNesPtLqs~eWS~~F  254 (948)
T KOG0577|consen  188 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LYH-------IAQNESPTLQSNEWSDYF  254 (948)
T ss_pred             ccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHH------HHH-------HHhcCCCCCCCchhHHHH
Confidence            99999874   79999999999999999999999999864432221      111       23333455543 345589


Q ss_pred             HHHhccccCCCCCCCCCCHHHHHHH
Q 045092          239 SDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ..++-.|+ +.-|.+|||..+++..
T Consensus       255 ~~Fvd~CL-qKipqeRptse~ll~H  278 (948)
T KOG0577|consen  255 RNFVDSCL-QKIPQERPTSEELLKH  278 (948)
T ss_pred             HHHHHHHH-hhCcccCCcHHHHhhc
Confidence            99999999 9999999999987653

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.87  E-value=2.9e-22  Score=183.55  Aligned_cols=168  Identities=23%  Similarity=0.313  Sum_probs=125.7

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-c-----CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhC-CCCCccceeeeeecCC-
Q 045092           87 TNNFASENEISERGFGPVYRGLL-A-----DGKVIEVKQLSSKS-KQGNREIVNEIGMISAL-QHPNLVKLYRLCTETL-  157 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~-----~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~-  157 (307)
                      .++|.+.+.||+|+||.||+|.. .     +++.||+|+++... ....+.+.+|+.++.++ +|+||++++++|.... 
T Consensus         6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~   85 (337)
T cd05054           6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG   85 (337)
T ss_pred             HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence            35688889999999999999963 1     35789999987432 23345688899999999 8999999998764210 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          158 --------------------------------------------------------------------------------  157 (307)
Q Consensus       158 --------------------------------------------------------------------------------  157 (307)
                                                                                                      
T Consensus        86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (337)
T cd05054          86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL  165 (337)
T ss_pred             CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence                                                                                            


Q ss_pred             -C-C--------------------------------------------------------------------Cccccchh
Q 045092          158 -K-Q--------------------------------------------------------------------PIVYMAPE  167 (307)
Q Consensus       158 -~-~--------------------------------------------------------------------t~~y~aPE  167 (307)
                       . .                                                                    +..|+|||
T Consensus       166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE  245 (337)
T cd05054         166 YKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE  245 (337)
T ss_pred             hhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcH
Confidence             0 0                                                                    34699999


Q ss_pred             hhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhcccc
Q 045092          168 YAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCS  246 (307)
Q Consensus       168 ~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~  246 (307)
                      ++.+..++.++|||||||+++||++ |+.||......+      .....+..+      ..+..+.....++.+++..|+
T Consensus       246 ~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~------~~~~~~~~~------~~~~~~~~~~~~~~~l~~~cl  313 (337)
T cd05054         246 SIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE------EFCRRLKEG------TRMRAPEYATPEIYSIMLDCW  313 (337)
T ss_pred             HhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH------HHHHHHhcc------CCCCCCccCCHHHHHHHHHHc
Confidence            9999999999999999999999998 999985422111      111111111      112223345568999999999


Q ss_pred             CCCCCCCCCCHHHHHHHhccc
Q 045092          247 SSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       247 ~~~dP~~RPs~~~vl~~L~~~  267 (307)
                       +.+|++||++.+|+++|+..
T Consensus       314 -~~~p~~RPs~~ell~~l~~~  333 (337)
T cd05054         314 -HNNPEDRPTFSELVEILGDL  333 (337)
T ss_pred             -cCChhhCcCHHHHHHHHHHH
Confidence             99999999999999999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.87  E-value=5.4e-22  Score=178.35  Aligned_cols=174  Identities=19%  Similarity=0.266  Sum_probs=130.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      .++|...+.||+|+||.||++.. .+++.||+|.+........+.+.+|+.+++.++|+||+++++++......      
T Consensus        18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   97 (297)
T cd06656          18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   97 (297)
T ss_pred             hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence            36788899999999999999994 57899999998765555556789999999999999999999987654110      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        98 ~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~  177 (297)
T cd06656          98 LAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG  177 (297)
T ss_pred             cCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCcccC
Confidence                                                                                            


Q ss_pred             CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHH
Q 045092          160 PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTS  239 (307)
Q Consensus       160 t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  239 (307)
                      ++.|+|||++.++.++.++|||||||++++|++|+.||..........      ...     .........+...+..+.
T Consensus       178 ~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~------~~~-----~~~~~~~~~~~~~~~~~~  246 (297)
T cd06656         178 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY------LIA-----TNGTPELQNPERLSAVFR  246 (297)
T ss_pred             CccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee------eec-----cCCCCCCCCccccCHHHH
Confidence            567999999998889999999999999999999999996433211100      000     000001111234455788


Q ss_pred             HHhccccCCCCCCCCCCHHHHHH--Hhcccccccc
Q 045092          240 DGNDQCSSSVTPTNRPLMSFVVS--MLEDKAEVCS  272 (307)
Q Consensus       240 ~l~~~C~~~~dP~~RPs~~~vl~--~L~~~~~v~~  272 (307)
                      +++.+|+ ..+|++||++.++++  .+....+.+.
T Consensus       247 ~li~~~l-~~~p~~Rps~~~il~~~~~~~~~~~~~  280 (297)
T cd06656         247 DFLNRCL-EMDVDRRGSAKELLQHPFLKLAKPLSS  280 (297)
T ss_pred             HHHHHHc-cCChhhCcCHHHHhcCchhcccccccc
Confidence            9999999 999999999999987  3444444444

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.87  E-value=9.7e-22  Score=175.57  Aligned_cols=171  Identities=20%  Similarity=0.306  Sum_probs=117.7

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-c-CCCEEEEEEccCCC--hhcHHHHHHHHHHHhhC---CCCCccceeeeeecCCC--
Q 045092           88 NNFASENEISERGFGPVYRGLL-A-DGKVIEVKQLSSKS--KQGNREIVNEIGMISAL---QHPNLVKLYRLCTETLK--  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~g~~~~~~~--  158 (307)
                      ++|...+.||+|+||.||+|.. . +++.||||.++...  ......+.+|+.++..+   +||||++++++|.....  
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            3688889999999999999985 3 46789999886432  22234567788777765   69999999998742100  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        81 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  160 (290)
T cd07862          81 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY  160 (290)
T ss_pred             CCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEec
Confidence                                                                                            


Q ss_pred             ----------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHH----hhh----
Q 045092          159 ----------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLK----RAR----  220 (307)
Q Consensus       159 ----------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~----~~~----  220 (307)
                                .|+.|+|||.+.++.++.++|||||||++|||++|+.||......+   ....+.....    ...    
T Consensus       161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~---~~~~i~~~~~~~~~~~~~~~~  237 (290)
T cd07862         161 SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD---QLGKILDVIGLPGEEDWPRDV  237 (290)
T ss_pred             cCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH---HHHHHHHHhCCCChhhchhhh
Confidence                      0678999999998899999999999999999999999996432211   1111111000    000    


Q ss_pred             hh-cccccC-------CCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          221 KL-NGASCS-------KFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       221 ~~-~~~~~~-------~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .+ .....+       .+....+..+.+++.+|+ +.||++||++.++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l-~~~P~~R~s~~~~l~  286 (290)
T cd07862         238 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCL-TFNPAKRISAYSALS  286 (290)
T ss_pred             cccchhccCCCCCCHHHHccCCCHHHHHHHHHHh-ccCchhcCCHHHHhc
Confidence            00 000000       011123447789999999 999999999999975

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.87  E-value=1.3e-21  Score=181.55  Aligned_cols=174  Identities=16%  Similarity=0.201  Sum_probs=121.7

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----C-
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----Q-  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----~-  159 (307)
                      +|+..+.||+|+||.||++.. .+++.||||.+...  .....+.+.+|+.++..++|+||+++++++.....     . 
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            578889999999999999995 47899999998643  22345678999999999999999999987654320     0 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 lv~e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~  160 (372)
T cd07853          81 VVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKH  160 (372)
T ss_pred             EEeeccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCcccc
Confidence                                                                                            


Q ss_pred             ------CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHH---------HHHHHHHHhhh-hh
Q 045092          160 ------PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLL---------DWLGSYLKRAR-KL  222 (307)
Q Consensus       160 ------t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~---------~~~~~~~~~~~-~~  222 (307)
                            ++.|+|||++.+. .++.++|||||||+++||++|+.||............         ..+........ .+
T Consensus       161 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~  240 (372)
T cd07853         161 MTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHI  240 (372)
T ss_pred             CCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHH
Confidence                  5679999998764 5789999999999999999999999644322110000         00000000000 00


Q ss_pred             -ccccc-C------CCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          223 -NGASC-S------KFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       223 -~~~~~-~------~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                       ..... +      .+....+.++.+++..|+ +.||.+||++.+++..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL-~~dP~~R~t~~e~l~h  288 (372)
T cd07853         241 LRGPHKPPSLPVLYTLSSQATHEAVHLLCRML-VFDPDKRISAADALAH  288 (372)
T ss_pred             HhCCCCCCchHHhcccCCCCCHHHHHHHHHhC-CCChhhCcCHHHHhcC
Confidence             00000 0      111223457889999999 9999999999999863

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.87  E-value=7.6e-22  Score=174.17  Aligned_cols=156  Identities=19%  Similarity=0.325  Sum_probs=114.4

Q ss_pred             CcccCCCCeeEEEEEEcC-------------CCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-
Q 045092           94 NEISERGFGPVYRGLLAD-------------GKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~~~-------------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-  159 (307)
                      +.||+|+||.||+|.+.+             ...||+|.+..........|.+|+.++..++||||+++++++...... 
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            368999999999998532             235899988665444556789999999999999999999987654111 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~  160 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPI  160 (262)
T ss_pred             EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCc
Confidence                                                                                            


Q ss_pred             ----------Cccccchhhhc-cCCCCchhHHHHHHHHHHHHH-hCCCCCcCCCccCcccHHHHHHHHHHhhhhhccccc
Q 045092          160 ----------PIVYMAPEYAK-HGYLTDKAEVCSFGIVTLEIE-SGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC  227 (307)
Q Consensus       160 ----------t~~y~aPE~~~-~~~~~~~sDV~s~Gvvl~ell-tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  227 (307)
                                +..|+|||++. .+.++.++|||||||++|||+ +|+.|+.......       ..... .+.  .    
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-------~~~~~-~~~--~----  226 (262)
T cd05077         161 TVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE-------KERFY-EGQ--C----  226 (262)
T ss_pred             cccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH-------HHHHH-hcC--c----
Confidence                      55699999887 466899999999999999998 5888874322111       00101 110  1    


Q ss_pred             CCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhc
Q 045092          228 SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLE  265 (307)
Q Consensus       228 ~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~  265 (307)
                       .........+.+++..|| +.||.+||++.+|++.++
T Consensus       227 -~~~~~~~~~~~~li~~cl-~~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         227 -MLVTPSCKELADLMTHCM-NYDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             -cCCCCChHHHHHHHHHHc-CCChhhCcCHHHHHHhcC
Confidence             111223457889999999 999999999999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.87  E-value=1.2e-21  Score=180.88  Aligned_cols=177  Identities=15%  Similarity=0.161  Sum_probs=124.2

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC----
Q 045092           86 ATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK----  158 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~----  158 (307)
                      ..++|...+.||+|+||.||++.. .++..||||.+...  .......+.+|+.++..++|+||+++++++.....    
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   98 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF   98 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence            357899999999999999999984 47899999998643  23345678899999999999999999987642210    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        99 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~  178 (359)
T cd07876          99 QDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFM  178 (359)
T ss_pred             ceeEEEEeCCCcCHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccCcc
Confidence                                                                                            


Q ss_pred             -----CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCc------------ccHHHHHH----HHHH
Q 045092          159 -----QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDK------------FYLLDWLG----SYLK  217 (307)
Q Consensus       159 -----~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~------------~~l~~~~~----~~~~  217 (307)
                           .|+.|+|||.+.+..++.++|||||||++|||++|+.||........            ..+.+.+.    ....
T Consensus       179 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (359)
T cd07876         179 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVE  258 (359)
T ss_pred             CCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHh
Confidence                 06679999999998999999999999999999999999964322110            00000000    0000


Q ss_pred             hhhhhc-----c----cccC---CCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          218 RARKLN-----G----ASCS---KFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       218 ~~~~~~-----~----~~~~---~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ......     +    ...+   ......+..+.+++.+|+ +.||++|||+.|+++.
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL-~~dP~~R~t~~e~l~h  315 (359)
T cd07876         259 NRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKML-VIDPDKRISVDEALRH  315 (359)
T ss_pred             hCCCCCCcchhhhccccccccccccccccchhHHHHHHHHh-ccCcccCCCHHHHhcC
Confidence            000000     0    0000   001112346789999999 9999999999999863

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.87  E-value=6.6e-22  Score=182.18  Aligned_cols=177  Identities=15%  Similarity=0.180  Sum_probs=124.3

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC----
Q 045092           86 ATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK----  158 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~----  158 (307)
                      ..++|...+.||+|+||.||++.. .+++.||||.+...  .......+.+|+.+++.++|+||+++++++.....    
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   94 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF   94 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence            457899999999999999999984 46889999998653  22334678899999999999999999987643210    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        95 ~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~~  174 (355)
T cd07874          95 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM  174 (355)
T ss_pred             ceeEEEhhhhcccHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCccc
Confidence                                                                                            


Q ss_pred             -----CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCccc------------HH----HHHHHHHH
Q 045092          159 -----QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFY------------LL----DWLGSYLK  217 (307)
Q Consensus       159 -----~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~------------l~----~~~~~~~~  217 (307)
                           .|+.|+|||++.+..++.++|||||||+++||++|+.||..........            +.    ..+.....
T Consensus       175 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (355)
T cd07874         175 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE  254 (355)
T ss_pred             cCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHh
Confidence                 0678999999998889999999999999999999999996432111000            00    00000000


Q ss_pred             hhhhhcccc------------cCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          218 RARKLNGAS------------CSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       218 ~~~~~~~~~------------~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .........            +..........+.+++.+|+ +.||++|||+.|+++.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL-~~dP~~Rps~~ell~h  311 (355)
T cd07874         255 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML-VIDPAKRISVDEALQH  311 (355)
T ss_pred             cCCccccccchhhccccccccccccccccchHHHHHHHHHh-cCCchhcCCHHHHhcC
Confidence            000000000            00011112346789999999 9999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=4.9e-22  Score=177.53  Aligned_cols=164  Identities=21%  Similarity=0.221  Sum_probs=122.5

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCCh---hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSK---QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      +|+..+.||+|+||.||++.. .+++.||||.+.....   .....+.+|+.++++++|+||+++++.+......     
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            477789999999999999995 4789999999864321   2234678899999999999999999877653110     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  160 (285)
T cd05605          81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRG  160 (285)
T ss_pred             ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcccc
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 ---PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 ---t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                         ++.|+|||++.+..++.++|||||||++|||++|+.||.......   ....+...+..       .....+..++.
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~---~~~~~~~~~~~-------~~~~~~~~~~~  230 (285)
T cd05605         161 RVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV---KREEVERRVKE-------DQEEYSEKFSE  230 (285)
T ss_pred             ccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh---HHHHHHHHhhh-------cccccCcccCH
Confidence               568999999998899999999999999999999999996432211   11111111111       11222344566


Q ss_pred             HHHHHhccccCCCCCCCCC-----CHHHHHHH
Q 045092          237 RTSDGNDQCSSSVTPTNRP-----LMSFVVSM  263 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RP-----s~~~vl~~  263 (307)
                      .+.+++..|+ +.||.+||     ++.++++.
T Consensus       231 ~~~~li~~~l-~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05605         231 AARSICRQLL-TKDPGFRLGCRGEGAEEVKAH  261 (285)
T ss_pred             HHHHHHHHHc-cCCHHHhcCCCCCCHHHHhcC
Confidence            8899999999 99999999     77787553

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.87  E-value=4.1e-22  Score=175.78  Aligned_cols=164  Identities=18%  Similarity=0.243  Sum_probs=121.5

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      .++|...+.||+|+||.||++.. .+++.||+|.++.........+.+|+.++..++|+||+++++++......      
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~   87 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF   87 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence            34677788999999999999984 47889999998765544556788999999999999999999876543100      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        88 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~  167 (267)
T cd06645          88 CGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFI  167 (267)
T ss_pred             cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCccccccccc
Confidence                                                                                            


Q ss_pred             -Cccccchhhhc---cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCc--hh
Q 045092          160 -PIVYMAPEYAK---HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFG--FK  233 (307)
Q Consensus       160 -t~~y~aPE~~~---~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~--~~  233 (307)
                       +..|+|||++.   .+.++.++|||||||++|||++|+.|+........      ......     .....+.+.  ..
T Consensus       168 ~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~------~~~~~~-----~~~~~~~~~~~~~  236 (267)
T cd06645         168 GTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA------LFLMTK-----SNFQPPKLKDKMK  236 (267)
T ss_pred             CcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh------HHhhhc-----cCCCCCcccccCC
Confidence             57899999874   55688999999999999999999999853322111      000000     111111111  13


Q ss_pred             hHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          234 FYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       234 ~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ++..+.+++.+|+ +.+|++||++.+|++
T Consensus       237 ~~~~~~~li~~~l-~~~P~~R~~~~~ll~  264 (267)
T cd06645         237 WSNSFHHFVKMAL-TKNPKKRPTAEKLLQ  264 (267)
T ss_pred             CCHHHHHHHHHHc-cCCchhCcCHHHHhc
Confidence            4457889999999 999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.87  E-value=8e-22  Score=174.37  Aligned_cols=164  Identities=23%  Similarity=0.313  Sum_probs=123.1

Q ss_pred             cccCCcccCCCCeeEEEEEEc----CCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           90 FASENEISERGFGPVYRGLLA----DGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~~----~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      |...+.||+|+||.||+|...    ++..||||.+...  .....+.+.+|++++++++|+||+++++++.....     
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            556789999999999999843    4678999998653  23345678999999999999999999986532100     


Q ss_pred             ----------------------------C---------------------------------------------------
Q 045092          159 ----------------------------Q---------------------------------------------------  159 (307)
Q Consensus       159 ----------------------------~---------------------------------------------------  159 (307)
                                                  .                                                   
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~  160 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLS  160 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccc
Confidence                                        0                                                   


Q ss_pred             -----------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhh
Q 045092          160 -----------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARK  221 (307)
Q Consensus       160 -----------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~  221 (307)
                                       +..|++||.+.++.++.++||||||+++|||++ |+.|+.....   ..+..    .+..+  
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~---~~~~~----~~~~~--  231 (273)
T cd05074         161 KKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN---SEIYN----YLIKG--  231 (273)
T ss_pred             ccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH---HHHHH----HHHcC--
Confidence                             257899999998889999999999999999999 8888853221   11111    11111  


Q ss_pred             hcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          222 LNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       222 ~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                          .....+..++..+.+++.+|+ +.+|++||++.++++.|+.+
T Consensus       232 ----~~~~~~~~~~~~~~~l~~~~l-~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         232 ----NRLKQPPDCLEDVYELMCQCW-SPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             ----CcCCCCCCCCHHHHHHHHHHc-CCChhhCcCHHHHHHHHHhh
Confidence                111222345568999999999 99999999999999998764

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=6.6e-22  Score=173.57  Aligned_cols=166  Identities=20%  Similarity=0.282  Sum_probs=125.2

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      .++|...+.||+|+||.||++.. .+++.+|+|.+........+.+.+|+.++++++|+||+++++++......      
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~   81 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY   81 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence            46788899999999999999995 46789999998766555667899999999999999999999876543100      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~  161 (262)
T cd06613          82 CGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSF  161 (262)
T ss_pred             CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhccccc
Confidence                                                                                            


Q ss_pred             --CccccchhhhccC---CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          160 --PIVYMAPEYAKHG---YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       160 --t~~y~aPE~~~~~---~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                        +..|+|||.+.+.   .++.++||||||++++||++|+.|+........      ... ..... . ...........
T Consensus       162 ~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~------~~~-~~~~~-~-~~~~~~~~~~~  232 (262)
T cd06613         162 IGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA------LFL-ISKSN-F-PPPKLKDKEKW  232 (262)
T ss_pred             cCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH------HHH-HHhcc-C-CCccccchhhh
Confidence              4569999998776   889999999999999999999999964332111      000 11000 0 11111112344


Q ss_pred             HHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      +..+.+++.+|+ ..+|..||++.+|+.
T Consensus       233 ~~~~~~li~~~l-~~~p~~Rpt~~~il~  259 (262)
T cd06613         233 SPVFHDFIKKCL-TKDPKKRPTATKLLQ  259 (262)
T ss_pred             hHHHHHHHHHHc-CCChhhCCCHHHHhc
Confidence            568899999999 999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.87  E-value=6.6e-22  Score=177.02  Aligned_cols=161  Identities=20%  Similarity=0.232  Sum_probs=123.0

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      ++|+..+.||+|+||.||+|... ++..||+|.+........+.+.+|+.++++++|+||+++++++......       
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   91 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC   91 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence            56888899999999999999954 6889999999776666677899999999999999999999976543100       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        92 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~  171 (292)
T cd06644          92 PGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFI  171 (292)
T ss_pred             CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccccccccceec
Confidence                                                                                            


Q ss_pred             -Cccccchhhhc-----cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccC--CCc
Q 045092          160 -PIVYMAPEYAK-----HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCS--KFG  231 (307)
Q Consensus       160 -t~~y~aPE~~~-----~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~l~  231 (307)
                       +..|+|||++.     ...++.++|||||||++|||++|+.|+.....      ......       +.....+  ..+
T Consensus       172 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~------~~~~~~-------~~~~~~~~~~~~  238 (292)
T cd06644         172 GTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP------MRVLLK-------IAKSEPPTLSQP  238 (292)
T ss_pred             CCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH------HHHHHH-------HhcCCCccCCCC
Confidence             56799999885     34568899999999999999999999853221      111111       1111111  112


Q ss_pred             hhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          232 FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       232 ~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ..++.++.+++..|+ ..+|++||++.++++
T Consensus       239 ~~~~~~~~~li~~~l-~~~p~~Rp~~~~il~  268 (292)
T cd06644         239 SKWSMEFRDFLKTAL-DKHPETRPSAAQLLE  268 (292)
T ss_pred             cccCHHHHHHHHHHh-cCCcccCcCHHHHhc
Confidence            345568899999999 999999999999975

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.87  E-value=8.2e-22  Score=188.71  Aligned_cols=160  Identities=15%  Similarity=0.157  Sum_probs=123.4

Q ss_pred             CcccCCcccCCCCeeEEEEEEc-C-CCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC--------
Q 045092           89 NFASENEISERGFGPVYRGLLA-D-GKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK--------  158 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~-~-~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~--------  158 (307)
                      .|...+.||+|+||.||++... + +..||+|.+..........+.+|+.++..++|||||++++++.....        
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~  147 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG  147 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence            3888899999999999999843 4 67889998765555555678899999999999999999998765411        


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~  227 (478)
T PTZ00267        148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDV  227 (478)
T ss_pred             CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccccc
Confidence                                                                                            


Q ss_pred             -----CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchh
Q 045092          159 -----QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFK  233 (307)
Q Consensus       159 -----~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  233 (307)
                           +|+.|+|||++.++.++.++|||||||++|||++|+.||.....      .+.+..... +.      .+.++..
T Consensus       228 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~------~~~~~~~~~-~~------~~~~~~~  294 (478)
T PTZ00267        228 ASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ------REIMQQVLY-GK------YDPFPCP  294 (478)
T ss_pred             ccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHh-CC------CCCCCcc
Confidence                 06679999999999999999999999999999999999953221      111111111 11      1122334


Q ss_pred             hHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          234 FYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       234 ~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ++..+.+++..|+ +.||++||++.+++.
T Consensus       295 ~s~~~~~li~~~L-~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        295 VSSGMKALLDPLL-SKNPALRPTTQQLLH  322 (478)
T ss_pred             CCHHHHHHHHHHh-ccChhhCcCHHHHHh
Confidence            5568999999999 999999999998864

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.87  E-value=5.8e-22  Score=176.09  Aligned_cols=155  Identities=21%  Similarity=0.297  Sum_probs=114.9

Q ss_pred             cccCCCCeeEEEEEEcC-------------------------CCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccce
Q 045092           95 EISERGFGPVYRGLLAD-------------------------GKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKL  149 (307)
Q Consensus        95 ~lG~G~~g~Vy~~~~~~-------------------------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l  149 (307)
                      .||+|+||.||+|.+..                         ...||+|.+..........|.+|+.+++.++|+||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            69999999999997421                         13589999876544445678999999999999999999


Q ss_pred             eeeeecCCCC----------------------------------------------------------------------
Q 045092          150 YRLCTETLKQ----------------------------------------------------------------------  159 (307)
Q Consensus       150 ~g~~~~~~~~----------------------------------------------------------------------  159 (307)
                      +|+|......                                                                      
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~  161 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSP  161 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccc
Confidence            9988654111                                                                      


Q ss_pred             ---------------------Cccccchhhhcc-CCCCchhHHHHHHHHHHHHH-hCCCCCcCCCccCcccHHHHHHHHH
Q 045092          160 ---------------------PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIE-SGRSNVICRTKEDKFYLLDWLGSYL  216 (307)
Q Consensus       160 ---------------------t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~ell-tg~~p~~~~~~~~~~~l~~~~~~~~  216 (307)
                                           +..|+|||++.+ ..++.++|||||||++|||+ +|+.|+........   .    ..+
T Consensus       162 ~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~---~----~~~  234 (274)
T cd05076         162 FIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK---E----RFY  234 (274)
T ss_pred             eeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH---H----HHH
Confidence                                 456999998875 56899999999999999995 68998854322111   1    111


Q ss_pred             HhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhc
Q 045092          217 KRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLE  265 (307)
Q Consensus       217 ~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~  265 (307)
                      ..        ...++......+.+++..|| +.+|++||++.+|++.|+
T Consensus       235 ~~--------~~~~~~~~~~~~~~li~~cl-~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         235 EK--------KHRLPEPSCKELATLISQCL-TYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             Hh--------ccCCCCCCChHHHHHHHHHc-ccChhhCcCHHHHHHhhC
Confidence            11        01112223347889999999 999999999999998874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.87  E-value=7.8e-22  Score=176.31  Aligned_cols=169  Identities=22%  Similarity=0.348  Sum_probs=126.7

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEEc------CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC
Q 045092           86 ATNNFASENEISERGFGPVYRGLLA------DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK  158 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  158 (307)
                      .+++|++.+.||+|+||.||+|...      .+..||+|.+.... ......+.+|+.++++++|+||+++++++.+...
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP   83 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            4678899999999999999999742      24579999886443 2233468899999999999999999987643310


Q ss_pred             C-------------------------------------------------------------------------------
Q 045092          159 Q-------------------------------------------------------------------------------  159 (307)
Q Consensus       159 ~-------------------------------------------------------------------------------  159 (307)
                      .                                                                               
T Consensus        84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Df  163 (288)
T cd05061          84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDF  163 (288)
T ss_pred             cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcC
Confidence            0                                                                               


Q ss_pred             --------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHh
Q 045092          160 --------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKR  218 (307)
Q Consensus       160 --------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~  218 (307)
                                          +..|+|||++.++.++.++|||||||+++||++ |..|+.....      .+... .+..
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~------~~~~~-~~~~  236 (288)
T cd05061         164 GMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN------EQVLK-FVMD  236 (288)
T ss_pred             CccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH------HHHHH-HHHc
Confidence                                235999999999999999999999999999999 7888853221      11111 1111


Q ss_pred             hhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          219 ARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       219 ~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      +      ..+..+...+..+.+++..|+ +.+|++||++.++++.|.+..
T Consensus       237 ~------~~~~~~~~~~~~~~~li~~~l-~~~p~~Rps~~~ll~~l~~~~  279 (288)
T cd05061         237 G------GYLDQPDNCPERVTDLMRMCW-QFNPKMRPTFLEIVNLLKDDL  279 (288)
T ss_pred             C------CCCCCCCCCCHHHHHHHHHHc-CCChhHCcCHHHHHHHHHhhc
Confidence            1      112223345568999999999 999999999999999988754

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.87  E-value=4.8e-22  Score=176.92  Aligned_cols=162  Identities=20%  Similarity=0.233  Sum_probs=121.1

Q ss_pred             cccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---------
Q 045092           90 FASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---------  159 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---------  159 (307)
                      |+..+.||+|+||.||+|... ++..+|+|.+..........+.+|+++++.++|+||+++++++......         
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~   86 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   86 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence            466788999999999999954 6788999998766656667899999999999999999999887653100         


Q ss_pred             -------------------------------------------------------------------------------C
Q 045092          160 -------------------------------------------------------------------------------P  160 (307)
Q Consensus       160 -------------------------------------------------------------------------------t  160 (307)
                                                                                                     +
T Consensus        87 ~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  166 (282)
T cd06643          87 GAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGT  166 (282)
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccccccccccccc
Confidence                                                                                           5


Q ss_pred             ccccchhhhc-----cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhH
Q 045092          161 IVYMAPEYAK-----HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFY  235 (307)
Q Consensus       161 ~~y~aPE~~~-----~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  235 (307)
                      ..|+|||++.     +..++.++|||||||++|||++|+.||.....      ......... ..    ......+..++
T Consensus       167 ~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~------~~~~~~~~~-~~----~~~~~~~~~~~  235 (282)
T cd06643         167 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP------MRVLLKIAK-SE----PPTLAQPSRWS  235 (282)
T ss_pred             ccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH------HHHHHHHhh-cC----CCCCCCccccC
Confidence            6799999874     34578899999999999999999999853221      111111111 00    00111223455


Q ss_pred             HHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          236 RRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       236 ~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ..+.+++..|+ +.+|.+||++.++++.
T Consensus       236 ~~~~~li~~~l-~~~p~~Rp~~~~il~~  262 (282)
T cd06643         236 SEFKDFLKKCL-EKNVDARWTTTQLLQH  262 (282)
T ss_pred             HHHHHHHHHHc-cCChhhCcCHHHHhcC
Confidence            68999999999 9999999999998753

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.87  E-value=1.9e-22  Score=184.21  Aligned_cols=172  Identities=22%  Similarity=0.297  Sum_probs=123.4

Q ss_pred             hcCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      .+.|+..++||+|.||.||+++ ..+|+.||+|++....  ........+||.+|++|+||||++|.|...+....    
T Consensus       116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl  195 (560)
T KOG0600|consen  116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL  195 (560)
T ss_pred             hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence            3568888999999999999999 6789999999987543  44456788999999999999999999887665221    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       196 VFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~  275 (560)
T KOG0600|consen  196 VFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAP  275 (560)
T ss_pred             EEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCcc
Confidence                                                                                            


Q ss_pred             ------CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhh----h---hhc--
Q 045092          160 ------PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRA----R---KLN--  223 (307)
Q Consensus       160 ------t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~----~---~~~--  223 (307)
                            |+.|.|||.+.+. .|+..+|+||.||||.||++|++.+.+....+..   ..+..++..-    +   ++.  
T Consensus       276 ~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl---~kIfklcGSP~e~~W~~~kLP~~  352 (560)
T KOG0600|consen  276 YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQL---HKIFKLCGSPTEDYWPVSKLPHA  352 (560)
T ss_pred             cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHH---HHHHHHhCCCChhccccccCCcc
Confidence                  8999999998864 6999999999999999999999998654332211   1111111100    0   011  


Q ss_pred             ccccCCCc---------hhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          224 GASCSKFG---------FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       224 ~~~~~~l~---------~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ....+..+         ..++...+++....+ ..||.+|.|+.++++
T Consensus       353 ~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL-~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  353 TIFKPQQPYKRRLRETFKDFPASALDLLEKLL-SLDPDKRGTASSALQ  399 (560)
T ss_pred             cccCCCCcccchHHHHhccCCHHHHHHHHHHh-ccCccccccHHHHhc
Confidence            11111110         112236677777777 889999999998864

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=5.5e-22  Score=176.26  Aligned_cols=163  Identities=21%  Similarity=0.276  Sum_probs=124.7

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      .++|.+.+.||.|+||.||++... ++..||+|.+........+.|.+|+.++++++|+||+++++++......      
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF   83 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence            467888999999999999999954 6889999998766666667899999999999999999999987654110      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        84 ~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~  163 (280)
T cd06611          84 CDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTF  163 (280)
T ss_pred             cCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccccccccee
Confidence                                                                                            


Q ss_pred             --Cccccchhhhcc-----CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC--
Q 045092          160 --PIVYMAPEYAKH-----GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF--  230 (307)
Q Consensus       160 --t~~y~aPE~~~~-----~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l--  230 (307)
                        ++.|++||++..     ..++.++||||||+++|||++|+.||......      ..... +.      ....+.+  
T Consensus       164 ~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~------~~~~~-~~------~~~~~~~~~  230 (280)
T cd06611         164 IGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM------RVLLK-IL------KSEPPTLDQ  230 (280)
T ss_pred             ecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH------HHHHH-Hh------cCCCCCcCC
Confidence              667999998753     34678999999999999999999998533211      11111 11      1111111  


Q ss_pred             chhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          231 GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       231 ~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      +..++..+.+++..|+ +.+|.+||++.++++.
T Consensus       231 ~~~~~~~~~~li~~~l-~~~p~~Rps~~~il~~  262 (280)
T cd06611         231 PSKWSSSFNDFLKSCL-VKDPDDRPTAAELLKH  262 (280)
T ss_pred             cccCCHHHHHHHHHHh-ccChhhCcCHHHHhcC
Confidence            2345568889999999 9999999999999763

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.87  E-value=1.1e-21  Score=174.19  Aligned_cols=172  Identities=20%  Similarity=0.286  Sum_probs=126.9

Q ss_pred             CcccCCcccCCCCeeEEEEEEc-----CCCEEEEEEccCCChh-cHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           89 NFASENEISERGFGPVYRGLLA-----DGKVIEVKQLSSKSKQ-GNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~-----~~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      .|...+.||+|+||.||++.+.     ++..||||.+...... ....|.+|+++++.++|+||+++++++......   
T Consensus         5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05038           5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR   84 (284)
T ss_pred             hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence            4666789999999999999853     3678999998755433 456899999999999999999999987652100   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        85 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  164 (284)
T cd05038          85 LIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKD  164 (284)
T ss_pred             EEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCc
Confidence                                                                                            


Q ss_pred             ----------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcc--------cHHHHHHHHHHhhhh
Q 045092          160 ----------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKF--------YLLDWLGSYLKRARK  221 (307)
Q Consensus       160 ----------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~--------~l~~~~~~~~~~~~~  221 (307)
                                +..|++||++.+..++.++||||||++++||++|+.|+.........        .....+...+...  
T Consensus       165 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  242 (284)
T cd05038         165 YYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEG--  242 (284)
T ss_pred             ceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcC--
Confidence                      23489999999889999999999999999999999997532211100        0011111111111  


Q ss_pred             hcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          222 LNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       222 ~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                          .....+..++.++.+++.+|+ +.+|.+||++.+|+++|+.+
T Consensus       243 ----~~~~~~~~~~~~~~~li~~cl-~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         243 ----ERLPRPPSCPDEVYDLMKLCW-EAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             ----CcCCCCccCCHHHHHHHHHHh-ccChhhCCCHHHHHHHHhhc
Confidence                111112345568999999999 99999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.87  E-value=2.7e-22  Score=182.58  Aligned_cols=154  Identities=18%  Similarity=0.147  Sum_probs=119.0

Q ss_pred             CcccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----------
Q 045092           94 NEISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----------  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----------  159 (307)
                      +.||+|+||.||++.. .+|+.||||+++...   ......+.+|+.++.+++|+||+++++++......          
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            4699999999999995 478999999986432   23345688999999999999999998877654110          


Q ss_pred             -----------------------------------------------------------------------------Ccc
Q 045092          160 -----------------------------------------------------------------------------PIV  162 (307)
Q Consensus       160 -----------------------------------------------------------------------------t~~  162 (307)
                                                                                                   |+.
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~  160 (323)
T cd05571          81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE  160 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCcc
Confidence                                                                                         778


Q ss_pred             ccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHh
Q 045092          163 YMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGN  242 (307)
Q Consensus       163 y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~  242 (307)
                      |+|||.+.+..++.++|||||||++|||++|+.||.....   ..+    ...+..       ....++...+.++.+++
T Consensus       161 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~---~~~----~~~~~~-------~~~~~p~~~~~~~~~li  226 (323)
T cd05571         161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---EKL----FELILM-------EEIRFPRTLSPEAKSLL  226 (323)
T ss_pred             ccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH---HHH----HHHHHc-------CCCCCCCCCCHHHHHHH
Confidence            9999999998999999999999999999999999953221   111    111111       12233445667889999


Q ss_pred             ccccCCCCCCCCC-----CHHHHHH
Q 045092          243 DQCSSSVTPTNRP-----LMSFVVS  262 (307)
Q Consensus       243 ~~C~~~~dP~~RP-----s~~~vl~  262 (307)
                      ..|+ +.||++||     ++.++++
T Consensus       227 ~~~L-~~dP~~R~~~~~~~~~~ll~  250 (323)
T cd05571         227 AGLL-KKDPKQRLGGGPEDAKEIME  250 (323)
T ss_pred             HHHc-cCCHHHcCCCCCCCHHHHHc
Confidence            9999 99999999     7888875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.87  E-value=1e-21  Score=183.76  Aligned_cols=94  Identities=21%  Similarity=0.211  Sum_probs=70.4

Q ss_pred             ccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHH
Q 045092          161 IVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTS  239 (307)
Q Consensus       161 ~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  239 (307)
                      ..|+|||.+.++.++.++|||||||++|||++ |..|+.......      .....+..      ...+..+..++..+.
T Consensus       303 ~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~------~~~~~~~~------~~~~~~~~~~~~~l~  370 (400)
T cd05105         303 VKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS------TFYNKIKS------GYRMAKPDHATQEVY  370 (400)
T ss_pred             cceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH------HHHHHHhc------CCCCCCCccCCHHHH
Confidence            56999999998899999999999999999997 999985322111      11111111      112223345566899


Q ss_pred             HHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          240 DGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       240 ~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      +++..|| +.+|++||++.+|.++|+..
T Consensus       371 ~li~~cl-~~dP~~RPt~~~l~~~l~~l  397 (400)
T cd05105         371 DIMVKCW-NSEPEKRPSFLHLSDIVESL  397 (400)
T ss_pred             HHHHHHC-ccCHhHCcCHHHHHHHHHHH
Confidence            9999999 99999999999999998864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.87  E-value=4.5e-22  Score=174.33  Aligned_cols=161  Identities=14%  Similarity=0.174  Sum_probs=123.2

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      +|+..+.||+|+||.||++.. .++..+|+|.++.. .....+.+.+|+.++.+++|+||+++++++.+....       
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            477789999999999999994 47889999988643 233456788999999999999999999877653100       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~  160 (255)
T cd08219          81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTY  160 (255)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccccccccc
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHH
Q 045092          160 --PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRR  237 (307)
Q Consensus       160 --t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  237 (307)
                        ++.|+|||++.+..++.++||||||+++++|++|+.||.....      ....... ..+      ....++...+..
T Consensus       161 ~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~------~~~~~~~-~~~------~~~~~~~~~~~~  227 (255)
T cd08219         161 VGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW------KNLILKV-CQG------SYKPLPSHYSYE  227 (255)
T ss_pred             cCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH------HHHHHHH-hcC------CCCCCCcccCHH
Confidence              5569999999988899999999999999999999999963221      1111111 111      112233445567


Q ss_pred             HHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          238 TSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       238 ~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      +.+++.+|+ +.||.+||++.+++..
T Consensus       228 ~~~li~~~l-~~~P~~Rp~~~~il~~  252 (255)
T cd08219         228 LRSLIKQMF-KRNPRSRPSATTILSR  252 (255)
T ss_pred             HHHHHHHHH-hCCcccCCCHHHHhhc
Confidence            889999999 9999999999999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.87  E-value=2e-21  Score=171.20  Aligned_cols=159  Identities=21%  Similarity=0.314  Sum_probs=122.5

Q ss_pred             cccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChh---------cHHHHHHHHHHHhhCCCCCccceeeeeecCCCC
Q 045092           90 FASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQ---------GNREIVNEIGMISALQHPNLVKLYRLCTETLKQ  159 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~---------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  159 (307)
                      |.....||+|+||.||+|.. .+++.+|+|.+......         ..+.+.+|+.++.+++|+||+++++++.+....
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            66778999999999999985 46889999988643221         124688999999999999999999987653111


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        82 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~  161 (267)
T cd06628          82 NIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSL  161 (267)
T ss_pred             EEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccccc
Confidence                                                                                            


Q ss_pred             -------------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccc
Q 045092          160 -------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGAS  226 (307)
Q Consensus       160 -------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  226 (307)
                                   +..|+|||++.++.++.++||||||+++++|++|+.||......      ..+..       .....
T Consensus       162 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~-------~~~~~  228 (267)
T cd06628         162 STKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL------QAIFK-------IGENA  228 (267)
T ss_pred             cCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH------HHHHH-------HhccC
Confidence                         34699999999888999999999999999999999999632210      10110       12223


Q ss_pred             cCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          227 CSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       227 ~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .+.++...+..+.+++..|+ +.+|.+||++.++++
T Consensus       229 ~~~~~~~~~~~~~~li~~~l-~~~p~~Rp~~~~il~  263 (267)
T cd06628         229 SPEIPSNISSEAIDFLEKTF-EIDHNKRPTAAELLK  263 (267)
T ss_pred             CCcCCcccCHHHHHHHHHHc-cCCchhCcCHHHHhh
Confidence            34445556678999999999 999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.87  E-value=2.9e-22  Score=191.60  Aligned_cols=171  Identities=22%  Similarity=0.317  Sum_probs=134.3

Q ss_pred             ccCCcccCCCCeeEEEEE-EcCC----CEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           91 ASENEISERGFGPVYRGL-LADG----KVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        91 ~~~~~lG~G~~g~Vy~~~-~~~~----~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      ...++||.|+||+||+|. ++.|    -+||||.+... ..+...+++.|+-+|.+++|+|+++|+|+|....-.     
T Consensus       699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq~  778 (1177)
T KOG1025|consen  699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQL  778 (1177)
T ss_pred             hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHHh
Confidence            345889999999999999 4444    36899988654 344567899999999999999999999999765110     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       779 mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~  858 (1177)
T KOG1025|consen  779 MPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAP  858 (1177)
T ss_pred             cccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccccccccc
Confidence                                                                                            


Q ss_pred             ----CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          160 ----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       160 ----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                          .+.|||-|.+....|+.++|||||||++||++| |..|++.....+       +...++.+.   .+   .-+..+
T Consensus       859 ~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e-------I~dlle~ge---RL---sqPpiC  925 (1177)
T KOG1025|consen  859 GGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE-------IPDLLEKGE---RL---SQPPIC  925 (1177)
T ss_pred             ccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH-------hhHHHhccc---cC---CCCCCc
Confidence                778999999999999999999999999999999 999997655433       333344333   11   113446


Q ss_pred             HHHHHHHhccccCCCCCCCCCCHHHHHHHhcccccccccCe
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAEVCSFGI  275 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~v~~~g~  275 (307)
                      +..+..+++.|| ..|+..||+++++...+.+....+..-+
T Consensus       926 tiDVy~~mvkCw-mid~~~rp~fkel~~~fs~~ardpqryl  965 (1177)
T KOG1025|consen  926 TIDVYMVMVKCW-MIDADSRPTFKELAEEFSRMARDPQRYL  965 (1177)
T ss_pred             cHHHHHHHHHHh-ccCcccCccHHHHHHHHHHHhcCcceEe
Confidence            668999999999 9999999999999988877665554333

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.87  E-value=2.2e-21  Score=174.10  Aligned_cols=173  Identities=19%  Similarity=0.271  Sum_probs=124.2

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-----------------CCCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccc
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-----------------DGKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVK  148 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-----------------~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~  148 (307)
                      .++|+..+.||+|+||.||++...                 +...||+|.+... .......|.+|+.++.+++|+||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~   83 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR   83 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            457888999999999999998522                 2346899998754 3334568999999999999999999


Q ss_pred             eeeeeecCCCC---------------------------------------------------------------------
Q 045092          149 LYRLCTETLKQ---------------------------------------------------------------------  159 (307)
Q Consensus       149 l~g~~~~~~~~---------------------------------------------------------------------  159 (307)
                      +++++......                                                                     
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili  163 (296)
T cd05095          84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLV  163 (296)
T ss_pred             EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEE
Confidence            99876542100                                                                     


Q ss_pred             -------------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh--CCCCCcCCCccCcc
Q 045092          160 -------------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES--GRSNVICRTKEDKF  206 (307)
Q Consensus       160 -------------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt--g~~p~~~~~~~~~~  206 (307)
                                                     ++.|++||....+.++.++|||||||++|||++  |..|+......   
T Consensus       164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~---  240 (296)
T cd05095         164 GKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE---  240 (296)
T ss_pred             cCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH---
Confidence                                           246999999888999999999999999999998  67777432211   


Q ss_pred             cHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          207 YLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       207 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      ..............  .... ...+..++..+.+++..|+ +.||.+||++.+|.+.|+.
T Consensus       241 ~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~li~~cl-~~~p~~Rp~~~~i~~~l~~  296 (296)
T cd05095         241 QVIENTGEFFRDQG--RQVY-LPKPALCPDSLYKLMLSCW-RRNAKERPSFQEIHATLLE  296 (296)
T ss_pred             HHHHHHHHHHhhcc--cccc-CCCCCCCCHHHHHHHHHHc-CCCcccCCCHHHHHHHHhC
Confidence            11111111111110  0111 1112345568899999999 9999999999999998863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.87  E-value=1e-21  Score=177.37  Aligned_cols=172  Identities=18%  Similarity=0.244  Sum_probs=123.8

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      ++|+..+.||+|+||.||++.. .++..+|+|.+.... ......+.+|++++.+++|+||+++++++.+....      
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            4788899999999999999995 478889999886542 23345788999999999999999999887653110      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  160 (308)
T cd06615          81 MDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG  160 (308)
T ss_pred             cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccccccccCCC
Confidence                                                                                            


Q ss_pred             CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHH----------------------
Q 045092          160 PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLK----------------------  217 (307)
Q Consensus       160 t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~----------------------  217 (307)
                      +..|+|||++.+..++.++||||||++++||++|+.|+.......   +..+......                      
T Consensus       161 ~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (308)
T cd06615         161 TRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE---LEAMFGRPVSEGEAKESHRPVSGHPPDSPRPM  237 (308)
T ss_pred             CcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhh---HHHhhcCccccccccCCcccccCCCCCccchh
Confidence            568999999988889999999999999999999999985322111   1100000000                      


Q ss_pred             ----hhhhhcccccCCCch-hhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          218 ----RARKLNGASCSKFGF-KFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       218 ----~~~~~~~~~~~~l~~-~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                          ....+.....+.++. .++..+.+++.+|+ ..+|++||++.+|++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l-~~~P~~Rpt~~~ll~~  287 (308)
T cd06615         238 AIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCL-KKNPKERADLKELTKH  287 (308)
T ss_pred             hHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHc-cCChhhCcCHHHHhcC
Confidence                000000011122211 24557899999999 9999999999999765

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.87  E-value=7.7e-22  Score=172.86  Aligned_cols=162  Identities=22%  Similarity=0.310  Sum_probs=125.3

Q ss_pred             cCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--------
Q 045092           88 NNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--------  159 (307)
                      ++|...+.||+|+||.||++.. +++.||+|.++...  ....+.+|+.++.+++|+||+++++++......        
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~~   82 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSK   82 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCCC
Confidence            5678889999999999999975 67889999986432  235789999999999999999999876543100        


Q ss_pred             -----------------------------------------------------------------------------Ccc
Q 045092          160 -----------------------------------------------------------------------------PIV  162 (307)
Q Consensus       160 -----------------------------------------------------------------------------t~~  162 (307)
                                                                                                   +..
T Consensus        83 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  162 (254)
T cd05083          83 GNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVK  162 (254)
T ss_pred             CCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCCce
Confidence                                                                                         456


Q ss_pred             ccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHH
Q 045092          163 YMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDG  241 (307)
Q Consensus       163 y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l  241 (307)
                      |+|||++.++.++.++||||||++++||++ |+.||.....      .+. ......      ...+.....++..+.++
T Consensus       163 y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~------~~~-~~~~~~------~~~~~~~~~~~~~~~~l  229 (254)
T cd05083         163 WTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL------KEV-KECVEK------GYRMEPPEGCPADVYVL  229 (254)
T ss_pred             ecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH------HHH-HHHHhC------CCCCCCCCcCCHHHHHH
Confidence            999999998999999999999999999998 9999853321      111 111111      11122234556788999


Q ss_pred             hccccCCCCCCCCCCHHHHHHHhcc
Q 045092          242 NDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       242 ~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      +.+|+ +.+|..||++.+++..|+.
T Consensus       230 i~~~l-~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         230 MTSCW-ETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             HHHHc-CCChhhCcCHHHHHHHHcc
Confidence            99999 9999999999999998865

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.87  E-value=2.1e-21  Score=171.13  Aligned_cols=164  Identities=17%  Similarity=0.313  Sum_probs=125.3

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC------hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS------KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      +|+..+.||+|+||.||++.. .+++.||+|.+....      ....+.+.+|++++++++|+||+++++++.+....  
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            578889999999999999984 578999999986432      11346789999999999999999999988654211  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~  160 (268)
T cd06630          81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTG  160 (268)
T ss_pred             EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccccc
Confidence                                                                                            


Q ss_pred             ----------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC
Q 045092          160 ----------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK  229 (307)
Q Consensus       160 ----------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  229 (307)
                                +..|+|||.+.+..++.++||||+|+++++|++|+.||........   .......      ......+.
T Consensus       161 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~---~~~~~~~------~~~~~~~~  231 (268)
T cd06630         161 AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH---LALIFKI------ASATTAPS  231 (268)
T ss_pred             CCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch---HHHHHHH------hccCCCCC
Confidence                      3469999999888899999999999999999999999853322111   1111110      11122344


Q ss_pred             CchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          230 FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       230 l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ++...+..+.+++..|+ ..+|.+||++.++++
T Consensus       232 ~~~~~~~~~~~~i~~~l-~~~p~~R~~~~~ll~  263 (268)
T cd06630         232 IPEHLSPGLRDVTLRCL-ELQPEDRPPSRELLK  263 (268)
T ss_pred             CchhhCHHHHHHHHHHc-CCCcccCcCHHHHhc
Confidence            45556678999999999 999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.87  E-value=8e-22  Score=177.74  Aligned_cols=167  Identities=25%  Similarity=0.355  Sum_probs=124.0

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCC--EEEEEEccCC-ChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGK--VIEVKQLSSK-SKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK---  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~--~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~---  158 (307)
                      .++|+..+.||+|+||.||+|... ++.  .+|+|.++.. .......+.+|+.++.++ +|+||+++++++.....   
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l   85 (303)
T cd05088           6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL   85 (303)
T ss_pred             hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence            467888899999999999999953 454  4688877643 233456789999999999 89999999987643210   


Q ss_pred             ----------------------------------C---------------------------------------------
Q 045092          159 ----------------------------------Q---------------------------------------------  159 (307)
Q Consensus       159 ----------------------------------~---------------------------------------------  159 (307)
                                                        .                                             
T Consensus        86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl  165 (303)
T cd05088          86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKI  165 (303)
T ss_pred             EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEe
Confidence                                              0                                             


Q ss_pred             --------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHh
Q 045092          160 --------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKR  218 (307)
Q Consensus       160 --------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~  218 (307)
                                          +..|+|||++.+..++.++|||||||+++||+| |..||......   .+..    .   
T Consensus       166 ~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~~~----~---  235 (303)
T cd05088         166 ADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA---ELYE----K---  235 (303)
T ss_pred             CccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH---HHHH----H---
Confidence                                245999999988889999999999999999998 99998533211   1111    1   


Q ss_pred             hhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          219 ARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       219 ~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                         +........+...+..+.+++.+|+ +.+|++||++.+++..|...
T Consensus       236 ---~~~~~~~~~~~~~~~~~~~li~~~l-~~~p~~Rp~~~~il~~l~~~  280 (303)
T cd05088         236 ---LPQGYRLEKPLNCDDEVYDLMRQCW-REKPYERPSFAQILVSLNRM  280 (303)
T ss_pred             ---HhcCCcCCCCCCCCHHHHHHHHHHc-CCChhhCcCHHHHHHHHHHH
Confidence               1111112222345568899999999 99999999999999988754

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.87  E-value=1.3e-21  Score=171.31  Aligned_cols=161  Identities=18%  Similarity=0.280  Sum_probs=124.4

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      +|+..+.||+|+||.||++.. .+++.||+|.+...  .....+++.+|+.++++++|+||+++++++......      
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            477789999999999999994 47899999998643  233456789999999999999999999887543110      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~  160 (256)
T cd08218          81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELART  160 (256)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhh
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 ---PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 ---t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                         ++.|+|||++.++.++.++|||||||++++|++|+.|+....      ..+......       ....+..+..++.
T Consensus       161 ~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~------~~~~~~~~~-------~~~~~~~~~~~~~  227 (256)
T cd08218         161 CIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN------MKNLVLKII-------RGSYPPVSSHYSY  227 (256)
T ss_pred             ccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC------HHHHHHHHh-------cCCCCCCcccCCH
Confidence               457999999998899999999999999999999999985322      111121111       1112223445566


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .+.+++.+|+ +.+|.+||++.+|++.
T Consensus       228 ~~~~li~~~l-~~~p~~Rp~~~~vl~~  253 (256)
T cd08218         228 DLRNLVSQLF-KRNPRDRPSVNSILEK  253 (256)
T ss_pred             HHHHHHHHHh-hCChhhCcCHHHHhhC
Confidence            8999999999 9999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=8.1e-23  Score=185.48  Aligned_cols=176  Identities=19%  Similarity=0.263  Sum_probs=125.5

Q ss_pred             hcCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCCChhcHH-HHHHHHHHHhhCC-CCCccceeeeeecCCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNR-EIVNEIGMISALQ-HPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~-~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~----  159 (307)
                      .++|...++||.|.||.||+|+ ..++..||||+++..-....+ .-++|++.|++++ |||||+|.+.+.+....    
T Consensus         9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV   88 (538)
T KOG0661|consen    9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV   88 (538)
T ss_pred             HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence            5678888999999999999999 568899999999765332222 3478999999998 99999999988776421    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        89 fE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTe  168 (538)
T KOG0661|consen   89 FEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTE  168 (538)
T ss_pred             HHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccCCCcch
Confidence                                                                                            


Q ss_pred             ---Cccccchhhhc-cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccH-HHHH----HHHHHhhhhhc-------
Q 045092          160 ---PIVYMAPEYAK-HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYL-LDWL----GSYLKRARKLN-------  223 (307)
Q Consensus       160 ---t~~y~aPE~~~-~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l-~~~~----~~~~~~~~~~~-------  223 (307)
                         |..|.|||++. .+.|+.+.|+|++|||++|+.+-++-|-+.+..+..+- .+.+    +..+.++..+.       
T Consensus       169 YVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~  248 (538)
T KOG0661|consen  169 YVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRF  248 (538)
T ss_pred             hhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCC
Confidence               89999999765 68899999999999999999998887754433221110 0000    00001111011       


Q ss_pred             -ccccCCC---chhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          224 -GASCSKF---GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       224 -~~~~~~l---~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                       ......+   -.....+..+++.+|+ +.||.+|||+.|.+++
T Consensus       249 P~~~~~~l~~L~p~~s~~~~~li~~ll-~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  249 PQVKPSPLKDLLPNASSEAASLIERLL-AWDPDKRPTASQALQH  291 (538)
T ss_pred             CcCCCCChHHhCcccCHHHHHHHHHHh-cCCCccCccHHHHhcC
Confidence             1111111   1123448889999999 9999999999999875

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=3.6e-22  Score=180.81  Aligned_cols=152  Identities=18%  Similarity=0.167  Sum_probs=116.1

Q ss_pred             ccCCCCeeEEEEEEc-CCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-------------
Q 045092           96 ISERGFGPVYRGLLA-DGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-------------  158 (307)
Q Consensus        96 lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-------------  158 (307)
                      ||+|+||.||++... +++.||+|.+...   .......+.+|+.++.+++|+||+++++++.....             
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            799999999999954 6889999998643   23345678899999999999999999988765411             


Q ss_pred             --------------------------------------------------------------------------CCcccc
Q 045092          159 --------------------------------------------------------------------------QPIVYM  164 (307)
Q Consensus       159 --------------------------------------------------------------------------~t~~y~  164 (307)
                                                                                                +|+.|+
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~  160 (312)
T cd05585          81 FHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYL  160 (312)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcccC
Confidence                                                                                      077899


Q ss_pred             chhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhcc
Q 045092          165 APEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQ  244 (307)
Q Consensus       165 aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~  244 (307)
                      |||++.+..++.++|||||||+++||++|+.||.....      ......... .       ...++...+..+.+++..
T Consensus       161 aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~------~~~~~~~~~-~-------~~~~~~~~~~~~~~li~~  226 (312)
T cd05585         161 APELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV------NEMYRKILQ-E-------PLRFPDGFDRDAKDLLIG  226 (312)
T ss_pred             CHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH------HHHHHHHHc-C-------CCCCCCcCCHHHHHHHHH
Confidence            99999998999999999999999999999999953221      111111111 1       123344566688999999


Q ss_pred             ccCCCCCCCCCC---HHHHHH
Q 045092          245 CSSSVTPTNRPL---MSFVVS  262 (307)
Q Consensus       245 C~~~~dP~~RPs---~~~vl~  262 (307)
                      |+ +.||.+||+   +.+++.
T Consensus       227 ~L-~~dp~~R~~~~~~~e~l~  246 (312)
T cd05585         227 LL-SRDPTRRLGYNGAQEIKN  246 (312)
T ss_pred             Hc-CCCHHHcCCCCCHHHHHc
Confidence            99 999999985   556554

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.87  E-value=4.9e-22  Score=188.35  Aligned_cols=168  Identities=17%  Similarity=0.158  Sum_probs=118.1

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCC--------
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETL--------  157 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~--------  157 (307)
                      ..+|...+.||+|+||.||+|.. .+++.||||++....    ....+|+.+++.++|+||+++++++....        
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~  140 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI  140 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence            46799999999999999999995 478899999885432    23457999999999999999877542110        


Q ss_pred             ------------------------C-------------------------------------------------------
Q 045092          158 ------------------------K-------------------------------------------------------  158 (307)
Q Consensus       158 ------------------------~-------------------------------------------------------  158 (307)
                                              .                                                       
T Consensus       141 ~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~  220 (440)
T PTZ00036        141 FLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKN  220 (440)
T ss_pred             EEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchh
Confidence                                    0                                                       


Q ss_pred             -----------CCccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHH--------h
Q 045092          159 -----------QPIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLK--------R  218 (307)
Q Consensus       159 -----------~t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~--------~  218 (307)
                                 .|+.|+|||++.+. .++.++|||||||++|||++|.+||......+  .+... ...+.        .
T Consensus       221 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~--~~~~i-~~~~~~p~~~~~~~  297 (440)
T PTZ00036        221 LLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD--QLVRI-IQVLGTPTEDQLKE  297 (440)
T ss_pred             ccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHH-HHHhCCCCHHHHHH
Confidence                       06779999988754 68999999999999999999999996433211  11111 00000        0


Q ss_pred             -hhhhcccccC---------CCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          219 -ARKLNGASCS---------KFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       219 -~~~~~~~~~~---------~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                       ........-+         .++...+.++.+++.+|+ +.||.+||++.|+++
T Consensus       298 ~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L-~~dP~~R~ta~e~l~  350 (440)
T PTZ00036        298 MNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFL-KYEPLKRLNPIEALA  350 (440)
T ss_pred             hchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHC-CCChhHCcCHHHHhC
Confidence             0000000001         112234458899999999 999999999999874

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.87  E-value=1.6e-21  Score=170.89  Aligned_cols=159  Identities=21%  Similarity=0.312  Sum_probs=120.3

Q ss_pred             CcccCCCCeeEEEEEEc--CC--CEEEEEEccCCCh-hcHHHHHHHHHHHhhCCCCCccceeeeeecC------------
Q 045092           94 NEISERGFGPVYRGLLA--DG--KVIEVKQLSSKSK-QGNREIVNEIGMISALQHPNLVKLYRLCTET------------  156 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~~--~~--~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------------  156 (307)
                      +.||+|+||.||+|...  ++  ..||||.+..... ...+.+.+|+.++++++|+||+++++++.+.            
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~   80 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLG   80 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCCC
Confidence            46899999999999853  23  3699999976655 5567899999999999999999999876541            


Q ss_pred             --------CC--C-------------------------------------------------------------------
Q 045092          157 --------LK--Q-------------------------------------------------------------------  159 (307)
Q Consensus       157 --------~~--~-------------------------------------------------------------------  159 (307)
                              ..  .                                                                   
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  160 (257)
T cd05040          81 SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHL  160 (257)
T ss_pred             cHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceecccCC
Confidence                    00  0                                                                   


Q ss_pred             --CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 --PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 --t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                        +..|+|||++....++.++|||||||+++||++ |+.|+......      +.........      .....+...+.
T Consensus       161 ~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~------~~~~~~~~~~------~~~~~~~~~~~  228 (257)
T cd05040         161 KVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS------QILKKIDKEG------ERLERPEACPQ  228 (257)
T ss_pred             CCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHhcC------CcCCCCccCCH
Confidence              347999999998899999999999999999999 99998533221      1111111111      11112234566


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHHHhc
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVSMLE  265 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~~L~  265 (307)
                      .+.+++..|+ +.+|.+||++.++++.|.
T Consensus       229 ~~~~li~~~l-~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         229 DIYNVMLQCW-AHNPADRPTFAALREFLP  256 (257)
T ss_pred             HHHHHHHHHC-CCCcccCCCHHHHHHHhc
Confidence            8999999999 999999999999998875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.87  E-value=2.2e-21  Score=179.35  Aligned_cols=177  Identities=15%  Similarity=0.154  Sum_probs=123.6

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC----
Q 045092           86 ATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK----  158 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~----  158 (307)
                      ..++|...+.||+|+||.||++.. .+++.||||++...  .......+.+|+.+++.++|+||+++++++.....    
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~  101 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  101 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence            357899999999999999999994 46889999998643  23334678899999999999999999886542210    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       102 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~  181 (364)
T cd07875         102 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM  181 (364)
T ss_pred             CeEEEEEeCCCCCHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCCc
Confidence                                                                                            


Q ss_pred             -----CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcc------------cHHHHHHHH----HH
Q 045092          159 -----QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKF------------YLLDWLGSY----LK  217 (307)
Q Consensus       159 -----~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~------------~l~~~~~~~----~~  217 (307)
                           .|..|+|||++.+..++.++|||||||++|||++|+.||.........            .+...+...    ..
T Consensus       182 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (364)
T cd07875         182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE  261 (364)
T ss_pred             ccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHh
Confidence                 067899999999999999999999999999999999999643321100            000000000    00


Q ss_pred             hhhhhcc---------c---ccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          218 RARKLNG---------A---SCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       218 ~~~~~~~---------~---~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .......         .   .+..........+.+++.+|+ +.||.+|||+.++++.
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL-~~dP~~R~t~~e~L~h  318 (364)
T cd07875         262 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKML-VIDASKRISVDEALQH  318 (364)
T ss_pred             hCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhc-CcCcccCCCHHHHhcC
Confidence            0000000         0   000111112236789999999 9999999999999764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.87  E-value=6.5e-22  Score=176.25  Aligned_cols=172  Identities=21%  Similarity=0.283  Sum_probs=127.3

Q ss_pred             cccHHHHHHHhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhC-CCCCccceeeeee
Q 045092           77 SFHLRQIKAATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISAL-QHPNLVKLYRLCT  154 (307)
Q Consensus        77 ~~~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~  154 (307)
                      .+.+..+..++++|+..+.||+|+||.||++.. .+++.+|+|.+.... .....+.+|+.++.++ +|+||+++++++.
T Consensus         7 ~~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   85 (286)
T cd06638           7 TIIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYY   85 (286)
T ss_pred             eEEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeee
Confidence            356677778899999999999999999999985 468899999875432 2235688899999999 7999999998763


Q ss_pred             cCCC----------------------------------------------------------------------------
Q 045092          155 ETLK----------------------------------------------------------------------------  158 (307)
Q Consensus       155 ~~~~----------------------------------------------------------------------------  158 (307)
                      ....                                                                            
T Consensus        86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl  165 (286)
T cd06638          86 KKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKL  165 (286)
T ss_pred             ecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEE
Confidence            2100                                                                            


Q ss_pred             --------------------CCccccchhhhcc-----CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHH
Q 045092          159 --------------------QPIVYMAPEYAKH-----GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLG  213 (307)
Q Consensus       159 --------------------~t~~y~aPE~~~~-----~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~  213 (307)
                                          +++.|+|||++..     ..++.++|||||||++|||++|+.|+.......  .+    .
T Consensus       166 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~--~~----~  239 (286)
T cd06638         166 VDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR--AL----F  239 (286)
T ss_pred             ccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH--HH----h
Confidence                                0567999998753     447889999999999999999999985332111  00    0


Q ss_pred             HHHHhhhhhcccccCC--CchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          214 SYLKRARKLNGASCSK--FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       214 ~~~~~~~~~~~~~~~~--l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                         .    ......+.  .+..++..+.+++.+|+ +.||++||++.++++.
T Consensus       240 ---~----~~~~~~~~~~~~~~~~~~~~~li~~~l-~~~p~~Rps~~ell~~  283 (286)
T cd06638         240 ---K----IPRNPPPTLHQPELWSNEFNDFIRKCL-TKDYEKRPTVSDLLQH  283 (286)
T ss_pred             ---h----ccccCCCcccCCCCcCHHHHHHHHHHc-cCCcccCCCHHHHhhc
Confidence               0    00011111  12234557899999999 9999999999999865

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.87  E-value=1.5e-21  Score=173.50  Aligned_cols=160  Identities=21%  Similarity=0.339  Sum_probs=123.7

Q ss_pred             cccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--------
Q 045092           90 FASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--------  159 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--------  159 (307)
                      |+..+.||+|+||.||+|.. .++..||||.+.... ......+.+|+.++.+++|+||+++++++......        
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG   85 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence            66678999999999999985 468899999876432 33346789999999999999999999887654211        


Q ss_pred             ------------------------------------------------------------------------------Cc
Q 045092          160 ------------------------------------------------------------------------------PI  161 (307)
Q Consensus       160 ------------------------------------------------------------------------------t~  161 (307)
                                                                                                    +.
T Consensus        86 ~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  165 (277)
T cd06641          86 GGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTP  165 (277)
T ss_pred             CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccccCCc
Confidence                                                                                          55


Q ss_pred             cccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHH
Q 045092          162 VYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDG  241 (307)
Q Consensus       162 ~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l  241 (307)
                      .|+|||++.++.++.++|||||||++++|++|..|+.....      ..... .      +.....+.+...++..+.++
T Consensus       166 ~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~------~~~~~-~------~~~~~~~~~~~~~~~~~~~~  232 (277)
T cd06641         166 FWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP------MKVLF-L------IPKNNPPTLEGNYSKPLKEF  232 (277)
T ss_pred             cccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch------HHHHH-H------HhcCCCCCCCcccCHHHHHH
Confidence            69999999888899999999999999999999999853221      11111 1      11112233445566789999


Q ss_pred             hccccCCCCCCCCCCHHHHHHH
Q 045092          242 NDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       242 ~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      +..|+ +.+|.+||++.++++.
T Consensus       233 i~~~l-~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         233 VEACL-NKEPSFRPTAKELLKH  253 (277)
T ss_pred             HHHHc-cCChhhCcCHHHHHhC
Confidence            99999 9999999999999874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.87  E-value=7.2e-22  Score=178.37  Aligned_cols=174  Identities=13%  Similarity=0.211  Sum_probs=121.7

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh-hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK-QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      ++|...+.||+|+||.||+|... ++..||+|.++.... .....+.+|+.++.+++|+||+++++++......      
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            56888899999999999999954 678999999874432 2334678999999999999999999987654111      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        86 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  165 (309)
T cd07872          86 LDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEV  165 (309)
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCcccccccc
Confidence                                                                                            


Q ss_pred             -Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHH--------HHHHHHhhhhhcccccCC
Q 045092          160 -PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDW--------LGSYLKRARKLNGASCSK  229 (307)
Q Consensus       160 -t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~~~~~~  229 (307)
                       |+.|+|||.+.+ ..++.++|||||||+++||++|+.||......+.......        .+..+...........+.
T Consensus       166 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (309)
T cd07872         166 VTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPK  245 (309)
T ss_pred             ccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCc
Confidence             667999998865 4688999999999999999999999964332211110000        000000000000000000


Q ss_pred             --------CchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          230 --------FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       230 --------l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                              .....+.+..+++.+|+ +.||.+|||+.++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~li~~~L-~~dp~~R~t~~e~l~  285 (309)
T cd07872         246 YKPQPLINHAPRLDTEGIELLTKFL-QYESKKRISAEEAMK  285 (309)
T ss_pred             cCCCchhhhccCCCHHHHHHHHHhc-cCChhhCCCHHHHhc
Confidence                    01123447889999999 999999999999976

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.86  E-value=2.4e-21  Score=171.08  Aligned_cols=165  Identities=22%  Similarity=0.351  Sum_probs=122.8

Q ss_pred             CcccCCcccCCCCeeEEEEEEc--CCCEEEEEEccCC----------ChhcHHHHHHHHHHHhh-CCCCCccceeeeeec
Q 045092           89 NFASENEISERGFGPVYRGLLA--DGKVIEVKQLSSK----------SKQGNREIVNEIGMISA-LQHPNLVKLYRLCTE  155 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~--~~~~vAvK~~~~~----------~~~~~~~~~~E~~~l~~-l~h~niv~l~g~~~~  155 (307)
                      +|+..+.||+|+||.||+|...  .++.+|+|.+...          .......+.+|+.++.+ ++|+||+++++++.+
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            4778899999999999999964  3688999987532          12234567889988875 699999999997755


Q ss_pred             CCCC----------------------------------------------------------------------------
Q 045092          156 TLKQ----------------------------------------------------------------------------  159 (307)
Q Consensus       156 ~~~~----------------------------------------------------------------------------  159 (307)
                      ....                                                                            
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~  160 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL  160 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence            4110                                                                            


Q ss_pred             ---------------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcc
Q 045092          160 ---------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNG  224 (307)
Q Consensus       160 ---------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  224 (307)
                                     +..|++||++.++.++.++||||||+++|||++|+.|+.....      ...... +..+     
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~------~~~~~~-~~~~-----  228 (269)
T cd08528         161 AKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM------LSLATK-IVEA-----  228 (269)
T ss_pred             eeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH------HHHHHH-Hhhc-----
Confidence                           5679999999998999999999999999999999999853221      111111 1111     


Q ss_pred             cccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          225 ASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       225 ~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      ...+.....++..+.+++.+|+ +.||++||++.++..++.+
T Consensus       229 ~~~~~~~~~~~~~l~~li~~cl-~~~p~~Rp~~~e~~~~~~~  269 (269)
T cd08528         229 VYEPLPEGMYSEDVTDVITSCL-TPDAEARPDIIQVSAMISD  269 (269)
T ss_pred             cCCcCCcccCCHHHHHHHHHHC-CCCCccCCCHHHHHHHhcC
Confidence            1112122245568899999999 9999999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.86  E-value=1e-21  Score=174.73  Aligned_cols=170  Identities=19%  Similarity=0.311  Sum_probs=128.2

Q ss_pred             ccHHHHHHHhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhC-CCCCccceeeeeec
Q 045092           78 FHLRQIKAATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISAL-QHPNLVKLYRLCTE  155 (307)
Q Consensus        78 ~~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~  155 (307)
                      .++.++..+.+.|+..+.||.|+||.||+|.. .+++.+|+|.+.... .....+..|+.++.++ +|+||+++++++..
T Consensus         6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   84 (282)
T cd06636           6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK   84 (282)
T ss_pred             hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence            57778878889999999999999999999995 478899999885442 3345788999999998 79999999988742


Q ss_pred             CCC-----------------------------------------------------------------------------
Q 045092          156 TLK-----------------------------------------------------------------------------  158 (307)
Q Consensus       156 ~~~-----------------------------------------------------------------------------  158 (307)
                      ...                                                                             
T Consensus        85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~d  164 (282)
T cd06636          85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVD  164 (282)
T ss_pred             ccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEee
Confidence            100                                                                             


Q ss_pred             ------------------CCccccchhhhc-----cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHH
Q 045092          159 ------------------QPIVYMAPEYAK-----HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSY  215 (307)
Q Consensus       159 ------------------~t~~y~aPE~~~-----~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~  215 (307)
                                        .+..|+|||.+.     +..++.++|||||||++|||++|+.||........      .   
T Consensus       165 fg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~------~---  235 (282)
T cd06636         165 FGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA------L---  235 (282)
T ss_pred             CcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh------h---
Confidence                              045699999876     34688899999999999999999999953321111      0   


Q ss_pred             HHhhhhhcccccCCC-chhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          216 LKRARKLNGASCSKF-GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       216 ~~~~~~~~~~~~~~l-~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ..    +.....+.+ ...++..+.+++..|+ ..||.+||++.++++
T Consensus       236 ~~----~~~~~~~~~~~~~~~~~~~~li~~cl-~~~p~~Rp~~~ell~  278 (282)
T cd06636         236 FL----IPRNPPPKLKSKKWSKKFIDFIEGCL-VKNYLSRPSTEQLLK  278 (282)
T ss_pred             hh----HhhCCCCCCcccccCHHHHHHHHHHh-CCChhhCcCHHHHhc
Confidence            00    111111111 2345668999999999 999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.86  E-value=5.4e-22  Score=180.58  Aligned_cols=154  Identities=19%  Similarity=0.187  Sum_probs=118.3

Q ss_pred             CcccCCCCeeEEEEEE-cCCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----------
Q 045092           94 NEISERGFGPVYRGLL-ADGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----------  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----------  159 (307)
                      +.||+|+||.||++.. .+|..||+|.+...   .......+.+|+.++.+++||||+++++++......          
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            4699999999999995 47899999998643   223345678899999999999999999877654110          


Q ss_pred             -----------------------------------------------------------------------------Ccc
Q 045092          160 -----------------------------------------------------------------------------PIV  162 (307)
Q Consensus       160 -----------------------------------------------------------------------------t~~  162 (307)
                                                                                                   |+.
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~  160 (323)
T cd05595          81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE  160 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCcC
Confidence                                                                                         678


Q ss_pred             ccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHh
Q 045092          163 YMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGN  242 (307)
Q Consensus       163 y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~  242 (307)
                      |+|||++.++.++.++|||||||++|||++|+.||.......   +   ... +.       .....++..++..+.+++
T Consensus       161 y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~---~---~~~-~~-------~~~~~~p~~~~~~~~~li  226 (323)
T cd05595         161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER---L---FEL-IL-------MEEIRFPRTLSPEAKSLL  226 (323)
T ss_pred             cCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHH---H---HHH-Hh-------cCCCCCCCCCCHHHHHHH
Confidence            999999999999999999999999999999999995332111   1   111 11       111233445667889999


Q ss_pred             ccccCCCCCCCCC-----CHHHHHH
Q 045092          243 DQCSSSVTPTNRP-----LMSFVVS  262 (307)
Q Consensus       243 ~~C~~~~dP~~RP-----s~~~vl~  262 (307)
                      ..|+ +.||.+||     ++.++++
T Consensus       227 ~~~L-~~dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         227 AGLL-KKDPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             HHHc-cCCHHHhCCCCCCCHHHHHc
Confidence            9999 99999998     7888765

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.86  E-value=1.3e-21  Score=175.59  Aligned_cols=165  Identities=18%  Similarity=0.233  Sum_probs=124.4

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      .++|...+.||+|+||.||++.. .++..||+|.+........+.+.+|+.++++++|+||+++++++......      
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~   97 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY   97 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence            36788889999999999999984 47889999998655444556789999999999999999999887554110      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        98 ~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~~  177 (293)
T cd06647          98 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG  177 (293)
T ss_pred             CCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccccccccccC
Confidence                                                                                            


Q ss_pred             CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHH
Q 045092          160 PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTS  239 (307)
Q Consensus       160 t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  239 (307)
                      ++.|+|||++..+.++.++||||||+++|++++|+.||.........      ......+.  .   ........+..+.
T Consensus       178 ~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~------~~~~~~~~--~---~~~~~~~~~~~l~  246 (293)
T cd06647         178 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL------YLIATNGT--P---ELQNPEKLSAIFR  246 (293)
T ss_pred             ChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhe------eehhcCCC--C---CCCCccccCHHHH
Confidence            44599999998888999999999999999999999999643321110      00000000  0   0001223445788


Q ss_pred             HHhccccCCCCCCCCCCHHHHHHH
Q 045092          240 DGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       240 ~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      +++..|+ ..+|++||++.+++.+
T Consensus       247 ~li~~~l-~~~p~~Rp~~~~il~h  269 (293)
T cd06647         247 DFLNRCL-EMDVEKRGSAKELLQH  269 (293)
T ss_pred             HHHHHHc-cCChhhCcCHHHHhcC
Confidence            9999999 9999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.86  E-value=1e-21  Score=180.05  Aligned_cols=175  Identities=14%  Similarity=0.137  Sum_probs=121.4

Q ss_pred             HHhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC---
Q 045092           85 AATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK---  158 (307)
Q Consensus        85 ~~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~---  158 (307)
                      ...++|...+.||+|+||.||+|.. .++..||||.+....  ......+.+|+.++++++|+||+++++++.....   
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07878          12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN   91 (343)
T ss_pred             hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence            3457899999999999999999984 578899999986532  2234567899999999999999999876542200   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        92 ~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~  171 (343)
T cd07878          92 FNEVYLVTNLMGADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDE  171 (343)
T ss_pred             cCcEEEEeecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCCC
Confidence                                                                                            


Q ss_pred             -----CCccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHH------------Hhh-
Q 045092          159 -----QPIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYL------------KRA-  219 (307)
Q Consensus       159 -----~t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~------------~~~-  219 (307)
                           .|+.|+|||++.+ ..++.++|||||||++++|++|+.||.......  .+.. +....            ... 
T Consensus       172 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~  248 (343)
T cd07878         172 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYID--QLKR-IMEVVGTPSPEVLKKISSEHA  248 (343)
T ss_pred             cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH--HHHH-HHHHhCCCCHHHHHhcchhhH
Confidence                 0678999999876 568999999999999999999999995432111  0000 00000            000 


Q ss_pred             -hhh---cccccCCC---chhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          220 -RKL---NGASCSKF---GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       220 -~~~---~~~~~~~l---~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                       ...   .......+   .......+.+++.+|+ ..||.+||++.+++..
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL-~~dp~~R~s~~ell~h  298 (343)
T cd07878         249 RKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKML-VLDSDKRISASEALAH  298 (343)
T ss_pred             HHHhhccccccchhHHHhccCCCHHHHHHHHHHc-CCChhhCCCHHHHhcC
Confidence             000   00000000   0112335789999999 9999999999999853

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.86  E-value=2.8e-21  Score=169.46  Aligned_cols=161  Identities=20%  Similarity=0.395  Sum_probs=124.7

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCC--------
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETL--------  157 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~--------  157 (307)
                      +|+..+.||.|+||.||++.. .++..||+|.+...  .....+.+.+|++++++++|+||+++++++....        
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            477789999999999999984 47889999998643  2334567899999999999999999988664320        


Q ss_pred             -----------------------------------------C-----C--------------------------------
Q 045092          158 -----------------------------------------K-----Q--------------------------------  159 (307)
Q Consensus       158 -----------------------------------------~-----~--------------------------------  159 (307)
                                                               +     .                                
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~  160 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL  160 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence                                                     0     0                                


Q ss_pred             ------------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhccccc
Q 045092          160 ------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC  227 (307)
Q Consensus       160 ------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  227 (307)
                                  +..|+|||.+.++.++.++||||||+++++|++|+.|+.....   ..+.    ..      +.....
T Consensus       161 ~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~----~~------~~~~~~  227 (265)
T cd08217         161 GHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ---LQLA----SK------IKEGKF  227 (265)
T ss_pred             cCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH---HHHH----HH------HhcCCC
Confidence                        5679999999988899999999999999999999999964321   1111    11      122223


Q ss_pred             CCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          228 SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       228 ~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      +.++..++..+.+++..|+ +.+|++||++.+|+++
T Consensus       228 ~~~~~~~~~~~~~l~~~~l-~~~p~~Rp~~~~il~~  262 (265)
T cd08217         228 RRIPYRYSSELNEVIKSML-NVDPDKRPSTEELLQL  262 (265)
T ss_pred             CCCccccCHHHHHHHHHHc-cCCcccCCCHHHHhhC
Confidence            3444556678999999999 9999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.86  E-value=1.4e-21  Score=176.25  Aligned_cols=168  Identities=23%  Similarity=0.308  Sum_probs=125.7

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc--------CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhC-CCCCccceeeeeecC
Q 045092           87 TNNFASENEISERGFGPVYRGLLA--------DGKVIEVKQLSSKS-KQGNREIVNEIGMISAL-QHPNLVKLYRLCTET  156 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~--------~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~  156 (307)
                      .++|.+.+.||+|+||.||++...        +...+|+|.+.... ......+.+|+.++.++ +|+||++++++|...
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   96 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   96 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence            457889999999999999999742        23569999987542 33456788999999999 799999999875432


Q ss_pred             CC-------------------------------------C----------------------------------------
Q 045092          157 LK-------------------------------------Q----------------------------------------  159 (307)
Q Consensus       157 ~~-------------------------------------~----------------------------------------  159 (307)
                      ..                                     .                                        
T Consensus        97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~  176 (307)
T cd05098          97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED  176 (307)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCC
Confidence            00                                     0                                        


Q ss_pred             ----------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHH
Q 045092          160 ----------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLD  210 (307)
Q Consensus       160 ----------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~  210 (307)
                                                  ++.|+|||++.++.++.++|||||||++|||++ |+.|+.....      .+
T Consensus       177 ~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~------~~  250 (307)
T cd05098         177 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV------EE  250 (307)
T ss_pred             CcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH------HH
Confidence                                        246999999998889999999999999999998 8888853221      11


Q ss_pred             HHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          211 WLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                       +...+..+      .....+...+..+.+++..|+ ..+|.+||++.+|++.|..+.
T Consensus       251 -~~~~~~~~------~~~~~~~~~~~~~~~li~~~l-~~~p~~Rps~~evl~~l~~~~  300 (307)
T cd05098         251 -LFKLLKEG------HRMDKPSNCTNELYMMMRDCW-HAVPSQRPTFKQLVEDLDRIL  300 (307)
T ss_pred             -HHHHHHcC------CCCCCCCcCCHHHHHHHHHHc-ccChhhCcCHHHHHHHHHHHH
Confidence             11111111      112223345668899999999 999999999999999998754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.86  E-value=1.3e-21  Score=172.73  Aligned_cols=159  Identities=26%  Similarity=0.432  Sum_probs=119.4

Q ss_pred             CcccCCCCeeEEEEEEcC-------CCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           94 NEISERGFGPVYRGLLAD-------GKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~~~-------~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      +.||+|+||.||+|...+       +..+|||.+.... ......+.+|+.+++.++|+||+++++++......      
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            469999999999998532       2579999886543 23456799999999999999999999887543100      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~  160 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD  160 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence                                                                                            


Q ss_pred             ---------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhc
Q 045092          160 ---------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLN  223 (307)
Q Consensus       160 ---------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  223 (307)
                                     +..|+|||++.++.++.++|||||||++|||++ |+.||......   ....    .+..     
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~---~~~~----~~~~-----  228 (269)
T cd05044         161 IYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ---EVLQ----HVTA-----  228 (269)
T ss_pred             cccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH---HHHH----HHhc-----
Confidence                           246999999999999999999999999999998 99998532211   1111    1111     


Q ss_pred             ccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          224 GASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       224 ~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                       ......+...+..+.+++.+|+ ..+|.+||++.++++.|++
T Consensus       229 -~~~~~~~~~~~~~~~~li~~~l-~~~p~~Rp~~~~i~~~l~~  269 (269)
T cd05044         229 -GGRLQKPENCPDKIYQLMTNCW-AQDPSERPTFDRIQEILQN  269 (269)
T ss_pred             -CCccCCcccchHHHHHHHHHHc-CCCcccCCCHHHHHHHHhC
Confidence             1111223345668899999999 9999999999999998863

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.86  E-value=1.3e-21  Score=178.63  Aligned_cols=161  Identities=16%  Similarity=0.140  Sum_probs=120.2

Q ss_pred             CcccCCCCeeEEEEEE-cCCCEEEEEEccCC---ChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCCC---------
Q 045092           94 NEISERGFGPVYRGLL-ADGKVIEVKQLSSK---SKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLKQ---------  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~---------  159 (307)
                      +.||+|+||.||++.. .+++.||||.++..   .....+.+.+|+.++.++ +||||+++++++.+....         
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            4689999999999995 47889999998753   223345688999999998 799999999987654110         


Q ss_pred             ------------------------------------------------------------------------------Cc
Q 045092          160 ------------------------------------------------------------------------------PI  161 (307)
Q Consensus       160 ------------------------------------------------------------------------------t~  161 (307)
                                                                                                    |+
T Consensus        81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~  160 (329)
T cd05588          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTP  160 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCCc
Confidence                                                                                          66


Q ss_pred             cccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccC--cccHHHHHHHHHHhhhhhcccccCCCchhhHHHHH
Q 045092          162 VYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKED--KFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTS  239 (307)
Q Consensus       162 ~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  239 (307)
                      .|+|||++.+..++.++|||||||++|||++|+.||.......  .....++....+...       ...++..++..+.
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~p~~~~~~~~  233 (329)
T cd05588         161 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK-------QIRIPRSLSVKAS  233 (329)
T ss_pred             cccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcC-------CCCCCCCCCHHHH
Confidence            7999999999999999999999999999999999996432211  111223333322221       1233445666889


Q ss_pred             HHhccccCCCCCCCCCC------HHHHHH
Q 045092          240 DGNDQCSSSVTPTNRPL------MSFVVS  262 (307)
Q Consensus       240 ~l~~~C~~~~dP~~RPs------~~~vl~  262 (307)
                      +++..|+ +.||.+||+      +.++++
T Consensus       234 ~li~~~L-~~dP~~R~~~~~~~~~~~i~~  261 (329)
T cd05588         234 SVLKGFL-NKDPKERLGCHPQTGFRDIKS  261 (329)
T ss_pred             HHHHHHh-ccCHHHcCCCCCCCCHHHHhc
Confidence            9999999 999999997      567654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.86  E-value=1.4e-21  Score=176.34  Aligned_cols=162  Identities=20%  Similarity=0.322  Sum_probs=121.6

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      +.|...+.||+|+||.||+|... +++.||+|.+....   ......+.+|+.++..++|+||++++++|.+....    
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~   94 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM   94 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence            45778899999999999999954 68999999886432   23345789999999999999999999988654110    


Q ss_pred             -------------------------------------------------------------------------------C
Q 045092          160 -------------------------------------------------------------------------------P  160 (307)
Q Consensus       160 -------------------------------------------------------------------------------t  160 (307)
                                                                                                     +
T Consensus        95 e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~~~~  174 (307)
T cd06607          95 EYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFVGT  174 (307)
T ss_pred             HhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCCCCccCC
Confidence                                                                                           5


Q ss_pred             ccccchhhhc---cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC-chhhHH
Q 045092          161 IVYMAPEYAK---HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF-GFKFYR  236 (307)
Q Consensus       161 ~~y~aPE~~~---~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l-~~~~~~  236 (307)
                      ..|+|||++.   .+.++.++||||||+++|||++|+.|+.......      ....       +.....+.+ ...++.
T Consensus       175 ~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~------~~~~-------~~~~~~~~~~~~~~~~  241 (307)
T cd06607         175 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS------ALYH-------IAQNDSPTLSSNDWSD  241 (307)
T ss_pred             ccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH------HHHH-------HhcCCCCCCCchhhCH
Confidence            6799999874   4668899999999999999999999985322111      0111       111111222 223556


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .+.+++.+|+ ..+|++||++.+|+..
T Consensus       242 ~~~~li~~~l-~~~p~~Rp~~~~il~~  267 (307)
T cd06607         242 YFRNFVDSCL-QKIPQDRPSSEELLKH  267 (307)
T ss_pred             HHHHHHHHHh-cCChhhCcCHHHHhcC
Confidence            8899999999 9999999999999764

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.86  E-value=4.2e-21  Score=169.71  Aligned_cols=162  Identities=23%  Similarity=0.303  Sum_probs=116.2

Q ss_pred             CcccCCCCeeEEEEEEc---CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----------
Q 045092           94 NEISERGFGPVYRGLLA---DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----------  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~~---~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----------  159 (307)
                      +.||+|+||.||+|...   ++..+|+|.++... ......+.+|+.++.+++|+||+++++++.+....          
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            36899999999999853   34579999886543 23345789999999999999999999987543110          


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~  160 (269)
T cd05087          81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPD  160 (269)
T ss_pred             cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecCC
Confidence                                                                                            


Q ss_pred             ----CccccchhhhccC-------CCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhccccc
Q 045092          160 ----PIVYMAPEYAKHG-------YLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC  227 (307)
Q Consensus       160 ----t~~y~aPE~~~~~-------~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  227 (307)
                          +..|+|||++.+.       .++.++||||||+++|||++ |+.||......+   .   ...... .. ......
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~---~---~~~~~~-~~-~~~~~~  232 (269)
T cd05087         161 QLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ---V---LTYTVR-EQ-QLKLPK  232 (269)
T ss_pred             CcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH---H---HHHHhh-cc-cCCCCC
Confidence                3459999988642       35789999999999999996 999995332211   1   111111 11 223333


Q ss_pred             CCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhc
Q 045092          228 SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLE  265 (307)
Q Consensus       228 ~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~  265 (307)
                      +.+....+..+.+++..|+ . +|++||++.+|+..|+
T Consensus       233 ~~~~~~~~~~~~~l~~~c~-~-~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         233 PRLKLPLSDRWYEVMQFCW-L-QPEQRPSAEEVHLLLS  268 (269)
T ss_pred             CccCCCCChHHHHHHHHHh-c-CcccCCCHHHHHHHhc
Confidence            4444445567888999998 5 7999999999998875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.86  E-value=1.9e-21  Score=170.31  Aligned_cols=161  Identities=16%  Similarity=0.218  Sum_probs=123.4

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      +|+..+.||+|+||.||++.. .+++.||+|.+....  ....+.+.+|++++++++|+|++++++.+......      
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            578889999999999999995 467899999986432  23455789999999999999999998765422100      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~  160 (257)
T cd08223          81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAS  160 (257)
T ss_pred             ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCCccc
Confidence                                                                                            


Q ss_pred             ----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhH
Q 045092          160 ----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFY  235 (307)
Q Consensus       160 ----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  235 (307)
                          ++.|+|||++.++.++.++||||||+++++|++|+.||.....      ...... +..+      ..+.++...+
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~------~~~~~~-~~~~------~~~~~~~~~~  227 (257)
T cd08223         161 TLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM------NSLVYR-IIEG------KLPPMPKDYS  227 (257)
T ss_pred             cccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH------HHHHHH-HHhc------CCCCCccccC
Confidence                5679999999999999999999999999999999999863221      111111 1111      1123344566


Q ss_pred             HHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          236 RRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       236 ~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ..+.+++.+|+ +.+|++||++.++++.
T Consensus       228 ~~~~~li~~~l-~~~p~~Rp~~~~~l~~  254 (257)
T cd08223         228 PELGELIATML-SKRPEKRPSVKSILRQ  254 (257)
T ss_pred             HHHHHHHHHHh-ccCcccCCCHHHHhcC
Confidence            78999999999 9999999999999753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.86  E-value=1.1e-21  Score=175.34  Aligned_cols=174  Identities=24%  Similarity=0.327  Sum_probs=128.5

Q ss_pred             cccHHHHHHHhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhC-CCCCccceeeeee
Q 045092           77 SFHLRQIKAATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISAL-QHPNLVKLYRLCT  154 (307)
Q Consensus        77 ~~~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~  154 (307)
                      .+++.++..++++|...+.||+|+||.||++.. .+++.+|+|.+.... .....+.+|+.++.++ +|+|++++++++.
T Consensus        11 ~~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   89 (291)
T cd06639          11 MLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFY   89 (291)
T ss_pred             hhhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEE
Confidence            467778888899999999999999999999995 478899999986432 2345678899999999 8999999998775


Q ss_pred             cCCC------------------------------C---------------------------------------------
Q 045092          155 ETLK------------------------------Q---------------------------------------------  159 (307)
Q Consensus       155 ~~~~------------------------------~---------------------------------------------  159 (307)
                      ....                              .                                             
T Consensus        90 ~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl  169 (291)
T cd06639          90 KADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKL  169 (291)
T ss_pred             eccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEE
Confidence            3210                              0                                             


Q ss_pred             ---------------------CccccchhhhccCC-----CCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHH
Q 045092          160 ---------------------PIVYMAPEYAKHGY-----LTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLG  213 (307)
Q Consensus       160 ---------------------t~~y~aPE~~~~~~-----~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~  213 (307)
                                           +..|+|||++..+.     ++.++|||||||++|||++|+.|+.......  .    +.
T Consensus       170 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~--~----~~  243 (291)
T cd06639         170 VDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK--T----LF  243 (291)
T ss_pred             eecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH--H----HH
Confidence                                 46799999886543     6889999999999999999999985332111  1    11


Q ss_pred             HHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          214 SYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       214 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      . +.... .....   .+......+.+++.+|+ +.+|++||++.++++.
T Consensus       244 ~-~~~~~-~~~~~---~~~~~~~~l~~li~~~l-~~~p~~Rps~~~il~~  287 (291)
T cd06639         244 K-IPRNP-PPTLL---HPEKWCRSFNHFISQCL-IKDFEARPSVTHLLEH  287 (291)
T ss_pred             H-HhcCC-CCCCC---cccccCHHHHHHHHHHh-hcChhhCcCHHHHhcC
Confidence            1 11110 01111   12234457899999999 9999999999999753

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.86  E-value=1.3e-21  Score=175.83  Aligned_cols=160  Identities=19%  Similarity=0.234  Sum_probs=120.3

Q ss_pred             cCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----------
Q 045092           92 SENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----------  159 (307)
Q Consensus        92 ~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----------  159 (307)
                      ....||+|+||.||++.. .+++.||+|.+........+.+.+|+.++..++|+||+++++++......           
T Consensus        25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~  104 (297)
T cd06659          25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA  104 (297)
T ss_pred             hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence            345799999999999985 47899999998655444556789999999999999999999876544110           


Q ss_pred             ---------------------------------------------------------------------------Ccccc
Q 045092          160 ---------------------------------------------------------------------------PIVYM  164 (307)
Q Consensus       160 ---------------------------------------------------------------------------t~~y~  164 (307)
                                                                                                 +..|+
T Consensus       105 L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~  184 (297)
T cd06659         105 LTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWM  184 (297)
T ss_pred             HHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCcccc
Confidence                                                                                       56799


Q ss_pred             chhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhcc
Q 045092          165 APEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQ  244 (307)
Q Consensus       165 aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~  244 (307)
                      |||++.+..++.++|||||||+++||++|+.||.......      ... .+...    ...........+..+.+++..
T Consensus       185 aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~------~~~-~~~~~----~~~~~~~~~~~~~~l~~~i~~  253 (297)
T cd06659         185 APEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ------AMK-RLRDS----PPPKLKNAHKISPVLRDFLER  253 (297)
T ss_pred             CHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHH-HHhcc----CCCCccccCCCCHHHHHHHHH
Confidence            9999998889999999999999999999999996322111      111 11110    000111122345578899999


Q ss_pred             ccCCCCCCCCCCHHHHHHH
Q 045092          245 CSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       245 C~~~~dP~~RPs~~~vl~~  263 (307)
                      |+ +.+|.+||++.++++.
T Consensus       254 ~l-~~~P~~Rps~~~ll~~  271 (297)
T cd06659         254 ML-TREPQERATAQELLDH  271 (297)
T ss_pred             Hh-cCCcccCcCHHHHhhC
Confidence            99 9999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.86  E-value=1.5e-21  Score=175.77  Aligned_cols=168  Identities=23%  Similarity=0.320  Sum_probs=126.0

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc--------CCCEEEEEEccCC-ChhcHHHHHHHHHHHhhC-CCCCccceeeeeecC
Q 045092           87 TNNFASENEISERGFGPVYRGLLA--------DGKVIEVKQLSSK-SKQGNREIVNEIGMISAL-QHPNLVKLYRLCTET  156 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~--------~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~  156 (307)
                      .++|.+.+.||+|+||.||++...        ++..||+|.+... .....+.+.+|+.++..+ +|+||+++++++...
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   93 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   93 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence            567888899999999999999731        2357999998643 234456799999999999 899999999876432


Q ss_pred             CCC-----------------------------------------------------------------------------
Q 045092          157 LKQ-----------------------------------------------------------------------------  159 (307)
Q Consensus       157 ~~~-----------------------------------------------------------------------------  159 (307)
                      ...                                                                             
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~  173 (304)
T cd05101          94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTEN  173 (304)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCC
Confidence            000                                                                             


Q ss_pred             ----------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHH
Q 045092          160 ----------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLD  210 (307)
Q Consensus       160 ----------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~  210 (307)
                                                  ++.|+|||++.++.++.++||||||+++|||++ |..|+....      ..+
T Consensus       174 ~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------~~~  247 (304)
T cd05101         174 NVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------VEE  247 (304)
T ss_pred             CcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC------HHH
Confidence                                        356999999988889999999999999999998 788874322      111


Q ss_pred             HHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          211 WLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                       +...+..+      .....+..++..+.+++.+|+ +.+|.+||++.++++.|..+.
T Consensus       248 -~~~~~~~~------~~~~~~~~~~~~~~~li~~cl-~~~p~~Rps~~e~l~~l~~~~  297 (304)
T cd05101         248 -LFKLLKEG------HRMDKPANCTNELYMMMRDCW-HAIPSHRPTFKQLVEDLDRIL  297 (304)
T ss_pred             -HHHHHHcC------CcCCCCCCCCHHHHHHHHHHc-ccChhhCCCHHHHHHHHHHHH
Confidence             11111111      111223345668999999999 999999999999999997753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.86  E-value=4.6e-22  Score=174.93  Aligned_cols=156  Identities=19%  Similarity=0.297  Sum_probs=115.4

Q ss_pred             CcccCCCCeeEEEEEEc-C-------CCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           94 NEISERGFGPVYRGLLA-D-------GKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~~-~-------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      +.||+|+||.||+|... .       ...||+|.+........+.+.+|+.++..++|+||+++++++..+...      
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            46999999999999853 2       234888888655445556889999999999999999999988764111      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~  160 (258)
T cd05078          81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLP  160 (258)
T ss_pred             CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCC
Confidence                                                                                            


Q ss_pred             ------CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCC-CCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCc
Q 045092          160 ------PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGR-SNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFG  231 (307)
Q Consensus       160 ------t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~-~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~  231 (307)
                            ++.|+|||++.++ .++.++||||||+++|||++|. .|+.......      . ..... .       ...++
T Consensus       161 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~------~-~~~~~-~-------~~~~~  225 (258)
T cd05078         161 KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK------K-LQFYE-D-------RHQLP  225 (258)
T ss_pred             chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH------H-HHHHH-c-------cccCC
Confidence                  5679999998864 5799999999999999999985 5543211110      0 00000 0       12233


Q ss_pred             hhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhc
Q 045092          232 FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLE  265 (307)
Q Consensus       232 ~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~  265 (307)
                      .....++.+++..|+ +.+|++||++.++++.|+
T Consensus       226 ~~~~~~~~~li~~~l-~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         226 APKWTELANLINQCM-DYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             CCCcHHHHHHHHHHh-ccChhhCCCHHHHHHhcC
Confidence            334457899999999 999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.86  E-value=1.7e-21  Score=170.39  Aligned_cols=161  Identities=18%  Similarity=0.268  Sum_probs=123.1

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      +|+..+.||+|+||.||++.. .++..+|||.+...  .......+.+|+.++++++|+||+++++.+......      
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            477889999999999999984 47889999998643  233456799999999999999999999866433100      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~  160 (256)
T cd08220          81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYT  160 (256)
T ss_pred             CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccc
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 ---PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 ---t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                         +..|+|||.+....++.++||||||+++++|++|+.|+.....      ........       ......++..++.
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~------~~~~~~~~-------~~~~~~~~~~~~~  227 (256)
T cd08220         161 VVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL------PALVLKIM-------SGTFAPISDRYSP  227 (256)
T ss_pred             cccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch------HHHHHHHH-------hcCCCCCCCCcCH
Confidence               5579999999888899999999999999999999999854321      11111111       1111223344566


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .+.+++..|+ +.+|.+||++.++++.
T Consensus       228 ~l~~li~~~l-~~~p~~Rpt~~~ll~~  253 (256)
T cd08220         228 DLRQLILSML-NLDPSKRPQLSQIMAQ  253 (256)
T ss_pred             HHHHHHHHHc-cCChhhCCCHHHHhhC
Confidence            8999999999 9999999999999763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.86  E-value=2.4e-21  Score=178.83  Aligned_cols=108  Identities=17%  Similarity=0.218  Sum_probs=89.5

Q ss_pred             HHhcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           85 AATNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        85 ~~t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      ....+|...+.||+|+||.||+|... ++..||+|.....      ....|+.++.+++|+||+++++++......    
T Consensus        63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  136 (357)
T PHA03209         63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL  136 (357)
T ss_pred             hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence            34568999999999999999999954 6788999975332      235699999999999999999887654210    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       137 e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~  216 (357)
T PHA03209        137 PHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGL  216 (357)
T ss_pred             EccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCcccccc
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCc
Q 045092          160 --PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVI  198 (307)
Q Consensus       160 --t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~  198 (307)
                        |+.|+|||++.++.++.++|||||||++|||+++..|+.
T Consensus       217 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f  257 (357)
T PHA03209        217 AGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIF  257 (357)
T ss_pred             cccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccc
Confidence              678999999999999999999999999999999766553

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.86  E-value=6.8e-22  Score=181.33  Aligned_cols=162  Identities=16%  Similarity=0.124  Sum_probs=122.7

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-C-CCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-D-GKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~-~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      .++|...+.||+|+||.||+|... + +..||+|.+...   .....+.+.+|+.++..++||||+++++++.+....  
T Consensus        29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l  108 (340)
T PTZ00426         29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL  108 (340)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence            457888899999999999999853 3 368999988543   223345788999999999999999999988665210  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       109 v~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~~  188 (340)
T PTZ00426        109 VLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYTL  188 (340)
T ss_pred             EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCCccee
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHH
Q 045092          160 --PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRR  237 (307)
Q Consensus       160 --t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  237 (307)
                        |+.|+|||++.+..++.++|||||||++|||++|+.||......   .    ....+..+.       ..++...+..
T Consensus       189 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~---~----~~~~i~~~~-------~~~p~~~~~~  254 (340)
T PTZ00426        189 CGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL---L----IYQKILEGI-------IYFPKFLDNN  254 (340)
T ss_pred             cCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH---H----HHHHHhcCC-------CCCCCCCCHH
Confidence              77899999999888999999999999999999999999643211   1    111111111       1223344557


Q ss_pred             HHHHhccccCCCCCCCCC-----CHHHHHHH
Q 045092          238 TSDGNDQCSSSVTPTNRP-----LMSFVVSM  263 (307)
Q Consensus       238 ~~~l~~~C~~~~dP~~RP-----s~~~vl~~  263 (307)
                      +.+++..|+ +.||.+|+     +++++++.
T Consensus       255 ~~~li~~~l-~~dp~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        255 CKHLMKKLL-SHDLTKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             HHHHHHHHc-ccCHHHcCCCCCCCHHHHHcC
Confidence            889999999 99999995     78888654

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.86  E-value=2e-21  Score=187.97  Aligned_cols=165  Identities=18%  Similarity=0.224  Sum_probs=128.5

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCC-CEEEEEEccCCChhcHHHHHHHHHHHhhCC-CCCccceeeeeecCC---C--C
Q 045092           87 TNNFASENEISERGFGPVYRGLLADG-KVIEVKQLSSKSKQGNREIVNEIGMISALQ-HPNLVKLYRLCTETL---K--Q  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~-~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~---~--~  159 (307)
                      ..+..+.+.|.+|||+.||++....+ ..+|+|++...+....+.+.+||++|+.|. |+|||.+++......   .  .
T Consensus        36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~  115 (738)
T KOG1989|consen   36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW  115 (738)
T ss_pred             CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence            34567789999999999999996544 999999988778888899999999999995 999999998321110   0  0


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       116 EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt  195 (738)
T KOG1989|consen  116 EVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATT  195 (738)
T ss_pred             EEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccccc
Confidence                                                                                            


Q ss_pred             ----------------------Cccccchhhhc---cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHH
Q 045092          160 ----------------------PIVYMAPEYAK---HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGS  214 (307)
Q Consensus       160 ----------------------t~~y~aPE~~~---~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~  214 (307)
                                            |+.|.+||.+.   +..+++|+|||++||+||-|+....||+........        
T Consensus       196 ~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIl--------  267 (738)
T KOG1989|consen  196 KILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAIL--------  267 (738)
T ss_pred             ccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEE--------
Confidence                                  99999999775   567999999999999999999999999643211100        


Q ss_pred             HHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          215 YLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       215 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                         .+    ...-|.. ..+...+.+|+..|+ +.||.+||++-||+..+..+.
T Consensus       268 ---ng----~Y~~P~~-p~ys~~l~~LI~~mL-~~nP~~RPnI~Qv~~~~~~l~  312 (738)
T KOG1989|consen  268 ---NG----NYSFPPF-PNYSDRLKDLIRTML-QPNPDERPNIYQVLEEIFELA  312 (738)
T ss_pred             ---ec----cccCCCC-ccHHHHHHHHHHHHh-ccCcccCCCHHHHHHHHHHHh
Confidence               00    0111111 357779999999999 999999999999988765543

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.86  E-value=4.3e-21  Score=171.08  Aligned_cols=173  Identities=20%  Similarity=0.232  Sum_probs=125.9

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-----cCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           88 NNFASENEISERGFGPVYRGLL-----ADGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-----~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      ..|...+.||+|+||.||++..     .++..||+|.++... ......+.+|++++++++|+||+++++++......  
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI   83 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence            3467789999999999999974     257889999987543 33456799999999999999999999987653110  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        84 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~  163 (284)
T cd05079          84 KLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK  163 (284)
T ss_pred             EEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCc
Confidence                                                                                            


Q ss_pred             -----------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCcc--------CcccHHHHHHHHHHhhh
Q 045092          160 -----------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKE--------DKFYLLDWLGSYLKRAR  220 (307)
Q Consensus       160 -----------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~--------~~~~l~~~~~~~~~~~~  220 (307)
                                 +..|+|||++.++.++.++||||||++++||++++.|.......        ...............+ 
T Consensus       164 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  242 (284)
T cd05079         164 EYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEG-  242 (284)
T ss_pred             cceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcC-
Confidence                       23599999999888999999999999999999987765321100        0000011111111111 


Q ss_pred             hhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          221 KLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       221 ~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                           .....+..++..+.+++.+|+ +.+|.+||++.++++.|+.+
T Consensus       243 -----~~~~~~~~~~~~~~~li~~~l-~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         243 -----KRLPRPPNCPEEVYQLMRKCW-EFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             -----ccCCCCCCCCHHHHHHHHHHc-cCCcccCcCHHHHHHHHHhh
Confidence                 111223446678999999999 99999999999999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.86  E-value=2.9e-21  Score=172.30  Aligned_cols=166  Identities=19%  Similarity=0.251  Sum_probs=120.5

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCC-CCCccceeeeeecCCCC------
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS-KQGNREIVNEIGMISALQ-HPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~------  159 (307)
                      +|...+.||+|+||.||++.. .+++.||+|.+.... ......+.+|+.++.++. |+||+++++++......      
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~   84 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL   84 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence            455668899999999999995 468999999986432 234557899999999995 99999999876432100      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        85 ~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~  164 (288)
T cd06616          85 MDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAK  164 (288)
T ss_pred             ccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCcc
Confidence                                                                                            


Q ss_pred             -----CccccchhhhccC---CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCc
Q 045092          160 -----PIVYMAPEYAKHG---YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFG  231 (307)
Q Consensus       160 -----t~~y~aPE~~~~~---~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~  231 (307)
                           ++.|+|||++.++   .++.++|||||||+++||++|+.||....     .....+..... +  ..........
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~-~--~~~~~~~~~~  236 (288)
T cd06616         165 TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-----SVFDQLTQVVK-G--DPPILSNSEE  236 (288)
T ss_pred             ccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-----hHHHHHhhhcC-C--CCCcCCCcCC
Confidence                 5679999998866   68999999999999999999999985322     11111111110 0  0111111112


Q ss_pred             hhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          232 FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       232 ~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ..++..+.+++..|+ +.+|++||++.+|+..
T Consensus       237 ~~~~~~l~~li~~~l-~~~p~~Rpt~~~i~~~  267 (288)
T cd06616         237 REFSPSFVNFINLCL-IKDESKRPKYKELLEH  267 (288)
T ss_pred             CccCHHHHHHHHHHc-cCChhhCcCHHHHhcC
Confidence            235668999999999 9999999999999763

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.86  E-value=1.3e-21  Score=178.17  Aligned_cols=158  Identities=17%  Similarity=0.205  Sum_probs=116.8

Q ss_pred             cccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHHHH---hhCCCCCccceeeeeecCCCC---
Q 045092           90 FASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIGMI---SALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      |...+.||+|+||.||++.. .+++.||||.++...   ....+.+.+|+.++   .+++|+||+++++++......   
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            56678999999999999995 478999999986432   22334566776655   566899999999987654110   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~  160 (324)
T cd05589          81 MEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTST  160 (324)
T ss_pred             EcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCcccc
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 ---PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 ---t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                         ++.|+|||.+.+..++.++|||||||++|||++|+.||......      +.... +..+       .+..+..++.
T Consensus       161 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~------~~~~~-i~~~-------~~~~p~~~~~  226 (324)
T cd05589         161 FCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE------EVFDS-IVND-------EVRYPRFLSR  226 (324)
T ss_pred             cccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH------HHHHH-HHhC-------CCCCCCCCCH
Confidence               67899999999999999999999999999999999999643211      11111 1111       1223344566


Q ss_pred             HHHHHhccccCCCCCCCCC-----CHHHHHH
Q 045092          237 RTSDGNDQCSSSVTPTNRP-----LMSFVVS  262 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RP-----s~~~vl~  262 (307)
                      .+.+++.+|+ +.||.+||     ++.++++
T Consensus       227 ~~~~li~~~L-~~dP~~R~~~~~~~~~~l~~  256 (324)
T cd05589         227 EAISIMRRLL-RRNPERRLGSGEKDAEDVKK  256 (324)
T ss_pred             HHHHHHHHHh-hcCHhHcCCCCCCCHHHHhh
Confidence            8889999999 99999999     4666654

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.86  E-value=7.4e-22  Score=180.10  Aligned_cols=155  Identities=18%  Similarity=0.167  Sum_probs=119.4

Q ss_pred             CcccCCCCeeEEEEEE-cCCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----------
Q 045092           94 NEISERGFGPVYRGLL-ADGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----------  158 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----------  158 (307)
                      +.||+|+||.||++.. .+++.||||++...   .......+.+|+.++..++|+||+++++++.....           
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            4689999999999994 47899999998643   22344678899999999999999999887755411           


Q ss_pred             ----------------------------------------------------------------------------CCcc
Q 045092          159 ----------------------------------------------------------------------------QPIV  162 (307)
Q Consensus       159 ----------------------------------------------------------------------------~t~~  162 (307)
                                                                                                  +|+.
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~  160 (328)
T cd05593          81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPE  160 (328)
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCcC
Confidence                                                                                        0678


Q ss_pred             ccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHh
Q 045092          163 YMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGN  242 (307)
Q Consensus       163 y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~  242 (307)
                      |+|||++.++.++.++|||||||++|||++|+.||......      ..... +       ......++..++..+.+++
T Consensus       161 y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~------~~~~~-~-------~~~~~~~p~~~~~~~~~li  226 (328)
T cd05593         161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------KLFEL-I-------LMEDIKFPRTLSADAKSLL  226 (328)
T ss_pred             ccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH------HHHHH-h-------ccCCccCCCCCCHHHHHHH
Confidence            99999999889999999999999999999999999533211      11111 1       1112234445667889999


Q ss_pred             ccccCCCCCCCCC-----CHHHHHHH
Q 045092          243 DQCSSSVTPTNRP-----LMSFVVSM  263 (307)
Q Consensus       243 ~~C~~~~dP~~RP-----s~~~vl~~  263 (307)
                      ..|+ +.||.+||     ++.++++.
T Consensus       227 ~~~L-~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         227 SGLL-IKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             HHHc-CCCHHHcCCCCCCCHHHHhcC
Confidence            9999 99999997     88888754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.86  E-value=2.6e-21  Score=169.35  Aligned_cols=161  Identities=19%  Similarity=0.308  Sum_probs=122.7

Q ss_pred             CcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           89 NFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      +|...+.||+|+||.||+|... ++..||+|.+....  ....+.+.+|++++++++|+||+++++.+......      
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            4777899999999999999954 68899999986431  23345788999999999999999999876543110      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~  160 (257)
T cd08225          81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAY  160 (257)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCccccc
Confidence                                                                                            


Q ss_pred             ----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhH
Q 045092          160 ----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFY  235 (307)
Q Consensus       160 ----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  235 (307)
                          ++.|+|||+..++.++.++||||||++++||++|+.|+....      ..+.......      .. .+......+
T Consensus       161 ~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~------~~-~~~~~~~~~  227 (257)
T cd08225         161 TCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN------LHQLVLKICQ------GY-FAPISPNFS  227 (257)
T ss_pred             ccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHhc------cc-CCCCCCCCC
Confidence                456999999988889999999999999999999999985322      1222222111      11 112223455


Q ss_pred             HHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          236 RRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       236 ~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ..+.+++.+|+ ..+|++||++.++++.
T Consensus       228 ~~~~~~i~~~l-~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         228 RDLRSLISQLF-KVSPRDRPSITSILKR  254 (257)
T ss_pred             HHHHHHHHHHh-ccChhhCcCHHHHhhC
Confidence            68999999999 9999999999999763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.86  E-value=1.1e-21  Score=175.00  Aligned_cols=170  Identities=17%  Similarity=0.243  Sum_probs=116.9

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCCh--hcHHHHHHHHHHHhhC---CCCCccceeeeeecCCC----
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSK--QGNREIVNEIGMISAL---QHPNLVKLYRLCTETLK----  158 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~g~~~~~~~----  158 (307)
                      +|...+.||+|+||.||+|.. .+++.||+|.++....  .....+.+|+.++.++   +|+||+++++++.....    
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            477789999999999999995 4789999999864322  2234566788777765   69999999987653200    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        81 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~  160 (288)
T cd07863          81 KVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSC  160 (288)
T ss_pred             eEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccccC
Confidence                                                                                            


Q ss_pred             --------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhh--hhhc-----
Q 045092          159 --------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRA--RKLN-----  223 (307)
Q Consensus       159 --------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~--~~~~-----  223 (307)
                              .|..|+|||++.++.++.++|||||||+++||++|++||.......  .+.. +.......  ....     
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~  237 (288)
T cd07863         161 QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD--QLGK-IFDLIGLPPEDDWPRDVTL  237 (288)
T ss_pred             cccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH--HHHH-HHHHhCCCChhhCcccccc
Confidence                    0567999999998899999999999999999999999985432211  1111 11100000  0000     


Q ss_pred             --ccccC-------CCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          224 --GASCS-------KFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       224 --~~~~~-------~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                        ....+       .+...++..+.+++.+|+ +.||++||++.+++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L-~~dP~~R~t~~~~l~  284 (288)
T cd07863         238 PRGAFSPRGPRPVQSVVPEIEESGAQLLLEML-TFNPHKRISAFRALQ  284 (288)
T ss_pred             cccccCCCCCCchHHhCcCcCHHHHHHHHHHh-ccCcccCCCHHHHhc
Confidence              00000       011123447789999999 999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.86  E-value=3.2e-21  Score=168.71  Aligned_cols=161  Identities=22%  Similarity=0.306  Sum_probs=122.3

Q ss_pred             CcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC-----hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           89 NFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS-----KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      +|...+.||+|+||.||+|... ++..|++|.+....     ....+.+.+|++++..++|+||+++++++......   
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            3667789999999999999965 78999999886432     22456799999999999999999999987654110   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~  160 (258)
T cd06632          81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKS  160 (258)
T ss_pred             EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccccccc
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccCC-CCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhH
Q 045092          160 ---PIVYMAPEYAKHGY-LTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFY  235 (307)
Q Consensus       160 ---t~~y~aPE~~~~~~-~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  235 (307)
                         +..|++||++.... ++.++|+||||+++++|++|+.||.....      .........      ....+.++..++
T Consensus       161 ~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~------~~~~~~~~~------~~~~~~~~~~~~  228 (258)
T cd06632         161 FKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG------VAAVFKIGR------SKELPPIPDHLS  228 (258)
T ss_pred             cCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH------HHHHHHHHh------cccCCCcCCCcC
Confidence               55699999988766 89999999999999999999999853321      111111110      011122334456


Q ss_pred             HHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          236 RRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       236 ~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ..+.+++.+|+ +.+|.+||++.+++.
T Consensus       229 ~~~~~li~~~l-~~~p~~Rp~~~~~l~  254 (258)
T cd06632         229 DEAKDFILKCL-QRDPSLRPTAAELLE  254 (258)
T ss_pred             HHHHHHHHHHh-hcCcccCcCHHHHhc
Confidence            68889999999 999999999999875

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.86  E-value=3.9e-21  Score=170.08  Aligned_cols=160  Identities=25%  Similarity=0.362  Sum_probs=119.0

Q ss_pred             CcccCCCCeeEEEEEEc-CCC--EEEEEEccCC-ChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC----------
Q 045092           94 NEISERGFGPVYRGLLA-DGK--VIEVKQLSSK-SKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK----------  158 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~~-~~~--~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~----------  158 (307)
                      +.||+|+||.||+|... ++.  .+|+|.++.. .......+.+|++++.++ +|+||+++++++.....          
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            46899999999999964 443  4788988643 234456789999999999 89999999876543210          


Q ss_pred             ---------------------------C----------------------------------------------------
Q 045092          159 ---------------------------Q----------------------------------------------------  159 (307)
Q Consensus       159 ---------------------------~----------------------------------------------------  159 (307)
                                                 .                                                    
T Consensus        81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~  160 (270)
T cd05047          81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR  160 (270)
T ss_pred             CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCcc
Confidence                                       0                                                    


Q ss_pred             -------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhccc
Q 045092          160 -------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGA  225 (307)
Q Consensus       160 -------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  225 (307)
                                   +..|+|||++....++.++|||||||+++||++ |+.||......   .+.    ..+      ...
T Consensus       161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~---~~~----~~~------~~~  227 (270)
T cd05047         161 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA---ELY----EKL------PQG  227 (270)
T ss_pred             ccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH---HHH----HHH------hCC
Confidence                         345999999988889999999999999999997 99998532211   111    111      111


Q ss_pred             ccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          226 SCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       226 ~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      .....+...+..+.+++.+|+ ..+|.+||++.+++..|+.+
T Consensus       228 ~~~~~~~~~~~~~~~li~~~l-~~~p~~Rps~~~il~~l~~~  268 (270)
T cd05047         228 YRLEKPLNCDDEVYDLMRQCW-REKPYERPSFAQILVSLNRM  268 (270)
T ss_pred             CCCCCCCcCCHHHHHHHHHHc-ccChhhCCCHHHHHHHHHHh
Confidence            112223345568899999999 99999999999999998764

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.86  E-value=2.1e-21  Score=175.83  Aligned_cols=168  Identities=23%  Similarity=0.343  Sum_probs=125.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc--------CCCEEEEEEccCC-ChhcHHHHHHHHHHHhhC-CCCCccceeeeeecC
Q 045092           87 TNNFASENEISERGFGPVYRGLLA--------DGKVIEVKQLSSK-SKQGNREIVNEIGMISAL-QHPNLVKLYRLCTET  156 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~--------~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~  156 (307)
                      .++|...+.||+|+||.||++...        ....+|+|.++.. .......+.+|+.++.++ +|+||++++++|...
T Consensus        11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~   90 (314)
T cd05099          11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE   90 (314)
T ss_pred             HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence            456788899999999999999731        2457999998754 233456789999999999 699999999876532


Q ss_pred             CC------------------------------------C-----------------------------------------
Q 045092          157 LK------------------------------------Q-----------------------------------------  159 (307)
Q Consensus       157 ~~------------------------------------~-----------------------------------------  159 (307)
                      ..                                    .                                         
T Consensus        91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~  170 (314)
T cd05099          91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTED  170 (314)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCC
Confidence            10                                    0                                         


Q ss_pred             ----------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHH
Q 045092          160 ----------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLD  210 (307)
Q Consensus       160 ----------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~  210 (307)
                                                  +..|+|||.+.++.++.++|||||||++|||++ |..||......      +
T Consensus       171 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~------~  244 (314)
T cd05099         171 NVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE------E  244 (314)
T ss_pred             CcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH------H
Confidence                                        246999999998899999999999999999999 88888532211      1


Q ss_pred             HHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          211 WLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                       +...+..+      .....+..++.++.+++.+|+ ..+|++||++.++++.|....
T Consensus       245 -~~~~~~~~------~~~~~~~~~~~~l~~li~~cl-~~~p~~Rps~~~ll~~l~~~~  294 (314)
T cd05099         245 -LFKLLREG------HRMDKPSNCTHELYMLMRECW-HAVPTQRPTFKQLVEALDKVL  294 (314)
T ss_pred             -HHHHHHcC------CCCCCCCCCCHHHHHHHHHHc-CCCcccCcCHHHHHHHHHHHH
Confidence             11111111      112223445668889999999 999999999999999887654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.86  E-value=2.6e-21  Score=177.48  Aligned_cols=181  Identities=16%  Similarity=0.207  Sum_probs=124.3

Q ss_pred             cHHHHHHHh----cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceee
Q 045092           79 HLRQIKAAT----NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYR  151 (307)
Q Consensus        79 ~~~el~~~t----~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g  151 (307)
                      +..|+..++    ++|...+.||+|+||.||+|.. .+++.||||.+....  ......+.+|+.++.+++|+||+++++
T Consensus         2 ~~~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~   81 (342)
T cd07879           2 YREEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLD   81 (342)
T ss_pred             chhhhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhh
Confidence            344554443    7899999999999999999994 478999999986431  223456889999999999999999998


Q ss_pred             eeecCCC------------------------C------------------------------------------------
Q 045092          152 LCTETLK------------------------Q------------------------------------------------  159 (307)
Q Consensus       152 ~~~~~~~------------------------~------------------------------------------------  159 (307)
                      ++.....                        .                                                
T Consensus        82 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~df  161 (342)
T cd07879          82 VFTSAVSGDEFQDFYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDF  161 (342)
T ss_pred             eecccccCCCCceEEEEecccccCHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeC
Confidence            7643210                        0                                                


Q ss_pred             ---------------Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHH---------
Q 045092          160 ---------------PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGS---------  214 (307)
Q Consensus       160 ---------------t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~---------  214 (307)
                                     +..|+|||.+.+ ..++.++|||||||+++||++|+.||.......   .......         
T Consensus       162 g~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~  238 (342)
T cd07879         162 GLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD---QLTQILKVTGVPGPEF  238 (342)
T ss_pred             CCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHhcCCCCHHH
Confidence                           456999999876 468899999999999999999999996432111   0000000         


Q ss_pred             --HHHh---hhh---hcccccCCCc---hhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          215 --YLKR---ARK---LNGASCSKFG---FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       215 --~~~~---~~~---~~~~~~~~l~---~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                        .+..   ...   ........+.   ...+..+.+++..|+ +.||.+||++.+++..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l-~~dP~~R~~~~e~l~h  297 (342)
T cd07879         239 VQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKML-ELDVDKRLTATEALEH  297 (342)
T ss_pred             HHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHc-CCChhhCcCHHHHhcC
Confidence              0000   000   0000000110   123347889999999 9999999999999853

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.86  E-value=1.6e-21  Score=177.52  Aligned_cols=154  Identities=18%  Similarity=0.229  Sum_probs=117.1

Q ss_pred             CcccCCCCeeEEEEEE----cCCCEEEEEEccCCC----hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           94 NEISERGFGPVYRGLL----ADGKVIEVKQLSSKS----KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~----~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      +.||+|+||.||++..    .+++.||||.++...    ......+.+|+.++.+++|+||+++++++......      
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            6799999999999984    357899999986431    22335678999999999999999999887654110      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  161 (323)
T cd05584          82 LSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFC  161 (323)
T ss_pred             CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcccccC
Confidence                                                                                            


Q ss_pred             -CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHH
Q 045092          160 -PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRT  238 (307)
Q Consensus       160 -t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  238 (307)
                       |+.|+|||++.+..++.++|||||||++|||++|+.||.....      ....... ..+       ...++...+..+
T Consensus       162 gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~------~~~~~~~-~~~-------~~~~~~~~~~~~  227 (323)
T cd05584         162 GTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR------KKTIDKI-LKG-------KLNLPPYLTPEA  227 (323)
T ss_pred             CCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH------HHHHHHH-HcC-------CCCCCCCCCHHH
Confidence             6789999999988899999999999999999999999964321      1111111 111       122334456688


Q ss_pred             HHHhccccCCCCCCCCC-----CHHHHHH
Q 045092          239 SDGNDQCSSSVTPTNRP-----LMSFVVS  262 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RP-----s~~~vl~  262 (307)
                      .+++..|+ +.+|++||     ++.+++.
T Consensus       228 ~~li~~~l-~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         228 RDLLKKLL-KRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             HHHHHHHc-ccCHhHcCCCCCCCHHHHhc
Confidence            99999999 99999999     7888765

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.86  E-value=3.9e-21  Score=169.44  Aligned_cols=161  Identities=16%  Similarity=0.197  Sum_probs=121.0

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC-----hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS-----KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      ++|...+.||+|+||.||+|.. .++..||||.+....     ....+.+.+|+.++.+++|+||+++++++.+....  
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            5788899999999999999995 468999999875321     22345788999999999999999999977543100  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~  161 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICL  161 (265)
T ss_pred             EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccc
Confidence                                                                                            


Q ss_pred             ----------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC
Q 045092          160 ----------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK  229 (307)
Q Consensus       160 ----------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  229 (307)
                                +..|+|||++.+..++.++|||||||++|||++|+.||.....     ... ....      ......+.
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----~~~-~~~~------~~~~~~~~  229 (265)
T cd06652         162 SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA-----MAA-IFKI------ATQPTNPV  229 (265)
T ss_pred             cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch-----HHH-HHHH------hcCCCCCC
Confidence                      4469999999888899999999999999999999999853211     111 1110      11222333


Q ss_pred             CchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          230 FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       230 l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ++......+.+++.+|+ . +|.+||++++|++
T Consensus       230 ~~~~~~~~~~~~i~~~l-~-~p~~Rp~~~~il~  260 (265)
T cd06652         230 LPPHVSDHCRDFLKRIF-V-EAKLRPSADELLR  260 (265)
T ss_pred             CchhhCHHHHHHHHHHh-c-ChhhCCCHHHHhc
Confidence            44455567888888888 5 8999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.86  E-value=4.4e-21  Score=168.79  Aligned_cols=167  Identities=19%  Similarity=0.260  Sum_probs=125.8

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      ++|+..+.||+|+||.||++... +++.||+|.+.... ......+.+|++++++++|+||+++++.+......      
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY   80 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence            46777889999999999999965 68999999987553 34456799999999999999999998876543100      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~  160 (265)
T cd06605          81 MDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFV  160 (265)
T ss_pred             cCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhccc
Confidence                                                                                            


Q ss_pred             -CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchh-hHHH
Q 045092          160 -PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFK-FYRR  237 (307)
Q Consensus       160 -t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~  237 (307)
                       +..|+|||++.+..++.++||||||+++++|++|+.|+....... ....+.+...       .....+.++.. ++..
T Consensus       161 ~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~~~~~~  232 (265)
T cd06605         161 GTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPP-DGIFELLQYI-------VNEPPPRLPSGKFSPD  232 (265)
T ss_pred             CChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccc-ccHHHHHHHH-------hcCCCCCCChhhcCHH
Confidence             457999999998899999999999999999999999996432211 1122222111       11122233333 5668


Q ss_pred             HHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          238 TSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       238 ~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      +.+++..|+ ..+|.+||++.+++..
T Consensus       233 ~~~li~~~l-~~~p~~Rpt~~~ll~~  257 (265)
T cd06605         233 FQDFVNLCL-IKDPRERPSYKELLEH  257 (265)
T ss_pred             HHHHHHHHc-CCCchhCcCHHHHhhC
Confidence            899999999 9999999999998753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.86  E-value=2.4e-21  Score=172.74  Aligned_cols=164  Identities=21%  Similarity=0.315  Sum_probs=122.9

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      ++|+..+.||+|+||.||++... ++..||+|.+... .......+.+|+.++.+++|+||+++++++......      
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY   80 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence            36778899999999999999964 7899999988643 233356799999999999999999999866443100      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~  160 (286)
T cd06622          81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKT  160 (286)
T ss_pred             cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCcccc
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccCC------CCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC
Q 045092          160 ---PIVYMAPEYAKHGY------LTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF  230 (307)
Q Consensus       160 ---t~~y~aPE~~~~~~------~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l  230 (307)
                         +..|+|||.+.++.      ++.++|||||||+++||++|+.||.....   ......+..       +.....+.+
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~---~~~~~~~~~-------~~~~~~~~~  230 (286)
T cd06622         161 NIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETY---ANIFAQLSA-------IVDGDPPTL  230 (286)
T ss_pred             CCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcch---hhHHHHHHH-------HhhcCCCCC
Confidence               45799999886543      57899999999999999999999953221   111111111       112223344


Q ss_pred             chhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          231 GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       231 ~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      +..++..+.+++..|+ +.+|.+||++.+++.
T Consensus       231 ~~~~~~~~~~li~~~l-~~~p~~Rp~~~~l~~  261 (286)
T cd06622         231 PSGYSDDAQDFVAKCL-NKIPNRRPTYAQLLE  261 (286)
T ss_pred             CcccCHHHHHHHHHHc-ccCcccCCCHHHHhc
Confidence            4556778999999999 999999999999876

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.86  E-value=1.9e-21  Score=178.45  Aligned_cols=169  Identities=23%  Similarity=0.291  Sum_probs=125.1

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE------cCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC
Q 045092           87 TNNFASENEISERGFGPVYRGLL------ADGKVIEVKQLSSKS-KQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~  158 (307)
                      .++|...+.||+|+||.||+|..      .+++.||||.++... ......+.+|+.++.++ +|+||++++++|.....
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   85 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence            46788899999999999999972      256789999997543 23345788999999999 78999999876532100


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (343)
T cd05103          86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE  165 (343)
T ss_pred             ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence                                                                                            


Q ss_pred             ----------C-------------------------------------------------------------------Cc
Q 045092          159 ----------Q-------------------------------------------------------------------PI  161 (307)
Q Consensus       159 ----------~-------------------------------------------------------------------t~  161 (307)
                                .                                                                   +.
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~  245 (343)
T cd05103         166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPL  245 (343)
T ss_pred             hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCc
Confidence                      0                                                                   24


Q ss_pred             cccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHH
Q 045092          162 VYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSD  240 (307)
Q Consensus       162 ~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  240 (307)
                      .|+|||.+.++.++.++||||||++++||++ |..|+.......  .    ....+..+.      ....+...+..+.+
T Consensus       246 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~----~~~~~~~~~------~~~~~~~~~~~~~~  313 (343)
T cd05103         246 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--E----FCRRLKEGT------RMRAPDYTTPEMYQ  313 (343)
T ss_pred             ceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH--H----HHHHHhccC------CCCCCCCCCHHHHH
Confidence            5999999988899999999999999999997 899985432111  1    111111111      11222234457899


Q ss_pred             HhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          241 GNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       241 l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      ++..|| +.+|++||++.+|++.|+...
T Consensus       314 ~~~~cl-~~~p~~Rps~~eil~~l~~~~  340 (343)
T cd05103         314 TMLDCW-HGEPSQRPTFSELVEHLGNLL  340 (343)
T ss_pred             HHHHHc-cCChhhCcCHHHHHHHHHHHH
Confidence            999999 999999999999999987653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.86  E-value=3.3e-21  Score=171.33  Aligned_cols=169  Identities=21%  Similarity=0.352  Sum_probs=126.8

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCC----EEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGK----VIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~----~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      .+|...+.||+|+||.||+|... ++.    .+|+|.+.... ......+.+|+.++.+++|+||++++++|......  
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v   86 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQLI   86 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEEE
Confidence            45677899999999999999853 333    58999886543 33456799999999999999999999987542000  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        87 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~  166 (279)
T cd05057          87 TQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEY  166 (279)
T ss_pred             EecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcccce
Confidence                                                                                            


Q ss_pred             -------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCc
Q 045092          160 -------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFG  231 (307)
Q Consensus       160 -------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~  231 (307)
                             +..|++||.+..+.++.++||||||++++|+++ |+.||......   .+    ...+..+      .....+
T Consensus       167 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~----~~~~~~~------~~~~~~  233 (279)
T cd05057         167 HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV---EI----PDLLEKG------ERLPQP  233 (279)
T ss_pred             ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH---HH----HHHHhCC------CCCCCC
Confidence                   246999999988899999999999999999999 99998643211   11    1111111      111222


Q ss_pred             hhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccccc
Q 045092          232 FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAEV  270 (307)
Q Consensus       232 ~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~v  270 (307)
                      ..++..+.+++..|| ..+|..||++.++++.|......
T Consensus       234 ~~~~~~~~~~~~~~l-~~~p~~Rp~~~~l~~~l~~~~~~  271 (279)
T cd05057         234 PICTIDVYMVLVKCW-MIDAESRPTFKELINEFSKMARD  271 (279)
T ss_pred             CCCCHHHHHHHHHHc-CCChhhCCCHHHHHHHHHHHHhC
Confidence            334557889999999 99999999999999999876443

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.86  E-value=4.3e-21  Score=169.98  Aligned_cols=165  Identities=26%  Similarity=0.381  Sum_probs=124.6

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc------CCCEEEEEEccCCChh-cHHHHHHHHHHHhhCCCCCccceeeeeecCC---
Q 045092           88 NNFASENEISERGFGPVYRGLLA------DGKVIEVKQLSSKSKQ-GNREIVNEIGMISALQHPNLVKLYRLCTETL---  157 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~---  157 (307)
                      ++|+....||+|+||.||+|...      +...||+|.+...... ....+.+|++++.+++|+||+++++++.+..   
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            57888899999999999999953      2467999988654433 4568999999999999999999999876521   


Q ss_pred             ------------------C---------C---------------------------------------------------
Q 045092          158 ------------------K---------Q---------------------------------------------------  159 (307)
Q Consensus       158 ------------------~---------~---------------------------------------------------  159 (307)
                                        .         .                                                   
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~  164 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLS  164 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccc
Confidence                              0         0                                                   


Q ss_pred             ----------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhh
Q 045092          160 ----------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKL  222 (307)
Q Consensus       160 ----------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  222 (307)
                                      +..|+|||.+.++..+.++||||||+++++|++ |..||......   .+    ......+. .
T Consensus       165 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~---~~----~~~~~~~~-~  236 (275)
T cd05046         165 KDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE---EV----LNRLQAGK-L  236 (275)
T ss_pred             cccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH---HH----HHHHHcCC-c
Confidence                            334999999988888999999999999999999 78888432211   11    11111111 1


Q ss_pred             cccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhc
Q 045092          223 NGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLE  265 (307)
Q Consensus       223 ~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~  265 (307)
                          .......++..+.+++.+|+ +.+|.+||++.+++..|.
T Consensus       237 ----~~~~~~~~~~~l~~~i~~~l-~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         237 ----ELPVPEGCPSRLYKLMTRCW-AVNPKDRPSFSELVSALG  274 (275)
T ss_pred             ----CCCCCCCCCHHHHHHHHHHc-CCCcccCCCHHHHHHHhc
Confidence                11123346678999999999 999999999999999886

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.86  E-value=3.8e-21  Score=171.07  Aligned_cols=171  Identities=18%  Similarity=0.251  Sum_probs=119.4

Q ss_pred             CcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           89 NFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      +|...+.||+|+||.||+|... ++..||||.+....  ....+.+.+|+.++.+++|+||+++++++.++...      
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            4777899999999999999954 78999999986432  22346788999999999999999999987654110      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  160 (285)
T cd07861          81 LSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTH  160 (285)
T ss_pred             CCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccccC
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHH----------HH---HHhhh-h
Q 045092          160 ---PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLG----------SY---LKRAR-K  221 (307)
Q Consensus       160 ---t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~----------~~---~~~~~-~  221 (307)
                         ++.|+|||.+.+. .++.++|||||||+++||++|+.||.......  .+.....          ..   ..... .
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (285)
T cd07861         161 EVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID--QLFRIFRILGTPTEDVWPGVTSLPDYKNT  238 (285)
T ss_pred             CcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHHHHhCCCChhhhhcchhhHHHHhh
Confidence               4579999988654 47899999999999999999999996432111  0000000          00   00000 0


Q ss_pred             hcccccCC---CchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          222 LNGASCSK---FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       222 ~~~~~~~~---l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ........   ....++.++.+++.+|+ +.||.+||++.+|+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l-~~dP~~Rpt~~~ll~  281 (285)
T cd07861         239 FPKWKKGSLRSAVKNLDEDGLDLLEKML-IYDPAKRISAKKALN  281 (285)
T ss_pred             ccccCcchhHHhcCCCCHHHHHHHHHHh-cCChhhCCCHHHHhc
Confidence            00000000   01124557889999999 999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.86  E-value=3.7e-21  Score=174.49  Aligned_cols=164  Identities=20%  Similarity=0.293  Sum_probs=121.5

Q ss_pred             cccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           90 FASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      |...+.||+|+||.||++.. .++..||+|.+....   ......+.+|++++++++|+|++++++++.+....      
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  106 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY  106 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence            66678999999999999995 478899999986432   22345788999999999999999999987654110      


Q ss_pred             -----------------------------------------------------------------------------Ccc
Q 045092          160 -----------------------------------------------------------------------------PIV  162 (307)
Q Consensus       160 -----------------------------------------------------------------------------t~~  162 (307)
                                                                                                   +..
T Consensus       107 ~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~  186 (317)
T cd06635         107 CLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTPY  186 (317)
T ss_pred             CCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCcccccCCcc
Confidence                                                                                         567


Q ss_pred             ccchhhhc---cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHH
Q 045092          163 YMAPEYAK---HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTS  239 (307)
Q Consensus       163 y~aPE~~~---~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  239 (307)
                      |+|||++.   .+.++.++|||||||+++||++|+.|+......      .........      ...+......+..+.
T Consensus       187 y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~------~~~~~~~~~------~~~~~~~~~~~~~l~  254 (317)
T cd06635         187 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------SALYHIAQN------ESPTLQSNEWSDYFR  254 (317)
T ss_pred             ccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH------HHHHHHHhc------cCCCCCCccccHHHH
Confidence            99999874   467899999999999999999999998532111      111111111      111111223455789


Q ss_pred             HHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          240 DGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       240 ~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      +++.+|+ +.+|.+||++.++++.+-.
T Consensus       255 ~li~~~l-~~~p~~Rpt~~~il~~~~~  280 (317)
T cd06635         255 NFVDSCL-QKIPQDRPTSEELLKHMFV  280 (317)
T ss_pred             HHHHHHc-cCCcccCcCHHHHHhChhh
Confidence            9999999 9999999999999876443

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.86  E-value=4.8e-21  Score=173.42  Aligned_cols=106  Identities=21%  Similarity=0.367  Sum_probs=85.5

Q ss_pred             CCcccCCCCeeEEEEEEc---CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----------
Q 045092           93 ENEISERGFGPVYRGLLA---DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----------  158 (307)
Q Consensus        93 ~~~lG~G~~g~Vy~~~~~---~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----------  158 (307)
                      +.+||+|+||.||+|...   +++.||+|.+....  ....+.+|+.++++++|+||+++++++.....           
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE   83 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence            468999999999999853   56789999986432  23457889999999999999999876532100           


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~  163 (317)
T cd07868          84 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN  163 (317)
T ss_pred             CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccC
Confidence                                                                                            


Q ss_pred             -------------CCccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCC
Q 045092          159 -------------QPIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICR  200 (307)
Q Consensus       159 -------------~t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~  200 (307)
                                   .|+.|+|||++.+ ..++.++||||+||+++||++|+.||...
T Consensus       164 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~  219 (317)
T cd07868         164 SPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             CCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence                         0566999999876 45899999999999999999999999643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.86  E-value=3.8e-21  Score=168.47  Aligned_cols=162  Identities=18%  Similarity=0.243  Sum_probs=124.2

Q ss_pred             CcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           89 NFASENEISERGFGPVYRGL-LADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      +|+..+.||+|+||.||.++ ..++..+++|.+...  .....+.+.+|++++++++|+||+++++++.+....      
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            47788999999999999988 457889999987643  334456789999999999999999999887654110      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~  160 (256)
T cd08221          81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAET  160 (256)
T ss_pred             cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccccccc
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 ---PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 ---t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                         ++.|+|||++.+..++.++||||||++++||++|+.||.....      .+...... .+.      .+.....++.
T Consensus       161 ~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~------~~~~~~~~-~~~------~~~~~~~~~~  227 (256)
T cd08221         161 VVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP------LNLVVKIV-QGN------YTPVVSVYSS  227 (256)
T ss_pred             cCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHH-cCC------CCCCccccCH
Confidence               5779999999888889999999999999999999999853221      11111111 111      1112244566


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHHHh
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVSML  264 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~~L  264 (307)
                      .+.+++..|+ ..+|.+||++.++++.+
T Consensus       228 ~~~~~i~~~l-~~~p~~R~s~~~ll~~~  254 (256)
T cd08221         228 ELISLVHSLL-QQDPEKRPTADEVLDQP  254 (256)
T ss_pred             HHHHHHHHHc-ccCcccCCCHHHHhhCc
Confidence            8899999999 99999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.86  E-value=6.8e-21  Score=167.18  Aligned_cols=165  Identities=16%  Similarity=0.293  Sum_probs=128.2

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh-hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK-QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      ++|+..+.||+|++|.||++... +++.||||++..... .....+.+|+..+.+++|+||+++++++......      
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            47888899999999999999965 689999999876543 3456899999999999999999999887653100      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~  160 (264)
T cd06623          81 MDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTF  160 (264)
T ss_pred             cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcccce
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchh-hHH
Q 045092          160 --PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFK-FYR  236 (307)
Q Consensus       160 --t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~-~~~  236 (307)
                        +..|+|||.+.++.++.++||||||+++|+|++|+.|+.......   ..+....       +.....+.+... ++.
T Consensus       161 ~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~---~~~~~~~-------~~~~~~~~~~~~~~~~  230 (264)
T cd06623         161 VGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS---FFELMQA-------ICDGPPPSLPAEEFSP  230 (264)
T ss_pred             eecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccC---HHHHHHH-------HhcCCCCCCCcccCCH
Confidence              467999999999999999999999999999999999996443211   1111111       112222333333 667


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .+.+++..|+ ..+|++||++.++++.
T Consensus       231 ~l~~li~~~l-~~~p~~R~~~~~ll~~  256 (264)
T cd06623         231 EFRDFISACL-QKDPKKRPSAAELLQH  256 (264)
T ss_pred             HHHHHHHHHc-cCChhhCCCHHHHHhC
Confidence            8999999999 9999999999999863

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.86  E-value=1.5e-21  Score=175.50  Aligned_cols=171  Identities=13%  Similarity=0.231  Sum_probs=121.0

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      ++|...+.||+|+||.||+|... +++.||+|.+.... ......+.+|+.++.+++|+||+++++++......      
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            56888899999999999999854 68899999986442 22345678899999999999999999987643110      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        86 ~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~  165 (301)
T cd07873          86 LDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEV  165 (301)
T ss_pred             cccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccccc
Confidence                                                                                            


Q ss_pred             -Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHH-----------HHhhhhhcccc
Q 045092          160 -PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSY-----------LKRARKLNGAS  226 (307)
Q Consensus       160 -t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~-----------~~~~~~~~~~~  226 (307)
                       ++.|+|||.+.+ ..++.++|||||||+++||++|+.||......+   ....+...           +..........
T Consensus       166 ~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (301)
T cd07873         166 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE---QLHFIFRILGTPTEETWPGILSNEEFKSYN  242 (301)
T ss_pred             eeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHcCCCChhhchhhhccccccccc
Confidence             567999998865 457889999999999999999999996433211   11111000           00000000000


Q ss_pred             cCC--------CchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          227 CSK--------FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       227 ~~~--------l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .+.        .....+..+.+++.+|+ +.||.+|||+.++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~li~~ml-~~dp~~R~t~~eil~  285 (301)
T cd07873         243 YPKYRADCLHNHAPRLDSDGAELLSKLL-QFEGRKRISAEEAMK  285 (301)
T ss_pred             cCccccccHHhhcCCCCHHHHHHHHHHh-cCCcccCcCHHHHhc
Confidence            111        11123447889999999 999999999999976

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.86  E-value=5.5e-21  Score=168.07  Aligned_cols=165  Identities=19%  Similarity=0.265  Sum_probs=122.8

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      ++|+..+.||.|+||.||+|.. .++..+|+|.+.... ......+.+|+.+++.++|+||+++++.+......      
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            4788899999999999999994 468899999986432 33567899999999999999999999876543100      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~  160 (267)
T cd06610          81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTR  160 (267)
T ss_pred             cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccc
Confidence                                                                                            


Q ss_pred             --------CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC
Q 045092          160 --------PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF  230 (307)
Q Consensus       160 --------t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l  230 (307)
                              +..|+|||++..+ .++.++|||||||+++||++|+.||.......  .+.+    .....   ........
T Consensus       161 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~--~~~~----~~~~~---~~~~~~~~  231 (267)
T cd06610         161 KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK--VLML----TLQND---PPSLETGA  231 (267)
T ss_pred             cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh--hHHH----HhcCC---CCCcCCcc
Confidence                    3469999998877 78999999999999999999999996432211  1111    11110   01111111


Q ss_pred             -chhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          231 -GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       231 -~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                       ...++..+.+++..|+ +.||++||++.++++
T Consensus       232 ~~~~~~~~~~~li~~~l-~~~p~~Rp~~~~ll~  263 (267)
T cd06610         232 DYKKYSKSFRKMISLCL-QKDPSKRPTAEELLK  263 (267)
T ss_pred             ccccccHHHHHHHHHHc-CCChhhCcCHHHHhh
Confidence             1244568899999999 999999999999976

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.86  E-value=2.2e-21  Score=181.63  Aligned_cols=94  Identities=22%  Similarity=0.183  Sum_probs=70.2

Q ss_pred             ccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHH
Q 045092          161 IVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTS  239 (307)
Q Consensus       161 ~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  239 (307)
                      ..|+|||.+.++.++.++|||||||+++||++ |+.|+.....      .+.....+..+      ..+..+..++..+.
T Consensus       305 ~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~------~~~~~~~~~~~------~~~~~p~~~~~~l~  372 (401)
T cd05107         305 LKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM------NEQFYNAIKRG------YRMAKPAHASDEIY  372 (401)
T ss_pred             CceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc------hHHHHHHHHcC------CCCCCCCCCCHHHH
Confidence            45999999998889999999999999999998 8889853221      11111111111      11222334566899


Q ss_pred             HHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          240 DGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       240 ~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      +++..|| ..+|..||++.+|++.|+..
T Consensus       373 ~li~~cl-~~~P~~RPs~~ell~~L~~~  399 (401)
T cd05107         373 EIMQKCW-EEKFEIRPDFSQLVHLVGDL  399 (401)
T ss_pred             HHHHHHc-CCChhHCcCHHHHHHHHHHH
Confidence            9999999 99999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.86  E-value=2.4e-21  Score=176.86  Aligned_cols=156  Identities=15%  Similarity=0.143  Sum_probs=115.9

Q ss_pred             CcccCCCCeeEEEEEE-cCCCEEEEEEccCC---ChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCCC---------
Q 045092           94 NEISERGFGPVYRGLL-ADGKVIEVKQLSSK---SKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLKQ---------  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~---------  159 (307)
                      +.||+|+||.||++.. .+++.||+|.++..   .......+.+|+.++.++ +|+||+++++++......         
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            4699999999999995 46889999998753   223345678899998877 899999999987654110         


Q ss_pred             ------------------------------------------------------------------------------Cc
Q 045092          160 ------------------------------------------------------------------------------PI  161 (307)
Q Consensus       160 ------------------------------------------------------------------------------t~  161 (307)
                                                                                                    |+
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~  160 (329)
T cd05618          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP  160 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCCc
Confidence                                                                                          67


Q ss_pred             cccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccC--cccHHHHHHHHHHhhhhhcccccCCCchhhHHHHH
Q 045092          162 VYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKED--KFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTS  239 (307)
Q Consensus       162 ~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  239 (307)
                      .|+|||++.+..++.++|||||||++|||++|+.||.......  ......++...+...       ...++...+..+.
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~-------~~~~p~~~~~~~~  233 (329)
T cd05618         161 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-------QIRIPRSLSVKAA  233 (329)
T ss_pred             cccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcC-------CCCCCCCCCHHHH
Confidence            8999999999999999999999999999999999995322111  111222222222211       1234445566888


Q ss_pred             HHhccccCCCCCCCCCCH
Q 045092          240 DGNDQCSSSVTPTNRPLM  257 (307)
Q Consensus       240 ~l~~~C~~~~dP~~RPs~  257 (307)
                      +++.+|+ +.||.+||++
T Consensus       234 ~ll~~~L-~~dP~~R~~~  250 (329)
T cd05618         234 SVLKSFL-NKDPKERLGC  250 (329)
T ss_pred             HHHHHHh-cCCHHHcCCC
Confidence            9999999 9999999983

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.85  E-value=4e-21  Score=169.90  Aligned_cols=166  Identities=21%  Similarity=0.291  Sum_probs=119.9

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCCh----------hcHHHHHHHHHHHhhCCCCCccceeeeeecCC
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSK----------QGNREIVNEIGMISALQHPNLVKLYRLCTETL  157 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~----------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~  157 (307)
                      +|...+.||+|+||.||+|.. .+++.||+|.+.....          ...+.+.+|+.++.+++|+||+++++++....
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            366778999999999999984 4788999998753211          01246788999999999999999999876541


Q ss_pred             CC------------------------------------------------------------------------------
Q 045092          158 KQ------------------------------------------------------------------------------  159 (307)
Q Consensus       158 ~~------------------------------------------------------------------------------  159 (307)
                      ..                                                                              
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~  161 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDI  161 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccccc
Confidence            10                                                                              


Q ss_pred             -----------CccccchhhhccCC--CCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccc
Q 045092          160 -----------PIVYMAPEYAKHGY--LTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGAS  226 (307)
Q Consensus       160 -----------t~~y~aPE~~~~~~--~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  226 (307)
                                 +..|+|||.+....  ++.++||||||++++|+++|..|+.....     ... ..... ... .....
T Consensus       162 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----~~~-~~~~~-~~~-~~~~~  233 (272)
T cd06629         162 YDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA-----IAA-MFKLG-NKR-SAPPI  233 (272)
T ss_pred             ccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch-----HHH-HHHhh-ccc-cCCcC
Confidence                       45699999987654  78999999999999999999999852211     111 11110 011 11122


Q ss_pred             cCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          227 CSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       227 ~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .......++..+.+++..|+ ..+|.+||++.+|++.
T Consensus       234 ~~~~~~~~~~~~~~li~~~l-~~~p~~Rps~~~il~~  269 (272)
T cd06629         234 PPDVSMNLSPVALDFLNACF-TINPDNRPTARELLQH  269 (272)
T ss_pred             CccccccCCHHHHHHHHHHh-cCChhhCCCHHHHhhC
Confidence            22233345668999999999 9999999999999764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.85  E-value=4.6e-21  Score=170.61  Aligned_cols=171  Identities=20%  Similarity=0.245  Sum_probs=118.4

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      +|+..+.||.|+||.||+|.. .+++.||||.+....  ......+.+|++++++++|+||+++++++.+....      
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            578889999999999999985 478999999886432  22335788999999999999999999886543110      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~  160 (284)
T cd07860          81 LHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE  160 (284)
T ss_pred             cccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccccc
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCC-CCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHH----------HHHH---hh-hhh
Q 045092          160 --PIVYMAPEYAKHGY-LTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLG----------SYLK---RA-RKL  222 (307)
Q Consensus       160 --t~~y~aPE~~~~~~-~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~----------~~~~---~~-~~~  222 (307)
                        +..|+|||++.+.. ++.++||||||++++||+||+.||......  ..+.....          ....   .. ..+
T Consensus       161 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd07860         161 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--DQLFRIFRTLGTPDEVVWPGVTSLPDYKPSF  238 (284)
T ss_pred             cccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHHHhCCCChhhhhhhhHHHHHHhhc
Confidence              45699999887644 688999999999999999999998533211  11111000          0000   00 000


Q ss_pred             cccccCCC---chhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          223 NGASCSKF---GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       223 ~~~~~~~l---~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .......+   ....+..+.+++.+|+ +.||.+||++.++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~li~~~l-~~~P~~Rpt~~~~l~  280 (284)
T cd07860         239 PKWARQDFSKVVPPLDEDGRDLLSQML-HYDPNKRISAKAALA  280 (284)
T ss_pred             ccccccCHHHHcccCCHHHHHHHHHhc-CCCcccCCCHHHHhc
Confidence            00000000   1123447788999999 999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.85  E-value=6.7e-22  Score=182.30  Aligned_cols=159  Identities=19%  Similarity=0.276  Sum_probs=123.6

Q ss_pred             CcccCCcccCCCCeeEEEEEEcCCCEEEEEEccC--CChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCCC------
Q 045092           89 NFASENEISERGFGPVYRGLLADGKVIEVKQLSS--KSKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~--~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~------  159 (307)
                      .|++.+.||.||.+.||++...+.+.+|+|++..  .+.+....|.+|+.+|.+| .|.+||+|++|-..+...      
T Consensus       362 ~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~  441 (677)
T KOG0596|consen  362 EYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMEC  441 (677)
T ss_pred             hhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeec
Confidence            4888899999999999999987788899988753  4566778999999999999 699999999986554110      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       442 Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG~LKLIDFGIA~aI~~DTTsI~kdsQ  521 (677)
T KOG0596|consen  442 GDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKGRLKLIDFGIANAIQPDTTSIVKDSQ  521 (677)
T ss_pred             ccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEeeeEEeeeechhcccCccccceeeccc
Confidence                                                                                            


Q ss_pred             --CccccchhhhccC-----------CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccc
Q 045092          160 --PIVYMAPEYAKHG-----------YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGAS  226 (307)
Q Consensus       160 --t~~y~aPE~~~~~-----------~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  226 (307)
                        |+.||+||.+...           +++.++||||+|||||+|+.|+.||...     .++..          ++..+.
T Consensus       522 vGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~-----~n~~a----------Kl~aI~  586 (677)
T KOG0596|consen  522 VGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI-----INQIA----------KLHAIT  586 (677)
T ss_pred             cCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH-----HHHHH----------HHHhhc
Confidence              9999999987532           2678999999999999999999999421     11111          144455


Q ss_pred             cCCCchhhH-----HHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          227 CSKFGFKFY-----RRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       227 ~~~l~~~~~-----~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      +|...-+++     .++++++..|+ +.||.+||++.++++.
T Consensus       587 ~P~~~Iefp~~~~~~~li~~mK~CL-~rdPkkR~si~eLLqh  627 (677)
T KOG0596|consen  587 DPNHEIEFPDIPENDELIDVMKCCL-ARDPKKRWSIPELLQH  627 (677)
T ss_pred             CCCccccccCCCCchHHHHHHHHHH-hcCcccCCCcHHHhcC
Confidence            553322222     15999999999 9999999999999763

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=4.5e-21  Score=170.01  Aligned_cols=160  Identities=20%  Similarity=0.315  Sum_probs=121.2

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC-ChhcHHHHHHHHHHHhhCC---CCCccceeeeeecCCCC----
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK-SKQGNREIVNEIGMISALQ---HPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~~~----  159 (307)
                      .|+..+.||+|+||.||+|.. .+++.||+|.+... .......+.+|+.++++++   |+|++++++++.+....    
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            477788999999999999995 57899999998654 2334567889999999986   99999999987654110    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        82 e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~  161 (277)
T cd06917          82 EYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTF  161 (277)
T ss_pred             ecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccccc
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCC-CCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCch-hhH
Q 045092          160 --PIVYMAPEYAKHGY-LTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGF-KFY  235 (307)
Q Consensus       160 --t~~y~aPE~~~~~~-~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~-~~~  235 (307)
                        +..|+|||++.++. ++.++|||||||++|+|++|+.||.......      ... .      +.....+.+.. .++
T Consensus       162 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~------~~~-~------~~~~~~~~~~~~~~~  228 (277)
T cd06917         162 VGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR------AMM-L------IPKSKPPRLEDNGYS  228 (277)
T ss_pred             cCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh------hhh-c------cccCCCCCCCcccCC
Confidence              45699999987654 6889999999999999999999996432111      000 0      11112233333 256


Q ss_pred             HHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          236 RRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       236 ~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .++.+++..|+ +.||++||++.+++.
T Consensus       229 ~~~~~~i~~~l-~~~p~~R~~~~~il~  254 (277)
T cd06917         229 KLLREFVAACL-DEEPKERLSAEELLK  254 (277)
T ss_pred             HHHHHHHHHHc-CCCcccCcCHHHHhh
Confidence            68999999999 999999999999975

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.85  E-value=4.1e-21  Score=170.84  Aligned_cols=159  Identities=19%  Similarity=0.167  Sum_probs=115.2

Q ss_pred             ccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------------
Q 045092           96 ISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------------  159 (307)
Q Consensus        96 lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------------  159 (307)
                      ||+|+||.||++.. .+|+.||+|.+....   ......+..|++++.+++|+||+++++++......            
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            79999999999995 478999999986422   12234566799999999999999998877543110            


Q ss_pred             ----------------------------------------------------------------------------Cccc
Q 045092          160 ----------------------------------------------------------------------------PIVY  163 (307)
Q Consensus       160 ----------------------------------------------------------------------------t~~y  163 (307)
                                                                                                  +..|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y  160 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNGY  160 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCCc
Confidence                                                                                        6789


Q ss_pred             cchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhc
Q 045092          164 MAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGND  243 (307)
Q Consensus       164 ~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~  243 (307)
                      +|||++.++.++.++|||||||++|||++|+.||.......  .........      ...... .....++.++.+++.
T Consensus       161 ~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~--~~~~~~~~~------~~~~~~-~~~~~~~~~~~~li~  231 (277)
T cd05607         161 MAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV--AKEELKRRT------LEDEVK-FEHQNFTEESKDICR  231 (277)
T ss_pred             cCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh--hHHHHHHHh------hccccc-cccccCCHHHHHHHH
Confidence            99999999899999999999999999999999985322111  111111111      111111 111235668899999


Q ss_pred             cccCCCCCCCCCCHHHHHHHh
Q 045092          244 QCSSSVTPTNRPLMSFVVSML  264 (307)
Q Consensus       244 ~C~~~~dP~~RPs~~~vl~~L  264 (307)
                      .|+ +.||++||++.++++.+
T Consensus       232 ~~L-~~~P~~R~~~~~~~~~~  251 (277)
T cd05607         232 LFL-AKKPEDRLGSREKNDDP  251 (277)
T ss_pred             HHh-ccCHhhCCCCccchhhh
Confidence            999 99999999997765433

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.85  E-value=7.2e-21  Score=166.41  Aligned_cols=158  Identities=30%  Similarity=0.451  Sum_probs=122.0

Q ss_pred             CcccCCCCeeEEEEEEc-C---CCEEEEEEccCCChhc-HHHHHHHHHHHhhCCCCCccceeeeeecC------------
Q 045092           94 NEISERGFGPVYRGLLA-D---GKVIEVKQLSSKSKQG-NREIVNEIGMISALQHPNLVKLYRLCTET------------  156 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~~-~---~~~vAvK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~g~~~~~------------  156 (307)
                      +.||+|+||.||++... .   +..||+|.+....... .+.+.+|+..+..++|+||+++++++...            
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            46999999999999954 3   7889999987654333 67899999999999999999999876552            


Q ss_pred             --------CC---------C------------------------------------------------------------
Q 045092          157 --------LK---------Q------------------------------------------------------------  159 (307)
Q Consensus       157 --------~~---------~------------------------------------------------------------  159 (307)
                              ..         .                                                            
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~  160 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY  160 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccccc
Confidence                    00         1                                                            


Q ss_pred             ---------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC
Q 045092          160 ---------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK  229 (307)
Q Consensus       160 ---------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  229 (307)
                               +..|+|||.+..+.++.++||||+|++++||++ |..||.....   ..+    ...+.      ......
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~----~~~~~------~~~~~~  227 (262)
T cd00192         161 YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN---EEV----LEYLR------KGYRLP  227 (262)
T ss_pred             cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH---HHH----HHHHH------cCCCCC
Confidence                     557999999998899999999999999999999 6999864321   111    11111      112223


Q ss_pred             CchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhc
Q 045092          230 FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLE  265 (307)
Q Consensus       230 l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~  265 (307)
                      .+..++.++.+++..|+ +.+|.+||++.++++.|+
T Consensus       228 ~~~~~~~~~~~li~~~l-~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         228 KPEYCPDELYELMLSCW-QLDPEDRPTFSELVERLE  262 (262)
T ss_pred             CCccCChHHHHHHHHHc-cCCcccCcCHHHHHHhhC
Confidence            33445678999999999 999999999999998874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>PTZ00284 protein kinase; Provisional

Probab=99.85  E-value=5e-21  Score=182.84  Aligned_cols=180  Identities=16%  Similarity=0.120  Sum_probs=118.5

Q ss_pred             HHHHHHhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCC------Cccceeeee
Q 045092           81 RQIKAATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHP------NLVKLYRLC  153 (307)
Q Consensus        81 ~el~~~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~g~~  153 (307)
                      +++...+++|.+.+.||+|+||.||+|.. .+++.||||+++... ...+.+..|++++..++|.      +++++++++
T Consensus       122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~  200 (467)
T PTZ00284        122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF  200 (467)
T ss_pred             CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence            34555678899999999999999999995 468899999986432 2234556677777666543      477776655


Q ss_pred             ecCC----------------------------------------------------------------------------
Q 045092          154 TETL----------------------------------------------------------------------------  157 (307)
Q Consensus       154 ~~~~----------------------------------------------------------------------------  157 (307)
                      ....                                                                            
T Consensus       201 ~~~~~~~~iv~~~~g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~  280 (467)
T PTZ00284        201 QNETGHMCIVMPKYGPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRAL  280 (467)
T ss_pred             EcCCceEEEEEeccCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccccccccccc
Confidence            3220                                                                            


Q ss_pred             -------------------------CCCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHH
Q 045092          158 -------------------------KQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWL  212 (307)
Q Consensus       158 -------------------------~~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~  212 (307)
                                               .+|+.|+|||++.+..++.++|||||||++|||++|+.||......+...+....
T Consensus       281 ~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~  360 (467)
T PTZ00284        281 PPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKT  360 (467)
T ss_pred             CCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence                                     0156799999999999999999999999999999999999654322111111000


Q ss_pred             ---------H--------HHHHhhhhhcccccCC----------Cch-hhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          213 ---------G--------SYLKRARKLNGASCSK----------FGF-KFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       213 ---------~--------~~~~~~~~~~~~~~~~----------l~~-~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                               .        ..+.....+....++.          +.. .....+.+++..|+ +.||.+||++.|+++
T Consensus       361 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL-~~dP~~R~ta~e~L~  437 (467)
T PTZ00284        361 LGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLL-HYDRQKRLNARQMTT  437 (467)
T ss_pred             cCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhC-CcChhhCCCHHHHhc
Confidence                     0        0000000000000000          000 01235779999999 999999999999986

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.85  E-value=5.2e-21  Score=174.29  Aligned_cols=168  Identities=17%  Similarity=0.234  Sum_probs=114.9

Q ss_pred             cCCcccCC--CCeeEEEEEE-cCCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           92 SENEISER--GFGPVYRGLL-ADGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        92 ~~~~lG~G--~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      ..++||+|  +||+||++.. .+|+.||+|++....  ....+.+.+|+.+++.++||||+++++++......       
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            35789999  7899999984 588999999986542  23345678899999999999999999887654110       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (327)
T cd08227          82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVV  161 (327)
T ss_pred             CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcccccccccccc
Confidence                                                                                            


Q ss_pred             ---------Cccccchhhhcc--CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHH---------hh
Q 045092          160 ---------PIVYMAPEYAKH--GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLK---------RA  219 (307)
Q Consensus       160 ---------t~~y~aPE~~~~--~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~---------~~  219 (307)
                               +..|+|||++.+  ..++.++|||||||+++||++|+.||.......  ...........         ..
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  239 (327)
T cd08227         162 HDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ--MLLEKLNGTVPCLLDTTTIPAE  239 (327)
T ss_pred             ccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhH--HHHHHhcCCccccccccchhhh
Confidence                     234999999876  458999999999999999999999996322111  00000000000         00


Q ss_pred             h------------hhccc-----cc--------CCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          220 R------------KLNGA-----SC--------SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       220 ~------------~~~~~-----~~--------~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .            .+...     ..        ......++..+.+++..|+ +.||++|||+.++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l-~~dP~~Rpt~~ell~  306 (327)
T cd08227         240 ELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCL-QRNPDARPSASTLLN  306 (327)
T ss_pred             hcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHH-hhCchhcCCHHHHhc
Confidence            0            00000     00        0011123447889999999 999999999999975

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.85  E-value=5.7e-21  Score=167.83  Aligned_cols=161  Identities=26%  Similarity=0.386  Sum_probs=121.6

Q ss_pred             CcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh--hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           89 NFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK--QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      +|...+.||+|+||.||+|... +++.||+|.++....  ...+.+.+|+.++++++|+||+++++++......      
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            4677899999999999999954 788999999875533  3567899999999999999999999876543100      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~  160 (264)
T cd06626          81 CSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEV  160 (264)
T ss_pred             CCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccc
Confidence                                                                                            


Q ss_pred             -----CccccchhhhccCC---CCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCc
Q 045092          160 -----PIVYMAPEYAKHGY---LTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFG  231 (307)
Q Consensus       160 -----t~~y~aPE~~~~~~---~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~  231 (307)
                           +..|++||++....   ++.++||||||++++|+++|+.||.......     .....       +.....+.++
T Consensus       161 ~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~-----~~~~~-------~~~~~~~~~~  228 (264)
T cd06626         161 QSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF-----QIMFH-------VGAGHKPPIP  228 (264)
T ss_pred             cCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH-----HHHHH-------HhcCCCCCCC
Confidence                 34799999998766   8899999999999999999999995332111     00000       1111222232


Q ss_pred             hh--hHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          232 FK--FYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       232 ~~--~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ..  .+..+.+++..|+ +.+|.+||++.+++.
T Consensus       229 ~~~~~~~~~~~li~~~l-~~~p~~R~~~~~i~~  260 (264)
T cd06626         229 DSLQLSPEGKDFLDRCL-ESDPKKRPTASELLQ  260 (264)
T ss_pred             cccccCHHHHHHHHHHc-cCCcccCCCHHHHhc
Confidence            22  2567889999999 999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.85  E-value=3.3e-21  Score=175.05  Aligned_cols=154  Identities=15%  Similarity=0.146  Sum_probs=116.9

Q ss_pred             CcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC----------
Q 045092           94 NEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK----------  158 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~----------  158 (307)
                      +.||+|+||.||++... +++.||||.++...   ......+.+|+.++..+ +|+||+++++++.....          
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999954 67899999987432   23345678899999888 79999999997654310          


Q ss_pred             -----------------------------------------------------------------------------CCc
Q 045092          159 -----------------------------------------------------------------------------QPI  161 (307)
Q Consensus       159 -----------------------------------------------------------------------------~t~  161 (307)
                                                                                                   +|+
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~  160 (318)
T cd05570          81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTP  160 (318)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecCc
Confidence                                                                                         067


Q ss_pred             cccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHH
Q 045092          162 VYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDG  241 (307)
Q Consensus       162 ~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l  241 (307)
                      .|+|||++.+..++.++|||||||++|||++|+.||.....      .. +...+...       ...++...+..+.++
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~------~~-~~~~i~~~-------~~~~~~~~~~~~~~l  226 (318)
T cd05570         161 DYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE------DE-LFQSILED-------EVRYPRWLSKEAKSI  226 (318)
T ss_pred             cccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH------HH-HHHHHHcC-------CCCCCCcCCHHHHHH
Confidence            89999999999999999999999999999999999963321      11 11111111       122334456688999


Q ss_pred             hccccCCCCCCCCCCH-----HHHHH
Q 045092          242 NDQCSSSVTPTNRPLM-----SFVVS  262 (307)
Q Consensus       242 ~~~C~~~~dP~~RPs~-----~~vl~  262 (307)
                      +..|+ +.||.+||++     .+++.
T Consensus       227 i~~~l-~~dP~~R~s~~~~~~~~ll~  251 (318)
T cd05570         227 LKSFL-TKNPEKRLGCLPTGEQDIKG  251 (318)
T ss_pred             HHHHc-cCCHHHcCCCCCCCHHHHhc
Confidence            99999 9999999998     77765

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.85  E-value=3.4e-21  Score=172.07  Aligned_cols=162  Identities=20%  Similarity=0.226  Sum_probs=118.9

Q ss_pred             cccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           90 FASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      |...+.||+|+||.||++.. .+++.||+|.+....   ......+.+|++++.+++|+||+++++++......      
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            56678899999999999995 478999999986432   22234678899999999999999998776543100      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~  161 (285)
T cd05632          82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGR  161 (285)
T ss_pred             ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccCC
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHH
Q 045092          160 --PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRR  237 (307)
Q Consensus       160 --t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  237 (307)
                        +..|+|||++.++.++.++|+||||++++||++|+.||.......   ....+......      . .......++..
T Consensus       162 ~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~---~~~~~~~~~~~------~-~~~~~~~~~~~  231 (285)
T cd05632         162 VGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV---KREEVDRRVLE------T-EEVYSAKFSEE  231 (285)
T ss_pred             CCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHhhhc------c-ccccCccCCHH
Confidence              668999999998899999999999999999999999996432111   01111111111      1 11223345567


Q ss_pred             HHHHhccccCCCCCCCCCC-----HHHHHH
Q 045092          238 TSDGNDQCSSSVTPTNRPL-----MSFVVS  262 (307)
Q Consensus       238 ~~~l~~~C~~~~dP~~RPs-----~~~vl~  262 (307)
                      +.+++..|+ +.||++||+     +.+++.
T Consensus       232 ~~~li~~~l-~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05632         232 AKSICKMLL-TKDPKQRLGCQEEGAGEVKR  260 (285)
T ss_pred             HHHHHHHHc-cCCHhHcCCCcccChHHHHc
Confidence            889999999 999999999     556554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.85  E-value=1.8e-21  Score=173.33  Aligned_cols=174  Identities=18%  Similarity=0.279  Sum_probs=119.6

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh--hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK--QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      ++|+..+.||+|+||.||+|... +++.||+|.+.....  ...+.+.+|++++..++|+||+++++++......     
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            46888899999999999999964 689999998764322  2345788999999999999999999887654110     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~  160 (286)
T cd07846          81 FVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDY  160 (286)
T ss_pred             cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcc
Confidence                                                                                            


Q ss_pred             --Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcc-cHHHH-------HHHHHHhhhhhcccccC
Q 045092          160 --PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKF-YLLDW-------LGSYLKRARKLNGASCS  228 (307)
Q Consensus       160 --t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~-~l~~~-------~~~~~~~~~~~~~~~~~  228 (307)
                        +..|+|||++.+ ..++.++||||||++++||++|++|+......... .+..+       ................+
T Consensus       161 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (286)
T cd07846         161 VATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLP  240 (286)
T ss_pred             cceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccc
Confidence              456999998875 45788999999999999999999988532211000 00000       00000000000000011


Q ss_pred             CC---------chhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          229 KF---------GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       229 ~l---------~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ..         ...++..+.+++..|+ ..+|++||++.++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~li~~~l-~~~P~~Rp~~~~il~  282 (286)
T cd07846         241 EVKEIEPLEKRFPKLSGLVLDLAKQCL-RIDPDDRPSSSQLLH  282 (286)
T ss_pred             cccCcchHHHhCCCcCHHHHHHHHHHh-cCCcccchhHHHHhc
Confidence            10         1123457899999999 999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.85  E-value=3.2e-21  Score=172.30  Aligned_cols=162  Identities=22%  Similarity=0.248  Sum_probs=120.3

Q ss_pred             cccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           90 FASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      |+..+.||+|+||.||++.. .+++.||||.+....   ......+.+|+.++.+++|+||+++++.+.+....      
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            66778999999999999995 478999999986432   22234678899999999999999998876543100      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~  161 (285)
T cd05630          82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR  161 (285)
T ss_pred             cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccCC
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHH
Q 045092          160 --PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRR  237 (307)
Q Consensus       160 --t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  237 (307)
                        +..|+|||++.++.++.++||||||+++|||++|+.||........   ..........       ........++..
T Consensus       162 ~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~---~~~~~~~~~~-------~~~~~~~~~~~~  231 (285)
T cd05630         162 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK---REEVERLVKE-------VQEEYSEKFSPD  231 (285)
T ss_pred             CCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch---HHHHHhhhhh-------hhhhcCccCCHH
Confidence              5689999999999999999999999999999999999964321110   1111111111       111223345567


Q ss_pred             HHHHhccccCCCCCCCCCC-----HHHHHH
Q 045092          238 TSDGNDQCSSSVTPTNRPL-----MSFVVS  262 (307)
Q Consensus       238 ~~~l~~~C~~~~dP~~RPs-----~~~vl~  262 (307)
                      +.+++..|+ +.||.+||+     +.++++
T Consensus       232 ~~~li~~~l-~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         232 ARSLCKMLL-CKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             HHHHHHHHh-hcCHHHccCCCCCchHHHHc
Confidence            889999999 999999999     778765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.85  E-value=8.8e-21  Score=165.76  Aligned_cols=161  Identities=32%  Similarity=0.453  Sum_probs=122.4

Q ss_pred             cccCCcccCCCCeeEEEEEEc-C----CCEEEEEEccCCChh-cHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           90 FASENEISERGFGPVYRGLLA-D----GKVIEVKQLSSKSKQ-GNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~~-~----~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      |...+.||+|+||.||++... .    +..||+|.+...... ..+.+..|+.++..++|+||+++++++.+....    
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~   80 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM   80 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence            355789999999999999954 3    388999999755433 567899999999999999999999887653100    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~  160 (258)
T smart00219       81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYK  160 (258)
T ss_pred             eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccccc
Confidence                                                                                            


Q ss_pred             ------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCch
Q 045092          160 ------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGF  232 (307)
Q Consensus       160 ------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  232 (307)
                            +..|+|||.+.++.++.++||||+|+++++|++ |+.|+.....   ..+.    .....      ......+.
T Consensus       161 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~---~~~~----~~~~~------~~~~~~~~  227 (258)
T smart00219      161 KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN---EEVL----EYLKK------GYRLPKPE  227 (258)
T ss_pred             cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH---HHHH----HHHhc------CCCCCCCC
Confidence                  357999999988889999999999999999999 7888753211   1111    11111      11122233


Q ss_pred             hhHHHHHHHhccccCCCCCCCCCCHHHHHHHh
Q 045092          233 KFYRRTSDGNDQCSSSVTPTNRPLMSFVVSML  264 (307)
Q Consensus       233 ~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L  264 (307)
                      ..+.++.+++.+|+ ..+|++||++.++++.|
T Consensus       228 ~~~~~~~~~i~~~l-~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      228 NCPPEIYKLMLQCW-AEDPEDRPTFSELVEIL  258 (258)
T ss_pred             cCCHHHHHHHHHHC-cCChhhCcCHHHHHhhC
Confidence            46668999999999 99999999999998765

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=3.8e-21  Score=169.65  Aligned_cols=163  Identities=20%  Similarity=0.321  Sum_probs=122.4

Q ss_pred             HHhcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC----
Q 045092           85 AATNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK----  158 (307)
Q Consensus        85 ~~t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~----  158 (307)
                      .++++|+..+.||+|+||.||+|... +++.+++|.+..... ..+.+.+|+.++.++ .|+||+++++++.....    
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND   81 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence            45789999999999999999999964 678999999865433 346799999999999 79999999998754221    


Q ss_pred             --------------------------C-----------------------------------------------------
Q 045092          159 --------------------------Q-----------------------------------------------------  159 (307)
Q Consensus       159 --------------------------~-----------------------------------------------------  159 (307)
                                                .                                                     
T Consensus        82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~  161 (275)
T cd06608          82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSA  161 (275)
T ss_pred             eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccce
Confidence                                      0                                                     


Q ss_pred             --------------Cccccchhhhcc-----CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhh
Q 045092          160 --------------PIVYMAPEYAKH-----GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRAR  220 (307)
Q Consensus       160 --------------t~~y~aPE~~~~-----~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~  220 (307)
                                    +..|+|||++..     ..++.++|||||||++++|++|+.||.......  .    ...      
T Consensus       162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~----~~~------  229 (275)
T cd06608         162 QLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR--A----LFK------  229 (275)
T ss_pred             ecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH--H----HHH------
Confidence                          556999998753     346788999999999999999999995321110  0    111      


Q ss_pred             hhcccccCCC--chhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          221 KLNGASCSKF--GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       221 ~~~~~~~~~l--~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                       +.....+.+  ...++..+.+++.+|+ ..||++||++.++++
T Consensus       230 -~~~~~~~~~~~~~~~~~~~~~li~~~l-~~dp~~Rpt~~~ll~  271 (275)
T cd06608         230 -IPRNPPPTLKSPENWSKKFNDFISECL-IKNYEQRPFMEELLE  271 (275)
T ss_pred             -hhccCCCCCCchhhcCHHHHHHHHHHh-hcChhhCcCHHHHhc
Confidence             111111111  1234568899999999 999999999999975

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.85  E-value=3.6e-21  Score=172.66  Aligned_cols=157  Identities=18%  Similarity=0.197  Sum_probs=119.6

Q ss_pred             CCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------------
Q 045092           93 ENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------------  159 (307)
Q Consensus        93 ~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------------  159 (307)
                      ...||+|+||.||++.. .++..||||.+........+.+.+|+.++.+++|+||+++++.+......            
T Consensus        27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L  106 (292)
T cd06658          27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL  106 (292)
T ss_pred             hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence            46799999999999985 46889999998765555566799999999999999999998876543110            


Q ss_pred             --------------------------------------------------------------------------Cccccc
Q 045092          160 --------------------------------------------------------------------------PIVYMA  165 (307)
Q Consensus       160 --------------------------------------------------------------------------t~~y~a  165 (307)
                                                                                                +..|+|
T Consensus       107 ~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~a  186 (292)
T cd06658         107 TDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMA  186 (292)
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCccccC
Confidence                                                                                      567999


Q ss_pred             hhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCc--hhhHHHHHHHhc
Q 045092          166 PEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFG--FKFYRRTSDGND  243 (307)
Q Consensus       166 PE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~l~~  243 (307)
                      ||++.+..++.++||||||++++||++|+.||.......   .   .. .      +.....+.+.  ...+..+.+++.
T Consensus       187 PE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~---~---~~-~------~~~~~~~~~~~~~~~~~~~~~li~  253 (292)
T cd06658         187 PEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ---A---MR-R------IRDNLPPRVKDSHKVSSVLRGFLD  253 (292)
T ss_pred             HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---H---HH-H------HHhcCCCccccccccCHHHHHHHH
Confidence            999988889999999999999999999999985322111   0   11 1      1111112211  134457888999


Q ss_pred             cccCCCCCCCCCCHHHHHHH
Q 045092          244 QCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       244 ~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .|+ ..||.+||++.++++.
T Consensus       254 ~~l-~~~P~~Rpt~~~il~~  272 (292)
T cd06658         254 LML-VREPSQRATAQELLQH  272 (292)
T ss_pred             HHc-cCChhHCcCHHHHhhC
Confidence            999 9999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.85  E-value=1e-20  Score=171.08  Aligned_cols=105  Identities=21%  Similarity=0.362  Sum_probs=85.1

Q ss_pred             CCcccCCCCeeEEEEEEc---CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----------
Q 045092           93 ENEISERGFGPVYRGLLA---DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----------  159 (307)
Q Consensus        93 ~~~lG~G~~g~Vy~~~~~---~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----------  159 (307)
                      +.+||+|+||.||+|...   ++..||+|.+....  ....+.+|+.++++++|+||+++++++......          
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE   83 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence            468999999999999954   45789999986442  234678999999999999999998876421000          


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~  163 (317)
T cd07867          84 HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN  163 (317)
T ss_pred             CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccC
Confidence                                                                                            


Q ss_pred             --------------Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcC
Q 045092          160 --------------PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVIC  199 (307)
Q Consensus       160 --------------t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~  199 (307)
                                    |+.|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus       164 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~  218 (317)
T cd07867         164 SPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC  218 (317)
T ss_pred             CCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence                          556999998876 4589999999999999999999999964

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.85  E-value=1.9e-21  Score=173.22  Aligned_cols=171  Identities=18%  Similarity=0.269  Sum_probs=122.4

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      ++|+..+.||+|+||.||+|... +++.||||.++..  .....+.+.+|++++++++|+||+++++++......     
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            46888899999999999999954 6889999988643  223346789999999999999999999988654110     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~  160 (288)
T cd07833          81 YVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTD  160 (288)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccC
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHH-----------h-hh---
Q 045092          160 ---PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLK-----------R-AR---  220 (307)
Q Consensus       160 ---t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~-----------~-~~---  220 (307)
                         +..|+|||++... .++.++||||||+++++|++|+.|+......+.  +. .....+.           . ..   
T Consensus       161 ~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~  237 (288)
T cd07833         161 YVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQ--LY-LIQKCLGPLPPSHQELFSSNPRFAG  237 (288)
T ss_pred             cccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HH-HHHHHhCCCCHHHhhhcccCccccc
Confidence               3569999999887 789999999999999999999999864322110  00 0000000           0 00   


Q ss_pred             -hhcccccC-----CCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          221 -KLNGASCS-----KFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       221 -~~~~~~~~-----~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                       ......++     ..+..++.++.+++..|+ ..+|++||+++++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l-~~~p~~Rps~~~il~  284 (288)
T cd07833         238 VAFPEPSQPESLERRYPGKVSSPALDFLKACL-RMDPKERLTCDELLQ  284 (288)
T ss_pred             cccCCCCCcHHHHHhcCCccchHHHHHHHHHh-ccCchhcccHHHHhc
Confidence             00000000     111223558999999999 999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.85  E-value=5.4e-21  Score=170.50  Aligned_cols=166  Identities=22%  Similarity=0.292  Sum_probs=125.9

Q ss_pred             HHHhcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           84 KAATNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        84 ~~~t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      ...+++|+..+.||+|+||.||+|... ++..||+|.+..... ....+.+|++++.+++|+||+++++++......   
T Consensus        15 ~~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   93 (286)
T cd06614          15 GDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV   93 (286)
T ss_pred             CCccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence            345677888899999999999999965 688999999875543 456789999999999999999999887543100   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        94 ~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~  173 (286)
T cd06614          94 MEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKR  173 (286)
T ss_pred             EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhh
Confidence                                                                                            


Q ss_pred             -----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          160 -----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       160 -----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                           +..|++||++.+..++.++|||||||++|+|++|+.|+.......      ..... .... ....   .....+
T Consensus       174 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~------~~~~~-~~~~-~~~~---~~~~~~  242 (286)
T cd06614         174 NSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR------ALFLI-TTKG-IPPL---KNPEKW  242 (286)
T ss_pred             ccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH------HHHHH-HhcC-CCCC---cchhhC
Confidence                 456999999988889999999999999999999999985322111      01111 1100 1110   111225


Q ss_pred             HHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      +..+.+++..|+ +.+|.+||++.+++.
T Consensus       243 ~~~l~~li~~~l-~~~p~~Rpt~~~il~  269 (286)
T cd06614         243 SPEFKDFLNKCL-VKDPEKRPSAEELLQ  269 (286)
T ss_pred             CHHHHHHHHHHh-ccChhhCcCHHHHhh
Confidence            568999999999 999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.85  E-value=4.3e-21  Score=175.46  Aligned_cols=180  Identities=17%  Similarity=0.182  Sum_probs=124.3

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC------
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK------  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~------  158 (307)
                      +++|...+.||+|+||.||+|.. .+++.||||.+... .......+.+|+.++.+++|+||+++++++.....      
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            57899999999999999999984 47899999998643 22344578899999999999999999876543210      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        84 ~lv~e~~~~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~  163 (336)
T cd07849          84 YIVQELMETDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHT  163 (336)
T ss_pred             EEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecccccccc
Confidence                                                                                            


Q ss_pred             -------CCccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHh-----------h
Q 045092          159 -------QPIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKR-----------A  219 (307)
Q Consensus       159 -------~t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~-----------~  219 (307)
                             .+..|+|||.+.+ ..++.++|||||||++++|++|+.||.......   ....+...+..           .
T Consensus       164 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  240 (336)
T cd07849         164 GFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH---QLNLILGVLGTPSQEDLNCIISL  240 (336)
T ss_pred             CCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHcCCCCHHHHHHhhch
Confidence                   0456999998754 568899999999999999999999995432111   00000000000           0


Q ss_pred             h---hhcc-cccCCCc-----hhhHHHHHHHhccccCCCCCCCCCCHHHHHHH--hcccccc
Q 045092          220 R---KLNG-ASCSKFG-----FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM--LEDKAEV  270 (307)
Q Consensus       220 ~---~~~~-~~~~~l~-----~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~--L~~~~~v  270 (307)
                      .   .... ...+..+     ...+.++.+++.+|+ +.+|++||++.++++.  +....+.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l-~~dP~~Rpt~~e~l~hp~~~~~~~~  301 (336)
T cd07849         241 RARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKML-TFNPHKRITVEEALAHPYLEQYHDP  301 (336)
T ss_pred             hhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHc-CCChhhCcCHHHHhcCccccccCCC
Confidence            0   0000 0001111     122347889999999 9999999999999876  5554443

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.85  E-value=6.4e-21  Score=178.15  Aligned_cols=171  Identities=12%  Similarity=0.115  Sum_probs=119.7

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc---CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLLA---DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~---~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      ..+|...+.||+|+||.||++...   .+..||+|.+...     ..+.+|+.++.+++|+||+++++++.....     
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~  165 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM  165 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence            457999999999999999999743   4578999987543     245689999999999999999876653210     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       166 e~~~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~  245 (392)
T PHA03207        166 PKYKCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCY  245 (392)
T ss_pred             hhcCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCccccccccc
Confidence                                                                                            


Q ss_pred             ---CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhh----------------
Q 045092          159 ---QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRA----------------  219 (307)
Q Consensus       159 ---~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~----------------  219 (307)
                         +|+.|+|||++....++.++|||||||++|||++|+.||..............+...+...                
T Consensus       246 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~  325 (392)
T PHA03207        246 GWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHF  325 (392)
T ss_pred             ccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHH
Confidence               0678999999999999999999999999999999999996543322111111011100000                


Q ss_pred             hhhcccccC-----CC--chhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          220 RKLNGASCS-----KF--GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       220 ~~~~~~~~~-----~l--~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ..+.....+     ..  ...++..+.+++..|+ ..||++||++.+++..
T Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml-~~dp~~Rpsa~e~l~~  375 (392)
T PHA03207        326 KQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKML-TFDQEFRPSAQDILSL  375 (392)
T ss_pred             HhhcccccCCccccchhhccCcchhHHHHHHHHh-ccChhhCCCHHHHhhC
Confidence            000000000     00  0123346778899999 9999999999999864

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.85  E-value=6e-21  Score=170.03  Aligned_cols=156  Identities=19%  Similarity=0.223  Sum_probs=114.6

Q ss_pred             ccCCCCeeEEEEEE-cCCCEEEEEEccCCCh---hcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-------------
Q 045092           96 ISERGFGPVYRGLL-ADGKVIEVKQLSSKSK---QGNREIVNEIGMISALQHPNLVKLYRLCTETLK-------------  158 (307)
Q Consensus        96 lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-------------  158 (307)
                      ||+|+||.||++.. .+++.||+|.+.....   ...+.+..|+.++.+++|+||+++.+++.....             
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            79999999999995 4789999999864322   233567889999999999999999876544310             


Q ss_pred             ------------------------------------------------------------------------------CC
Q 045092          159 ------------------------------------------------------------------------------QP  160 (307)
Q Consensus       159 ------------------------------------------------------------------------------~t  160 (307)
                                                                                                    +|
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~  160 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGT  160 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCC
Confidence                                                                                          05


Q ss_pred             ccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHH
Q 045092          161 IVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSD  240 (307)
Q Consensus       161 ~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  240 (307)
                      +.|+|||++.++.++.++|||||||++|||++|+.||........  ... .....     ...  ...++..++..+.+
T Consensus       161 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~--~~~-~~~~~-----~~~--~~~~~~~~~~~~~~  230 (280)
T cd05608         161 PGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE--NKE-LKQRI-----LND--SVTYPDKFSPASKS  230 (280)
T ss_pred             cCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh--HHH-HHHhh-----ccc--CCCCcccCCHHHHH
Confidence            689999999999999999999999999999999999964322110  000 00000     111  11223446668899


Q ss_pred             HhccccCCCCCCCCC-----CHHHHHH
Q 045092          241 GNDQCSSSVTPTNRP-----LMSFVVS  262 (307)
Q Consensus       241 l~~~C~~~~dP~~RP-----s~~~vl~  262 (307)
                      ++..|+ +.||++||     +++++++
T Consensus       231 li~~~l-~~~P~~R~~~~~~~~~~~l~  256 (280)
T cd05608         231 FCEALL-AKDPEKRLGFRDGNCDGLRT  256 (280)
T ss_pred             HHHHHh-cCCHHHhcCCCCCCHHHHhc
Confidence            999999 99999999     6677765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.85  E-value=7.4e-21  Score=169.88  Aligned_cols=159  Identities=20%  Similarity=0.261  Sum_probs=121.4

Q ss_pred             cccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---------
Q 045092           90 FASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---------  159 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---------  159 (307)
                      |...+.||+|++|.||++.. .+++.+|+|.+........+.+.+|+.++.+++|+||+++++++......         
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~  100 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG  100 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence            44457999999999999984 47889999998655545556789999999999999999999976543110         


Q ss_pred             -----------------------------------------------------------------------------Ccc
Q 045092          160 -----------------------------------------------------------------------------PIV  162 (307)
Q Consensus       160 -----------------------------------------------------------------------------t~~  162 (307)
                                                                                                   +..
T Consensus       101 ~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~  180 (285)
T cd06648         101 GALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPY  180 (285)
T ss_pred             CCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCcc
Confidence                                                                                         557


Q ss_pred             ccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC--chhhHHHHHH
Q 045092          163 YMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF--GFKFYRRTSD  240 (307)
Q Consensus       163 y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~  240 (307)
                      |+|||.+.++.++.++||||||++++||++|+.||.....      ...... +      .....+.+  ...++..+.+
T Consensus       181 y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~------~~~~~~-~------~~~~~~~~~~~~~~~~~l~~  247 (285)
T cd06648         181 WMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP------LQAMKR-I------RDNLPPKLKNLHKVSPRLRS  247 (285)
T ss_pred             ccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH------HHHHHH-H------HhcCCCCCcccccCCHHHHH
Confidence            9999999988899999999999999999999999853221      111111 1      11111111  1225568999


Q ss_pred             HhccccCCCCCCCCCCHHHHHH
Q 045092          241 GNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       241 l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ++..|+ +.+|++||++.++++
T Consensus       248 li~~~l-~~~p~~Rpt~~~il~  268 (285)
T cd06648         248 FLDRML-VRDPAQRATAAELLN  268 (285)
T ss_pred             HHHHHc-ccChhhCcCHHHHcc
Confidence            999999 999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.85  E-value=4.8e-21  Score=175.02  Aligned_cols=170  Identities=23%  Similarity=0.321  Sum_probs=126.4

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc--------CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhC-CCCCccceeeeeecCC
Q 045092           88 NNFASENEISERGFGPVYRGLLA--------DGKVIEVKQLSSKS-KQGNREIVNEIGMISAL-QHPNLVKLYRLCTETL  157 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~--------~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~  157 (307)
                      .+|.+.+.||+|+||.||++...        .+..||+|.++... ....+.+.+|++++.++ +|+||++++++|....
T Consensus        12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (334)
T cd05100          12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG   91 (334)
T ss_pred             hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence            46788899999999999999731        12368999886432 33456899999999999 8999999998764321


Q ss_pred             C-------------------------------------C-----------------------------------------
Q 045092          158 K-------------------------------------Q-----------------------------------------  159 (307)
Q Consensus       158 ~-------------------------------------~-----------------------------------------  159 (307)
                      .                                     .                                         
T Consensus        92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~  171 (334)
T cd05100          92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDN  171 (334)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCC
Confidence            0                                     0                                         


Q ss_pred             ---------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHH
Q 045092          160 ---------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDW  211 (307)
Q Consensus       160 ---------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~  211 (307)
                                                 +..|+|||.+.+..++.++||||||+++|||++ |..||....      ..+.
T Consensus       172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~------~~~~  245 (334)
T cd05100         172 VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP------VEEL  245 (334)
T ss_pred             cEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC------HHHH
Confidence                                       245999999999899999999999999999998 888885322      1111


Q ss_pred             HHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccccc
Q 045092          212 LGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAEVC  271 (307)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~v~  271 (307)
                      . ..+..      ...+..+..++..+.+++..|+ +.+|.+||++.+++..|..+..+.
T Consensus       246 ~-~~~~~------~~~~~~~~~~~~~l~~li~~cl-~~~p~~Rps~~ell~~l~~~~~~~  297 (334)
T cd05100         246 F-KLLKE------GHRMDKPANCTHELYMIMRECW-HAVPSQRPTFKQLVEDLDRVLTVT  297 (334)
T ss_pred             H-HHHHc------CCCCCCCCCCCHHHHHHHHHHc-ccChhhCcCHHHHHHHHHHHhhhc
Confidence            1 11111      1112223345568899999999 999999999999999998776433

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=7.6e-21  Score=175.30  Aligned_cols=163  Identities=18%  Similarity=0.259  Sum_probs=123.8

Q ss_pred             HHhcCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCC----Ch-hcHHHHHHHHHHHhhCC-CCCccceeeeeecCC
Q 045092           85 AATNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSK----SK-QGNREIVNEIGMISALQ-HPNLVKLYRLCTETL  157 (307)
Q Consensus        85 ~~t~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~  157 (307)
                      ...++|..++.||+|+||+|++|. ..++..||||.+...    .. ...+.+.+|+.++++++ ||||++++.++....
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            346789999999999999999998 457899999977653    12 23446678999999998 999999998765531


Q ss_pred             C-------------------------------------------------------------------------------
Q 045092          158 K-------------------------------------------------------------------------------  158 (307)
Q Consensus       158 ~-------------------------------------------------------------------------------  158 (307)
                      .                                                                               
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~  173 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPG  173 (370)
T ss_pred             eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCC
Confidence            0                                                                               


Q ss_pred             ---------CCccccchhhhccCC-CC-chhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhccccc
Q 045092          159 ---------QPIVYMAPEYAKHGY-LT-DKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC  227 (307)
Q Consensus       159 ---------~t~~y~aPE~~~~~~-~~-~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  227 (307)
                               +|+.|+|||++.+.. |+ .++||||+||+||.|++|+.||+...      ... +...+..+.    .  
T Consensus       174 ~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~------~~~-l~~ki~~~~----~--  240 (370)
T KOG0583|consen  174 EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN------VPN-LYRKIRKGE----F--  240 (370)
T ss_pred             CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc------HHH-HHHHHhcCC----c--
Confidence                     088999999998755 75 78999999999999999999997421      111 111122221    1  


Q ss_pred             CCCchhh-HHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          228 SKFGFKF-YRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       228 ~~l~~~~-~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                       .++... ..++..++.+|+ ..||..|+++.+|+.
T Consensus       241 -~~p~~~~S~~~~~Li~~mL-~~~P~~R~t~~~i~~  274 (370)
T KOG0583|consen  241 -KIPSYLLSPEARSLIEKML-VPDPSTRITLLEILE  274 (370)
T ss_pred             -cCCCCcCCHHHHHHHHHHc-CCCcccCCCHHHHhh
Confidence             122223 668899999999 999999999999983

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.85  E-value=6.1e-21  Score=190.64  Aligned_cols=168  Identities=15%  Similarity=0.171  Sum_probs=123.8

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      ++|+..++||+|+||.||+|.. .+++.||||++....   ....+.|.+|++++.+++||||+++++++.+...     
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            5788899999999999999995 468999999986432   2234579999999999999999999987643200     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk  161 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAI  161 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcce
Confidence                                                                                            


Q ss_pred             -------------------------------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCccc
Q 045092          159 -------------------------------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFY  207 (307)
Q Consensus       159 -------------------------------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~  207 (307)
                                                     +|+.|||||++.++.++.++|||||||+++||++|+.||.......   
T Consensus       162 ~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k---  238 (932)
T PRK13184        162 FKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK---  238 (932)
T ss_pred             ecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh---
Confidence                                           1457999999999999999999999999999999999996422111   


Q ss_pred             HHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCC-CHHHHHHHhccc
Q 045092          208 LLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRP-LMSFVVSMLEDK  267 (307)
Q Consensus       208 l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RP-s~~~vl~~L~~~  267 (307)
                      +..   .    .. .............+..+.+++.+|+ +.||++|| ++.++.+.|+..
T Consensus       239 i~~---~----~~-i~~P~~~~p~~~iP~~L~~LI~rcL-~~DP~kR~ss~eeLl~~Le~~  290 (932)
T PRK13184        239 ISY---R----DV-ILSPIEVAPYREIPPFLSQIAMKAL-AVDPAERYSSVQELKQDLEPH  290 (932)
T ss_pred             hhh---h----hh-ccChhhccccccCCHHHHHHHHHHc-cCChhhCcCHHHHHHHHHHHH
Confidence            000   0    00 1111111111244567889999999 99999997 566676666543

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.85  E-value=3.5e-21  Score=175.69  Aligned_cols=164  Identities=20%  Similarity=0.183  Sum_probs=120.7

Q ss_pred             CcccCCcccCCCCeeEEEEEE----cCCCEEEEEEccCCC----hhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC-
Q 045092           89 NFASENEISERGFGPVYRGLL----ADGKVIEVKQLSSKS----KQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK-  158 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~----~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~-  158 (307)
                      +|+..+.||+|+||.||+++.    .+++.||+|.+....    ....+.+.+|+.++.++ +|+||+++++++..... 
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            578889999999999999884    367899999986421    22345688999999999 59999999877654310 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~  160 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEK  160 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCC
Confidence                                                                                            


Q ss_pred             -------CCccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC
Q 045092          159 -------QPIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF  230 (307)
Q Consensus       159 -------~t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l  230 (307)
                             +|+.|+|||++.+. .++.++|||||||++|||++|+.||.........   ..+...+.       ..++.+
T Consensus       161 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~---~~~~~~~~-------~~~~~~  230 (332)
T cd05614         161 ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQ---SEVSRRIL-------KCDPPF  230 (332)
T ss_pred             CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCH---HHHHHHHh-------cCCCCC
Confidence                   06789999998764 4788999999999999999999999643322111   11111111       122344


Q ss_pred             chhhHHHHHHHhccccCCCCCCCCC-----CHHHHHHH
Q 045092          231 GFKFYRRTSDGNDQCSSSVTPTNRP-----LMSFVVSM  263 (307)
Q Consensus       231 ~~~~~~~~~~l~~~C~~~~dP~~RP-----s~~~vl~~  263 (307)
                      +...+..+.+++..|+ +.||++||     ++.++++.
T Consensus       231 ~~~~~~~~~~li~~~l-~~dp~~R~~~~~~~~~~~l~h  267 (332)
T cd05614         231 PSFIGPEAQDLLHKLL-RKDPKKRLGAGPQGASEIKEH  267 (332)
T ss_pred             CCCCCHHHHHHHHHHc-CCCHHHcCCCCCCCHHHHHcC
Confidence            4556678899999999 99999999     67777653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.85  E-value=5.5e-21  Score=173.47  Aligned_cols=153  Identities=19%  Similarity=0.209  Sum_probs=114.1

Q ss_pred             CcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCCC---------
Q 045092           94 NEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLKQ---------  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~---------  159 (307)
                      +.||+|+||.||+|... +++.||||.++...   ......+..|..++..+ +||||+++++++.+....         
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            46999999999999954 67899999986531   22345577788888765 999999999887654110         


Q ss_pred             ------------------------------------------------------------------------------Cc
Q 045092          160 ------------------------------------------------------------------------------PI  161 (307)
Q Consensus       160 ------------------------------------------------------------------------------t~  161 (307)
                                                                                                    |+
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (316)
T cd05619          81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTP  160 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCCc
Confidence                                                                                          67


Q ss_pred             cccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHH
Q 045092          162 VYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDG  241 (307)
Q Consensus       162 ~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l  241 (307)
                      .|+|||++.+..++.++|||||||++|||++|+.||......   .+.    ..+..       ..+.++...+..+.++
T Consensus       161 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~---~~~----~~i~~-------~~~~~~~~~~~~~~~l  226 (316)
T cd05619         161 DYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE---ELF----QSIRM-------DNPCYPRWLTREAKDI  226 (316)
T ss_pred             cccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH---HHH----HHHHh-------CCCCCCccCCHHHHHH
Confidence            899999999889999999999999999999999999643211   111    11111       1122333455678899


Q ss_pred             hccccCCCCCCCCCCHH-HHH
Q 045092          242 NDQCSSSVTPTNRPLMS-FVV  261 (307)
Q Consensus       242 ~~~C~~~~dP~~RPs~~-~vl  261 (307)
                      +..|+ +.||.+||++. ++.
T Consensus       227 i~~~l-~~~P~~R~~~~~~l~  246 (316)
T cd05619         227 LVKLF-VREPERRLGVKGDIR  246 (316)
T ss_pred             HHHHh-ccCHhhcCCChHHHH
Confidence            99999 99999999996 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.85  E-value=3.6e-21  Score=177.11  Aligned_cols=163  Identities=18%  Similarity=0.193  Sum_probs=124.8

Q ss_pred             HhcCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           86 ATNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      ..++|+....||+|+||.||+++ ..+|..+|+|++++..   ....+.++.|-.+|....+++||+||-.|.+....  
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL  218 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL  218 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence            45789999999999999999999 5589999999998653   33456789999999999999999999888776211  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       219 iMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~  298 (550)
T KOG0605|consen  219 IMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIE  298 (550)
T ss_pred             EEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhh
Confidence                                                                                            


Q ss_pred             ----------------------------------------------------CccccchhhhccCCCCchhHHHHHHHHH
Q 045092          160 ----------------------------------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVT  187 (307)
Q Consensus       160 ----------------------------------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl  187 (307)
                                                                          ||-|||||++.+..|+..+|.||+|||+
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~Im  378 (550)
T KOG0605|consen  299 SYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIM  378 (550)
T ss_pred             hhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHH
Confidence                                                                9999999999998999999999999999


Q ss_pred             HHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhh-hcccccCCCchhhHHHHHHHhccccCCCCCCCCCC---HHHHH
Q 045092          188 LEIESGRSNVICRTKEDKFYLLDWLGSYLKRARK-LNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPL---MSFVV  261 (307)
Q Consensus       188 ~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs---~~~vl  261 (307)
                      |||+.|-+||....+.+       .+..+...+. +....+    .....+..+++.+|+ . ||++|--   +.||-
T Consensus       379 yEmLvGyPPF~s~tp~~-------T~rkI~nwr~~l~fP~~----~~~s~eA~DLI~rll-~-d~~~RLG~~G~~EIK  443 (550)
T KOG0605|consen  379 YEMLVGYPPFCSETPQE-------TYRKIVNWRETLKFPEE----VDLSDEAKDLITRLL-C-DPENRLGSKGAEEIK  443 (550)
T ss_pred             HHHHhCCCCCCCCCHHH-------HHHHHHHHhhhccCCCc----CcccHHHHHHHHHHh-c-CHHHhcCcccHHHHh
Confidence            99999999997544322       1122211110 111111    123358889999998 7 9999974   45543

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.85  E-value=5.4e-21  Score=172.34  Aligned_cols=167  Identities=14%  Similarity=0.173  Sum_probs=124.9

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      ++|...+.||+|+||.||++... +++.||+|.+....   ......+.+|+.++..++|+||+++++.+......    
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            47888999999999999999954 67899999986543   22345788999999999999999999877554100    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~  160 (305)
T cd05609          81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLY  160 (305)
T ss_pred             ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccccc
Confidence                                                                                            


Q ss_pred             ------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhh
Q 045092          160 ------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARK  221 (307)
Q Consensus       160 ------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~  221 (307)
                                        +..|+|||++.++.++.++||||||+++|||++|+.||.....      .+.......    
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~------~~~~~~~~~----  230 (305)
T cd05609         161 EGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP------EELFGQVIS----  230 (305)
T ss_pred             ccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHh----
Confidence                              2259999999888899999999999999999999999953221      111111111    


Q ss_pred             hcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          222 LNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       222 ~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                       .....+.....++..+.+++.+|+ +.+|++||++.++.+.|+.
T Consensus       231 -~~~~~~~~~~~~~~~~~~li~~~l-~~~P~~R~~~~~~~~ll~~  273 (305)
T cd05609         231 -DDIEWPEGDEALPADAQDLISRLL-RQNPLERLGTGGAFEVKQH  273 (305)
T ss_pred             -cccCCCCccccCCHHHHHHHHHHh-ccChhhccCccCHHHHHhC
Confidence             111222222345668899999999 9999999997666666655

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.85  E-value=1.1e-20  Score=179.55  Aligned_cols=170  Identities=14%  Similarity=0.133  Sum_probs=118.3

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-------
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-------  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-------  158 (307)
                      ..+|.+.+.||+|+||.||++... +++.||||....      ..+.+|+++|++++|+|||++++++.....       
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~  241 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK  241 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            346899999999999999999964 678999996422      346789999999999999999998654310       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       242 ~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~  321 (461)
T PHA03211        242 YRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYG  321 (461)
T ss_pred             cCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccc
Confidence                                                                                            


Q ss_pred             --CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCcc-CcccHHHHHHHHHHhhhh----hcc-------
Q 045092          159 --QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKE-DKFYLLDWLGSYLKRARK----LNG-------  224 (307)
Q Consensus       159 --~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~-~~~~l~~~~~~~~~~~~~----~~~-------  224 (307)
                        +|+.|+|||++.+..++.++|||||||++|||++|..|+...... ........+...+.....    +..       
T Consensus       322 ~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~  401 (461)
T PHA03211        322 IAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLV  401 (461)
T ss_pred             cCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHH
Confidence              177899999999999999999999999999999988766432211 111111111111111110    000       


Q ss_pred             ---------cccCCCc-------hhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          225 ---------ASCSKFG-------FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       225 ---------~~~~~l~-------~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                               ...+...       ......+.+++..|+ +.||.+|||+.|+++.
T Consensus       402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL-~~DP~~RPsa~elL~h  455 (461)
T PHA03211        402 SQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRAL-TFDGARRPSAAELLRL  455 (461)
T ss_pred             HHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHc-ccChhhCcCHHHHhhC
Confidence                     0000000       012236788999999 9999999999999864

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.85  E-value=6.6e-21  Score=173.74  Aligned_cols=156  Identities=16%  Similarity=0.135  Sum_probs=116.7

Q ss_pred             CcccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC----------
Q 045092           94 NEISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK----------  158 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~----------  158 (307)
                      +.||+|+||.||++.. .+++.||+|+++...   ....+.+.+|+.++.++ +|+||+++++++.....          
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            4699999999999995 467899999997532   23345688999999888 69999999987754311          


Q ss_pred             -----------------------------------------------------------------------------CCc
Q 045092          159 -----------------------------------------------------------------------------QPI  161 (307)
Q Consensus       159 -----------------------------------------------------------------------------~t~  161 (307)
                                                                                                   +|+
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (327)
T cd05617          81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTP  160 (327)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCCc
Confidence                                                                                         067


Q ss_pred             cccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHH
Q 045092          162 VYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDG  241 (307)
Q Consensus       162 ~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l  241 (307)
                      .|+|||++.++.++.++|||||||++|||++|+.||............+.+...+...       ...++...+..+.++
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~-------~~~~p~~~~~~~~~l  233 (327)
T cd05617         161 NYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK-------PIRIPRFLSVKASHV  233 (327)
T ss_pred             ccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC-------CCCCCCCCCHHHHHH
Confidence            8999999999999999999999999999999999996433322222223233222211       122334455678899


Q ss_pred             hccccCCCCCCCCCCH
Q 045092          242 NDQCSSSVTPTNRPLM  257 (307)
Q Consensus       242 ~~~C~~~~dP~~RPs~  257 (307)
                      +.+|+ +.||.+|+++
T Consensus       234 i~~~L-~~dP~~R~~~  248 (327)
T cd05617         234 LKGFL-NKDPKERLGC  248 (327)
T ss_pred             HHHHh-ccCHHHcCCC
Confidence            99999 9999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.85  E-value=2.2e-20  Score=165.01  Aligned_cols=162  Identities=22%  Similarity=0.311  Sum_probs=115.5

Q ss_pred             CcccCCCCeeEEEEEEc---CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----------
Q 045092           94 NEISERGFGPVYRGLLA---DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----------  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~~---~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----------  159 (307)
                      +.||+|+||.||+|...   ....+|+|.+.... ......|.+|+.+++.++|+||++++++|......          
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG   80 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence            36999999999999743   23568899876442 33346789999999999999999999987644110          


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~  160 (269)
T cd05042          81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKD  160 (269)
T ss_pred             cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheeccC
Confidence                                                                                            


Q ss_pred             ----Cccccchhhhcc-------CCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhccccc
Q 045092          160 ----PIVYMAPEYAKH-------GYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC  227 (307)
Q Consensus       160 ----t~~y~aPE~~~~-------~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  227 (307)
                          ++.|+|||++..       ..++.++|||||||++|||++ |+.||......      +.........  ......
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~------~~~~~~~~~~--~~~~~~  232 (269)
T cd05042         161 CHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE------QVLKQVVREQ--DIKLPK  232 (269)
T ss_pred             CCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH------HHHHHHhhcc--CccCCC
Confidence                345999998753       356789999999999999999 77887532211      1111112111  123334


Q ss_pred             CCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhc
Q 045092          228 SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLE  265 (307)
Q Consensus       228 ~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~  265 (307)
                      +.+...++..+.+++..|+ . ||++||++.+|++.|.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~-~-dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         233 PQLDLKYSDRWYEVMQFCW-L-DPETRPTAEEVHELLT  268 (269)
T ss_pred             CcccccCCHHHHHHHHHHh-c-CcccccCHHHHHHHhc
Confidence            4444556667888888998 5 9999999999998874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.84  E-value=4.2e-21  Score=163.06  Aligned_cols=172  Identities=17%  Similarity=0.207  Sum_probs=121.6

Q ss_pred             cCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCCChh--cHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQ--GNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      ..|...++||+|.||.||+|+ ..+|+.||||+++.....  -....++||+.|+.++|+||+.|++++......     
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            356777899999999999999 568999999999755322  234688999999999999999999887654111     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        82 fm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~  161 (318)
T KOG0659|consen   82 FMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQ  161 (318)
T ss_pred             eccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccccc
Confidence                                                                                            


Q ss_pred             --Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHH--------------hhhhh
Q 045092          160 --PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLK--------------RARKL  222 (307)
Q Consensus       160 --t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~--------------~~~~~  222 (307)
                        |..|.|||.+.+ ..|+..+||||.||++.||+-|.+-|.+...-+.  + ..+-..+.              +-.++
T Consensus       162 V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQ--L-~~If~~LGTP~~~~WP~~~~lpdY~~~  238 (318)
T KOG0659|consen  162 VVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQ--L-SKIFRALGTPTPDQWPEMTSLPDYVKI  238 (318)
T ss_pred             eeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHH--H-HHHHHHcCCCCcccCccccccccHHHH
Confidence              888999998876 4699999999999999999998766543222111  1 11111110              00001


Q ss_pred             cccccCCCc---hhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          223 NGASCSKFG---FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       223 ~~~~~~~l~---~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ...-.+.+.   ........+++...+ ..||.+|.+++|.+++
T Consensus       239 ~~~P~~~~~~lf~aas~d~ldLl~~m~-~ynP~~Rita~qaL~~  281 (318)
T KOG0659|consen  239 QQFPKPPLNNLFPAASSDALDLLSKML-TYNPKKRITASQALKH  281 (318)
T ss_pred             hcCCCCccccccccccHHHHHHHHhhh-ccCchhcccHHHHhcc
Confidence            111111111   122336789999999 9999999999999864

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.84  E-value=6.5e-21  Score=169.54  Aligned_cols=172  Identities=20%  Similarity=0.254  Sum_probs=120.6

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      ++|+..+.||+|+||.||+|... +++.||+|++....  ....+.+.+|+.++++++|+||+++++++......     
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            46888899999999999999965 68999999886432  22345688999999999999999999987654110     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  160 (286)
T cd07847          81 YCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDY  160 (286)
T ss_pred             ccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccccCc
Confidence                                                                                            


Q ss_pred             --Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHH----------HHHhhhhhcccc
Q 045092          160 --PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGS----------YLKRARKLNGAS  226 (307)
Q Consensus       160 --t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~----------~~~~~~~~~~~~  226 (307)
                        +..|+|||++.+ ..++.++||||||++++||++|+.||......+.  +......          .+..........
T Consensus       161 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (286)
T cd07847         161 VATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQ--LYLIRKTLGDLIPRHQQIFSTNQFFKGLS  238 (286)
T ss_pred             ccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHHHhCCCChHHhhhccccccccccc
Confidence              356999999875 5578999999999999999999999964332111  1110000          000000000000


Q ss_pred             cCCC---------chhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          227 CSKF---------GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       227 ~~~l---------~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .+..         ....+..+.+++..|+ +.+|++||++.+++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l-~~~p~~Rp~~~eil~  282 (286)
T cd07847         239 IPEPETREPLESKFPNISSPALSFLKGCL-QMDPTERLSCEELLE  282 (286)
T ss_pred             CCCcccccCHHHHhccCCHHHHHHHHHHh-cCCccccCCHHHHhc
Confidence            0110         0123447889999999 999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.84  E-value=1.4e-20  Score=172.92  Aligned_cols=183  Identities=16%  Similarity=0.163  Sum_probs=127.9

Q ss_pred             ccHHHHHHHhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeee
Q 045092           78 FHLRQIKAATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCT  154 (307)
Q Consensus        78 ~~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~  154 (307)
                      ....++...+++|...+.||+|+||.||+|.. .+++.||+|++....  ....+.+.+|+.++.+++|+||+++++++.
T Consensus         7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~   86 (345)
T cd07877           7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT   86 (345)
T ss_pred             hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence            45567778889999999999999999999984 578999999986432  223456889999999999999999988764


Q ss_pred             cCCC----------------------------------------------------------------------------
Q 045092          155 ETLK----------------------------------------------------------------------------  158 (307)
Q Consensus       155 ~~~~----------------------------------------------------------------------------  158 (307)
                      ....                                                                            
T Consensus        87 ~~~~~~~~~~~~lv~~~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~  166 (345)
T cd07877          87 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGL  166 (345)
T ss_pred             ecccccccccEEEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccc
Confidence            2100                                                                            


Q ss_pred             ------------CCccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHH----------HH
Q 045092          159 ------------QPIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLG----------SY  215 (307)
Q Consensus       159 ------------~t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~----------~~  215 (307)
                                  .+..|+|||.+.+ ..++.++|||||||+++||++|+.||.......  .+.....          ..
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~  244 (345)
T cd07877         167 ARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID--QLKLILRLVGTPGAELLKK  244 (345)
T ss_pred             cccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCCHHHHhh
Confidence                        0567999998866 568899999999999999999999985332111  0000000          00


Q ss_pred             HHhh---h---hhcccccCCC---chhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          216 LKRA---R---KLNGASCSKF---GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       216 ~~~~---~---~~~~~~~~~l---~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      +...   .   .+.......+   ....+..+.+++..|+ +.||.+||++.+++..
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L-~~dp~~R~t~~e~l~h  300 (345)
T cd07877         245 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML-VLDSDKRITAAQALAH  300 (345)
T ss_pred             cccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHc-CCChhhcCCHHHHhcC
Confidence            0000   0   0000000000   0123447889999999 9999999999998754

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=5e-21  Score=180.67  Aligned_cols=159  Identities=16%  Similarity=0.196  Sum_probs=126.9

Q ss_pred             HHHhcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC
Q 045092           84 KAATNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK  158 (307)
Q Consensus        84 ~~~t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~  158 (307)
                      ....++|...++||+|.||+|+++... +++.+|||.+++..   ..+.+....|..++... +||.+++|+.++....+
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~  443 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH  443 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence            344678999999999999999999954 78899999998753   34566788899988877 59999999988766521


Q ss_pred             C-------------------------------------------------------------------------------
Q 045092          159 Q-------------------------------------------------------------------------------  159 (307)
Q Consensus       159 ~-------------------------------------------------------------------------------  159 (307)
                      .                                                                               
T Consensus       444 l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~  523 (694)
T KOG0694|consen  444 LFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGD  523 (694)
T ss_pred             EEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCCCC
Confidence            1                                                                               


Q ss_pred             -------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCch
Q 045092          160 -------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGF  232 (307)
Q Consensus       160 -------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  232 (307)
                             |+-|||||.+.++.|+..+|.|||||+||||+.|+.||.+.+.++   +.+-+           -..++..+.
T Consensus       524 ~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee---~FdsI-----------~~d~~~yP~  589 (694)
T KOG0694|consen  524 RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE---VFDSI-----------VNDEVRYPR  589 (694)
T ss_pred             ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH---HHHHH-----------hcCCCCCCC
Confidence                   999999999999999999999999999999999999997544322   22211           112344555


Q ss_pred             hhHHHHHHHhccccCCCCCCCCCCH
Q 045092          233 KFYRRTSDGNDQCSSSVTPTNRPLM  257 (307)
Q Consensus       233 ~~~~~~~~l~~~C~~~~dP~~RPs~  257 (307)
                      -.+.+...++.+.+ ..+|++|--+
T Consensus       590 ~ls~ea~~il~~ll-~k~p~kRLG~  613 (694)
T KOG0694|consen  590 FLSKEAIAIMRRLL-RKNPEKRLGS  613 (694)
T ss_pred             cccHHHHHHHHHHh-ccCcccccCC
Confidence            66778889999999 9999999865

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.84  E-value=4.5e-21  Score=175.89  Aligned_cols=163  Identities=18%  Similarity=0.235  Sum_probs=131.7

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      .++|...+.+|+|+||.++..+.. +++.+++|.+...  .....+...+|+.++++++|||||.+.+.+.++...    
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv   82 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV   82 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence            367888999999999999998843 6789999998644  233345788999999999999999998776655321    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~  162 (426)
T KOG0589|consen   83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSL  162 (426)
T ss_pred             EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchhh
Confidence                                                                                            


Q ss_pred             ------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchh
Q 045092          160 ------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFK  233 (307)
Q Consensus       160 ------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  233 (307)
                            |+.||.||.+.+-.|+.|+||||+||++|||++-+++|...+   ...|+.   .       +....-..++..
T Consensus       163 a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~---m~~Li~---k-------i~~~~~~Plp~~  229 (426)
T KOG0589|consen  163 ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASN---MSELIL---K-------INRGLYSPLPSM  229 (426)
T ss_pred             hheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccc---hHHHHH---H-------HhhccCCCCCcc
Confidence                  999999999999999999999999999999999999995322   222221   1       333344566677


Q ss_pred             hHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          234 FYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       234 ~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      +..++..++..|+ ..+|+.||++.+++.+
T Consensus       230 ys~el~~lv~~~l-~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  230 YSSELRSLVKSML-RKNPEHRPSALELLRR  258 (426)
T ss_pred             ccHHHHHHHHHHh-hcCCccCCCHHHHhhC
Confidence            8889999999999 9999999999999876

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.84  E-value=1.3e-20  Score=167.50  Aligned_cols=162  Identities=19%  Similarity=0.279  Sum_probs=117.3

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC-hhcHHHHHHHHHH-HhhCCCCCccceeeeeecCCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS-KQGNREIVNEIGM-ISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      ++|+..+.||+|+||.||++... +|+.||+|+++... ......+..|+.+ ++.++|+||+++++++......     
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            47888899999999999999954 78999999986542 2233456667665 5556999999999887543110     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~  160 (283)
T cd06617          81 VMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAK  160 (283)
T ss_pred             hhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence                                                                                            


Q ss_pred             -----Cccccchhhhcc----CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC
Q 045092          160 -----PIVYMAPEYAKH----GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF  230 (307)
Q Consensus       160 -----t~~y~aPE~~~~----~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l  230 (307)
                           +..|+|||.+.+    ..++.++|+||||++++||++|+.|+..... .   . +.+....       ....+.+
T Consensus       161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-~---~-~~~~~~~-------~~~~~~~  228 (283)
T cd06617         161 TIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT-P---F-QQLKQVV-------EEPSPQL  228 (283)
T ss_pred             ccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc-C---H-HHHHHHH-------hcCCCCC
Confidence                 556999998764    4468899999999999999999999853211 1   1 1111111       1111222


Q ss_pred             c-hhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          231 G-FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       231 ~-~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      + ..++..+.+++..|+ ..+|.+||++.+++.
T Consensus       229 ~~~~~~~~l~~li~~~l-~~~p~~Rp~~~~il~  260 (283)
T cd06617         229 PAEKFSPEFQDFVNKCL-KKNYKERPNYPELLQ  260 (283)
T ss_pred             CccccCHHHHHHHHHHc-cCChhhCcCHHHHhc
Confidence            2 235668999999999 999999999999975

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.84  E-value=8.3e-21  Score=172.27  Aligned_cols=153  Identities=18%  Similarity=0.236  Sum_probs=113.1

Q ss_pred             CcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC----------
Q 045092           94 NEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK----------  158 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~----------  158 (307)
                      +.||+|+||.||+|... +++.||||.++...   ....+.+..|..++... +|+||+++++++.....          
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999954 68899999986432   22344566777777655 89999999987654310          


Q ss_pred             -----------------------------------------------------------------------------CCc
Q 045092          159 -----------------------------------------------------------------------------QPI  161 (307)
Q Consensus       159 -----------------------------------------------------------------------------~t~  161 (307)
                                                                                                   +|+
T Consensus        81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~  160 (316)
T cd05592          81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTP  160 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCCc
Confidence                                                                                         077


Q ss_pred             cccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHH
Q 045092          162 VYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDG  241 (307)
Q Consensus       162 ~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l  241 (307)
                      .|+|||++.+..++.++|||||||++|||++|+.||......      ..... +..       ..+.++..++..+.++
T Consensus       161 ~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~------~~~~~-i~~-------~~~~~~~~~~~~~~~l  226 (316)
T cd05592         161 DYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED------ELFDS-ILN-------DRPHFPRWISKEAKDC  226 (316)
T ss_pred             cccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH------HHHHH-HHc-------CCCCCCCCCCHHHHHH
Confidence            899999999889999999999999999999999999643211      11111 111       1233344456688899


Q ss_pred             hccccCCCCCCCCCCHH-HHH
Q 045092          242 NDQCSSSVTPTNRPLMS-FVV  261 (307)
Q Consensus       242 ~~~C~~~~dP~~RPs~~-~vl  261 (307)
                      +..|+ +.||.+||++. +++
T Consensus       227 l~~~l-~~~P~~R~~~~~~l~  246 (316)
T cd05592         227 LSKLF-ERDPTKRLGVDGDIR  246 (316)
T ss_pred             HHHHc-cCCHHHcCCChHHHH
Confidence            99999 99999999875 443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.84  E-value=4.3e-21  Score=168.42  Aligned_cols=161  Identities=19%  Similarity=0.200  Sum_probs=122.6

Q ss_pred             CcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           89 NFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      +|...+.||.|+||.||++... +++.||+|.+....   ....+.+.+|++++++++|+||+++++++.+....     
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            5788899999999999999954 68999999986432   23456899999999999999999998766543100     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~  160 (258)
T cd05578          81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTS  160 (258)
T ss_pred             CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCccccccC
Confidence                                                                                            


Q ss_pred             -CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHH
Q 045092          160 -PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRT  238 (307)
Q Consensus       160 -t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  238 (307)
                       +..|+|||++.+..++.++|+||||+++++|++|+.|+.......    .+.......       ...+..+...+..+
T Consensus       161 ~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~~~~-------~~~~~~~~~~~~~~  229 (258)
T cd05578         161 GTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI----RDQIRAKQE-------TADVLYPATWSTEA  229 (258)
T ss_pred             CChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH----HHHHHHHhc-------cccccCcccCcHHH
Confidence             557999999998889999999999999999999999996443221    111111111       02233334456789


Q ss_pred             HHHhccccCCCCCCCCCCH--HHHH
Q 045092          239 SDGNDQCSSSVTPTNRPLM--SFVV  261 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RPs~--~~vl  261 (307)
                      .+++.+|+ +.||.+||++  .+++
T Consensus       230 ~~~i~~~l-~~~p~~R~~~~~~~l~  253 (258)
T cd05578         230 IDAINKLL-ERDPQKRLGDNLKDLK  253 (258)
T ss_pred             HHHHHHHc-cCChhHcCCccHHHHh
Confidence            99999999 9999999999  6654

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.84  E-value=6.3e-21  Score=177.48  Aligned_cols=164  Identities=17%  Similarity=0.181  Sum_probs=118.6

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC------
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK------  158 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~------  158 (307)
                      .|...+.||+|+||.||+|.. .+++.||||++....   ......+.+|+.++.+++|+||+++++++.+...      
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            578889999999999999994 478899999986432   2334578999999999999999999988765410      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~  161 (381)
T cd05626          82 YIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQ  161 (381)
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccccc
Confidence                                                                                            


Q ss_pred             ------------------------------------------------CCccccchhhhccCCCCchhHHHHHHHHHHHH
Q 045092          159 ------------------------------------------------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEI  190 (307)
Q Consensus       159 ------------------------------------------------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~el  190 (307)
                                                                      +|+.|+|||.+.+..++.++|||||||++|||
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~el  241 (381)
T cd05626         162 KGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEM  241 (381)
T ss_pred             ccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHH
Confidence                                                            12469999999988899999999999999999


Q ss_pred             HhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhcc--ccCCCCCCCCCCHHHHHHH
Q 045092          191 ESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQ--CSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       191 ltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~--C~~~~dP~~RPs~~~vl~~  263 (307)
                      ++|+.||........      ........   .....+ ....++.++.+++.+  |. ..++..||++.+++..
T Consensus       242 ltG~~Pf~~~~~~~~------~~~i~~~~---~~~~~~-~~~~~s~~~~dli~~ll~~-~~~~~~R~~~~~~l~h  305 (381)
T cd05626         242 LVGQPPFLAPTPTET------QLKVINWE---NTLHIP-PQVKLSPEAVDLITKLCCS-AEERLGRNGADDIKAH  305 (381)
T ss_pred             HhCCCCCcCCCHHHH------HHHHHccc---cccCCC-CCCCCCHHHHHHHHHHccC-cccccCCCCHHHHhcC
Confidence            999999964332110      11111000   000011 111234566677754  66 7778889999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.84  E-value=2.3e-20  Score=162.72  Aligned_cols=162  Identities=20%  Similarity=0.301  Sum_probs=125.4

Q ss_pred             CcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh--hcHHHHHHHHHHHhhCCCCCccceeeeeecC--CCC----
Q 045092           89 NFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK--QGNREIVNEIGMISALQHPNLVKLYRLCTET--LKQ----  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~----  159 (307)
                      +|...+.||+|++|.||+|... ++..|++|.+.....  ...+.+.+|+.++++++|+||+++++.+...  ...    
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            4677889999999999999965 789999999865432  4467899999999999999999999887664  110    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~  160 (260)
T cd06606          81 EYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGT  160 (260)
T ss_pred             EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccc
Confidence                                                                                            


Q ss_pred             -----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          160 -----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       160 -----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                           +..|++||.+..+..+.++||||||+++++|++|+.|+....     ..........      .....+.++...
T Consensus       161 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~------~~~~~~~~~~~~  229 (260)
T cd06606         161 GSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG-----NPMAALYKIG------SSGEPPEIPEHL  229 (260)
T ss_pred             cCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----chHHHHHhcc------ccCCCcCCCccc
Confidence                 446999999988889999999999999999999999996433     1111111110      011223344455


Q ss_pred             HHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      +..+.+++.+|+ +.+|.+||++.++++
T Consensus       230 ~~~l~~~i~~~l-~~~p~~Rp~~~~ll~  256 (260)
T cd06606         230 SEEAKDFLRKCL-RRDPKKRPTADELLQ  256 (260)
T ss_pred             CHHHHHHHHHhC-cCChhhCCCHHHHhh
Confidence            678999999999 999999999999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.84  E-value=6.7e-21  Score=173.20  Aligned_cols=149  Identities=18%  Similarity=0.217  Sum_probs=112.6

Q ss_pred             CcccCCCCeeEEEEEEc-CCCEEEEEEccCC---ChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCCC---------
Q 045092           94 NEISERGFGPVYRGLLA-DGKVIEVKQLSSK---SKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLKQ---------  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~---------  159 (307)
                      +.||+|+||.||++... +++.||||.+...   .....+.+..|+.++..+ +|+||+++++++......         
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999954 6889999998643   223345678899988877 799999999877554110         


Q ss_pred             ------------------------------------------------------------------------------Cc
Q 045092          160 ------------------------------------------------------------------------------PI  161 (307)
Q Consensus       160 ------------------------------------------------------------------------------t~  161 (307)
                                                                                                    |+
T Consensus        81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~  160 (320)
T cd05590          81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTP  160 (320)
T ss_pred             chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCc
Confidence                                                                                          67


Q ss_pred             cccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHH
Q 045092          162 VYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDG  241 (307)
Q Consensus       162 ~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l  241 (307)
                      .|+|||++.+..++.++|||||||++|||++|+.||.....      ..... .+..+.       ..++...+..+.++
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~------~~~~~-~i~~~~-------~~~~~~~~~~~~~l  226 (320)
T cd05590         161 DYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE------DDLFE-AILNDE-------VVYPTWLSQDAVDI  226 (320)
T ss_pred             cccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH------HHHHH-HHhcCC-------CCCCCCCCHHHHHH
Confidence            89999999988999999999999999999999999964321      11111 111111       12233455688999


Q ss_pred             hccccCCCCCCCCCCH
Q 045092          242 NDQCSSSVTPTNRPLM  257 (307)
Q Consensus       242 ~~~C~~~~dP~~RPs~  257 (307)
                      +..|+ +.||.+||++
T Consensus       227 i~~~L-~~dP~~R~~~  241 (320)
T cd05590         227 LKAFM-TKNPTMRLGS  241 (320)
T ss_pred             HHHHc-ccCHHHCCCC
Confidence            99999 9999999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=1.8e-21  Score=178.58  Aligned_cols=164  Identities=17%  Similarity=0.171  Sum_probs=122.5

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      ++|...+.||+|+||.||+|... +++.||||+++...   ......+.+|+.++..++|+||+++++++.+...     
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            47888999999999999999954 78999999986432   2334678999999999999999999877654310     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~  160 (350)
T cd05573          81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYY  160 (350)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccc
Confidence                                                                                            


Q ss_pred             -------------------------------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCccc
Q 045092          159 -------------------------------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFY  207 (307)
Q Consensus       159 -------------------------------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~  207 (307)
                                                     +|+.|+|||.+.+..++.++|||||||++|||++|+.||......    
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~----  236 (350)
T cd05573         161 LNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ----  236 (350)
T ss_pred             ccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH----
Confidence                                           145699999999999999999999999999999999999643311    


Q ss_pred             HHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCC-HHHHHHH
Q 045092          208 LLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPL-MSFVVSM  263 (307)
Q Consensus       208 l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs-~~~vl~~  263 (307)
                        ....... ..  ......+. ...++..+.+++..|+ . ||.+||+ +.++++.
T Consensus       237 --~~~~~i~-~~--~~~~~~p~-~~~~~~~~~~li~~ll-~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         237 --ETYNKII-NW--KESLRFPP-DPPVSPEAIDLICRLL-C-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             --HHHHHHh-cc--CCcccCCC-CCCCCHHHHHHHHHHc-c-ChhhcCCCHHHHhcC
Confidence              1111111 10  00111111 1124668889999999 7 9999999 9999864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.84  E-value=7.3e-21  Score=186.48  Aligned_cols=173  Identities=25%  Similarity=0.382  Sum_probs=134.1

Q ss_pred             HHHHHhcCcccCCcccCCCCeeEEEEEEc----C----CCEEEEEEccCCC-hhcHHHHHHHHHHHhhC-CCCCccceee
Q 045092           82 QIKAATNNFASENEISERGFGPVYRGLLA----D----GKVIEVKQLSSKS-KQGNREIVNEIGMISAL-QHPNLVKLYR  151 (307)
Q Consensus        82 el~~~t~~f~~~~~lG~G~~g~Vy~~~~~----~----~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g  151 (307)
                      .++...++....+.||+|.||.|++|...    .    ...||||.++... ....+.+..|+++|+.+ +|+||+.++|
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG  369 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG  369 (609)
T ss_pred             ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence            45555666666779999999999999832    1    3579999998553 34567899999999999 7999999999


Q ss_pred             eeecCC---------------------C-----------------C----------------------------------
Q 045092          152 LCTETL---------------------K-----------------Q----------------------------------  159 (307)
Q Consensus       152 ~~~~~~---------------------~-----------------~----------------------------------  159 (307)
                      +|....                     .                 .                                  
T Consensus       370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNV  449 (609)
T KOG0200|consen  370 ACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNV  449 (609)
T ss_pred             eeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhE
Confidence            987620                     1                 0                                  


Q ss_pred             ----------------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccC
Q 045092          160 ----------------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKED  204 (307)
Q Consensus       160 ----------------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~  204 (307)
                                                        +..|||||.+....|+.|+|||||||+||||+| |..||....   
T Consensus       450 Li~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~---  526 (609)
T KOG0200|consen  450 LITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP---  526 (609)
T ss_pred             EecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC---
Confidence                                              345999999999999999999999999999999 889985311   


Q ss_pred             cccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          205 KFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       205 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                        ...+. ...++.|.      ....+..+..++.+++..|| +.+|++||++.++.+.++..
T Consensus       527 --~~~~l-~~~l~~G~------r~~~P~~c~~eiY~iM~~CW-~~~p~~RP~F~~~~~~~~~~  579 (609)
T KOG0200|consen  527 --PTEEL-LEFLKEGN------RMEQPEHCSDEIYDLMKSCW-NADPEDRPTFSECVEFFEKH  579 (609)
T ss_pred             --cHHHH-HHHHhcCC------CCCCCCCCCHHHHHHHHHHh-CCCcccCCCHHHHHHHHHHH
Confidence              11222 22344333      33445566779999999999 99999999999999988873

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.84  E-value=1.5e-20  Score=167.24  Aligned_cols=170  Identities=17%  Similarity=0.240  Sum_probs=118.4

Q ss_pred             cccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           90 FASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      |+..+.||.|++|.||+|.. .+|..||+|++....  ......+.+|++++++++|+|++++++++.+....       
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            56678999999999999995 478999999986442  22345788999999999999999999887654110       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~  160 (283)
T cd07835          81 DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEV  160 (283)
T ss_pred             CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCccc
Confidence                                                                                            


Q ss_pred             -CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHH----------HHH---hh-hhhc
Q 045092          160 -PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGS----------YLK---RA-RKLN  223 (307)
Q Consensus       160 -t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~----------~~~---~~-~~~~  223 (307)
                       +..|+|||++.++ .++.++||||||+++|||++|+.||.......  .+......          ...   .. ..+.
T Consensus       161 ~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (283)
T cd07835         161 VTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID--QLFRIFRTLGTPDEDVWPGVTSLPDYKPTFP  238 (283)
T ss_pred             cccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCChHHhhhhhhchhhhhhcc
Confidence             4569999987654 57899999999999999999999985332111  11110000          000   00 0000


Q ss_pred             ccccCCC---chhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          224 GASCSKF---GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       224 ~~~~~~l---~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ....+..   ...++..+.+++.+|+ +.+|.+||++.+++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~li~~~l-~~~P~~Rpt~~~il~  279 (283)
T cd07835         239 KWARQDLSKVVPNLDEDGLDLLSKML-VYDPAKRISAKAALQ  279 (283)
T ss_pred             cccccchhhhcCCCCHHHHHHHHHHh-cCChhhCcCHHHHhc
Confidence            0001111   1223457889999999 999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.84  E-value=6.4e-21  Score=173.27  Aligned_cols=155  Identities=15%  Similarity=0.180  Sum_probs=116.2

Q ss_pred             CcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCCC---------
Q 045092           94 NEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLKQ---------  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~---------  159 (307)
                      +.||+|+||.||+|... +++.||||.++...   ......+..|..++..+ +|+||+++++++......         
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            46999999999999954 67899999986432   23345678899998876 899999999887654110         


Q ss_pred             ------------------------------------------------------------------------------Cc
Q 045092          160 ------------------------------------------------------------------------------PI  161 (307)
Q Consensus       160 ------------------------------------------------------------------------------t~  161 (307)
                                                                                                    |+
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~  160 (321)
T cd05591          81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTP  160 (321)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccCc
Confidence                                                                                          67


Q ss_pred             cccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHH
Q 045092          162 VYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDG  241 (307)
Q Consensus       162 ~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l  241 (307)
                      .|+|||++.+..++.++|||||||++|||++|+.||......      ....... .+       ....+...+.++.++
T Consensus       161 ~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~------~~~~~i~-~~-------~~~~p~~~~~~~~~l  226 (321)
T cd05591         161 DYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED------DLFESIL-HD-------DVLYPVWLSKEAVSI  226 (321)
T ss_pred             cccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH------HHHHHHH-cC-------CCCCCCCCCHHHHHH
Confidence            899999999889999999999999999999999999643211      1111111 11       111223345688899


Q ss_pred             hccccCCCCCCCCC-------CHHHHHHH
Q 045092          242 NDQCSSSVTPTNRP-------LMSFVVSM  263 (307)
Q Consensus       242 ~~~C~~~~dP~~RP-------s~~~vl~~  263 (307)
                      +..|+ +.||++||       ++.++++.
T Consensus       227 l~~~L-~~dp~~R~~~~~~~~~~~~~~~h  254 (321)
T cd05591         227 LKAFM-TKNPNKRLGCVASQGGEDAIKQH  254 (321)
T ss_pred             HHHHh-ccCHHHcCCCCCCCCCHHHHhcC
Confidence            99999 99999999       77777643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=5e-22  Score=185.57  Aligned_cols=161  Identities=22%  Similarity=0.286  Sum_probs=123.9

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      +.|.++..||.|+||.||++... ++-..|-|.+...+....++|+-||.+|..+.||+||+|++.|.-....       
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC  111 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC  111 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence            44677789999999999999954 5556778988877788889999999999999999999998754332110       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       112 ~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFI  191 (1187)
T KOG0579|consen  112 GGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFI  191 (1187)
T ss_pred             CCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhhcccc
Confidence                                                                                            


Q ss_pred             -Cccccchhhhc-----cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC--c
Q 045092          160 -PIVYMAPEYAK-----HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF--G  231 (307)
Q Consensus       160 -t~~y~aPE~~~-----~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l--~  231 (307)
                       |++|||||++.     ...|+.++||||||++|.||..+.+|.....+      ...+..       +...-.|.|  +
T Consensus       192 GTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp------MRVllK-------iaKSePPTLlqP  258 (1187)
T KOG0579|consen  192 GTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP------MRVLLK-------IAKSEPPTLLQP  258 (1187)
T ss_pred             CCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch------HHHHHH-------HhhcCCCcccCc
Confidence             99999999876     35689999999999999999999999753222      111111       222223333  2


Q ss_pred             hhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          232 FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       232 ~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ......+.++...|+ ..||..||++.++++
T Consensus       259 S~Ws~~F~DfLk~cL-~Knp~~Rp~aaqll~  288 (1187)
T KOG0579|consen  259 SHWSRSFSDFLKRCL-VKNPRNRPPAAQLLK  288 (1187)
T ss_pred             chhhhHHHHHHHHHH-hcCCccCCCHHHHhh
Confidence            233448999999999 999999999999875

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.84  E-value=7.8e-21  Score=172.96  Aligned_cols=154  Identities=14%  Similarity=0.142  Sum_probs=115.8

Q ss_pred             CcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCC-CCccceeeeeecCCC-----
Q 045092           89 NFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK---SKQGNREIVNEIGMISALQH-PNLVKLYRLCTETLK-----  158 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h-~niv~l~g~~~~~~~-----  158 (307)
                      +|...+.||+|+||.||+|... +++.||||++...   .....+.+..|+.++..+.| ++|+++++++.....     
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            5778899999999999999954 6789999998643   22345678889999999965 568888776654310     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~  160 (324)
T cd05587          81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRT  160 (324)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceee
Confidence                                                                                            


Q ss_pred             --CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          159 --QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       159 --~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                        +|+.|+|||++.++.++.++|||||||++|||++|+.||......   .+.    ..+..       ....++...+.
T Consensus       161 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~---~~~----~~i~~-------~~~~~~~~~~~  226 (324)
T cd05587         161 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED---ELF----QSIME-------HNVSYPKSLSK  226 (324)
T ss_pred             ecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH---HHH----HHHHc-------CCCCCCCCCCH
Confidence              067899999999999999999999999999999999999643211   111    11111       11233345566


Q ss_pred             HHHHHhccccCCCCCCCCCCH
Q 045092          237 RTSDGNDQCSSSVTPTNRPLM  257 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~  257 (307)
                      .+.+++.+|+ ..||.+|++.
T Consensus       227 ~~~~li~~~l-~~~P~~R~~~  246 (324)
T cd05587         227 EAVSICKGLL-TKHPAKRLGC  246 (324)
T ss_pred             HHHHHHHHHh-hcCHHHcCCC
Confidence            8899999999 9999999976

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.84  E-value=6.5e-21  Score=173.41  Aligned_cols=154  Identities=14%  Similarity=0.123  Sum_probs=115.7

Q ss_pred             CcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC-----
Q 045092           89 NFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~-----  158 (307)
                      +|...+.||+|+||.||+|... +++.||||.+....   ......+..|..++..+ +|++|+++++++.....     
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            5778899999999999999954 67899999986432   22334577788888877 68999999887654310     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~  160 (323)
T cd05616          81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKT  160 (323)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCcccc
Confidence                                                                                            


Q ss_pred             --CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          159 --QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       159 --~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                        +|+.|+|||++.++.++.++|||||||++|||++|+.||......   .+    ...+...       ...++...+.
T Consensus       161 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~---~~----~~~i~~~-------~~~~p~~~s~  226 (323)
T cd05616         161 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED---EL----FQSIMEH-------NVAYPKSMSK  226 (323)
T ss_pred             CCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH---HH----HHHHHhC-------CCCCCCcCCH
Confidence              067899999999999999999999999999999999999643211   11    1111111       1223344566


Q ss_pred             HHHHHhccccCCCCCCCCCCH
Q 045092          237 RTSDGNDQCSSSVTPTNRPLM  257 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~  257 (307)
                      ++.+++..|+ +.+|.+|++.
T Consensus       227 ~~~~li~~~l-~~~p~~R~~~  246 (323)
T cd05616         227 EAVAICKGLM-TKHPGKRLGC  246 (323)
T ss_pred             HHHHHHHHHc-ccCHHhcCCC
Confidence            8899999999 9999999984

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=3.7e-21  Score=177.70  Aligned_cols=163  Identities=17%  Similarity=0.200  Sum_probs=119.6

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      ++|+..+.||+|+||.||++.. .+++.||||++....   ......+.+|+.++..++|+||+++++++.+...     
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            4788999999999999999995 478999999986431   2334568899999999999999999988765410     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~  160 (364)
T cd05599          81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFY  160 (364)
T ss_pred             CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccccc
Confidence                                                                                            


Q ss_pred             ----------------------------------------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCc
Q 045092          159 ----------------------------------------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVI  198 (307)
Q Consensus       159 ----------------------------------------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~  198 (307)
                                                              +|+.|+|||++.+..++.++|||||||+++||++|+.||.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~  240 (364)
T cd05599         161 RILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFC  240 (364)
T ss_pred             ccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCC
Confidence                                                    1346999999999999999999999999999999999996


Q ss_pred             CCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCC---HHHHHH
Q 045092          199 CRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPL---MSFVVS  262 (307)
Q Consensus       199 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs---~~~vl~  262 (307)
                      .....      ....... ...  .....+. ....+..+.+++..|+ . +|.+|++   +.+++.
T Consensus       241 ~~~~~------~~~~~i~-~~~--~~~~~~~-~~~~s~~~~~li~~ll-~-~p~~R~~~~~~~~ll~  295 (364)
T cd05599         241 SDNPQ------ETYRKII-NWK--ETLQFPD-EVPLSPEAKDLIKRLC-C-EAERRLGNNGVNEIKS  295 (364)
T ss_pred             CCCHH------HHHHHHH-cCC--CccCCCC-CCCCCHHHHHHHHHHc-c-CHhhcCCCCCHHHHhc
Confidence            43321      1111111 100  0000011 1124557788888888 6 8999997   888875

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.84  E-value=1.7e-21  Score=176.86  Aligned_cols=151  Identities=19%  Similarity=0.208  Sum_probs=113.8

Q ss_pred             CcccCCCCeeEEEEEE----cCCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--------
Q 045092           94 NEISERGFGPVYRGLL----ADGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--------  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~----~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--------  159 (307)
                      +.||+|+||.||++..    .+|+.||+|++....  ......+.+|++++.+++|+||+++++++.+....        
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            5799999999999873    367899999986432  22334678899999999999999999887654110        


Q ss_pred             -------------------------------------------------------------------------------C
Q 045092          160 -------------------------------------------------------------------------------P  160 (307)
Q Consensus       160 -------------------------------------------------------------------------------t  160 (307)
                                                                                                     |
T Consensus        82 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~  161 (318)
T cd05582          82 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGT  161 (318)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccCC
Confidence                                                                                           6


Q ss_pred             ccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHH
Q 045092          161 IVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSD  240 (307)
Q Consensus       161 ~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  240 (307)
                      +.|+|||.+.+..++.++|||||||++|||++|+.||.....      ...... +...       ...++...+..+.+
T Consensus       162 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~------~~~~~~-i~~~-------~~~~p~~~~~~~~~  227 (318)
T cd05582         162 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR------KETMTM-ILKA-------KLGMPQFLSPEAQS  227 (318)
T ss_pred             hhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH------HHHHHH-HHcC-------CCCCCCCCCHHHHH
Confidence            679999999988899999999999999999999999964321      111111 1111       11233445668889


Q ss_pred             HhccccCCCCCCCCCCHHH
Q 045092          241 GNDQCSSSVTPTNRPLMSF  259 (307)
Q Consensus       241 l~~~C~~~~dP~~RPs~~~  259 (307)
                      ++..|+ +.||.+||++.+
T Consensus       228 li~~~l-~~~P~~R~~a~~  245 (318)
T cd05582         228 LLRALF-KRNPANRLGAGP  245 (318)
T ss_pred             HHHHHh-hcCHhHcCCCCC
Confidence            999999 999999999544

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.84  E-value=1.5e-20  Score=169.75  Aligned_cols=162  Identities=22%  Similarity=0.326  Sum_probs=119.8

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      .|+..+.||+|+||.||+|.. .++..+|+|.+...   .......+.+|+++++.++|+|++++++++......     
T Consensus        16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   95 (308)
T cd06634          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (308)
T ss_pred             HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence            366678899999999999995 46789999988632   223345788999999999999999999887654111     


Q ss_pred             ------------------------------------------------------------------------------Cc
Q 045092          160 ------------------------------------------------------------------------------PI  161 (307)
Q Consensus       160 ------------------------------------------------------------------------------t~  161 (307)
                                                                                                    +.
T Consensus        96 ~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  175 (308)
T cd06634          96 YCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTP  175 (308)
T ss_pred             ccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCcccccCCc
Confidence                                                                                          57


Q ss_pred             cccchhhhc---cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHH
Q 045092          162 VYMAPEYAK---HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRT  238 (307)
Q Consensus       162 ~y~aPE~~~---~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  238 (307)
                      .|+|||++.   .+.++.++|||||||+++||++|+.|+......      ..... +..     ..........++..+
T Consensus       176 ~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~-~~~-----~~~~~~~~~~~~~~~  243 (308)
T cd06634         176 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------SALYH-IAQ-----NESPALQSGHWSEYF  243 (308)
T ss_pred             cccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH------HHHHH-Hhh-----cCCCCcCcccccHHH
Confidence            899999874   456888999999999999999999998532111      11111 111     111111123455678


Q ss_pred             HHHhccccCCCCCCCCCCHHHHHHH
Q 045092          239 SDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .+++.+|+ +.+|++||++.+++..
T Consensus       244 ~~li~~cl-~~~P~~Rp~~~~ll~~  267 (308)
T cd06634         244 RNFVDSCL-QKIPQDRPTSEVLLKH  267 (308)
T ss_pred             HHHHHHHh-hCCcccCCCHHHHhhC
Confidence            99999999 9999999999999865

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.84  E-value=1.5e-20  Score=167.26  Aligned_cols=171  Identities=16%  Similarity=0.227  Sum_probs=117.3

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCCh--hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSK--QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      +|+..+.||+|+||.||+|.. .+|..||+|.++....  .....+.+|+.++++++|+||+++++++.+....      
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            467788999999999999995 4789999999864322  2235678899999999999999988776543110      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  160 (284)
T cd07839          81 CDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEV  160 (284)
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCCc
Confidence                                                                                            


Q ss_pred             -CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHh--------hhhhccc-ccC
Q 045092          160 -PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKR--------ARKLNGA-SCS  228 (307)
Q Consensus       160 -t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~--------~~~~~~~-~~~  228 (307)
                       +..|+|||++.++ .++.++|||||||+++||++|..|+.......  .....+......        ....... ..+
T Consensus       161 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd07839         161 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD--DQLKRIFRLLGTPTEESWPGVSKLPDYKPYP  238 (284)
T ss_pred             cccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHH--HHHHHHHHHhCCCChHHhHHhhhcccccccC
Confidence             5679999988765 47899999999999999999999874322111  111111000000        0000000 000


Q ss_pred             CC---------chhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          229 KF---------GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       229 ~l---------~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ..         ....+.++.+++.+|+ +.||.+|||+.+++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~li~~~l-~~~P~~R~t~~~il~  280 (284)
T cd07839         239 MYPATTSLVNVVPKLNSTGRDLLQNLL-VCNPVQRISAEEALQ  280 (284)
T ss_pred             CCCCcchhhhhcccCCHHHHHHHHHHh-cCChhhcCCHHHHhc
Confidence            00         0123447889999999 999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.84  E-value=5.5e-21  Score=170.89  Aligned_cols=174  Identities=15%  Similarity=0.223  Sum_probs=120.8

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChh-cHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           86 ATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQ-GNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      ++++|...+.||+|+||.||+|.. .++..||+|.+...... ....+.+|+.++..++|+||+++++++......    
T Consensus         3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   82 (291)
T cd07870           3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF   82 (291)
T ss_pred             ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence            467899999999999999999984 47889999998654322 234678999999999999999999887654110    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        83 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~  162 (291)
T cd07870          83 EYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSS  162 (291)
T ss_pred             ecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCC
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHH-----------Hh-hhhhc
Q 045092          160 ---PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYL-----------KR-ARKLN  223 (307)
Q Consensus       160 ---t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~-----------~~-~~~~~  223 (307)
                         +..|+|||++.++ .++.++|||||||+++||++|+.||........ .+.. .+..+           .. .....
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  240 (291)
T cd07870         163 EVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFE-QLEK-IWTVLGVPTEDTWPGVSKLPNYKP  240 (291)
T ss_pred             ccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHH-HHHH-HHHHcCCCChhhhhhhhhcccccc
Confidence               5679999988754 578899999999999999999999964332110 0100 00000           00 00000


Q ss_pred             cc---ccCC-Cc-----hhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          224 GA---SCSK-FG-----FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       224 ~~---~~~~-l~-----~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ..   ..+. +.     ...+..+.+++.+|+ +.||.+|||+.+++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l-~~dp~~R~t~~~~l~  287 (291)
T cd07870         241 EWFLPCKPQQLRVVWKRLSRPPKAEDLASQML-MMFPKDRISAQDALL  287 (291)
T ss_pred             hhccccCCcchhhhccccCCChHHHHHHHHHh-CcCcccCcCHHHHhc
Confidence            00   0000 00     011336788999999 999999999999864

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.84  E-value=8.9e-21  Score=190.34  Aligned_cols=163  Identities=18%  Similarity=0.245  Sum_probs=122.6

Q ss_pred             HHhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC---
Q 045092           85 AATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK---  158 (307)
Q Consensus        85 ~~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~---  158 (307)
                      ...++|.+.+.||+|+||.||++.. .++..||+|.+...  .......|..|+.++.+++|||||++++++.....   
T Consensus        10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l   89 (1021)
T PTZ00266         10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL   89 (1021)
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence            3467899999999999999999995 46788999988643  23345678999999999999999999986633200   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~  169 (1021)
T PTZ00266         90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT  169 (1021)
T ss_pred             EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence                                                                                            


Q ss_pred             ---------------------------------CCccccchhhhcc--CCCCchhHHHHHHHHHHHHHhCCCCCcCCCcc
Q 045092          159 ---------------------------------QPIVYMAPEYAKH--GYLTDKAEVCSFGIVTLEIESGRSNVICRTKE  203 (307)
Q Consensus       159 ---------------------------------~t~~y~aPE~~~~--~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~  203 (307)
                                                       +|+.|+|||++..  ..++.++|||||||+||||++|+.||..... 
T Consensus       170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~-  248 (1021)
T PTZ00266        170 AQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN-  248 (1021)
T ss_pred             ccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc-
Confidence                                             0567999999864  4588999999999999999999999953221 


Q ss_pred             CcccHHHHHHHHHHhhhhhcccccCCCc-hhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          204 DKFYLLDWLGSYLKRARKLNGASCSKFG-FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       204 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                          +.. +...+...        +.++ ...+..+.+++..|+ ..+|.+||++.|++.
T Consensus       249 ----~~q-li~~lk~~--------p~lpi~~~S~eL~dLI~~~L-~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        249 ----FSQ-LISELKRG--------PDLPIKGKSKELNILIKNLL-NLSAKERPSALQCLG  294 (1021)
T ss_pred             ----HHH-HHHHHhcC--------CCCCcCCCCHHHHHHHHHHh-cCChhHCcCHHHHhc
Confidence                111 11111111        1111 234568899999999 999999999999984

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.84  E-value=9.8e-21  Score=165.79  Aligned_cols=165  Identities=24%  Similarity=0.374  Sum_probs=119.8

Q ss_pred             cccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcH--HHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           90 FASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGN--REIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~--~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      |+..+.||+|+||.||++... +++.+|+|.+........  ....+|+.++.+++|+||+++++++.+....       
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            566789999999999999965 567899999976644332  2345699999999999999999988654110       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~  160 (260)
T PF00069_consen   81 PGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFVG  160 (260)
T ss_dssp             TTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                                                                                            


Q ss_pred             Cccccchhhhc-cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHH
Q 045092          160 PIVYMAPEYAK-HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRT  238 (307)
Q Consensus       160 t~~y~aPE~~~-~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  238 (307)
                      +..|+|||++. ...++.++||||+|+++++|++|..|+........   ............  .  ............+
T Consensus       161 ~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~---~~~~~~~~~~~~--~--~~~~~~~~~~~~l  233 (260)
T PF00069_consen  161 TPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQ---LEIIEKILKRPL--P--SSSQQSREKSEEL  233 (260)
T ss_dssp             SGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHH---HHHHHHHHHTHH--H--HHTTSHTTSHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccchhh---hhhhhhcccccc--c--ccccccchhHHHH
Confidence            77899999998 78899999999999999999999999964311111   111111111000  0  0000001112589


Q ss_pred             HHHhccccCCCCCCCCCCHHHHHH
Q 045092          239 SDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .+++..|+ +.||++||++.++++
T Consensus       234 ~~li~~~l-~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  234 RDLIKKML-SKDPEQRPSAEELLK  256 (260)
T ss_dssp             HHHHHHHS-SSSGGGSTTHHHHHT
T ss_pred             HHHHHHHc-cCChhHCcCHHHHhc
Confidence            99999999 999999999999875

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.84  E-value=5.7e-21  Score=177.16  Aligned_cols=169  Identities=15%  Similarity=0.169  Sum_probs=123.1

Q ss_pred             HHHhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-
Q 045092           84 KAATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-  158 (307)
Q Consensus        84 ~~~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-  158 (307)
                      ....++|...+.||+|+||.||++.. .+++.||+|.+...   .......+.+|+.++..++|+||+++++++.+... 
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~  118 (370)
T cd05596          39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYL  118 (370)
T ss_pred             CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            33467899999999999999999995 47889999998642   12234567899999999999999999987765411 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       119 ~lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~  198 (370)
T cd05596         119 YMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMV  198 (370)
T ss_pred             EEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcc
Confidence                                                                                            


Q ss_pred             ------CCccccchhhhcc----CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccC
Q 045092          159 ------QPIVYMAPEYAKH----GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCS  228 (307)
Q Consensus       159 ------~t~~y~aPE~~~~----~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  228 (307)
                            +|+.|+|||.+.+    +.++.++|||||||++|||++|+.||.....      ........ ...  .....+
T Consensus       199 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~------~~~~~~i~-~~~--~~~~~~  269 (370)
T cd05596         199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL------VGTYSKIM-DHK--NSLTFP  269 (370)
T ss_pred             cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH------HHHHHHHH-cCC--CcCCCC
Confidence                  0677999998864    3478999999999999999999999964321      11111111 110  001111


Q ss_pred             CCchhhHHHHHHHhccccCCCCCCC--CCCHHHHHHH
Q 045092          229 KFGFKFYRRTSDGNDQCSSSVTPTN--RPLMSFVVSM  263 (307)
Q Consensus       229 ~l~~~~~~~~~~l~~~C~~~~dP~~--RPs~~~vl~~  263 (307)
                      . ...++..+.+++..|+ ..+|.+  ||++.++++.
T Consensus       270 ~-~~~~s~~~~~li~~~L-~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         270 D-DIEISKQAKDLICAFL-TDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             C-cCCCCHHHHHHHHHHc-cChhhccCCCCHHHHhcC
Confidence            1 1134568889999999 989987  9999999764

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.84  E-value=4.5e-22  Score=171.69  Aligned_cols=158  Identities=20%  Similarity=0.305  Sum_probs=124.8

Q ss_pred             cccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---------
Q 045092           90 FASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---------  159 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---------  159 (307)
                      |++..+||+|+||.||++.+ .+|+.||||.+.-.  .+..+..+|+.+|.++..+++|++||.+......         
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA  112 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA  112 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence            56678999999999999995 48999999998644  4567899999999999999999999976543110         


Q ss_pred             -------------------------------------------------------------------------------C
Q 045092          160 -------------------------------------------------------------------------------P  160 (307)
Q Consensus       160 -------------------------------------------------------------------------------t  160 (307)
                                                                                                     |
T Consensus       113 GSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGT  192 (502)
T KOG0574|consen  113 GSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGT  192 (502)
T ss_pred             CcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccccC
Confidence                                                                                           9


Q ss_pred             ccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC--chhhHHHH
Q 045092          161 IVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF--GFKFYRRT  238 (307)
Q Consensus       161 ~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~  238 (307)
                      +.|||||++..-.|+.++||||+|++..||.-|++||....+.....+             +..-..|.+  +...+.++
T Consensus       193 PFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFM-------------IPT~PPPTF~KPE~WS~~F  259 (502)
T KOG0574|consen  193 PFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFM-------------IPTKPPPTFKKPEEWSSEF  259 (502)
T ss_pred             cccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEe-------------ccCCCCCCCCChHhhhhHH
Confidence            999999999998999999999999999999999999965443332211             111122222  22334489


Q ss_pred             HHHhccccCCCCCCCCCCHHHHHHH
Q 045092          239 SDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      -+++..|+ -.+|++|-|+.++++.
T Consensus       260 ~DFi~~CL-iK~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  260 NDFIRSCL-IKKPEERKTALRLCEH  283 (502)
T ss_pred             HHHHHHHh-cCCHHHHHHHHHHhhh
Confidence            99999999 9999999999888654

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.84  E-value=2.3e-20  Score=162.06  Aligned_cols=161  Identities=24%  Similarity=0.343  Sum_probs=123.5

Q ss_pred             CcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--------
Q 045092           89 NFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--------  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--------  159 (307)
                      +|...+.||+|++|.||++... ++..+++|++..........+.+|+..+.+++|+|++++++++......        
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   80 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS   80 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence            4677889999999999999964 7889999999766555567899999999999999999999877543100        


Q ss_pred             -------------------------------------------------------------------------------C
Q 045092          160 -------------------------------------------------------------------------------P  160 (307)
Q Consensus       160 -------------------------------------------------------------------------------t  160 (307)
                                                                                                     +
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~  160 (253)
T cd05122          81 GGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGT  160 (253)
T ss_pred             CCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccccccceecC
Confidence                                                                                           4


Q ss_pred             ccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchh--hHHHH
Q 045092          161 IVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFK--FYRRT  238 (307)
Q Consensus       161 ~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~  238 (307)
                      ..|++||++..+.++.++||||||+++++|++|+.|+......      .......       ....+.+...  ++..+
T Consensus       161 ~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~-------~~~~~~~~~~~~~~~~~  227 (253)
T cd05122         161 PYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM------KALFKIA-------TNGPPGLRNPEKWSDEF  227 (253)
T ss_pred             CcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH------HHHHHHH-------hcCCCCcCcccccCHHH
Confidence            5699999999888999999999999999999999998533211      1111110       0111112112  25688


Q ss_pred             HHHhccccCCCCCCCCCCHHHHHHH
Q 045092          239 SDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .+++..|+ +.||++||++.++++.
T Consensus       228 ~~~i~~~l-~~~p~~R~t~~~~l~~  251 (253)
T cd05122         228 KDFLKKCL-QKNPEKRPTAEQLLKH  251 (253)
T ss_pred             HHHHHHHc-cCChhhCCCHHHHhcC
Confidence            99999999 9999999999998753

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.84  E-value=1e-20  Score=171.61  Aligned_cols=153  Identities=19%  Similarity=0.188  Sum_probs=114.8

Q ss_pred             CcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCCC---------
Q 045092           94 NEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLKQ---------  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~---------  159 (307)
                      +.||+|+||.||+|... ++..||+|.++...   ......+..|..++... +|+||+++++++.+....         
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            46999999999999954 78899999986532   22345677788888765 899999999877654100         


Q ss_pred             ------------------------------------------------------------------------------Cc
Q 045092          160 ------------------------------------------------------------------------------PI  161 (307)
Q Consensus       160 ------------------------------------------------------------------------------t~  161 (307)
                                                                                                    |+
T Consensus        81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (316)
T cd05620          81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTP  160 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCCc
Confidence                                                                                          67


Q ss_pred             cccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHH
Q 045092          162 VYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDG  241 (307)
Q Consensus       162 ~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l  241 (307)
                      .|+|||++.+..++.++|||||||++|||++|+.||.....   ..+    ...+.       ...+.++...+.++.++
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~---~~~----~~~~~-------~~~~~~~~~~~~~~~~l  226 (316)
T cd05620         161 DYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE---DEL----FESIR-------VDTPHYPRWITKESKDI  226 (316)
T ss_pred             CccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH---HHH----HHHHH-------hCCCCCCCCCCHHHHHH
Confidence            89999999999999999999999999999999999964321   111    11111       11233334456688999


Q ss_pred             hccccCCCCCCCCCCHH-HHH
Q 045092          242 NDQCSSSVTPTNRPLMS-FVV  261 (307)
Q Consensus       242 ~~~C~~~~dP~~RPs~~-~vl  261 (307)
                      +..|+ +.||.+||++. ++.
T Consensus       227 i~~~l-~~dP~~R~~~~~~~~  246 (316)
T cd05620         227 LEKLF-ERDPTRRLGVVGNIR  246 (316)
T ss_pred             HHHHc-cCCHHHcCCChHHHH
Confidence            99999 99999999984 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.84  E-value=3.2e-21  Score=175.80  Aligned_cols=163  Identities=16%  Similarity=0.101  Sum_probs=119.9

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      ++|...+.||+|+||.||++.. .+++.||||.++...   ....+.+.+|+.++..++|+||+++++++.+...     
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            4788899999999999999995 478999999987532   2344578899999999999999999887755311     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~  160 (330)
T cd05601          81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNS  160 (330)
T ss_pred             CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCceee
Confidence                                                                                            


Q ss_pred             ----CCccccchhhhc------cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccC
Q 045092          159 ----QPIVYMAPEYAK------HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCS  228 (307)
Q Consensus       159 ----~t~~y~aPE~~~------~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  228 (307)
                          +|+.|+|||++.      .+.++.++|||||||++|||++|+.||.....      ..........    ......
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~------~~~~~~i~~~----~~~~~~  230 (330)
T cd05601         161 KLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS------AKTYNNIMNF----QRFLKF  230 (330)
T ss_pred             ecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH------HHHHHHHHcC----CCccCC
Confidence                066799999986      45688999999999999999999999953321      1111111111    111111


Q ss_pred             CCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          229 KFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       229 ~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ......+..+.+++..|+ . +|.+||++.+++.
T Consensus       231 ~~~~~~~~~~~~li~~ll-~-~p~~R~t~~~l~~  262 (330)
T cd05601         231 PEDPKVSSDFLDLIQSLL-C-GQKERLGYEGLCC  262 (330)
T ss_pred             CCCCCCCHHHHHHHHHHc-c-ChhhCCCHHHHhC
Confidence            111234557888888999 8 9999999999875

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.84  E-value=1.6e-20  Score=171.24  Aligned_cols=181  Identities=14%  Similarity=0.182  Sum_probs=125.0

Q ss_pred             HHHHHhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC
Q 045092           82 QIKAATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK  158 (307)
Q Consensus        82 el~~~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  158 (307)
                      ++...+++|...+.||+|+||.||++.. .+++.||||++...  .....+.+.+|+.++.+++||||+++++++.....
T Consensus         4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~   83 (328)
T cd07856           4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE   83 (328)
T ss_pred             ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence            3445688999999999999999999984 47899999987542  22334678899999999999999999998754211


Q ss_pred             C-------------------------------------------------------------------------------
Q 045092          159 Q-------------------------------------------------------------------------------  159 (307)
Q Consensus       159 ~-------------------------------------------------------------------------------  159 (307)
                      .                                                                               
T Consensus        84 ~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~  163 (328)
T cd07856          84 DIYFVTELLGTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMT  163 (328)
T ss_pred             cEEEEeehhccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCCcC
Confidence            0                                                                               


Q ss_pred             ----Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcc-cHHH--------HHHHHHHhhh-hhc-
Q 045092          160 ----PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKF-YLLD--------WLGSYLKRAR-KLN-  223 (307)
Q Consensus       160 ----t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~-~l~~--------~~~~~~~~~~-~~~-  223 (307)
                          +..|+|||++.+ ..++.++||||||+++++|++|+.||......... .+.+        +......... .+. 
T Consensus       164 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (328)
T cd07856         164 GYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQ  243 (328)
T ss_pred             CCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHh
Confidence                557999998766 46899999999999999999999998543221100 0000        0000000000 000 


Q ss_pred             ccc-cCC-----CchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          224 GAS-CSK-----FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       224 ~~~-~~~-----l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ... ...     .....+..+.+++.+|+ +.+|++||++.+++..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l-~~~P~~R~t~~ell~~  288 (328)
T cd07856         244 SLPKREPVPFSEKFKNADPSAIDLLEKML-VFDPQKRISAAEALAH  288 (328)
T ss_pred             hccccCCCcHHHHcCCCCHHHHHHHHHHc-CCChhhCCCHHHHhcC
Confidence            000 000     01123457899999999 9999999999998654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.83  E-value=1.8e-20  Score=170.25  Aligned_cols=168  Identities=18%  Similarity=0.236  Sum_probs=125.3

Q ss_pred             HHHhcCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCCChh--------------cHHHHHHHHHHHhhCCCCCccc
Q 045092           84 KAATNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQ--------------GNREIVNEIGMISALQHPNLVK  148 (307)
Q Consensus        84 ~~~t~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~--------------~~~~~~~E~~~l~~l~h~niv~  148 (307)
                      ....|.|.+.+.||+|.||.|-+|+ ..+++.||||++.+....              ..+...+||.+|++++|+|||+
T Consensus        93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~  172 (576)
T KOG0585|consen   93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK  172 (576)
T ss_pred             ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence            4456889999999999999999999 447899999999643211              1357899999999999999999


Q ss_pred             eeeeeecCCCC---------------------------------------------------------------------
Q 045092          149 LYRLCTETLKQ---------------------------------------------------------------------  159 (307)
Q Consensus       149 l~g~~~~~~~~---------------------------------------------------------------------  159 (307)
                      |+++..++...                                                                     
T Consensus       173 LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIs  252 (576)
T KOG0585|consen  173 LIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKIS  252 (576)
T ss_pred             EEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEee
Confidence            99876554111                                                                     


Q ss_pred             -------------------------CccccchhhhccCC----CCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHH
Q 045092          160 -------------------------PIVYMAPEYAKHGY----LTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLD  210 (307)
Q Consensus       160 -------------------------t~~y~aPE~~~~~~----~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~  210 (307)
                                               |+.|||||.+.+|.    .+.+.||||+||+||.|+.|+.||....   ...+. 
T Consensus       253 DFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~---~~~l~-  328 (576)
T KOG0585|consen  253 DFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF---ELELF-  328 (576)
T ss_pred             ccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch---HHHHH-
Confidence                                     99999999998743    3567999999999999999999995322   11111 


Q ss_pred             HHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHh
Q 045092          211 WLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSML  264 (307)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L  264 (307)
                         ..+..    ..+.-|. ..+....+.+++.+.+ ..||+.|.+..+|....
T Consensus       329 ---~KIvn----~pL~fP~-~pe~~e~~kDli~~lL-~KdP~~Ri~l~~ik~Hp  373 (576)
T KOG0585|consen  329 ---DKIVN----DPLEFPE-NPEINEDLKDLIKRLL-EKDPEQRITLPDIKLHP  373 (576)
T ss_pred             ---HHHhc----CcccCCC-cccccHHHHHHHHHHh-hcChhheeehhhheecc
Confidence               11111    1111121 2234558889999999 99999999999886543

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.83  E-value=2.1e-21  Score=176.83  Aligned_cols=155  Identities=17%  Similarity=0.169  Sum_probs=118.7

Q ss_pred             CcccCCCCeeEEEEEE-cCCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----------
Q 045092           94 NEISERGFGPVYRGLL-ADGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----------  158 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----------  158 (307)
                      +.||+|+||.||++.. .+++.||+|.+...   .......+.+|++++..++|+||+++++++.....           
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            4699999999999984 47899999998643   22334567889999999999999999887654310           


Q ss_pred             -----------------------------------------------------------------------------CCc
Q 045092          159 -----------------------------------------------------------------------------QPI  161 (307)
Q Consensus       159 -----------------------------------------------------------------------------~t~  161 (307)
                                                                                                   +|+
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~  160 (325)
T cd05594          81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTP  160 (325)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCCc
Confidence                                                                                         067


Q ss_pred             cccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHH
Q 045092          162 VYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDG  241 (307)
Q Consensus       162 ~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l  241 (307)
                      .|+|||++.++.++.++|||||||++|||++|+.||......      . ....+.       .....++..++..+.++
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~------~-~~~~i~-------~~~~~~p~~~~~~~~~l  226 (325)
T cd05594         161 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------K-LFELIL-------MEEIRFPRTLSPEAKSL  226 (325)
T ss_pred             ccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH------H-HHHHHh-------cCCCCCCCCCCHHHHHH
Confidence            899999999999999999999999999999999999543211      1 111111       11223344566688999


Q ss_pred             hccccCCCCCCCCC-----CHHHHHHH
Q 045092          242 NDQCSSSVTPTNRP-----LMSFVVSM  263 (307)
Q Consensus       242 ~~~C~~~~dP~~RP-----s~~~vl~~  263 (307)
                      +..|+ +.||++|+     ++.++++.
T Consensus       227 i~~~L-~~dP~~R~~~~~~~~~~il~h  252 (325)
T cd05594         227 LSGLL-KKDPKQRLGGGPDDAKEIMQH  252 (325)
T ss_pred             HHHHh-hcCHHHhCCCCCCCHHHHhcC
Confidence            99999 99999996     88888754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.83  E-value=1.1e-20  Score=177.46  Aligned_cols=161  Identities=17%  Similarity=0.229  Sum_probs=127.5

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCCh---hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSK---QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      .-|++++.||.|+-|.|-+|+. .+|+.+|||++.....   .....+.+||-+|+-+.|||+++||+++......    
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl   91 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL   91 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence            3478899999999999999994 5899999999976522   2234678899999999999999999987654111    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        92 Eyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeTS  171 (786)
T KOG0588|consen   92 EYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLETS  171 (786)
T ss_pred             EecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCCcccccc
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCCCC-chhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 --PIVYMAPEYAKHGYLT-DKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 --t~~y~aPE~~~~~~~~-~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                        .+.|.+||.+.+..|. .++||||.|||||.|+||+.||+..+      + +.+...++.|.       -.++...+.
T Consensus       172 CGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN------i-r~LLlKV~~G~-------f~MPs~Is~  237 (786)
T KOG0588|consen  172 CGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN------I-RVLLLKVQRGV-------FEMPSNISS  237 (786)
T ss_pred             CCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc------H-HHHHHHHHcCc-------ccCCCcCCH
Confidence              8899999999998875 68999999999999999999996322      2 22233333332       223355667


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      +..+++.+++ ..||++|.|+.+|+++
T Consensus       238 eaQdLLr~ml-~VDp~~RiT~~eI~kH  263 (786)
T KOG0588|consen  238 EAQDLLRRML-DVDPSTRITTEEILKH  263 (786)
T ss_pred             HHHHHHHHHh-ccCccccccHHHHhhC
Confidence            8899999999 9999999999999874

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=4.6e-20  Score=162.59  Aligned_cols=161  Identities=17%  Similarity=0.200  Sum_probs=122.9

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC-----ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK-----SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      .+|...+.||+|+||.||+|.. .++..||+|.+...     ..+....+.+|++++++++|+||+++++++.+....  
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            4788899999999999999994 47899999987432     123345789999999999999999999887543110  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~  161 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM  161 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccc
Confidence                                                                                            


Q ss_pred             ----------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC
Q 045092          160 ----------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK  229 (307)
Q Consensus       160 ----------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  229 (307)
                                +..|+|||++.+..++.++|||||||+++||++|+.||.....     ... +...      ......+.
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~-~~~~------~~~~~~~~  229 (264)
T cd06653         162 SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA-----MAA-IFKI------ATQPTKPM  229 (264)
T ss_pred             cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH-----HHH-HHHH------HcCCCCCC
Confidence                      4569999999888899999999999999999999999853211     111 1111      11222344


Q ss_pred             CchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          230 FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       230 l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ++......+.+++.+|+ . +|..||+..+++.
T Consensus       230 ~p~~~~~~~~~~i~~~l-~-~~~~r~~~~~~~~  260 (264)
T cd06653         230 LPDGVSDACRDFLKQIF-V-EEKRRPTAEFLLR  260 (264)
T ss_pred             CCcccCHHHHHHHHHHh-c-CcccCccHHHHhc
Confidence            55666778999999999 7 6799999998765

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.83  E-value=3.5e-20  Score=167.82  Aligned_cols=161  Identities=22%  Similarity=0.312  Sum_probs=118.4

Q ss_pred             cccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           90 FASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      |...+.||+|+||.||+|.. .++..||+|.+....   ......+.+|+.++.+++|+|++++++++.+....      
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            55567899999999999995 478899999986432   22345688999999999999999999987654110      


Q ss_pred             -----------------------------------------------------------------------------Ccc
Q 045092          160 -----------------------------------------------------------------------------PIV  162 (307)
Q Consensus       160 -----------------------------------------------------------------------------t~~  162 (307)
                                                                                                   +..
T Consensus       103 ~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~  182 (313)
T cd06633         103 CLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTPY  182 (313)
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCcccccc
Confidence                                                                                         567


Q ss_pred             ccchhhhc---cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHH
Q 045092          163 YMAPEYAK---HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTS  239 (307)
Q Consensus       163 y~aPE~~~---~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  239 (307)
                      |+|||++.   .+.++.++|||||||+++||++|+.|+......      .........      .........++..+.
T Consensus       183 y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~------~~~~~~~~~------~~~~~~~~~~~~~l~  250 (313)
T cd06633         183 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------SALYHIAQN------DSPTLQSNEWTDSFR  250 (313)
T ss_pred             ccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHHhc------CCCCCCccccCHHHH
Confidence            99999874   467889999999999999999999998543211      111111110      011111223445788


Q ss_pred             HHhccccCCCCCCCCCCHHHHHHH
Q 045092          240 DGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       240 ~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      +++.+|+ +.+|.+||++.+++..
T Consensus       251 ~li~~~l-~~~P~~Rp~~~~~l~~  273 (313)
T cd06633         251 GFVDYCL-QKIPQERPASAELLRH  273 (313)
T ss_pred             HHHHHHc-cCChhhCcCHHHHhcC
Confidence            9999999 9999999999999853

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.83  E-value=1.7e-20  Score=171.97  Aligned_cols=172  Identities=16%  Similarity=0.171  Sum_probs=119.6

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC--------
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK--------  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~--------  158 (307)
                      .+|...+.||.|+||.||+|.. .++..||+|.+........+.+.+|++++++++|+||+++++++.....        
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS   84 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence            6788899999999999999994 4789999999876655556788999999999999999998864322100        


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        85 ~~~~~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~  164 (342)
T cd07854          85 LTELNSVYIVQEYMETDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARI  164 (342)
T ss_pred             ccccceEEEEeecccccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCccccee
Confidence                                                                                            


Q ss_pred             ---------------CCccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHH---------
Q 045092          159 ---------------QPIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLG---------  213 (307)
Q Consensus       159 ---------------~t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~---------  213 (307)
                                     .+..|+|||.+.. ..++.++|||||||++|||++|+.||........  +.....         
T Consensus       165 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~  242 (342)
T cd07854         165 VDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQ--MQLILESVPVVREED  242 (342)
T ss_pred             cCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcCCCChHH
Confidence                           0346999998754 4578899999999999999999999964322110  000000         


Q ss_pred             --HHHHhh-hhhc-ccccCC-----CchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          214 --SYLKRA-RKLN-GASCSK-----FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       214 --~~~~~~-~~~~-~~~~~~-----l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                        ...... .... ....+.     +....+.++.+++..|+ +.||.+||++.+++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L-~~dP~~R~t~~ell~  299 (342)
T cd07854         243 RNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQIL-TFNPMDRLTAEEALM  299 (342)
T ss_pred             hhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHh-CCCchhccCHHHHhC
Confidence              000000 0000 000000     01123457889999999 999999999999975

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.83  E-value=8.6e-20  Score=168.02  Aligned_cols=176  Identities=15%  Similarity=0.148  Sum_probs=122.7

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC----
Q 045092           86 ATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK----  158 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~----  158 (307)
                      ..++|+..+.||+|+||.||++.. .+++.||||.+...  .......+.+|+.++.+++|+||+++++++.....    
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            357899999999999999999994 47899999998642  23344578889999999999999999887642210    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        94 ~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~  173 (353)
T cd07850          94 QDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM  173 (353)
T ss_pred             CcEEEEEeccCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCCC
Confidence                                                                                            


Q ss_pred             -----CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCc------------ccHHHHHH----HHHH
Q 045092          159 -----QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDK------------FYLLDWLG----SYLK  217 (307)
Q Consensus       159 -----~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~------------~~l~~~~~----~~~~  217 (307)
                           .+..|+|||.+.+..++.++|||||||++++|++|+.||...+....            ..+.+.+.    ....
T Consensus       174 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (353)
T cd07850         174 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVE  253 (353)
T ss_pred             CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhh
Confidence                 05579999999998999999999999999999999999854321100            00000000    0000


Q ss_pred             hhh-----hhccccc----CCC----chhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          218 RAR-----KLNGASC----SKF----GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       218 ~~~-----~~~~~~~----~~l----~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ...     .+.....    +..    ....+..+.+++.+|+ +.||++||++.+++.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L-~~dP~~R~t~~eiL~  310 (353)
T cd07850         254 NRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKML-VIDPEKRISVDDALQ  310 (353)
T ss_pred             cCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHc-CCChhhCcCHHHHhc
Confidence            000     0000000    000    1123446789999999 999999999999985

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.83  E-value=2.4e-20  Score=167.30  Aligned_cols=157  Identities=19%  Similarity=0.244  Sum_probs=118.4

Q ss_pred             CcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------------
Q 045092           94 NEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------------  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------------  159 (307)
                      ..||+|+||.||++.. .++..||||.+..........+.+|+.+++.++|+||+++++++......             
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  105 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT  105 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence            6799999999999985 47899999998655545556799999999999999999999877653110             


Q ss_pred             -------------------------------------------------------------------------Cccccch
Q 045092          160 -------------------------------------------------------------------------PIVYMAP  166 (307)
Q Consensus       160 -------------------------------------------------------------------------t~~y~aP  166 (307)
                                                                                               +..|+||
T Consensus       106 ~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~p  185 (292)
T cd06657         106 DIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAP  185 (292)
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCccccCH
Confidence                                                                                     5669999


Q ss_pred             hhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhcccc
Q 045092          167 EYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCS  246 (307)
Q Consensus       167 E~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~  246 (307)
                      |++.++.++.++||||||+++++|++|+.||......      .... .+...  ..... .. ....+..+.+++.+|+
T Consensus       186 E~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~------~~~~-~~~~~--~~~~~-~~-~~~~~~~l~~li~~~l  254 (292)
T cd06657         186 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL------KAMK-MIRDN--LPPKL-KN-LHKVSPSLKGFLDRLL  254 (292)
T ss_pred             HHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHH-HHHhh--CCccc-CC-cccCCHHHHHHHHHHH
Confidence            9998888999999999999999999999998532211      1111 11110  11000 01 1234457888999999


Q ss_pred             CCCCCCCCCCHHHHHH
Q 045092          247 SSVTPTNRPLMSFVVS  262 (307)
Q Consensus       247 ~~~dP~~RPs~~~vl~  262 (307)
                       +.+|.+||++.+++.
T Consensus       255 -~~~P~~R~~~~~ll~  269 (292)
T cd06657         255 -VRDPAQRATAAELLK  269 (292)
T ss_pred             -hCCcccCcCHHHHhc
Confidence             999999999999876

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.83  E-value=2.1e-20  Score=168.13  Aligned_cols=172  Identities=15%  Similarity=0.226  Sum_probs=117.5

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      .++|+..+.||+|+||.||++... +++.||||.+....  ......+.+|++++++++|+||++++++|......    
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   90 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY   90 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence            457899999999999999999954 78999999886432  22234567899999999999999999876432100    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        91 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~  170 (310)
T cd07865          91 KGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFS  170 (310)
T ss_pred             CceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCccccc
Confidence                                                                                            


Q ss_pred             ---------------CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHh-----
Q 045092          160 ---------------PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKR-----  218 (307)
Q Consensus       160 ---------------t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~-----  218 (307)
                                     +..|+|||++.+. .++.++||||||++++||++|+.|+........   ...+......     
T Consensus       171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  247 (310)
T cd07865         171 LSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQ---LTLISQLCGSITPEV  247 (310)
T ss_pred             CCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCChhh
Confidence                           2459999988764 378899999999999999999999864332111   1111111100     


Q ss_pred             ---hhh--------hcc----cccCCCc-hhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          219 ---ARK--------LNG----ASCSKFG-FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       219 ---~~~--------~~~----~~~~~l~-~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                         ...        ...    .....+. ......+.+++..|+ ..||.+||++.++++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l-~~~P~~R~t~~e~l~  306 (310)
T cd07865         248 WPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLL-VLDPAKRIDADTALN  306 (310)
T ss_pred             cccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHh-cCChhhccCHHHHhc
Confidence               000        000    0000000 011235678999999 999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.83  E-value=4.2e-20  Score=165.26  Aligned_cols=160  Identities=19%  Similarity=0.228  Sum_probs=122.0

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      ++|...+.||+|+||.||++... +++.||+|.+....   ....+.+.+|++++++++|+||+++++++.+....    
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            47888899999999999999954 68999999986432   23346789999999999999999999887654110    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~  160 (290)
T cd05580          81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCG  160 (290)
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCCCC
Confidence                                                                                            


Q ss_pred             CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHH
Q 045092          160 PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTS  239 (307)
Q Consensus       160 t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  239 (307)
                      ++.|+|||.+.++..+.++||||||+++++|++|+.||.....      .. .......+       ...++...+..+.
T Consensus       161 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~-~~~~~~~~-------~~~~~~~~~~~l~  226 (290)
T cd05580         161 TPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP------IQ-IYEKILEG-------KVRFPSFFSPDAK  226 (290)
T ss_pred             CccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH------HH-HHHHHhcC-------CccCCccCCHHHH
Confidence            5679999999888889999999999999999999999853321      01 11111111       1223344566889


Q ss_pred             HHhccccCCCCCCCCC-----CHHHHHH
Q 045092          240 DGNDQCSSSVTPTNRP-----LMSFVVS  262 (307)
Q Consensus       240 ~l~~~C~~~~dP~~RP-----s~~~vl~  262 (307)
                      +++..|+ ..||.+||     ++.++++
T Consensus       227 ~li~~~l-~~~p~~R~~~~~~~~~~l~~  253 (290)
T cd05580         227 DLIRNLL-QVDLTKRLGNLKNGVNDIKN  253 (290)
T ss_pred             HHHHHHc-cCCHHHccCcccCCHHHHHc
Confidence            9999999 99999999     6666653

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.83  E-value=3.3e-20  Score=162.12  Aligned_cols=161  Identities=20%  Similarity=0.295  Sum_probs=123.5

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-------
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-------  158 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-------  158 (307)
                      +|+..+.||+|+||.||++.. .+++.+|+|.+...  .......+.+|++++++++|+||+++++++.+...       
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            477889999999999999984 47889999998643  23334578899999999999999999877654310       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~  160 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKT  160 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCccc
Confidence                                                                                            


Q ss_pred             --CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          159 --QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       159 --~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                        .+..|++||++.+..++.++|+||||++++||++|+.|+......      . ....      +....-+.+...++.
T Consensus       161 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~------~-~~~~------~~~~~~~~~~~~~~~  227 (256)
T cd08530         161 QIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ------D-LRYK------VQRGKYPPIPPIYSQ  227 (256)
T ss_pred             ccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------H-HHHH------HhcCCCCCCchhhCH
Confidence              056799999999888999999999999999999999999643211      1 1111      111222233345666


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .+.+++..|+ ..+|++||++.++++.
T Consensus       228 ~~~~li~~~l-~~~p~~Rp~~~~~l~~  253 (256)
T cd08530         228 DLQNFIRSML-QVKPKLRPNCDKILAS  253 (256)
T ss_pred             HHHHHHHHHc-CCCcccCCCHHHHhcC
Confidence            8999999999 9999999999998753

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.83  E-value=2.3e-20  Score=170.49  Aligned_cols=173  Identities=16%  Similarity=0.193  Sum_probs=121.2

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      .++|+..+.||+|+||.||+|.. .++..||+|++....  ......+.+|+.++.+++|+||+++++++.....     
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   83 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV   83 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence            47889899999999999999994 478999999987532  2335678889999999999999998876542110     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        84 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~  163 (334)
T cd07855          84 YVVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTE  163 (334)
T ss_pred             EEEEehhhhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcC
Confidence                                                                                            


Q ss_pred             ---------CCccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCccc------------HHH-----H
Q 045092          159 ---------QPIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFY------------LLD-----W  211 (307)
Q Consensus       159 ---------~t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~------------l~~-----~  211 (307)
                               .+..|+|||.+.+ ..++.++|||||||++|||++|+.||..........            +.+     .
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  243 (334)
T cd07855         164 HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDR  243 (334)
T ss_pred             CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhh
Confidence                     0446999998765 468899999999999999999999996432211000            000     0


Q ss_pred             HHHHHHhhhhhcccccC---CCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          212 LGSYLKRARKLNGASCS---KFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       212 ~~~~~~~~~~~~~~~~~---~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      +...+..   .......   .+....+..+.+++..|+ +.+|.+||++.+++..
T Consensus       244 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~~l-~~~P~~Rpt~~~~l~~  294 (334)
T cd07855         244 VRKYIQN---LPRKQPVPWSKIFPKASPEALDLLSQML-QFDPEERITVEQALQH  294 (334)
T ss_pred             HHHHHhh---cccCCCCCHHHHcccCCHHHHHHHHHHc-cCChhhCcCHHHHHhC
Confidence            0000000   0000000   011223558999999999 9999999999998763

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.83  E-value=4.7e-20  Score=167.50  Aligned_cols=192  Identities=17%  Similarity=0.201  Sum_probs=127.9

Q ss_pred             cCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhh--CCCCCccceeeeeecCCCC------
Q 045092           88 NNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISA--LQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~g~~~~~~~~------  159 (307)
                      .+......||+|.||.||+|.+. ++.||||++.   .+....|.+|-++..-  +.|+||++++++-......      
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp---~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL  285 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFP---EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL  285 (534)
T ss_pred             CchhhHHHhhcCccceeehhhcc-CceeEEEecC---HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence            34455678999999999999985 5899999994   3445678888887765  4899999999865433100      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       286 Vt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~  365 (534)
T KOG3653|consen  286 VTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALR  365 (534)
T ss_pred             EeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEE
Confidence                                                                                            


Q ss_pred             ---------------CccccchhhhccCC-C-----CchhHHHHHHHHHHHHHhCCCCCcC-CCccCccc---------H
Q 045092          160 ---------------PIVYMAPEYAKHGY-L-----TDKAEVCSFGIVTLEIESGRSNVIC-RTKEDKFY---------L  208 (307)
Q Consensus       160 ---------------t~~y~aPE~~~~~~-~-----~~~sDV~s~Gvvl~elltg~~p~~~-~~~~~~~~---------l  208 (307)
                                     |..|||||++.+.. +     -.+.||||+|.|||||++.-.-++. ..+.-...         -
T Consensus       366 ~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt  445 (534)
T KOG3653|consen  366 LEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPT  445 (534)
T ss_pred             ecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCC
Confidence                           99999999987532 2     2468999999999999996544421 00000000         0


Q ss_pred             HHHHHHHHHhhhhhcccccCCCchh-----hHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccccccc--cCeeeeeee
Q 045092          209 LDWLGSYLKRARKLNGASCSKFGFK-----FYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAEVCS--FGIVTLEIE  281 (307)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~v~~--~g~~~~e~~  281 (307)
                      .+.++..+     +.....|.++..     ....+.+.+..|| ..||+.|-|+.=|.+.+......+.  .|-.+....
T Consensus       446 ~e~mq~~V-----V~kK~RP~~p~~W~~h~~~~~l~et~EeCW-DhDaeARLTA~Cv~eR~~~l~~~~~~~~~~s~~~~~  519 (534)
T KOG3653|consen  446 LEEMQELV-----VRKKQRPKIPDAWRKHAGMAVLCETIEECW-DHDAEARLTAGCVEERMAELMMLWEDSSGESSSSLV  519 (534)
T ss_pred             HHHHHHHH-----HhhccCCCChhhhhcCccHHHHHHHHHHHc-CCchhhhhhhHHHHHHHHHHhccCCccCCccccccC
Confidence            11122222     222223333332     2237888999999 9999999999888877776665554  555555666


Q ss_pred             ccCCceee
Q 045092          282 SGRSNVIC  289 (307)
Q Consensus       282 t~~~~~~~  289 (307)
                      +...+++.
T Consensus       520 ~~~~~~~~  527 (534)
T KOG3653|consen  520 TPVDVVTA  527 (534)
T ss_pred             CCCccccC
Confidence            65555433

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.83  E-value=6.5e-20  Score=162.17  Aligned_cols=162  Identities=20%  Similarity=0.280  Sum_probs=115.6

Q ss_pred             CcccCCCCeeEEEEEEcCC---CEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----------
Q 045092           94 NEISERGFGPVYRGLLADG---KVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----------  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~~~~---~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----------  159 (307)
                      +.||+|+||.||+|...++   ..+++|.+.... ....+.|.+|+.++..++||||++++++|......          
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   80 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG   80 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence            3699999999999984333   346677765432 33456899999999999999999999987654111          


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~  160 (268)
T cd05086          81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDD  160 (268)
T ss_pred             cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccC
Confidence                                                                                            


Q ss_pred             ---Cccccchhhhcc-------CCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccC
Q 045092          160 ---PIVYMAPEYAKH-------GYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCS  228 (307)
Q Consensus       160 ---t~~y~aPE~~~~-------~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  228 (307)
                         +..|+|||++..       ..++.++|||||||++|||++ |..|+.....      .+.....+...  .....++
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~------~~~~~~~~~~~--~~~~~~~  232 (268)
T cd05086         161 KCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD------REVLNHVIKDQ--QVKLFKP  232 (268)
T ss_pred             CcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHhhc--ccccCCC
Confidence               357999998753       235778999999999999997 5667743221      12222222221  2334455


Q ss_pred             CCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhc
Q 045092          229 KFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLE  265 (307)
Q Consensus       229 ~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~  265 (307)
                      .+...+...+.+++..|| . +|++||++.+|++.|.
T Consensus       233 ~~~~~~~~~~~~l~~~c~-~-~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         233 QLELPYSERWYEVLQFCW-L-SPEKRATAEEVHRLLT  267 (268)
T ss_pred             ccCCCCcHHHHHHHHHHh-h-CcccCCCHHHHHHHhc
Confidence            555556778888999999 5 6999999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.83  E-value=2.3e-20  Score=165.76  Aligned_cols=169  Identities=18%  Similarity=0.236  Sum_probs=118.7

Q ss_pred             cccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecC--CCC-----
Q 045092           90 FASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTET--LKQ-----  159 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~-----  159 (307)
                      |+..+.||+|+||.||+|... +++.+|+|.+....  ......+.+|+.++++++|+|++++++++...  ...     
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            566789999999999999954 68899999997653  33345788999999999999999999988755  100     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~  160 (287)
T cd07840          81 YMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTN  160 (287)
T ss_pred             cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccc
Confidence                                                                                            


Q ss_pred             ---Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhh---------------
Q 045092          160 ---PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRAR---------------  220 (307)
Q Consensus       160 ---t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~---------------  220 (307)
                         +..|+|||.+.+ ..++.++||||||++++||++|+.||.......   ....+........               
T Consensus       161 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (287)
T cd07840         161 RVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELE---QLEKIFELCGSPTDENWPGVSKLPWFEN  237 (287)
T ss_pred             cccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCCchhhccccccchhhhh
Confidence               456999997764 457899999999999999999999986433211   1111111000000               


Q ss_pred             -----hhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          221 -----KLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       221 -----~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                           .........+...++..+.+++..|+ ..+|.+||++.+++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l-~~~P~~Rp~~~~~l~  283 (287)
T cd07840         238 LKPKKPYKRRLREFFKHLIDPSALDLLDKLL-TLDPKKRISADQALQ  283 (287)
T ss_pred             ccccccchhHHHHHhcccCCHHHHHHHHHHc-CCChhhCcCHHHHhh
Confidence                 00000000011112457889999999 999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.83  E-value=3.1e-20  Score=166.31  Aligned_cols=171  Identities=16%  Similarity=0.210  Sum_probs=120.5

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh--hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK--QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      ++|+..+.||+|++|.||+|... +++.||+|.+.....  ...+.+.+|++++++++|+||+++++++.+....     
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            57888999999999999999954 788999999864322  2345788999999999999999999987653100     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        82 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~  161 (294)
T PLN00009         82 YLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFT  161 (294)
T ss_pred             cccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCccccc
Confidence                                                                                            


Q ss_pred             ----CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhh---------------
Q 045092          160 ----PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRA---------------  219 (307)
Q Consensus       160 ----t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~---------------  219 (307)
                          ++.|+|||++.++ .++.++|||||||++++|++|+.||......+  .+.. ....+...               
T Consensus       162 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~  238 (294)
T PLN00009        162 HEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEID--ELFK-IFRILGTPNEETWPGVTSLPDYK  238 (294)
T ss_pred             cCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHH-HHHHhCCCChhhccccccchhhh
Confidence                3569999988764 57899999999999999999999996432211  0100 00000000               


Q ss_pred             hhhcccccCC---CchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          220 RKLNGASCSK---FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       220 ~~~~~~~~~~---l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ..........   .....+.++.+++.+|+ +.+|++||++.++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l-~~~P~~Rps~~~~l~  283 (294)
T PLN00009        239 SAFPKWPPKDLATVVPTLEPAGVDLLSKML-RLDPSKRITARAALE  283 (294)
T ss_pred             hhcccCCCCCHHHhCcCCChHHHHHHHHHc-cCChhhCcCHHHHhc
Confidence            0000000000   01123447889999999 999999999999986

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.83  E-value=1e-19  Score=163.43  Aligned_cols=98  Identities=9%  Similarity=0.050  Sum_probs=69.2

Q ss_pred             CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC-CchhhHHHH
Q 045092          160 PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK-FGFKFYRRT  238 (307)
Q Consensus       160 t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~  238 (307)
                      |+.|+|||+..+..++.++|||||||+++||++|+.||.......  .+.......+     +....... .....+..+
T Consensus       196 t~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~  268 (294)
T PHA02882        196 TLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG--NLIHAAKCDF-----IKRLHEGKIKIKNANKFI  268 (294)
T ss_pred             CccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccch--HHHHHhHHHH-----HHHhhhhhhccCCCCHHH
Confidence            678999999999999999999999999999999999996442211  1111111000     00000011 012335688


Q ss_pred             HHHhccccCCCCCCCCCCHHHHHHHhc
Q 045092          239 SDGNDQCSSSVTPTNRPLMSFVVSMLE  265 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RPs~~~vl~~L~  265 (307)
                      .+++..|+ ..+|++||++.++.+.|+
T Consensus       269 ~~~~~~~~-~~~~~~rp~~~~l~~~~~  294 (294)
T PHA02882        269 YDFIECVT-KLSYEEKPDYDALIKIFD  294 (294)
T ss_pred             HHHHHHHH-hCCCCCCCCHHHHHHhhC
Confidence            99999999 999999999999998763

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.83  E-value=1.5e-20  Score=172.07  Aligned_cols=173  Identities=14%  Similarity=0.195  Sum_probs=120.9

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      .+.|...+.||+|+||.||++.. .++..||||.+...  .......+.+|+.++..++|+||+++++++.....     
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence            45788899999999999999994 47899999998643  23334567889999999999999999876542210     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        84 ~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~  163 (337)
T cd07858          84 VYIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGD  163 (337)
T ss_pred             EEEEEeCCCCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCcc
Confidence                                                                                            


Q ss_pred             ------CCccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHH-----------hhh
Q 045092          159 ------QPIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLK-----------RAR  220 (307)
Q Consensus       159 ------~t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~-----------~~~  220 (307)
                            .+..|+|||.+.+ ..++.++|||||||++++|++|+.||........   .........           ...
T Consensus       164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  240 (337)
T cd07858         164 FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQ---LKLITELLGSPSEEDLGFIRNEK  240 (337)
T ss_pred             cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHH---HHHHHHHhCCCChHHhhhcCchh
Confidence                  0456999998865 4688999999999999999999999854321110   000000000           000


Q ss_pred             ------hhcccccCCC---chhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          221 ------KLNGASCSKF---GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       221 ------~~~~~~~~~l---~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                            .......+.+   ...++.++.+++.+|+ +.+|++||++.++++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l-~~~P~~Rps~~ell~h  291 (337)
T cd07858         241 ARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKML-VFDPSKRITVEEALAH  291 (337)
T ss_pred             hhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHh-cCChhhccCHHHHHcC
Confidence                  0000111111   1234557899999999 9999999999999875

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.83  E-value=3.6e-20  Score=165.49  Aligned_cols=173  Identities=13%  Similarity=0.191  Sum_probs=118.9

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh-hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK-QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      .++|+..+.||+|+||.||+|... +++.||||.+..... .....+.+|++++++++|+||+++++++.+....     
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE   83 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence            367888999999999999999954 789999999864422 2234678899999999999999999987654110     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  163 (291)
T cd07844          84 YLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNE  163 (291)
T ss_pred             cCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCcccccc
Confidence                                                                                            


Q ss_pred             --Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHh--------hhh---hcc-
Q 045092          160 --PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKR--------ARK---LNG-  224 (307)
Q Consensus       160 --t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~--------~~~---~~~-  224 (307)
                        +..|+|||++.+ ..++.++||||||+++|||++|+.||.......  .........+..        ...   ... 
T Consensus       164 ~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (291)
T cd07844         164 VVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVE--DQLHKIFRVLGTPTEETWPGVSSNPEFKPY  241 (291)
T ss_pred             ccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHH--HHHHHHHHhcCCCChhhhhhhhhccccccc
Confidence              456999998875 458899999999999999999999995432110  000000000000        000   000 


Q ss_pred             ---cc-cCCCc---hhhH--HHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          225 ---AS-CSKFG---FKFY--RRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       225 ---~~-~~~l~---~~~~--~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                         .. ...+.   ....  ....+++..|+ +.+|.+||++.+++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L-~~~p~~Rps~~e~l~  287 (291)
T cd07844         242 SFPFYPPRPLINHAPRLDRIPHGEELALKFL-QYEPKKRISAAEAMK  287 (291)
T ss_pred             cccccCChhHHHhCcCCCCchhHHHHHHHHh-ccCcccccCHHHHhc
Confidence               00 00000   0111  46778999999 999999999999865

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.83  E-value=5.5e-20  Score=170.06  Aligned_cols=165  Identities=17%  Similarity=0.160  Sum_probs=115.1

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      ++|+..+.||+|+||.||++.. .+++.||||++....   ......+.+|+.++.+++|+||+++++.+.+...     
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            4788899999999999999984 478999999986432   2234568899999999999999999987765410     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~  160 (363)
T cd05628          81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFY  160 (363)
T ss_pred             cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccc
Confidence                                                                                            


Q ss_pred             -------------------------------------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCC
Q 045092          159 -------------------------------------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRT  201 (307)
Q Consensus       159 -------------------------------------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~  201 (307)
                                                           +|+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~  240 (363)
T cd05628         161 RNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET  240 (363)
T ss_pred             ccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCC
Confidence                                                 1246999999999899999999999999999999999996432


Q ss_pred             ccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhcc--ccCCCCCCCCCCHHHHHHH
Q 045092          202 KEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQ--CSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       202 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~--C~~~~dP~~RPs~~~vl~~  263 (307)
                      ...      .... +.... ......+..  ....+..+++.+  |. ..++..||++.+|++.
T Consensus       241 ~~~------~~~~-i~~~~-~~~~~p~~~--~~s~~~~~li~~l~~~-~~~r~~r~~~~ei~~h  293 (363)
T cd05628         241 PQE------TYKK-VMNWK-ETLIFPPEV--PISEKAKDLILRFCCE-WEHRIGAPGVEEIKTN  293 (363)
T ss_pred             HHH------HHHH-HHcCc-CcccCCCcC--CCCHHHHHHHHHHcCC-hhhcCCCCCHHHHhCC
Confidence            211      1111 11100 000111111  123355555544  43 4455578999999764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=7e-20  Score=159.70  Aligned_cols=160  Identities=23%  Similarity=0.322  Sum_probs=123.3

Q ss_pred             CcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh--hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           89 NFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK--QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      +|+..+.||+|++|.||++... +++.||+|.+.....  .....+.+|++++.+++|+|++++++++.+....      
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            4777899999999999999854 678999999876543  4556899999999999999999999877653100      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~  160 (254)
T cd06627          81 AENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVV  160 (254)
T ss_pred             CCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcccccccc
Confidence                                                                                            


Q ss_pred             -CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHH
Q 045092          160 -PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRT  238 (307)
Q Consensus       160 -t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  238 (307)
                       +..|+|||+.....++.++|||++|+++++|++|+.|+.....     ... ...       ......+.++...+..+
T Consensus       161 ~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~-----~~~-~~~-------~~~~~~~~~~~~~~~~~  227 (254)
T cd06627         161 GTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP-----MAA-LFR-------IVQDDHPPLPEGISPEL  227 (254)
T ss_pred             cchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH-----HHH-HHH-------HhccCCCCCCCCCCHHH
Confidence             4569999999887889999999999999999999999853221     110 111       11112233344556688


Q ss_pred             HHHhccccCCCCCCCCCCHHHHHH
Q 045092          239 SDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .+++..|+ ..+|++||++.+++.
T Consensus       228 ~~~i~~~l-~~~p~~R~~~~~~l~  250 (254)
T cd06627         228 KDFLMQCF-QKDPNLRPTAKQLLK  250 (254)
T ss_pred             HHHHHHHH-hCChhhCcCHHHHhc
Confidence            99999999 999999999999874

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.82  E-value=2.5e-20  Score=172.94  Aligned_cols=175  Identities=14%  Similarity=0.154  Sum_probs=124.6

Q ss_pred             cHHHHHHHhcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeee
Q 045092           79 HLRQIKAATNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCT  154 (307)
Q Consensus        79 ~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~  154 (307)
                      .+.++....++|...+.||+|+||.||++... +++.||+|.+...   .......+.+|+.++..++||||+++++.+.
T Consensus        34 ~~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~  113 (371)
T cd05622          34 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ  113 (371)
T ss_pred             HHhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence            45566667789999999999999999999954 7889999998542   2223456889999999999999999998876


Q ss_pred             cCCC----------------------------------------------------------------------------
Q 045092          155 ETLK----------------------------------------------------------------------------  158 (307)
Q Consensus       155 ~~~~----------------------------------------------------------------------------  158 (307)
                      +...                                                                            
T Consensus       114 ~~~~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~  193 (371)
T cd05622         114 DDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN  193 (371)
T ss_pred             cCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcC
Confidence            5410                                                                            


Q ss_pred             -----------CCccccchhhhccC----CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhc
Q 045092          159 -----------QPIVYMAPEYAKHG----YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLN  223 (307)
Q Consensus       159 -----------~t~~y~aPE~~~~~----~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  223 (307)
                                 +|+.|+|||++...    .++.++|||||||++|||++|+.||.....      ...........    
T Consensus       194 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~------~~~~~~i~~~~----  263 (371)
T cd05622         194 KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL------VGTYSKIMNHK----  263 (371)
T ss_pred             cCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH------HHHHHHHHcCC----
Confidence                       06789999998643    378999999999999999999999964321      11111111110    


Q ss_pred             ccccCCCchhhHHHHHHHhccccCCCCCCC--CCCHHHHHHHh
Q 045092          224 GASCSKFGFKFYRRTSDGNDQCSSSVTPTN--RPLMSFVVSML  264 (307)
Q Consensus       224 ~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~--RPs~~~vl~~L  264 (307)
                      ..........++..+.+++..|+ ..++.+  ||++.++++..
T Consensus       264 ~~~~~~~~~~~s~~~~~li~~~L-~~~~~r~~r~~~~ei~~h~  305 (371)
T cd05622         264 NSLTFPDDNDISKEAKNLICAFL-TDREVRLGRNGVEEIKRHL  305 (371)
T ss_pred             CcccCCCcCCCCHHHHHHHHHHc-CChhhhcCCCCHHHHhcCc
Confidence            01111111235557888888998 744433  78999988753

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=5.6e-20  Score=166.39  Aligned_cols=162  Identities=18%  Similarity=0.210  Sum_probs=120.4

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh---hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK---QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      ++|...+.||+|+||.||++... +++.||+|.+.....   ...+.+.+|++++.+++|+||+++++.+.+....    
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            46888899999999999999954 689999999875432   2446789999999999999999999876543100    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~  160 (316)
T cd05574          81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV  160 (316)
T ss_pred             EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence                                                                                            


Q ss_pred             ----------------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCc
Q 045092          160 ----------------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDK  205 (307)
Q Consensus       160 ----------------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~  205 (307)
                                                        |..|+|||++.+..++.++||||||+++|+|++|+.||....... 
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~-  239 (316)
T cd05574         161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDE-  239 (316)
T ss_pred             ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHH-
Confidence                                              124999999998889999999999999999999999996433211 


Q ss_pred             ccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCC----HHHHHH
Q 045092          206 FYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPL----MSFVVS  262 (307)
Q Consensus       206 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs----~~~vl~  262 (307)
                       .    ...... .    .. ........+..+.+++..|+ +.+|++||+    +.+++.
T Consensus       240 -~----~~~~~~-~----~~-~~~~~~~~~~~~~~li~~~l-~~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         240 -T----FSNILK-K----EV-TFPGSPPVSSSARDLIRKLL-VKDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             -H----HHHHhc-C----Cc-cCCCccccCHHHHHHHHHHc-cCCHhHCCCchhhHHHHHc
Confidence             0    111110 0    00 00111124568999999999 999999999    666654

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.82  E-value=2.8e-20  Score=167.95  Aligned_cols=172  Identities=17%  Similarity=0.214  Sum_probs=119.2

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCCh--hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSK--QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      .++|+..+.||+|+||.||+|.. .+|+.||+|.++....  .....+.+|+.++.+++|+||+++++++......    
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            46789999999999999999995 4789999999864322  1233567899999999999999999887543100    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        86 v~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~  165 (309)
T cd07845          86 VMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPM  165 (309)
T ss_pred             EEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCCC
Confidence                                                                                            


Q ss_pred             -----Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHH-----------hhhhh
Q 045092          160 -----PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLK-----------RARKL  222 (307)
Q Consensus       160 -----t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~-----------~~~~~  222 (307)
                           +..|+|||.+.+ ..++.++||||||+++|||++|+.||.......   ....+.....           .....
T Consensus       166 ~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (309)
T cd07845         166 TPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE---QLDLIIQLLGTPNESIWPGFSDLPLV  242 (309)
T ss_pred             CcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHhcCCCChhhchhhhccccc
Confidence                 455999998865 457899999999999999999999996432211   1111111000           00000


Q ss_pred             cccccC--C---Cc---hhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          223 NGASCS--K---FG---FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       223 ~~~~~~--~---l~---~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .....+  .   +.   ...+..+.+++..|+ +.||++||++.+++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml-~~dp~~R~t~~~il~  289 (309)
T cd07845         243 GKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLL-MYDPKKRATAEEALE  289 (309)
T ss_pred             ccccccCCCCCchHHhccccCHHHHHHHHHHh-cCChhhCcCHHHHhc
Confidence            000000  0   00   112447788999999 999999999999975

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.82  E-value=5.2e-20  Score=160.56  Aligned_cols=161  Identities=19%  Similarity=0.314  Sum_probs=124.0

Q ss_pred             CcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh--hcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-------
Q 045092           89 NFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK--QGNREIVNEIGMISALQHPNLVKLYRLCTETLK-------  158 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-------  158 (307)
                      +|...+.||+|+||.||++... ++..||+|.+.....  .....+.+|+++++.++|+|++++++.+.....       
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            4777899999999999999954 688999999875432  455678999999999999999999876543200       


Q ss_pred             -----------------C--------------------------------------------------------------
Q 045092          159 -----------------Q--------------------------------------------------------------  159 (307)
Q Consensus       159 -----------------~--------------------------------------------------------------  159 (307)
                                       .                                                              
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~  160 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLA  160 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCccee
Confidence                             0                                                              


Q ss_pred             -----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          160 -----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       160 -----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                           ++.|+|||......++.++||||+|+++++|++|+.|+.....      .+....       ......+.++..+
T Consensus       161 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~------~~~~~~-------~~~~~~~~~~~~~  227 (258)
T cd08215         161 KTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL------LELALK-------ILKGQYPPIPSQY  227 (258)
T ss_pred             cceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH------HHHHHH-------HhcCCCCCCCCCC
Confidence                 4469999999888899999999999999999999999853321      111111       1111223344456


Q ss_pred             HHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      +..+.+++..|+ ..+|++||++.++++.
T Consensus       228 ~~~~~~~i~~~l-~~~p~~Rp~~~~ll~~  255 (258)
T cd08215         228 SSELRNLVSSLL-QKDPEERPSIAQILQS  255 (258)
T ss_pred             CHHHHHHHHHHc-CCChhhCcCHHHHhcC
Confidence            678999999999 9999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.82  E-value=1.6e-20  Score=173.11  Aligned_cols=165  Identities=18%  Similarity=0.262  Sum_probs=129.5

Q ss_pred             HHHhcCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCC---ChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC
Q 045092           84 KAATNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSK---SKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK  158 (307)
Q Consensus        84 ~~~t~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~  158 (307)
                      ....++|..++.||+|+|++|++|+ ..+++.+|||++.+.   .....+-...|-.+|.+| .||.|++||-.|.+...
T Consensus        69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s  148 (604)
T KOG0592|consen   69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES  148 (604)
T ss_pred             cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence            4456789999999999999999999 568999999998654   223345577899999999 89999999988776521


Q ss_pred             C-------------------------------------------------------------------------------
Q 045092          159 Q-------------------------------------------------------------------------------  159 (307)
Q Consensus       159 ~-------------------------------------------------------------------------------  159 (307)
                      .                                                                               
T Consensus       149 LYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~  228 (604)
T KOG0592|consen  149 LYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQ  228 (604)
T ss_pred             eEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhh
Confidence            1                                                                               


Q ss_pred             ---------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHh
Q 045092          160 ---------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKR  218 (307)
Q Consensus       160 ---------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~  218 (307)
                                           |..|.+||++..+..+..+|+|+|||+||.|+.|++||...+   +..+..   ..+  
T Consensus       229 ~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N---eyliFq---kI~--  300 (604)
T KOG0592|consen  229 KSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN---EYLIFQ---KIQ--  300 (604)
T ss_pred             ccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc---HHHHHH---HHH--
Confidence                                 778999999999999999999999999999999999995322   111111   111  


Q ss_pred             hhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          219 ARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       219 ~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                            .++-.++..++....+|+.+-+ ..||.+|++..||-+.
T Consensus       301 ------~l~y~fp~~fp~~a~dLv~KLL-v~dp~~Rlt~~qIk~H  338 (604)
T KOG0592|consen  301 ------ALDYEFPEGFPEDARDLIKKLL-VRDPSDRLTSQQIKAH  338 (604)
T ss_pred             ------HhcccCCCCCCHHHHHHHHHHH-ccCccccccHHHHhhC
Confidence                  1233445566678888888888 9999999999988764

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.82  E-value=4e-20  Score=165.44  Aligned_cols=171  Identities=19%  Similarity=0.259  Sum_probs=120.2

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh--hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK--QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      ++|+..+.||+|+||.||+|... +++.+|+|.++....  .....+.+|+.++.+++|+||+++++++......     
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            57888899999999999999964 688999999874432  2234578899999999999999999887654100     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        85 ~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~  164 (293)
T cd07843          85 MEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYT  164 (293)
T ss_pred             ehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCccccc
Confidence                                                                                            


Q ss_pred             ----CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHH-----------Hh----h
Q 045092          160 ----PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYL-----------KR----A  219 (307)
Q Consensus       160 ----t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~-----------~~----~  219 (307)
                          +..|+|||.+.+. .++.++|+||||++++||++|+.||........   ...+...+           ..    .
T Consensus       165 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (293)
T cd07843         165 QLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQ---LNKIFKLLGTPTEKIWPGFSELPGAK  241 (293)
T ss_pred             cccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCchHHHHHhhccchhc
Confidence                5569999988754 468999999999999999999999864322111   00000000           00    0


Q ss_pred             -hhh----cccccCCCchh-hHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          220 -RKL----NGASCSKFGFK-FYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       220 -~~~----~~~~~~~l~~~-~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                       ...    .......++.. .+..+.+++..|+ +.+|++||++.|++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l-~~~p~~R~t~~ell~  289 (293)
T cd07843         242 KKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLL-TYDPAKRISAEDALK  289 (293)
T ss_pred             ccccccccchhhhccccccCCChHHHHHHHHHh-ccCccccCCHHHHhc
Confidence             000    00011122222 3557889999999 999999999999975

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.82  E-value=1e-19  Score=159.32  Aligned_cols=155  Identities=25%  Similarity=0.424  Sum_probs=112.9

Q ss_pred             CcccCCCCeeEEEEEEcC-C----------CEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC----
Q 045092           94 NEISERGFGPVYRGLLAD-G----------KVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK----  158 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~~~-~----------~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~----  158 (307)
                      +.||+|+||.||+|.... +          ..|++|.+...... ...|.+|+.++++++|+||++++|++.....    
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~   79 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVRDENIMVE   79 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEecCCcEEEE
Confidence            468999999999999643 3          25788877654332 6789999999999999999999998752100    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        80 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~  159 (259)
T cd05037          80 EYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVL  159 (259)
T ss_pred             EcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcccccc
Confidence                                                                                            


Q ss_pred             ------CCccccchhhhccC--CCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC
Q 045092          159 ------QPIVYMAPEYAKHG--YLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK  229 (307)
Q Consensus       159 ------~t~~y~aPE~~~~~--~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  229 (307)
                            .+..|+|||++...  .++.++||||||+++|||++ |..|+.......      +.. .....        ..
T Consensus       160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~------~~~-~~~~~--------~~  224 (259)
T cd05037         160 SREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE------KER-FYQDQ--------HR  224 (259)
T ss_pred             cccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh------HHH-HHhcC--------CC
Confidence                  04569999998876  78999999999999999999 577774332111      000 11100        00


Q ss_pred             CchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhc
Q 045092          230 FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLE  265 (307)
Q Consensus       230 l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~  265 (307)
                      .+......+.+++..|+ ..+|.+||++.++++.|+
T Consensus       225 ~~~~~~~~~~~li~~~l-~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         225 LPMPDCAELANLINQCW-TYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             CCCCCchHHHHHHHHHh-ccChhhCCCHHHHHHhcC
Confidence            11111258889999999 999999999999998874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.82  E-value=1.2e-19  Score=163.85  Aligned_cols=173  Identities=20%  Similarity=0.220  Sum_probs=119.3

Q ss_pred             CcccCCcccCCCCeeEEEEEEc---CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           89 NFASENEISERGFGPVYRGLLA---DGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~---~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      .|+..+.||+|+||.||+|...   ++..||+|.+....   ......+.+|+.++.+++|+||+++++++.+....   
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            3677889999999999999953   57899999987632   33346788999999999999999999988655110   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~  160 (316)
T cd07842          81 LLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLAR  160 (316)
T ss_pred             EEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCcccc
Confidence                                                                                            


Q ss_pred             -----------------CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccH---HHHHHHHHH-
Q 045092          160 -----------------PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYL---LDWLGSYLK-  217 (307)
Q Consensus       160 -----------------t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l---~~~~~~~~~-  217 (307)
                                       +..|+|||++.+. .++.++||||||++++||++|+.||...........   ...+...+. 
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (316)
T cd07842         161 LFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEV  240 (316)
T ss_pred             ccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHH
Confidence                             3459999988764 578999999999999999999999964433220000   000000000 


Q ss_pred             -------------hhhhhc----cccc-----CCCch------hhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          218 -------------RARKLN----GASC-----SKFGF------KFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       218 -------------~~~~~~----~~~~-----~~l~~------~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                                   ......    ....     ..+..      ....++.+++.+|+ +.||++||++.+++.
T Consensus       241 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l-~~~P~~Rps~~eil~  312 (316)
T cd07842         241 LGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLL-EYDPTKRITAEEALE  312 (316)
T ss_pred             hCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHh-cCCcccCcCHHHHhc
Confidence                         000000    0000     01100      22346889999999 999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.82  E-value=4.2e-20  Score=168.90  Aligned_cols=177  Identities=16%  Similarity=0.201  Sum_probs=120.7

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC--ChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCCC--
Q 045092           86 ATNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK--SKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~--  159 (307)
                      ..++|...+.||+|+||.||+|... ++..+|||++...  .......+.+|+.++.++ +|+||++++++|......  
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~   84 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI   84 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence            3567888899999999999999954 6889999988542  223345677899999999 999999999987532100  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        85 ~lv~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~  164 (337)
T cd07852          85 YLVFEYMETDLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENP  164 (337)
T ss_pred             EEEecccccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccc
Confidence                                                                                            


Q ss_pred             ----------Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCccc-HHH-----------HHHHHH
Q 045092          160 ----------PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFY-LLD-----------WLGSYL  216 (307)
Q Consensus       160 ----------t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~-l~~-----------~~~~~~  216 (307)
                                +..|+|||++.+ ..++.++||||||+++++|++|+.||.......... +..           .+....
T Consensus       165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (337)
T cd07852         165 ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPF  244 (337)
T ss_pred             cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhh
Confidence                      335999998754 567889999999999999999999985332111000 000           000000


Q ss_pred             Hhhh--hhccccc---CCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          217 KRAR--KLNGASC---SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       217 ~~~~--~~~~~~~---~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ....  .+.....   ..+...++..+.+++..|+ +.+|++||++.++++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l-~~~P~~Rps~~~il~~  295 (337)
T cd07852         245 AATMLDSLPSRPRKPLDELLPKASDDALDLLKKLL-VFNPNKRLTAEEALEH  295 (337)
T ss_pred             HHHhhhhcccccccchhhhccCCCHHHHHHHHHhc-cCCcccccCHHHHhhC
Confidence            0000  0000000   0111124558899999999 9999999999999864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.82  E-value=5.1e-20  Score=163.73  Aligned_cols=171  Identities=18%  Similarity=0.242  Sum_probs=119.7

Q ss_pred             CcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh-hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           89 NFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK-QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      +|+..+.||+|++|.||+|... ++..||||.++.... .....+.+|+.++++++|+||+++++++.+....       
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            5788899999999999999964 788999999875432 2345678899999999999999999987654110       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~  160 (284)
T cd07836          81 DKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNE  160 (284)
T ss_pred             CccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccccc
Confidence                                                                                            


Q ss_pred             --CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHH----------HHHHHhhhhhcccc
Q 045092          160 --PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWL----------GSYLKRARKLNGAS  226 (307)
Q Consensus       160 --t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~----------~~~~~~~~~~~~~~  226 (307)
                        +..|++||++.++ .++.++||||||+++++|++|+.||......+.  +....          +..+..........
T Consensus       161 ~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd07836         161 VVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQ--LLKIFRIMGTPTESTWPGISQLPEYKPTF  238 (284)
T ss_pred             cccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHH--HHHHHHHhCCCChhhHHHHhcCchhcccc
Confidence              4569999988654 578899999999999999999999864332110  00000          00000000000000


Q ss_pred             c----CC---CchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          227 C----SK---FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       227 ~----~~---l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .    ..   +....+..+.+++..|+ +.||.+||++.++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~i~~~l-~~~p~~R~~~~~~l~  280 (284)
T cd07836         239 PRYPPQDLQQLFPHADPLGIDLLHRLL-QLNPELRISAHDALQ  280 (284)
T ss_pred             cCCChHHHHHHhhhcCcHHHHHHHHHh-cCCcccCCCHHHHhc
Confidence            0    00   01122347889999999 999999999999874

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.82  E-value=1.1e-19  Score=163.01  Aligned_cols=164  Identities=23%  Similarity=0.309  Sum_probs=119.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS-KQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~----  159 (307)
                      .++|...+.||+|+||.||+|... +++.||||.++... ......+..|+.++.+. .|+||++++++|.+....    
T Consensus        14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~   93 (296)
T cd06618          14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM   93 (296)
T ss_pred             cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence            466788899999999999999975 48999999987543 23345677788877777 499999999987643100    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        94 e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~~  173 (296)
T cd06618          94 ELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTR  173 (296)
T ss_pred             eccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCcccC
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccC----CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCc-
Q 045092          160 ---PIVYMAPEYAKHG----YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFG-  231 (307)
Q Consensus       160 ---t~~y~aPE~~~~~----~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~-  231 (307)
                         +..|+|||++...    .++.++||||||+++|||++|+.||......     .+.+......       ..+.++ 
T Consensus       174 ~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~~~~~~~~-------~~~~~~~  241 (296)
T cd06618         174 SAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-----FEVLTKILQE-------EPPSLPP  241 (296)
T ss_pred             CCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-----HHHHHHHhcC-------CCCCCCC
Confidence               3579999998754    3889999999999999999999998532110     1111111111       011111 


Q ss_pred             -hhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          232 -FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       232 -~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                       ..++.++.+++.+|+ ..||.+||++.+++..
T Consensus       242 ~~~~~~~l~~li~~~l-~~~p~~Rp~~~~il~~  273 (296)
T cd06618         242 NEGFSPDFCSFVDLCL-TKDHRKRPKYRELLQH  273 (296)
T ss_pred             CCCCCHHHHHHHHHHc-cCChhhCCCHHHHhcC
Confidence             135568899999999 9999999999999754

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.82  E-value=4.3e-20  Score=168.10  Aligned_cols=154  Identities=14%  Similarity=0.134  Sum_probs=114.4

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCC-CCCccceeeeeecCCC-----
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIGMISALQ-HPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~-----  158 (307)
                      +|+..+.||+|+||.||++.. .+++.||||++....   ....+.+..|+.++..+. |++|+++++++.+...     
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            467779999999999999995 478999999986431   233456788999998885 5778888876654310     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~  160 (323)
T cd05615          81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRT  160 (323)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCccccC
Confidence                                                                                            


Q ss_pred             --CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          159 --QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       159 --~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                        +|+.|+|||++.++.++.++|||||||++|||++|+.||.....   ..+   ... +...       ...++...+.
T Consensus       161 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~---~~~---~~~-i~~~-------~~~~p~~~~~  226 (323)
T cd05615         161 FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE---DEL---FQS-IMEH-------NVSYPKSLSK  226 (323)
T ss_pred             ccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH---HHH---HHH-HHhC-------CCCCCccCCH
Confidence              06789999999998999999999999999999999999964321   111   111 1111       1123344556


Q ss_pred             HHHHHhccccCCCCCCCCCCH
Q 045092          237 RTSDGNDQCSSSVTPTNRPLM  257 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~  257 (307)
                      .+.+++..|+ +.+|.+|++.
T Consensus       227 ~~~~li~~~l-~~~p~~R~~~  246 (323)
T cd05615         227 EAVSICKGLM-TKHPSKRLGC  246 (323)
T ss_pred             HHHHHHHHHc-ccCHhhCCCC
Confidence            8889999999 9999999974

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.82  E-value=1.3e-19  Score=160.71  Aligned_cols=169  Identities=19%  Similarity=0.225  Sum_probs=119.3

Q ss_pred             cccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh--hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           90 FASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK--QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      |...+.||+|++|.||++... +++.+|+|.+.....  .....+.+|++++++++|+||+++++++......       
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            456788999999999999954 788999999865432  2356788999999999999999999876543110       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~  160 (283)
T cd05118          81 DTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVV  160 (283)
T ss_pred             CCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCccC
Confidence                                                                                            


Q ss_pred             CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHh---------------hh-hh
Q 045092          160 PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKR---------------AR-KL  222 (307)
Q Consensus       160 t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~---------------~~-~~  222 (307)
                      +..|+|||.+.+. .++.++||||||+++++|++|+.||......+.   .......+..               .. ..
T Consensus       161 ~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (283)
T cd05118         161 TRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQ---LFKIFRTLGTPDPEVWPKFTSLARNYKFSF  237 (283)
T ss_pred             cccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHcCCCchHhcccchhhhhhhhhhh
Confidence            3459999998876 789999999999999999999999853322110   0000000000               00 00


Q ss_pred             ccccc---CCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          223 NGASC---SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       223 ~~~~~---~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .....   ..+....+.++.+++..|+ +.||.+||++.+++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~i~~~l-~~~P~~Rp~~~~ll~  279 (283)
T cd05118         238 PKKAGMPLPKLFPNASPQALDLLSQML-HYDPHKRITAEQALA  279 (283)
T ss_pred             ccccccCHHHhhhhhCHHHHHHHHHHh-ccCcccCcCHHHHhh
Confidence            00000   1112234558999999999 999999999999875

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.82  E-value=6e-20  Score=163.34  Aligned_cols=171  Identities=16%  Similarity=0.133  Sum_probs=119.4

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      +|...+.||+|+||.||+|.. .+++.||+|.+....  ......+.+|+.++++++|+||+++++++......      
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            477789999999999999995 478999999987543  23356799999999999999999999876543100      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  160 (286)
T cd07832          81 MPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQ  160 (286)
T ss_pred             cCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccc
Confidence                                                                                            


Q ss_pred             --CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhh--------------hhh
Q 045092          160 --PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRA--------------RKL  222 (307)
Q Consensus       160 --t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~--------------~~~  222 (307)
                        +..|+|||.+.+. .++.++||||+|++++||++|++++.....  . .........+...              ..+
T Consensus       161 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (286)
T cd07832         161 VATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND--I-EQLAIVFRTLGTPNEETWPGLTSLPDYNKI  237 (286)
T ss_pred             cCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCH--H-HHHHHHHHHcCCCChHHHhhccCcchhhcc
Confidence              4579999988654 468999999999999999999877743221  1 1111111100000              000


Q ss_pred             cccccCC-----CchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          223 NGASCSK-----FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       223 ~~~~~~~-----l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .......     .....+..+.+++..|+ ..+|.+||++++++..
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l-~~~p~~R~~~~~~l~h  282 (286)
T cd07832         238 TFPESKPIPLEEIFPDASPEALDLLKGLL-VYDPSKRLSAAEALRH  282 (286)
T ss_pred             cCCCCCcchHHHhCCCccHHHHHHHHHHh-ccChhhCCCHHHHhhC
Confidence            0000000     01123458899999999 9999999999999764

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.82  E-value=7.6e-20  Score=168.85  Aligned_cols=166  Identities=18%  Similarity=0.240  Sum_probs=129.8

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh---hcHHHHHHHHHHHhhCC-CCCccceeeeeecCCCC--
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK---QGNREIVNEIGMISALQ-HPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~--  159 (307)
                      ...|...+.||+|.||.||++... +|+.+|+|.+.....   .....+.+|+++|.++. |||||.+++.+.+....  
T Consensus        34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l  113 (382)
T KOG0032|consen   34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL  113 (382)
T ss_pred             cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence            456888899999999999999954 699999999975533   23468999999999997 99999999988775211  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       114 vmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~  193 (382)
T KOG0032|consen  114 VMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGE  193 (382)
T ss_pred             EEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCc
Confidence                                                                                            


Q ss_pred             -------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCch
Q 045092          160 -------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGF  232 (307)
Q Consensus       160 -------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  232 (307)
                             |+.|+|||.+....|+..+||||.||++|.|++|.+||........  +     ..+..+. + .+..+. -.
T Consensus       194 ~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~--~-----~~i~~~~-~-~f~~~~-w~  263 (382)
T KOG0032|consen  194 RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEI--F-----LAILRGD-F-DFTSEP-WD  263 (382)
T ss_pred             eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHH--H-----HHHHcCC-C-CCCCCC-cc
Confidence                   9999999999999999999999999999999999999965432221  1     1222222 1 111221 12


Q ss_pred             hhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          233 KFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       233 ~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .+.....+++..++ ..||..|+++.++++.
T Consensus       264 ~is~~akd~i~~ll-~~dp~~R~ta~~~L~H  293 (382)
T KOG0032|consen  264 DISESAKDFIRKLL-EFDPRKRLTAAQALQH  293 (382)
T ss_pred             ccCHHHHHHHHHhc-ccCcccCCCHHHHhcC
Confidence            34558899999999 9999999999999883

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.82  E-value=1.4e-20  Score=171.36  Aligned_cols=151  Identities=21%  Similarity=0.214  Sum_probs=110.1

Q ss_pred             CcccCCCCeeEEEEEE-cCCCEEEEEEccCC---ChhcHHHHHHHHH-HHhhCCCCCccceeeeeecCCCC---------
Q 045092           94 NEISERGFGPVYRGLL-ADGKVIEVKQLSSK---SKQGNREIVNEIG-MISALQHPNLVKLYRLCTETLKQ---------  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~~---------  159 (307)
                      +.||+|+||.||++.. .+|+.||||++...   .......+..|.. +++.++|+||+++++++......         
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            4699999999999994 47899999998643   1223345666665 46678999999999877654110         


Q ss_pred             ------------------------------------------------------------------------------Cc
Q 045092          160 ------------------------------------------------------------------------------PI  161 (307)
Q Consensus       160 ------------------------------------------------------------------------------t~  161 (307)
                                                                                                    |+
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~  160 (325)
T cd05604          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTP  160 (325)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCCh
Confidence                                                                                          67


Q ss_pred             cccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHH
Q 045092          162 VYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDG  241 (307)
Q Consensus       162 ~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l  241 (307)
                      .|+|||++.++.++.++|||||||++|||++|+.||.....      .+...... ..       ...+....+..+.++
T Consensus       161 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~------~~~~~~~~-~~-------~~~~~~~~~~~~~~l  226 (325)
T cd05604         161 EYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV------AEMYDNIL-HK-------PLVLRPGASLTAWSI  226 (325)
T ss_pred             hhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH------HHHHHHHH-cC-------CccCCCCCCHHHHHH
Confidence            79999999999999999999999999999999999964321      11111111 11       111222345578889


Q ss_pred             hccccCCCCCCCCCCHHH
Q 045092          242 NDQCSSSVTPTNRPLMSF  259 (307)
Q Consensus       242 ~~~C~~~~dP~~RPs~~~  259 (307)
                      +..|+ +.+|.+||++.+
T Consensus       227 l~~ll-~~~p~~R~~~~~  243 (325)
T cd05604         227 LEELL-EKDRQRRLGAKE  243 (325)
T ss_pred             HHHHh-ccCHHhcCCCCC
Confidence            99999 999999998753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.82  E-value=2.7e-20  Score=169.34  Aligned_cols=150  Identities=21%  Similarity=0.224  Sum_probs=110.1

Q ss_pred             CcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHH-HHhhCCCCCccceeeeeecCCC----------
Q 045092           94 NEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIG-MISALQHPNLVKLYRLCTETLK----------  158 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~----------  158 (307)
                      +.||+|+||.||+|... +++.||||++....   ......+.+|.. +++.++|+||+++++++.....          
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            46999999999999954 78999999986432   222344555655 4677899999999887654310          


Q ss_pred             -----------------------------------------------------------------------------CCc
Q 045092          159 -----------------------------------------------------------------------------QPI  161 (307)
Q Consensus       159 -----------------------------------------------------------------------------~t~  161 (307)
                                                                                                   +|+
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (323)
T cd05575          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTP  160 (323)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCCh
Confidence                                                                                         067


Q ss_pred             cccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHH
Q 045092          162 VYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDG  241 (307)
Q Consensus       162 ~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l  241 (307)
                      .|+|||++.++.++.++|||||||++|||++|+.||.....      .+...... ..       ...+....+..+.++
T Consensus       161 ~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~------~~~~~~i~-~~-------~~~~~~~~~~~~~~l  226 (323)
T cd05575         161 EYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT------AEMYDNIL-NK-------PLRLKPNISVSARHL  226 (323)
T ss_pred             hhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH------HHHHHHHH-cC-------CCCCCCCCCHHHHHH
Confidence            89999999999999999999999999999999999964321      11111111 11       112233446688999


Q ss_pred             hccccCCCCCCCCCCHH
Q 045092          242 NDQCSSSVTPTNRPLMS  258 (307)
Q Consensus       242 ~~~C~~~~dP~~RPs~~  258 (307)
                      +..|+ +.||.+||++.
T Consensus       227 i~~~l-~~~p~~R~~~~  242 (323)
T cd05575         227 LEGLL-QKDRTKRLGAK  242 (323)
T ss_pred             HHHHh-hcCHHhCCCCC
Confidence            99999 99999999874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=2e-20  Score=173.78  Aligned_cols=164  Identities=16%  Similarity=0.166  Sum_probs=117.9

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      ++|...+.||+|+||.||++.. .+++.||||.+...   .....+.+.+|++++.+++|+||+++++++.+...     
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            4788899999999999999984 47899999998543   12334578899999999999999999987765410     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  160 (377)
T cd05629          81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYY  160 (377)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence                                                                                            


Q ss_pred             -------------------------------------------------CCccccchhhhccCCCCchhHHHHHHHHHHH
Q 045092          159 -------------------------------------------------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLE  189 (307)
Q Consensus       159 -------------------------------------------------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~e  189 (307)
                                                                       +|+.|+|||++.+..++.++|||||||++||
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e  240 (377)
T cd05629         161 QKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFE  240 (377)
T ss_pred             cccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhh
Confidence                                                             1235999999998899999999999999999


Q ss_pred             HHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCC---CCCHHHHHHH
Q 045092          190 IESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTN---RPLMSFVVSM  263 (307)
Q Consensus       190 lltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~---RPs~~~vl~~  263 (307)
                      |++|+.||......      +.........   .....+. ....+.++.+++..|+ . +|.+   |+++.+++..
T Consensus       241 lltG~~Pf~~~~~~------~~~~~i~~~~---~~~~~p~-~~~~s~~~~dli~~lL-~-~~~~r~~r~~~~~~l~h  305 (377)
T cd05629         241 CLIGWPPFCSENSH------ETYRKIINWR---ETLYFPD-DIHLSVEAEDLIRRLI-T-NAENRLGRGGAHEIKSH  305 (377)
T ss_pred             hhcCCCCCCCCCHH------HHHHHHHccC---CccCCCC-CCCCCHHHHHHHHHHh-c-CHhhcCCCCCHHHHhcC
Confidence            99999999643221      1111111100   0010111 0123457888888888 7 5665   4699998764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=5.3e-20  Score=162.42  Aligned_cols=170  Identities=16%  Similarity=0.217  Sum_probs=123.3

Q ss_pred             hcCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEcc--CCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGL-LADGKVIEVKQLS--SKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      ...|...+.||+|+||.|..+. ..+|..||||++.  -......+.-.+|+++|+.++|+||+.+++.+..+...    
T Consensus        21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D  100 (359)
T KOG0660|consen   21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND  100 (359)
T ss_pred             cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence            4455557899999999999999 4588999999987  33455677889999999999999999999887663110    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       101 vYiV~elMetDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~  180 (359)
T KOG0660|consen  101 VYLVFELMETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFE  180 (359)
T ss_pred             eEEehhHHhhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccCc
Confidence                                                                                            


Q ss_pred             ---------Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHH-----------------HH
Q 045092          160 ---------PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLD-----------------WL  212 (307)
Q Consensus       160 ---------t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~-----------------~~  212 (307)
                               |..|.|||.+.+ ..|+...||||.|||+.||++|++-|.+.+.-....++-                 .+
T Consensus       181 ~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~a  260 (359)
T KOG0660|consen  181 DGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKA  260 (359)
T ss_pred             ccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHH
Confidence                     888999997764 579999999999999999999999886543222111110                 01


Q ss_pred             HHHHHhhhhhcccccCCCc-----hhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          213 GSYLKRARKLNGASCSKFG-----FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       213 ~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ..++..   ..  ..+..+     .......+++..+++ ..||.+|+|++|.+.
T Consensus       261 r~yi~s---lp--~~p~~~f~~~fp~a~p~AidLlekmL-~fdP~kRita~eAL~  309 (359)
T KOG0660|consen  261 RPYIKS---LP--QIPKQPFSSIFPNANPLAIDLLEKML-VFDPKKRITAEEALA  309 (359)
T ss_pred             HHHHHh---CC--CCCCCCHHHHcCCCCHHHHHHHHHHh-ccCccccCCHHHHhc
Confidence            111111   00  011111     122337888999999 999999999999875

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.82  E-value=1.4e-21  Score=164.37  Aligned_cols=165  Identities=18%  Similarity=0.198  Sum_probs=124.9

Q ss_pred             hcCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      +++|++.+.||+|.|+.||++. ..+|+.+|+|++...  +..+.+++.+|+.+-..|+||||++|.....+..-     
T Consensus        10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF   89 (355)
T KOG0033|consen   10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   89 (355)
T ss_pred             chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence            4667788899999999999998 458999999987633  23355678899999999999999999765443210     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        90 e~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~  169 (355)
T KOG0033|consen   90 DLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAW  169 (355)
T ss_pred             ecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCcccc
Confidence                                                                                            


Q ss_pred             ----CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          159 ----QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       159 ----~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                          +||+|||||++....|+..+|||+.||+||-|+.|..||.....   .   + +...+..+.   -..++..-...
T Consensus       170 ~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~---~---r-lye~I~~g~---yd~~~~~w~~i  239 (355)
T KOG0033|consen  170 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ---H---R-LYEQIKAGA---YDYPSPEWDTV  239 (355)
T ss_pred             ccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH---H---H-HHHHHhccc---cCCCCcccCcC
Confidence                19999999999999999999999999999999999999964221   1   1 222222221   11122222334


Q ss_pred             HHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .++..+++.+++ ..||.+|.|+.|.++
T Consensus       240 s~~Ak~LvrrML-~~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  240 TPEAKSLIRRML-TVNPKKRITADEALK  266 (355)
T ss_pred             CHHHHHHHHHHh-ccChhhhccHHHHhC
Confidence            558889999999 999999999998764

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.82  E-value=6.2e-20  Score=164.73  Aligned_cols=174  Identities=16%  Similarity=0.181  Sum_probs=121.1

Q ss_pred             HHhcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCC----
Q 045092           85 AATNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETL----  157 (307)
Q Consensus        85 ~~t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~----  157 (307)
                      ...++|+..+.||+|+||.||+|... +++.||||.++...  ......+.+|++++++++|+||+++++++.+..    
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~   83 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD   83 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence            34678999999999999999999964 68899999986432  223356788999999999999999988765421    


Q ss_pred             ------CC------------------------------------------------------------------------
Q 045092          158 ------KQ------------------------------------------------------------------------  159 (307)
Q Consensus       158 ------~~------------------------------------------------------------------------  159 (307)
                            ..                                                                        
T Consensus        84 ~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~  163 (302)
T cd07864          84 FKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLA  163 (302)
T ss_pred             ccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCccccc
Confidence                  00                                                                        


Q ss_pred             ----------------Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhh-
Q 045092          160 ----------------PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARK-  221 (307)
Q Consensus       160 ----------------t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~-  221 (307)
                                      +..|+|||.+.+ ..++.++|||||||+++||++|+.||.......   ....+......... 
T Consensus       164 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~  240 (302)
T cd07864         164 RLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELA---QLELISRLCGSPCPA  240 (302)
T ss_pred             ccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCCChh
Confidence                            335999998764 457889999999999999999999996322111   11111111100000 


Q ss_pred             -hccc--------ccC------C---CchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          222 -LNGA--------SCS------K---FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       222 -~~~~--------~~~------~---l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                       ....        .++      .   .....+..+.+++..|+ +.+|.+||++.+++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l-~~~P~~Rp~~~~il~  298 (302)
T cd07864         241 VWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHML-TLDPSKRCTAEEALN  298 (302)
T ss_pred             hcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHc-cCChhhCCCHHHHhc
Confidence             0000        000      0   01123558899999999 999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=7.8e-20  Score=166.96  Aligned_cols=167  Identities=14%  Similarity=0.124  Sum_probs=115.3

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      ++|...+.||+|+||.||++.. .+++.||||.+...   .....+.+.+|+.++..++|+||+++++++.+....    
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            4788899999999999999995 46899999998642   122345688999999999999999999877654110    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~  160 (331)
T cd05597          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQS  160 (331)
T ss_pred             ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccc
Confidence                                                                                            


Q ss_pred             -----Cccccchhhhcc-----CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC
Q 045092          160 -----PIVYMAPEYAKH-----GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK  229 (307)
Q Consensus       160 -----t~~y~aPE~~~~-----~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  229 (307)
                           |+.|+|||++..     +.++.++|||||||++|||++|+.||.....      .+.......... .  ...+.
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~------~~~~~~i~~~~~-~--~~~~~  231 (331)
T cd05597         161 NVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL------VETYGKIMNHKE-H--FQFPP  231 (331)
T ss_pred             cceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH------HHHHHHHHcCCC-c--ccCCC
Confidence                 678999999863     4578899999999999999999999953221      111111111110 0  11111


Q ss_pred             CchhhHHHHHHHhcccc-CCCCCCCCCCHHHHHHH
Q 045092          230 FGFKFYRRTSDGNDQCS-SSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       230 l~~~~~~~~~~l~~~C~-~~~dP~~RPs~~~vl~~  263 (307)
                      .....+..+.+++..|+ ...++..||++.++++.
T Consensus       232 ~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h  266 (331)
T cd05597         232 DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH  266 (331)
T ss_pred             ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence            11224456666776654 03444458899988765

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.82  E-value=2.3e-20  Score=173.66  Aligned_cols=68  Identities=16%  Similarity=0.238  Sum_probs=56.6

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecC
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTET  156 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~  156 (307)
                      .|...+.||+|+||.||+|.. .+++.||+|.+....   ......+.+|+.++.+++|+||+++++.+.+.
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~   73 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDK   73 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeC
Confidence            578889999999999999994 478899999986432   22345788999999999999999999887654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.82  E-value=1.9e-20  Score=185.72  Aligned_cols=75  Identities=28%  Similarity=0.497  Sum_probs=62.3

Q ss_pred             HHHHHHhcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeec
Q 045092           81 RQIKAATNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTE  155 (307)
Q Consensus        81 ~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~  155 (307)
                      .......++|+..+.||+||||.||+++.. +|+.+|||++.... ........+|+.+|.+++|||||++|....+
T Consensus       472 r~~SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVE  548 (1351)
T KOG1035|consen  472 RQFSRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVE  548 (1351)
T ss_pred             cchhhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhc
Confidence            334567889999999999999999999944 89999999997553 3334578899999999999999999876554

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.82  E-value=1.6e-20  Score=174.29  Aligned_cols=164  Identities=16%  Similarity=0.128  Sum_probs=118.0

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      ++|...+.||+|+||.||++.. .+++.||||.+....   ......+.+|+.++.+++|+||+++++.+.+...     
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            4688899999999999999994 478999999986432   2234568899999999999999999987654310     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~  160 (376)
T cd05598          81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY  160 (376)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccc
Confidence                                                                                            


Q ss_pred             ---------------------------------------------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhC
Q 045092          159 ---------------------------------------------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESG  193 (307)
Q Consensus       159 ---------------------------------------------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg  193 (307)
                                                                   +|+.|+|||++.+..++.++|||||||++|||++|
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G  240 (376)
T cd05598         161 QKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG  240 (376)
T ss_pred             ccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhC
Confidence                                                         13469999999998999999999999999999999


Q ss_pred             CCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCC---CHHHHHHH
Q 045092          194 RSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRP---LMSFVVSM  263 (307)
Q Consensus       194 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RP---s~~~vl~~  263 (307)
                      +.||.......      .... +...   ............+..+.+++.+|+ . +|.+|+   ++.++++.
T Consensus       241 ~~Pf~~~~~~~------~~~~-i~~~---~~~~~~~~~~~~s~~~~~li~~l~-~-~p~~R~~~~t~~ell~h  301 (376)
T cd05598         241 QPPFLADTPAE------TQLK-VINW---ETTLHIPSQAKLSREASDLILRLC-C-GAEDRLGKNGADEIKAH  301 (376)
T ss_pred             CCCCCCCCHHH------HHHH-Hhcc---CccccCCCCCCCCHHHHHHHHHHh-c-CHhhcCCCCCHHHHhCC
Confidence            99996433211      1111 1110   000111111234456677777765 4 999999   88888754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.82  E-value=1.5e-20  Score=166.24  Aligned_cols=166  Identities=18%  Similarity=0.237  Sum_probs=118.2

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--------
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--------  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--------  159 (307)
                      .|...+++|.|+||.||+|.. .+++.||||+.-....    ---+|+++|+.+.|||||+|.-++......        
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV  100 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV  100 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence            355568999999999999995 4678999999754432    233699999999999999998877654211        


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       101 leymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~e  180 (364)
T KOG0658|consen  101 LEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGE  180 (364)
T ss_pred             HHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeeccCC
Confidence                                                                                            


Q ss_pred             -------CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHH--------hhh-hh
Q 045092          160 -------PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLK--------RAR-KL  222 (307)
Q Consensus       160 -------t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~--------~~~-~~  222 (307)
                             |..|.|||.+.+. .|+.+.||||.|||+.||+-|++-|.+.+..+.  +... ...+.        ..+ ..
T Consensus       181 pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQ--L~eI-ik~lG~Pt~e~I~~mn~~y  257 (364)
T KOG0658|consen  181 PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQ--LVEI-IKVLGTPTREDIKSMNPNY  257 (364)
T ss_pred             CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHH--HHHH-HHHhCCCCHHHHhhcCccc
Confidence                   8899999998864 699999999999999999999998865332221  2111 11111        000 00


Q ss_pred             cccccCCC---------chhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          223 NGASCSKF---------GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       223 ~~~~~~~l---------~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .+...|.+         ....+.+..++..+++ +.+|.+|.++.|++.
T Consensus       258 ~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L-~Y~P~~R~~~~~~l~  305 (364)
T KOG0658|consen  258 TEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLL-QYSPSKRLSALEALA  305 (364)
T ss_pred             ccccCcccccccceeecccCCCHHHHHHHHHHh-ccChhhcCCHHHHhc
Confidence            11111222         2233458899999999 999999999988764

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.82  E-value=3.9e-20  Score=171.58  Aligned_cols=170  Identities=15%  Similarity=0.181  Sum_probs=121.2

Q ss_pred             HHHHHHhcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecC
Q 045092           81 RQIKAATNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTET  156 (307)
Q Consensus        81 ~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~  156 (307)
                      .++....++|+..+.||+|+||.||++... +++.||+|.+...   .......+.+|+.++..++||||+++++++.+.
T Consensus        36 ~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~  115 (370)
T cd05621          36 RKLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDD  115 (370)
T ss_pred             HhcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC
Confidence            344455678999999999999999999954 6889999998642   222345688999999999999999999887654


Q ss_pred             CC------------------------------------------------------------------------------
Q 045092          157 LK------------------------------------------------------------------------------  158 (307)
Q Consensus       157 ~~------------------------------------------------------------------------------  158 (307)
                      ..                                                                              
T Consensus       116 ~~~~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~  195 (370)
T cd05621         116 KYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET  195 (370)
T ss_pred             CEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccC
Confidence            11                                                                              


Q ss_pred             ---------CCccccchhhhccC----CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhccc
Q 045092          159 ---------QPIVYMAPEYAKHG----YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGA  225 (307)
Q Consensus       159 ---------~t~~y~aPE~~~~~----~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  225 (307)
                               +|+.|+|||.+.+.    .++.++||||+||++|||++|+.||.....      ............     
T Consensus       196 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~------~~~~~~i~~~~~-----  264 (370)
T cd05621         196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL------VGTYSKIMDHKN-----  264 (370)
T ss_pred             CceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCc-----
Confidence                     17789999998653    478899999999999999999999964321      111111111100     


Q ss_pred             ccCCCc--hhhHHHHHHHhccccCCCCCCC--CCCHHHHHHH
Q 045092          226 SCSKFG--FKFYRRTSDGNDQCSSSVTPTN--RPLMSFVVSM  263 (307)
Q Consensus       226 ~~~~l~--~~~~~~~~~l~~~C~~~~dP~~--RPs~~~vl~~  263 (307)
                       ...++  ...+..+.+++..|+ ..++.+  ||++.++++.
T Consensus       265 -~~~~p~~~~~s~~~~~li~~~L-~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         265 -SLNFPEDVEISKHAKNLICAFL-TDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             -ccCCCCcccCCHHHHHHHHHHc-cCchhccCCCCHHHHhcC
Confidence             11111  123456777787887 755543  8899999875

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.82  E-value=5e-20  Score=165.79  Aligned_cols=172  Identities=22%  Similarity=0.272  Sum_probs=117.3

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh--hcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK--QGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      .++|...+.||+|+||.||+|... +++.||||.+.....  .....+.+|++++.+++|+||+++++++.+...     
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            578999999999999999999954 688999998864322  223467889999999999999999876532100     


Q ss_pred             ------------------------C-------------------------------------------------------
Q 045092          159 ------------------------Q-------------------------------------------------------  159 (307)
Q Consensus       159 ------------------------~-------------------------------------------------------  159 (307)
                                              .                                                       
T Consensus        87 ~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  166 (311)
T cd07866          87 RGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYD  166 (311)
T ss_pred             CceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhcc
Confidence                                    0                                                       


Q ss_pred             ----------------------CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHH
Q 045092          160 ----------------------PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYL  216 (307)
Q Consensus       160 ----------------------t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~  216 (307)
                                            ++.|+|||.+.++ .++.++|||||||+++||++|+.||........   ...+....
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~---~~~~~~~~  243 (311)
T cd07866         167 GPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQ---LHLIFKLC  243 (311)
T ss_pred             CCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHh
Confidence                                  2349999987654 588999999999999999999999864332111   01011000


Q ss_pred             H--------hhhhhcc----cccCCCc-------hhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          217 K--------RARKLNG----ASCSKFG-------FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       217 ~--------~~~~~~~----~~~~~l~-------~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .        ....+..    ......+       ......+.+++.+|+ +.||.+||++.+++.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l-~~~p~~R~t~~ell~  307 (311)
T cd07866         244 GTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLL-SLDPYKRLTASDALE  307 (311)
T ss_pred             CCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHc-ccCcccCcCHHHHhc
Confidence            0        0000000    0011111       112236889999999 999999999999864

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.82  E-value=6.8e-20  Score=164.26  Aligned_cols=171  Identities=16%  Similarity=0.162  Sum_probs=118.1

Q ss_pred             CcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChh-----cHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           89 NFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQ-----GNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      +|+..+.||+|+||.||+|... +++.||||.+......     ....+..|++++.+++|+||+++++++.+....   
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            4777889999999999999954 6899999998754322     234577899999999999999999887653100   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~  160 (298)
T cd07841          81 FEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMT  160 (298)
T ss_pred             EcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCcccc
Confidence                                                                                            


Q ss_pred             ----Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHH--------hhhhhcccc
Q 045092          160 ----PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLK--------RARKLNGAS  226 (307)
Q Consensus       160 ----t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~--------~~~~~~~~~  226 (307)
                          ++.|+|||.+.+ ..++.++|||||||+++||++|..+|.......   ..........        .........
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (298)
T cd07841         161 HQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID---QLGKIFEALGTPTEENWPGVTSLPDYV  237 (298)
T ss_pred             ccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH---HHHHHHHHcCCCchhhhhhcccccccc
Confidence                456999998864 457899999999999999999977775322111   1110100000        000000000


Q ss_pred             c----CC-----CchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          227 C----SK-----FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       227 ~----~~-----l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .    +.     +....+..+.+++..|+ +.+|.+||++.+++..
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l-~~~P~~R~s~~e~l~~  282 (298)
T cd07841         238 EFKPFPPTPLKQIFPAASDDALDLLQRLL-TLNPNKRITARQALEH  282 (298)
T ss_pred             cccccCCcchhhhcccccHHHHHHHHHHh-cCCcccCcCHHHHhhC
Confidence            0    00     01122347889999999 9999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.82  E-value=1.5e-19  Score=164.69  Aligned_cols=166  Identities=20%  Similarity=0.290  Sum_probs=113.7

Q ss_pred             CcccCC--CCeeEEEEEE-cCCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---------
Q 045092           94 NEISER--GFGPVYRGLL-ADGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---------  159 (307)
Q Consensus        94 ~~lG~G--~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---------  159 (307)
                      ..||+|  +||+||++.. .+++.||||.+....  ....+.+.+|+.++..++|+||+++++++......         
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            456666  9999999995 478999999986432  23346789999999999999999999988643110         


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (328)
T cd08226          84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYD  163 (328)
T ss_pred             CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccccc
Confidence                                                                                            


Q ss_pred             -------CccccchhhhccC--CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHH----------------H
Q 045092          160 -------PIVYMAPEYAKHG--YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLG----------------S  214 (307)
Q Consensus       160 -------t~~y~aPE~~~~~--~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~----------------~  214 (307)
                             +..|+|||++.++  .++.++|||||||+++||++|+.||.......  .+.....                .
T Consensus       164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  241 (328)
T cd08226         164 FPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQ--MLLQKLKGPPYSPLDITTFPCEES  241 (328)
T ss_pred             ccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHH--HHHHHhcCCCCCCccccccchhhh
Confidence                   2349999998764  47899999999999999999999996432111  0000000                0


Q ss_pred             HHHhhh-hh---------c-----cc----ccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          215 YLKRAR-KL---------N-----GA----SCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       215 ~~~~~~-~~---------~-----~~----~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ...... ..         .     ..    ........+...+.+++..|+ +.||++|||+.++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l-~~dP~~Rpta~e~l~  307 (328)
T cd08226         242 RMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCL-QQDPEKRPSASSLLS  307 (328)
T ss_pred             hhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHc-cCCcccCCCHHHHhh
Confidence            000000 00         0     00    011112234557899999999 999999999999975

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.81  E-value=2e-19  Score=159.57  Aligned_cols=169  Identities=18%  Similarity=0.180  Sum_probs=117.4

Q ss_pred             cccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCC-CCCccceeeeeecCCCC-------
Q 045092           90 FASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS-KQGNREIVNEIGMISALQ-HPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~-------  159 (307)
                      |...+.||+|+||.||+|.. .+++.||+|.++... ........+|+.++.++. |+||+++++++.+....       
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            55678899999999999994 478899999986532 222234567999999985 99999999988765110       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~~~~kl~dfg~~~~~~~~~~~~~~~~  160 (282)
T cd07831          81 LMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKDDILKLADFGSCRGIYSKPPYTEYIS  160 (282)
T ss_pred             cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcCCCeEEEecccccccccCCCcCCCCC
Confidence                                                                                            


Q ss_pred             Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHH-----------Hhhhhhccccc
Q 045092          160 PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYL-----------KRARKLNGASC  227 (307)
Q Consensus       160 t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~-----------~~~~~~~~~~~  227 (307)
                      +..|+|||++.. +.++.++|||||||+++||++|+.||......   ..........           .... ......
T Consensus       161 ~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  236 (282)
T cd07831         161 TRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL---DQIAKIHDVLGTPDAEVLKKFRKSR-HMNYNF  236 (282)
T ss_pred             CcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH---HHHHHHHHHcCCCCHHHHHhhcccc-cccccC
Confidence            456999997654 56788999999999999999999999543221   1111111110           0000 000000


Q ss_pred             CC--------CchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          228 SK--------FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       228 ~~--------l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      +.        +....+..+.+++.+|+ +.+|++||++.++++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~li~~~l-~~~P~~R~~~~~~l~~  279 (282)
T cd07831         237 PSKKGTGLRKLLPNASAEGLDLLKKLL-AYDPDERITAKQALRH  279 (282)
T ss_pred             cccccccHHHHcccccHHHHHHHHHHh-ccCcccccCHHHHhhC
Confidence            10        01133568999999999 9999999999998753

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.81  E-value=3e-20  Score=170.28  Aligned_cols=163  Identities=17%  Similarity=0.250  Sum_probs=126.3

Q ss_pred             cCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCCCh--hcHHHHHHHHHHHhhCCCCCccceeeeeecCCC------
Q 045092           88 NNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSK--QGNREIVNEIGMISALQHPNLVKLYRLCTETLK------  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~------  158 (307)
                      .=|++.+.||+|.|+.|-+++ .-+|..||||++.+..-  .....+.+|+..|+-++|||||+||++....-.      
T Consensus        18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE   97 (864)
T KOG4717|consen   18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE   97 (864)
T ss_pred             eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence            347778899999999999999 45899999999975432  234578899999999999999999986543200      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        98 LGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~T  177 (864)
T KOG4717|consen   98 LGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTT  177 (864)
T ss_pred             ecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchhhc
Confidence                                                                                            


Q ss_pred             --CCccccchhhhccCCCC-chhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhccccc--CCCchh
Q 045092          159 --QPIVYMAPEYAKHGYLT-DKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC--SKFGFK  233 (307)
Q Consensus       159 --~t~~y~aPE~~~~~~~~-~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~l~~~  233 (307)
                        +++.|-|||.+.+..|+ ..+||||+|||||.|+.|+.||...+..+..                .-+.|  -.++.-
T Consensus       178 sCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETL----------------TmImDCKYtvPsh  241 (864)
T KOG4717|consen  178 SCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETL----------------TMIMDCKYTVPSH  241 (864)
T ss_pred             ccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhh----------------hhhhcccccCchh
Confidence              07789999999998887 4699999999999999999999765543321                11111  223445


Q ss_pred             hHHHHHHHhccccCCCCCCCCCCHHHHHH--Hhccc
Q 045092          234 FYRRTSDGNDQCSSSVTPTNRPLMSFVVS--MLEDK  267 (307)
Q Consensus       234 ~~~~~~~l~~~C~~~~dP~~RPs~~~vl~--~L~~~  267 (307)
                      ...++.+++..++ ..||.+|.+.++|+.  .|+..
T Consensus       242 vS~eCrdLI~sML-vRdPkkRAslEeI~s~~Wlq~~  276 (864)
T KOG4717|consen  242 VSKECRDLIQSML-VRDPKKRASLEEIVSTSWLQAG  276 (864)
T ss_pred             hhHHHHHHHHHHH-hcCchhhccHHHHhccccccCC
Confidence            5668999999999 999999999999875  35443

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.81  E-value=4.1e-20  Score=159.21  Aligned_cols=153  Identities=20%  Similarity=0.228  Sum_probs=115.8

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChh---cHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQ---GNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      .++|+..+.||.|+||+|.+++. .+|..+|+|+++....-   ..+...+|..+|+.+.||+++++++.+.+....   
T Consensus        43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv  122 (355)
T KOG0616|consen   43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV  122 (355)
T ss_pred             hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence            35677789999999999999995 47899999999765333   345678999999999999999999988775211   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       123 meyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~TlC  202 (355)
T KOG0616|consen  123 MEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWTLC  202 (355)
T ss_pred             EeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCcEEEec
Confidence                                                                                            


Q ss_pred             -CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHH
Q 045092          160 -PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRT  238 (307)
Q Consensus       160 -t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  238 (307)
                       |+-|+|||.+....|+..+|.|||||++|||+.|.+||....+.       .+...+..++       -.++.-+...+
T Consensus       203 GTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~-------~iY~KI~~~~-------v~fP~~fs~~~  268 (355)
T KOG0616|consen  203 GTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPI-------QIYEKILEGK-------VKFPSYFSSDA  268 (355)
T ss_pred             CCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChH-------HHHHHHHhCc-------ccCCcccCHHH
Confidence             99999999999999999999999999999999999999644331       1222222222       12233344466


Q ss_pred             HHHhccccCCCCCCCC
Q 045092          239 SDGNDQCSSSVTPTNR  254 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~R  254 (307)
                      .+++..-+ +.|-.+|
T Consensus       269 kdLl~~LL-~vD~t~R  283 (355)
T KOG0616|consen  269 KDLLKKLL-QVDLTKR  283 (355)
T ss_pred             HHHHHHHH-hhhhHhh
Confidence            66666666 7776666

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.81  E-value=3.9e-20  Score=168.44  Aligned_cols=154  Identities=19%  Similarity=0.177  Sum_probs=111.0

Q ss_pred             CcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHH-HHhhCCCCCccceeeeeecCCCC---------
Q 045092           94 NEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIG-MISALQHPNLVKLYRLCTETLKQ---------  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~~---------  159 (307)
                      +.||+|+||.||++... +++.||+|++....   ......+..|.. ++..++|+||+++++++......         
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            46999999999999954 67889999986432   122234455544 56778999999999887554110         


Q ss_pred             ------------------------------------------------------------------------------Cc
Q 045092          160 ------------------------------------------------------------------------------PI  161 (307)
Q Consensus       160 ------------------------------------------------------------------------------t~  161 (307)
                                                                                                    |+
T Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~  160 (325)
T cd05602          81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTP  160 (325)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCCc
Confidence                                                                                          67


Q ss_pred             cccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHH
Q 045092          162 VYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDG  241 (307)
Q Consensus       162 ~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l  241 (307)
                      .|+|||++.+..++.++|||||||++|||++|+.||.....      .+....... .       ...+....+..+.++
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~i~~-~-------~~~~~~~~~~~~~~l  226 (325)
T cd05602         161 EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT------AEMYDNILN-K-------PLQLKPNITNSARHL  226 (325)
T ss_pred             cccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH------HHHHHHHHh-C-------CcCCCCCCCHHHHHH
Confidence            89999999999999999999999999999999999963321      111111111 1       111223455678899


Q ss_pred             hccccCCCCCCCCCCHHHHHH
Q 045092          242 NDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       242 ~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      +..|+ +.+|.+||++.+.+.
T Consensus       227 i~~~l-~~~p~~R~~~~~~~~  246 (325)
T cd05602         227 LEGLL-QKDRTKRLGAKDDFM  246 (325)
T ss_pred             HHHHc-ccCHHHCCCCCCCHH
Confidence            99999 999999998764443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.81  E-value=9.1e-20  Score=160.15  Aligned_cols=160  Identities=18%  Similarity=0.209  Sum_probs=117.5

Q ss_pred             CcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC-----ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           89 NFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK-----SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      .|.+.+.||+|+||.||++... .+..+++|.++..     .......+..|+.++.+++||||+++++++.+....   
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            3677889999999999999853 3445666655432     122334677899999999999999998765433100   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~~~~l~d~g~~~~~~~~~~  160 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNNLLKIGDFGVSRLLMGSCD  160 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeecCCEeecccCceeecCCCcc
Confidence                                                                                            


Q ss_pred             -------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCch
Q 045092          160 -------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGF  232 (307)
Q Consensus       160 -------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  232 (307)
                             ++.|+|||+..+..++.++|+||||+++++|++|+.|+....      .......       ......+.++.
T Consensus       161 ~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~------~~~~~~~-------~~~~~~~~~~~  227 (260)
T cd08222         161 LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN------FLSVVLR-------IVEGPTPSLPE  227 (260)
T ss_pred             cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc------HHHHHHH-------HHcCCCCCCcc
Confidence                   456999999988888999999999999999999999985221      1111111       11222344455


Q ss_pred             hhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          233 KFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       233 ~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .++..+.+++.+|+ ..+|++||++.++++
T Consensus       228 ~~~~~~~~li~~~l-~~~p~~Rp~~~~il~  256 (260)
T cd08222         228 TYSRQLNSIMQSML-NKDPSLRPSAAEILR  256 (260)
T ss_pred             hhcHHHHHHHHHHh-cCChhhCcCHHHHhh
Confidence            66778999999999 999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.81  E-value=1.9e-19  Score=165.14  Aligned_cols=174  Identities=16%  Similarity=0.211  Sum_probs=120.9

Q ss_pred             HhcCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC----
Q 045092           86 ATNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK----  158 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~----  158 (307)
                      ..++|...+.||+|+||.||++. ..++..||||++...  .......+.+|+.++++++|+||+++++++.....    
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF   92 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence            46789999999999999999998 447899999998543  22234568899999999999999999886643210    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        93 ~~~~lv~e~~~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~  172 (343)
T cd07880          93 HDFYLVMPFMGTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSEM  172 (343)
T ss_pred             ceEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccCc
Confidence                                                                                            


Q ss_pred             ----CCccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHH----------HHHHHhh---h
Q 045092          159 ----QPIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWL----------GSYLKRA---R  220 (307)
Q Consensus       159 ----~t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~----------~~~~~~~---~  220 (307)
                          .++.|+|||++.+ ..++.++||||||+++++|++|+.||.......  .+....          ...+...   .
T Consensus       173 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (343)
T cd07880         173 TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLD--QLMEIMKVTGTPSKEFVQKLQSEDAKN  250 (343)
T ss_pred             cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHhcCCCCHHHHHhhcchhHHH
Confidence                0567999998876 458899999999999999999999996432110  000000          0000000   0


Q ss_pred             ---hhcccccCC---CchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          221 ---KLNGASCSK---FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       221 ---~~~~~~~~~---l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                         .+.......   +....+..+.+++.+|+ +.||++||++.+++.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l-~~dP~~R~t~~~~l~  297 (343)
T cd07880         251 YVKKLPRFRKKDFRSLLPNANPLAVNVLEKML-VLDAESRITAAEALA  297 (343)
T ss_pred             HHHhccccCcchHHHhccCCChHHHHHHHHHc-CCChhhCCCHHHHhc
Confidence               000000001   11123446889999999 999999999999874

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.81  E-value=5.6e-21  Score=190.43  Aligned_cols=168  Identities=24%  Similarity=0.370  Sum_probs=132.2

Q ss_pred             HHHHhcCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-
Q 045092           83 IKAATNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-  158 (307)
Q Consensus        83 l~~~t~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-  158 (307)
                      +...+-++....+||.|.||.||-|. .++|...|+|.++..  .........+|..++..++|||+|++||.-.+... 
T Consensus      1230 lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv 1309 (1509)
T KOG4645|consen 1230 LSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKV 1309 (1509)
T ss_pred             hccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHH
Confidence            45556778889999999999999999 678999999987643  23334578899999999999999999986443310 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus      1310 ~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~ 1389 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQ 1389 (1509)
T ss_pred             HHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchh
Confidence                                                                                            


Q ss_pred             ----------CCccccchhhhccCC---CCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhccc
Q 045092          159 ----------QPIVYMAPEYAKHGY---LTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGA  225 (307)
Q Consensus       159 ----------~t~~y~aPE~~~~~~---~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  225 (307)
                                +|+.|||||.+.+..   ..-+.||||+|||++||+||++||...+.       +|+..+.     +...
T Consensus      1390 ~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn-------e~aIMy~-----V~~g 1457 (1509)
T KOG4645|consen 1390 TMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN-------EWAIMYH-----VAAG 1457 (1509)
T ss_pred             cCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc-------hhHHHhH-----Hhcc
Confidence                      099999999997533   45679999999999999999999953321       2222211     4455


Q ss_pred             ccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          226 SCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       226 ~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ..|.++.....+-.+++..|+ ..||..|.++.|+++.
T Consensus      1458 h~Pq~P~~ls~~g~dFle~Cl-~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1458 HKPQIPERLSSEGRDFLEHCL-EQDPKMRWTASQLLEH 1494 (1509)
T ss_pred             CCCCCchhhhHhHHHHHHHHH-hcCchhhhHHHHHHHh
Confidence            577888778888999999999 9999999999988764

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.81  E-value=2.8e-19  Score=157.22  Aligned_cols=156  Identities=20%  Similarity=0.248  Sum_probs=116.8

Q ss_pred             ccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------------
Q 045092           96 ISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------------  159 (307)
Q Consensus        96 lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------------  159 (307)
                      ||.|+||.||++... +++.||+|.+....   ....+.+.+|+.++++++|+||+++++++.++...            
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            799999999999954 58899999986432   23346799999999999999999999987654211            


Q ss_pred             --------------------------------------------------------------------------Cccccc
Q 045092          160 --------------------------------------------------------------------------PIVYMA  165 (307)
Q Consensus       160 --------------------------------------------------------------------------t~~y~a  165 (307)
                                                                                                +..|++
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~  160 (262)
T cd05572          81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVA  160 (262)
T ss_pred             HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcCccC
Confidence                                                                                      457999


Q ss_pred             hhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccc
Q 045092          166 PEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQC  245 (307)
Q Consensus       166 PE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C  245 (307)
                      ||++....++.++|+||||+++|+|++|..|+.......    .+......      ........+...+..+.+++..|
T Consensus       161 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~------~~~~~~~~~~~~~~~~~~~i~~~  230 (262)
T cd05572         161 PEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP----MEIYNDIL------KGNGKLEFPNYIDKAAKDLIKQL  230 (262)
T ss_pred             hhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH----HHHHHHHh------ccCCCCCCCcccCHHHHHHHHHH
Confidence            999988889999999999999999999999996443211    11111111      01112223333466899999999


Q ss_pred             cCCCCCCCCCC-----HHHHHH
Q 045092          246 SSSVTPTNRPL-----MSFVVS  262 (307)
Q Consensus       246 ~~~~dP~~RPs-----~~~vl~  262 (307)
                      + +.+|++||+     +.|+++
T Consensus       231 l-~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         231 L-RRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             c-cCChhhCcCCcccCHHHHhc
Confidence            9 999999999     666654

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.81  E-value=4.5e-19  Score=157.62  Aligned_cols=166  Identities=19%  Similarity=0.263  Sum_probs=116.6

Q ss_pred             cccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh--hcHHHHHHHHHHHhhC---CCCCccceeeeeecCCC-----
Q 045092           90 FASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK--QGNREIVNEIGMISAL---QHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~g~~~~~~~-----  158 (307)
                      |+..+.||+|+||.||+|... +++.||+|.+.....  .....+.+|+.++.++   +|+||+++++++.....     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            566789999999999999965 589999999864322  2234567788877766   59999999998765422     


Q ss_pred             C-------------------------------------------------------------------------------
Q 045092          159 Q-------------------------------------------------------------------------------  159 (307)
Q Consensus       159 ~-------------------------------------------------------------------------------  159 (307)
                      .                                                                               
T Consensus        81 ~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~  160 (287)
T cd07838          81 LTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFE  160 (287)
T ss_pred             eEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCC
Confidence            0                                                                               


Q ss_pred             --------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhh-----------
Q 045092          160 --------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRAR-----------  220 (307)
Q Consensus       160 --------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~-----------  220 (307)
                              +..|+|||++.+..++.++|||||||+++||++|+.|+......      +..........           
T Consensus       161 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~  234 (287)
T cd07838         161 MALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA------DQLDKIFDVIGLPSEEEWPRNV  234 (287)
T ss_pred             cccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH------HHHHHHHHHcCCCChHhcCCCc
Confidence                    44699999999999999999999999999999999988643221      11111111000           


Q ss_pred             -----hhcccccCCC---chhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          221 -----KLNGASCSKF---GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       221 -----~~~~~~~~~l---~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                           ..........   ....+..+.+++.+|+ +.||.+||++.+++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l-~~dp~~Rp~~~~il~  283 (287)
T cd07838         235 SLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKML-TFNPHKRISAFEALQ  283 (287)
T ss_pred             ccchhhcccccccchhhhhhhhhHHHHHHHHHHh-ccCCccCCCHHHHhc
Confidence                 0000000100   0122346788999999 999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.81  E-value=3.7e-19  Score=159.12  Aligned_cols=168  Identities=16%  Similarity=0.161  Sum_probs=117.7

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC--hhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS--KQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~-----  158 (307)
                      ++|+..+.||+|+||.||+|.. .+++.||||.+....  ......+.+|+.++.++ +|+||+++++++.....     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            4688899999999999999995 478999999876432  22345788999999999 56999999986653211     


Q ss_pred             -----------------------C--------------------------------------------------------
Q 045092          159 -----------------------Q--------------------------------------------------------  159 (307)
Q Consensus       159 -----------------------~--------------------------------------------------------  159 (307)
                                             .                                                        
T Consensus        81 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~  160 (295)
T cd07837          81 LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRA  160 (295)
T ss_pred             EEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeeccccee
Confidence                                   0                                                        


Q ss_pred             -------------Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHh-hh----
Q 045092          160 -------------PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKR-AR----  220 (307)
Q Consensus       160 -------------t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~-~~----  220 (307)
                                   ++.|+|||++.+ ..++.++||||||+++|+|++|..||.......      ........ +.    
T Consensus       161 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~  234 (295)
T cd07837         161 FSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ------QLLHIFKLLGTPTEQ  234 (295)
T ss_pred             cCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH------HHHHHHHHhCCCChh
Confidence                         345999998865 457899999999999999999999985422111      11111100 00    


Q ss_pred             ------h------hcccccCC---CchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          221 ------K------LNGASCSK---FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       221 ------~------~~~~~~~~---l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                            .      ........   .....+.++.+++..|+ ..||.+||++.+++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l-~~~P~~R~~~~eil~  290 (295)
T cd07837         235 VWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKML-RYDPAKRISAKAALT  290 (295)
T ss_pred             hCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHc-cCChhhcCCHHHHhc
Confidence                  0      00000000   01124457889999999 999999999999875

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.81  E-value=9.6e-20  Score=159.27  Aligned_cols=172  Identities=19%  Similarity=0.246  Sum_probs=116.9

Q ss_pred             cCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCCChhc--HHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQG--NREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      ++|+..+.|++|.||.||+|+ ..+++.||+|+++......  .-.-++||.+|.+++|||||.+-.+.....-.     
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V  155 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV  155 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence            456677999999999999999 4588999999998653221  22468999999999999999987665433100     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       156 Me~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T  235 (419)
T KOG0663|consen  156 MEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYT  235 (419)
T ss_pred             HHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCcccCc
Confidence                                                                                            


Q ss_pred             ----Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhh-hhcc---------
Q 045092          160 ----PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRAR-KLNG---------  224 (307)
Q Consensus       160 ----t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~-~~~~---------  224 (307)
                          |..|.|||.+.+ ..|++.+|+||+|||+.||+++++-|.+....+   ..+.+...+.... .+..         
T Consensus       236 ~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~d---Ql~~If~llGtPte~iwpg~~~lp~~k  312 (419)
T KOG0663|consen  236 PLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEID---QLDKIFKLLGTPSEAIWPGYSELPAVK  312 (419)
T ss_pred             ceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHH---HHHHHHHHhCCCccccCCCccccchhh
Confidence                889999998876 469999999999999999999998875433222   1222222221100 0000         


Q ss_pred             -c---------ccCCCchh-hHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          225 -A---------SCSKFGFK-FYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       225 -~---------~~~~l~~~-~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                       .         ....++.. ....-.++....+ ..||.+|-|+++.++.
T Consensus       313 ~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~ll-t~dP~kR~tA~~~L~h  361 (419)
T KOG0663|consen  313 KMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLL-TYDPGKRITAEDGLKH  361 (419)
T ss_pred             ccccCCCCchhhhhhccccccchhHHHHHHHHh-ccCccccccHHHhhcc
Confidence             0         00011000 1234556666667 8899999999998753

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.80  E-value=3.2e-19  Score=158.45  Aligned_cols=156  Identities=21%  Similarity=0.230  Sum_probs=113.8

Q ss_pred             ccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------------
Q 045092           96 ISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------------  159 (307)
Q Consensus        96 lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------------  159 (307)
                      ||+|+||.||++.. .+++.||+|.+....   ......+.+|+.++.+++|+||+++++.+......            
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            69999999999984 478999999986432   22344678899999999999999998876543100            


Q ss_pred             ----------------------------------------------------------------------------Cccc
Q 045092          160 ----------------------------------------------------------------------------PIVY  163 (307)
Q Consensus       160 ----------------------------------------------------------------------------t~~y  163 (307)
                                                                                                  +..|
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y  160 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGY  160 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCCc
Confidence                                                                                        4579


Q ss_pred             cchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhc
Q 045092          164 MAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGND  243 (307)
Q Consensus       164 ~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~  243 (307)
                      +|||++.++.++.++||||||+++++|++|+.||........   ...+..    .   .......++..++..+.+++.
T Consensus       161 ~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~----~---~~~~~~~~~~~~~~~~~~li~  230 (277)
T cd05577         161 MAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE---KEELKR----R---TLEMAVEYPDKFSPEAKDLCE  230 (277)
T ss_pred             CCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccccc---HHHHHh----c---cccccccCCccCCHHHHHHHH
Confidence            999999888899999999999999999999999964332111   000100    0   011122233445668899999


Q ss_pred             cccCCCCCCCCC-----CHHHHHH
Q 045092          244 QCSSSVTPTNRP-----LMSFVVS  262 (307)
Q Consensus       244 ~C~~~~dP~~RP-----s~~~vl~  262 (307)
                      .|+ +.+|.+||     ++.+++.
T Consensus       231 ~~l-~~~p~~R~~~~~~~~~~ll~  253 (277)
T cd05577         231 ALL-QKDPEKRLGCRGGSADEVRE  253 (277)
T ss_pred             HHc-cCChhHccCCCcccHHHHHh
Confidence            999 99999999     5555653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.80  E-value=7.1e-20  Score=166.37  Aligned_cols=150  Identities=21%  Similarity=0.176  Sum_probs=109.6

Q ss_pred             CcccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHH-HHhhCCCCCccceeeeeecCCCC---------
Q 045092           94 NEISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIG-MISALQHPNLVKLYRLCTETLKQ---------  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~~---------  159 (307)
                      +.||+|+||.||++.. .+++.||+|.+....   ......+.+|.. ++..++|+||+++++++.+....         
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4699999999999995 478899999986432   122344555654 57788999999999876543100         


Q ss_pred             ------------------------------------------------------------------------------Cc
Q 045092          160 ------------------------------------------------------------------------------PI  161 (307)
Q Consensus       160 ------------------------------------------------------------------------------t~  161 (307)
                                                                                                    |+
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (321)
T cd05603          81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTP  160 (321)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCCc
Confidence                                                                                          67


Q ss_pred             cccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHH
Q 045092          162 VYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDG  241 (307)
Q Consensus       162 ~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l  241 (307)
                      .|+|||.+.+..++.++|||||||++|||++|+.||.....      ...... +...       ...++......+.++
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~-i~~~-------~~~~~~~~~~~~~~l  226 (321)
T cd05603         161 EYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV------SQMYDN-ILHK-------PLQLPGGKTVAACDL  226 (321)
T ss_pred             ccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH------HHHHHH-HhcC-------CCCCCCCCCHHHHHH
Confidence            89999999988999999999999999999999999964321      111111 1110       122333455688899


Q ss_pred             hccccCCCCCCCCCCHH
Q 045092          242 NDQCSSSVTPTNRPLMS  258 (307)
Q Consensus       242 ~~~C~~~~dP~~RPs~~  258 (307)
                      +..|+ +.||.+||+..
T Consensus       227 i~~~l-~~~p~~R~~~~  242 (321)
T cd05603         227 LVGLL-HKDQRRRLGAK  242 (321)
T ss_pred             HHHHc-cCCHhhcCCCC
Confidence            99999 99999999753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.80  E-value=3.1e-20  Score=173.82  Aligned_cols=157  Identities=16%  Similarity=0.266  Sum_probs=116.8

Q ss_pred             CCcccCCCCeeEEEEEE-cCCCEEEEEEcc----CCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--------
Q 045092           93 ENEISERGFGPVYRGLL-ADGKVIEVKQLS----SKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--------  159 (307)
Q Consensus        93 ~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~----~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--------  159 (307)
                      ..+||+|+|-+||+|.. .+|..||--.++    ..+....+.|..|+.+|+.|+|+|||++|.+..+....        
T Consensus        45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL  124 (632)
T KOG0584|consen   45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL  124 (632)
T ss_pred             hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence            36799999999999994 367778743332    12345567899999999999999999999988776332        


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       125 ~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aksv  204 (632)
T KOG0584|consen  125 FTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKSV  204 (632)
T ss_pred             ccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcccccee
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHH
Q 045092          160 --PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRR  237 (307)
Q Consensus       160 --t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  237 (307)
                        ||-|||||... ..|+..+|||||||+++||+|+..||.......      .+...+..|.     ....+..--..+
T Consensus       205 IGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~A------QIYKKV~SGi-----KP~sl~kV~dPe  272 (632)
T KOG0584|consen  205 IGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPA------QIYKKVTSGI-----KPAALSKVKDPE  272 (632)
T ss_pred             ccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHH------HHHHHHHcCC-----CHHHhhccCCHH
Confidence              99999999877 679999999999999999999999996544321      1222222221     011111111338


Q ss_pred             HHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          238 TSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       238 ~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      +.+++..|+ .. ...||++.++++.
T Consensus       273 vr~fIekCl-~~-~~~R~sa~eLL~d  296 (632)
T KOG0584|consen  273 VREFIEKCL-AT-KSERLSAKELLKD  296 (632)
T ss_pred             HHHHHHHHh-cC-chhccCHHHHhhC
Confidence            999999999 77 9999999999863

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.80  E-value=1.8e-19  Score=164.05  Aligned_cols=171  Identities=18%  Similarity=0.205  Sum_probs=121.7

Q ss_pred             CcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCC-----CC-
Q 045092           89 NFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETL-----KQ-  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-----~~-  159 (307)
                      +|...+.||+|+||.||+|... ++..||||.+....  ....+.+.+|+.+++.++|+||+++++++....     .. 
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            4778899999999999999954 58999999987543  334567999999999999999999998765542     00 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~  160 (330)
T cd07834          81 IVTELMETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEK  160 (330)
T ss_pred             EEecchhhhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccccccc
Confidence                                                                                            


Q ss_pred             --------CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHh----------hh
Q 045092          160 --------PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKR----------AR  220 (307)
Q Consensus       160 --------t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~----------~~  220 (307)
                              +..|+|||.+.+. .++.++||||||+++++|++|+.||......+.   ...+......          ..
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~  237 (330)
T cd07834         161 GFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQ---LNLIVEVLGTPSEEDLKFITSE  237 (330)
T ss_pred             ccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHH---HHHHHHhcCCCChhHhhhcccc
Confidence                    4459999999877 789999999999999999999999964332110   0000000000          00


Q ss_pred             hhccc-------cc---CCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          221 KLNGA-------SC---SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       221 ~~~~~-------~~---~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .....       ..   ..+....+..+.+++.+|+ +.+|.+||++.+++..
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l-~~~P~~Rpt~~~ll~~  289 (330)
T cd07834         238 KARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKML-VFDPKKRITADEALAH  289 (330)
T ss_pred             chhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHc-cCChhhCCCHHHHHhC
Confidence            00000       00   0011123457889999999 9999999999999863

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.80  E-value=1.9e-19  Score=173.34  Aligned_cols=175  Identities=14%  Similarity=0.175  Sum_probs=112.3

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEEc--CCCEEEEEEcc-----------------CCChhcHHHHHHHHHHHhhCCCCCc
Q 045092           86 ATNNFASENEISERGFGPVYRGLLA--DGKVIEVKQLS-----------------SKSKQGNREIVNEIGMISALQHPNL  146 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~~--~~~~vAvK~~~-----------------~~~~~~~~~~~~E~~~l~~l~h~ni  146 (307)
                      ..++|.+.+.||+|+||.||++...  .+..+++|.+.                 .........+.+|+.+|.+++|+||
T Consensus       146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI  225 (501)
T PHA03210        146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI  225 (501)
T ss_pred             hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence            3578999999999999999998743  22222222110                 1112234568899999999999999


Q ss_pred             cceeeeeecCCC--------------------------------------------------------------------
Q 045092          147 VKLYRLCTETLK--------------------------------------------------------------------  158 (307)
Q Consensus       147 v~l~g~~~~~~~--------------------------------------------------------------------  158 (307)
                      +++++++.....                                                                    
T Consensus       226 v~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~  305 (501)
T PHA03210        226 LKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGK  305 (501)
T ss_pred             CcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC
Confidence            999987644310                                                                    


Q ss_pred             ------------------------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcC-CCccCcccHHHHHH
Q 045092          159 ------------------------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVIC-RTKEDKFYLLDWLG  213 (307)
Q Consensus       159 ------------------------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~-~~~~~~~~l~~~~~  213 (307)
                                              +|..|+|||++.+..++.++|||||||++|||++|..++.. ........+...+.
T Consensus       306 vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~  385 (501)
T PHA03210        306 IVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIID  385 (501)
T ss_pred             EEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHH
Confidence                                    07889999999999999999999999999999998754322 21111111111111


Q ss_pred             -----------------HHHHhhhhhcccccCCCc-----hhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          214 -----------------SYLKRARKLNGASCSKFG-----FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       214 -----------------~~~~~~~~~~~~~~~~l~-----~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                                       ..+.... +.. ....++     ...+..+.+++.+|+ +.||.+||++.|++..
T Consensus       386 ~~~~~~~~~p~~~~~~~~~i~~~~-~~~-~~~~~~~~~~~~~~~~~~~~li~kmL-~~DP~~Rpsa~elL~h  454 (501)
T PHA03210        386 SLSVCDEEFPDPPCKLFDYIDSAE-IDH-AGHSVPPLIRNLGLPADFEYPLVKML-TFDWHLRPGAAELLAL  454 (501)
T ss_pred             hcccChhhcCCcHHHHHHHhhhhh-ccc-CccchhhHHHhcCCChHHHHHHHHHh-ccCcccCcCHHHHhhC
Confidence                             0000000 000 000000     012235677788999 9999999999999863

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.80  E-value=7.7e-20  Score=163.45  Aligned_cols=160  Identities=18%  Similarity=0.261  Sum_probs=123.9

Q ss_pred             cCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           88 NNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      ..|++.+.||+|.||+|-++. ...|+.||||.+++.   +.++.-.+.+||++|+.|+||||+++|++|...+..    
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM  132 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM  132 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence            457778999999999999999 568999999998754   455666789999999999999999999988765221    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       133 EYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqTF  212 (668)
T KOG0611|consen  133 EYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQTF  212 (668)
T ss_pred             EecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccccHHHHh
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCCCC-chhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 --PIVYMAPEYAKHGYLT-DKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 --t~~y~aPE~~~~~~~~-~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                        ++.|..||.+.+..|. ..+|.||+||+||.|+.|..||++.+.   ..+    ...+..|. ..+.-       .+.
T Consensus       213 CGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh---k~l----vrQIs~Ga-YrEP~-------~PS  277 (668)
T KOG0611|consen  213 CGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH---KRL----VRQISRGA-YREPE-------TPS  277 (668)
T ss_pred             cCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH---HHH----HHHhhccc-ccCCC-------CCc
Confidence              8889999999988775 679999999999999999999975442   222    22223332 11111       122


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ....++..++ ..||++|.|+.+|...
T Consensus       278 dA~gLIRwmL-mVNP~RRATieDiAsH  303 (668)
T KOG0611|consen  278 DASGLIRWML-MVNPERRATIEDIASH  303 (668)
T ss_pred             hHHHHHHHHH-hcCcccchhHHHHhhh
Confidence            4556777788 8999999999998764

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.80  E-value=1.4e-20  Score=159.90  Aligned_cols=171  Identities=19%  Similarity=0.215  Sum_probs=124.3

Q ss_pred             CcccHHHHHHHhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhC-CCCCccceeee
Q 045092           76 GSFHLRQIKAATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS-KQGNREIVNEIGMISAL-QHPNLVKLYRL  152 (307)
Q Consensus        76 ~~~~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~  152 (307)
                      ..|+-..|+.       ...||.|+||+|+|-.+ +.|+..|||++.... ....++++.|.+...+- +.||||++||.
T Consensus        59 ~~F~~~~Lqd-------lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa  131 (361)
T KOG1006|consen   59 HTFTSDNLQD-------LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGA  131 (361)
T ss_pred             cccccchHHH-------HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhh
Confidence            4465545543       47899999999999985 489999999997543 34567899999877666 78999999998


Q ss_pred             eecCCCC-------------------------------------------------------------------------
Q 045092          153 CTETLKQ-------------------------------------------------------------------------  159 (307)
Q Consensus       153 ~~~~~~~-------------------------------------------------------------------------  159 (307)
                      +......                                                                         
T Consensus       132 ~F~EGdcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCD  211 (361)
T KOG1006|consen  132 LFSEGDCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCD  211 (361)
T ss_pred             hhcCCceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeec
Confidence            7654111                                                                         


Q ss_pred             ------------------Cccccchhhhcc-C-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhh
Q 045092          160 ------------------PIVYMAPEYAKH-G-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRA  219 (307)
Q Consensus       160 ------------------t~~y~aPE~~~~-~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~  219 (307)
                                        -..|||||-+.. + .|+-+|||||+|++|+|++||+.|+..     -.++.+.+.......
T Consensus       212 FGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~-----w~svfeql~~Vv~gd  286 (361)
T KOG1006|consen  212 FGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRK-----WDSVFEQLCQVVIGD  286 (361)
T ss_pred             ccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcch-----HHHHHHHHHHHHcCC
Confidence                              556999998863 3 389999999999999999999999952     223444443333221


Q ss_pred             hhhcccccCCC-chhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          220 RKLNGASCSKF-GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       220 ~~~~~~~~~~l-~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .   ..+.... ...+...+..++..|+ -.|...||+..++.+
T Consensus       287 p---p~l~~~~~~~~~s~~~~~fintCl-~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  287 P---PILLFDKECVHYSFSMVRFINTCL-IKDRSDRPKYDDLKK  326 (361)
T ss_pred             C---CeecCcccccccCHHHHHHHHHHh-hcccccCcchhhhhc
Confidence            1   1111111 2235568999999999 999999999988754

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.80  E-value=3e-19  Score=161.33  Aligned_cols=166  Identities=17%  Similarity=0.239  Sum_probs=111.2

Q ss_pred             CCcccCCCCeeEEEEEEcCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----------
Q 045092           93 ENEISERGFGPVYRGLLADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----------  159 (307)
Q Consensus        93 ~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----------  159 (307)
                      .+.+|.|+++.||++.. +++.||||+++..  .....+.+.+|+.++++++|+||+++++++.+....           
T Consensus         7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~   85 (314)
T cd08216           7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS   85 (314)
T ss_pred             hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence            34455666666666654 7899999998654  344567899999999999999999999876643110           


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        86 l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~  165 (314)
T cd08216          86 CEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFP  165 (314)
T ss_pred             HHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccccccccccc
Confidence                                                                                            


Q ss_pred             -----Cccccchhhhcc--CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHH----HHhhh------hh
Q 045092          160 -----PIVYMAPEYAKH--GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSY----LKRAR------KL  222 (307)
Q Consensus       160 -----t~~y~aPE~~~~--~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~----~~~~~------~~  222 (307)
                           +..|+|||++..  ..++.++|||||||+++||++|+.||.......  .+.+.....    +....      ..
T Consensus       166 ~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (314)
T cd08216         166 KSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ--MLLEKVRGTVPCLLDKSTYPLYEDSM  243 (314)
T ss_pred             ccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhccCccccccCchhhhcCCc
Confidence                 346999999875  358899999999999999999999996432111  111100000    00000      00


Q ss_pred             c------------ccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          223 N------------GASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       223 ~------------~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .            ..........+..++.+++..|| +.||++||++.++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l-~~~P~~Rpt~~~ll~  294 (314)
T cd08216         244 SQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCL-QRDPESRPSASQLLN  294 (314)
T ss_pred             CcccccccccchhhhhhcchhhHHHHHHHHHHHHHh-hcCCCcCcCHHHHhc
Confidence            0            00111112233447888999999 999999999999976

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.80  E-value=1.3e-19  Score=170.71  Aligned_cols=109  Identities=20%  Similarity=0.278  Sum_probs=92.7

Q ss_pred             CcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCC-C-----CCccceeeeeecCCCC--
Q 045092           89 NFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISALQ-H-----PNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~g~~~~~~~~--  159 (307)
                      .|.+.+.||+|.||.|-+|. ..+++.||||++++. ..-..+-..|+.+|..++ |     -|+|++++++....+.  
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci  265 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI  265 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence            47889999999999999999 558999999999765 344556778999999996 4     3999999998765322  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       266 VfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~v  345 (586)
T KOG0667|consen  266 VFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRV  345 (586)
T ss_pred             eehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCcc
Confidence                                                                                            


Q ss_pred             -----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCc
Q 045092          160 -----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVI  198 (307)
Q Consensus       160 -----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~  198 (307)
                           +..|.|||++.+..|+.+.||||||||+.||++|.+-|.
T Consensus       346 ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfp  389 (586)
T KOG0667|consen  346 YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFP  389 (586)
T ss_pred             eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccC
Confidence                 788999999999999999999999999999999965554

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.79  E-value=2.5e-19  Score=158.93  Aligned_cols=169  Identities=19%  Similarity=0.240  Sum_probs=118.3

Q ss_pred             cccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           90 FASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      |+..+.||+|+||.||+|... +++.||+|.+....  ....+.+..|+.++++++|+||+++++++.+....       
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            456688999999999999954 68999999987643  23346788999999999999999999876543100       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~  160 (282)
T cd07829          81 DMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVV  160 (282)
T ss_pred             CcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCcccc
Confidence                                                                                            


Q ss_pred             CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHH--------hhhhh-------c
Q 045092          160 PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLK--------RARKL-------N  223 (307)
Q Consensus       160 t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~--------~~~~~-------~  223 (307)
                      +..|+|||.+.++ .++.++|||||||+++||++|+.||.......   ....+.....        .....       .
T Consensus       161 ~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (282)
T cd07829         161 TLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEID---QLFKIFQILGTPTEESWPGVTKLPDYKPTFP  237 (282)
T ss_pred             CcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHH---HHHHHHHHhCCCcHHHHHhhccccccccccc
Confidence            4569999998776 78999999999999999999999985432111   0111110000        00000       0


Q ss_pred             ccccCCC---chhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          224 GASCSKF---GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       224 ~~~~~~l---~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .......   -...+..+.+++..|+ ..||++||++.+++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~i~~~l-~~~P~~Rp~~~~~l~  278 (282)
T cd07829         238 KFPPKDLEKVLPRLDPEGIDLLSKML-QYNPAKRISAKEALK  278 (282)
T ss_pred             ccCccchHHhcccccHHHHHHHHHhh-ccCcccCCCHHHHhh
Confidence            0000000   0112447899999999 999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.79  E-value=2.5e-19  Score=163.66  Aligned_cols=166  Identities=14%  Similarity=0.125  Sum_probs=115.5

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      ++|...+.||+|+||.||++... +++.+|+|.+...   .......+.+|+.++..++|+||+++++++.+....    
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            47888999999999999999954 6788999998532   122234588999999999999999998877554110    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~  160 (332)
T cd05623          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS  160 (332)
T ss_pred             eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCccee
Confidence                                                                                            


Q ss_pred             -----Cccccchhhhc-----cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC
Q 045092          160 -----PIVYMAPEYAK-----HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK  229 (307)
Q Consensus       160 -----t~~y~aPE~~~-----~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  229 (307)
                           |+.|+|||++.     .+.++.++|||||||++|||++|+.||....      ............   .....+.
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~------~~~~~~~i~~~~---~~~~~p~  231 (332)
T cd05623         161 SVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES------LVETYGKIMNHK---ERFQFPA  231 (332)
T ss_pred             cccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC------HHHHHHHHhCCC---ccccCCC
Confidence                 67899999986     3568899999999999999999999996322      111111111110   0111111


Q ss_pred             CchhhHHHHHHHhccccCCCCCC--CCCCHHHHHHH
Q 045092          230 FGFKFYRRTSDGNDQCSSSVTPT--NRPLMSFVVSM  263 (307)
Q Consensus       230 l~~~~~~~~~~l~~~C~~~~dP~--~RPs~~~vl~~  263 (307)
                      .....+..+.+++.+|+ ..++.  .|+++.++++.
T Consensus       232 ~~~~~s~~~~~li~~ll-~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         232 QVTDVSEDAKDLIRRLI-CSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             ccccCCHHHHHHHHHHc-cChhhhcCCCCHHHHhCC
Confidence            12234556777777766 54444  47889988765

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.79  E-value=8.4e-20  Score=168.59  Aligned_cols=163  Identities=17%  Similarity=0.153  Sum_probs=115.6

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      ++|+..+.||+|+||.||++.. .+++.||||.+....   ......+.+|+.++.+++|+||+++++.+.+...     
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            4688899999999999999995 478999999986432   2334578899999999999999999987654310     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~  160 (360)
T cd05627          81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFY  160 (360)
T ss_pred             eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccc
Confidence                                                                                            


Q ss_pred             -------------------------------------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCC
Q 045092          159 -------------------------------------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRT  201 (307)
Q Consensus       159 -------------------------------------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~  201 (307)
                                                           +|+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~  240 (360)
T cd05627         161 RNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET  240 (360)
T ss_pred             cccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCC
Confidence                                                 1346999999999999999999999999999999999996433


Q ss_pred             ccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCC---HHHHHH
Q 045092          202 KEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPL---MSFVVS  262 (307)
Q Consensus       202 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs---~~~vl~  262 (307)
                      ...      .... +.... ......+.  ...+.+..+++.+++ . ||.+|++   +.++++
T Consensus       241 ~~~------~~~~-i~~~~-~~~~~p~~--~~~s~~~~~li~~l~-~-~p~~R~~~~~~~ei~~  292 (360)
T cd05627         241 PQE------TYRK-VMNWK-ETLVFPPE--VPISEKAKDLILRFC-T-DSENRIGSNGVEEIKS  292 (360)
T ss_pred             HHH------HHHH-HHcCC-CceecCCC--CCCCHHHHHHHHHhc-c-ChhhcCCCCCHHHHhc
Confidence            211      1111 11100 00001111  123446777777765 4 8999985   566654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.79  E-value=8.6e-19  Score=160.05  Aligned_cols=171  Identities=15%  Similarity=0.166  Sum_probs=116.0

Q ss_pred             cCccc-CCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhc--------------HHHHHHHHHHHhhCCCCCccceee
Q 045092           88 NNFAS-ENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQG--------------NREIVNEIGMISALQHPNLVKLYR  151 (307)
Q Consensus        88 ~~f~~-~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~l~g  151 (307)
                      +.|.. .+.||+|+||.||+|.. .+++.||||.++......              ...+.+|++++.+++|+||+++++
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   87 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD   87 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence            44543 46799999999999994 478999999886432211              125789999999999999999998


Q ss_pred             eeecCCCC------------------------------------------------------------------------
Q 045092          152 LCTETLKQ------------------------------------------------------------------------  159 (307)
Q Consensus       152 ~~~~~~~~------------------------------------------------------------------------  159 (307)
                      ++......                                                                        
T Consensus        88 ~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~  167 (335)
T PTZ00024         88 VYVEGDFINLVMDIMASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLAR  167 (335)
T ss_pred             EEecCCcEEEEEeccccCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCcccee
Confidence            86543110                                                                        


Q ss_pred             ----------------------------CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHH
Q 045092          160 ----------------------------PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLD  210 (307)
Q Consensus       160 ----------------------------t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~  210 (307)
                                                  +..|+|||++.+. .++.++|||||||+++||++|+.||......+   ...
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~---~~~  244 (335)
T PTZ00024        168 RYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID---QLG  244 (335)
T ss_pred             ecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHH
Confidence                                        2359999988764 47899999999999999999999986433211   111


Q ss_pred             HHHHHHHhhhh--h------------cccccCCC---chhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          211 WLGSYLKRARK--L------------NGASCSKF---GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       211 ~~~~~~~~~~~--~------------~~~~~~~l---~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .+...+.....  .            .....+.+   ....+..+.+++..|+ +.+|++||++.+++.
T Consensus       245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l-~~~P~~R~s~~~~l~  312 (335)
T PTZ00024        245 RIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLL-KLNPLERISAKEALK  312 (335)
T ss_pred             HHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHc-CCCchhccCHHHHhc
Confidence            11111100000  0            00000101   1122447889999999 999999999999985

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=6.4e-19  Score=154.77  Aligned_cols=161  Identities=17%  Similarity=0.130  Sum_probs=112.8

Q ss_pred             CcccCCCCeeEEEEEE-cCCCEEEEEEccCCCh---hcHHHHHHHHHHH-hhCCCCCccceeeeeecCCCC---------
Q 045092           94 NEISERGFGPVYRGLL-ADGKVIEVKQLSSKSK---QGNREIVNEIGMI-SALQHPNLVKLYRLCTETLKQ---------  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~---~~~~~~~~E~~~l-~~l~h~niv~l~g~~~~~~~~---------  159 (307)
                      +.||+|+||.||+|.. .+++.||||.+.....   .....+..|..++ ...+|+|++++++++......         
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            5699999999999985 4688999999865322   2223455565544 445899999999887653100         


Q ss_pred             --------------------------------------------------------------------------Cccccc
Q 045092          160 --------------------------------------------------------------------------PIVYMA  165 (307)
Q Consensus       160 --------------------------------------------------------------------------t~~y~a  165 (307)
                                                                                                +..|++
T Consensus        82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~~  161 (260)
T cd05611          82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYLA  161 (260)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcCccC
Confidence                                                                                      567999


Q ss_pred             hhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccc
Q 045092          166 PEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQC  245 (307)
Q Consensus       166 PE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C  245 (307)
                      ||.+.++.++.++||||||++++||++|..||......      . ....+..+. .  .........++..+.+++..|
T Consensus       162 pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~-~~~~~~~~~-~--~~~~~~~~~~~~~~~~~i~~~  231 (260)
T cd05611         162 PETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD------A-VFDNILSRR-I--NWPEEVKEFCSPEAVDLINRL  231 (260)
T ss_pred             hhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH------H-HHHHHHhcc-c--CCCCcccccCCHHHHHHHHHH
Confidence            99998888999999999999999999999999533211      1 111111111 0  112222234566899999999


Q ss_pred             cCCCCCCCCCCHHHHHHHhc
Q 045092          246 SSSVTPTNRPLMSFVVSMLE  265 (307)
Q Consensus       246 ~~~~dP~~RPs~~~vl~~L~  265 (307)
                      + +.+|++||++.++.+.|.
T Consensus       232 l-~~~p~~R~~~~~~~~~l~  250 (260)
T cd05611         232 L-CMDPAKRLGANGYQEIKS  250 (260)
T ss_pred             c-cCCHHHccCCCcHHHHHc
Confidence            9 999999998765555444

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.79  E-value=2.5e-19  Score=163.58  Aligned_cols=166  Identities=11%  Similarity=0.104  Sum_probs=115.8

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      ++|...+.||+|+||.||++... +++.||+|.+...   .......+.+|+.++..++|+||+++++++.+...     
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            57888999999999999999954 6889999998642   12234468889999999999999999987764411     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~  160 (331)
T cd05624          81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQS  160 (331)
T ss_pred             eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceee
Confidence                                                                                            


Q ss_pred             ----CCccccchhhhcc-----CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC
Q 045092          159 ----QPIVYMAPEYAKH-----GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK  229 (307)
Q Consensus       159 ----~t~~y~aPE~~~~-----~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  229 (307)
                          +|+.|+|||++.+     +.++.++|||||||++|||++|+.||.....      .+.........   .....+.
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~------~~~~~~i~~~~---~~~~~p~  231 (331)
T cd05624         161 SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL------VETYGKIMNHE---ERFQFPS  231 (331)
T ss_pred             ccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH------HHHHHHHHcCC---CcccCCC
Confidence                0678999999875     5688999999999999999999999963321      11111111110   0011111


Q ss_pred             CchhhHHHHHHHhccccCCCCCCC--CCCHHHHHHH
Q 045092          230 FGFKFYRRTSDGNDQCSSSVTPTN--RPLMSFVVSM  263 (307)
Q Consensus       230 l~~~~~~~~~~l~~~C~~~~dP~~--RPs~~~vl~~  263 (307)
                      .....+.++.+++.+|+ ..++.+  |+++.++++.
T Consensus       232 ~~~~~~~~~~~li~~ll-~~~~~~~~~~~~~~~~~h  266 (331)
T cd05624         232 HITDVSEEAKDLIQRLI-CSRERRLGQNGIEDFKKH  266 (331)
T ss_pred             ccccCCHHHHHHHHHHc-cCchhhcCCCCHHHHhcC
Confidence            11234557788888877 654443  4678887654

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.79  E-value=5.4e-19  Score=162.16  Aligned_cols=173  Identities=16%  Similarity=0.218  Sum_probs=120.1

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC----
Q 045092           86 ATNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK----  158 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~----  158 (307)
                      ..++|...+.||+|+||.||+|... ++..||||.+...  .......+.+|+.++++++|+||+++++++.....    
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF   92 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence            3678999999999999999999954 6889999998643  22334567889999999999999998775532211    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        93 ~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~  172 (343)
T cd07851          93 QDVYLVTHLMGADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDEM  172 (343)
T ss_pred             ccEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccccccccccc
Confidence                                                                                            


Q ss_pred             ----CCccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHH-----------Hhh---
Q 045092          159 ----QPIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYL-----------KRA---  219 (307)
Q Consensus       159 ----~t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~-----------~~~---  219 (307)
                          .+..|+|||.+.+. .++.++|||||||+++||++|+.||.......   ....+....           ...   
T Consensus       173 ~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~  249 (343)
T cd07851         173 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID---QLKRIMNLVGTPDEELLQKISSESAR  249 (343)
T ss_pred             cCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHhcCCCCHHHHhhccchhHH
Confidence                05569999988653 67899999999999999999999995332111   000000000           000   


Q ss_pred             h---hhcccccCCC---chhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          220 R---KLNGASCSKF---GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       220 ~---~~~~~~~~~l---~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .   .+.....+.+   ....+..+.+++..|+ +.+|.+||++.+|+.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l-~~~P~~Rpt~~ell~  297 (343)
T cd07851         250 NYIQSLPQMPKKDFKEVFSGANPLAIDLLEKML-VLDPDKRITAAEALA  297 (343)
T ss_pred             HHHHhccccCCCCHHHHhccCCHHHHHHHHHhC-CCChhhCCCHHHHhc
Confidence            0   0000000111   0123458899999999 999999999999875

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.79  E-value=6.6e-19  Score=156.47  Aligned_cols=172  Identities=19%  Similarity=0.290  Sum_probs=115.5

Q ss_pred             cccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh-hcHHHHHHHHHHHhhCC-CCCccceeeeeecCCCC-------
Q 045092           90 FASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK-QGNREIVNEIGMISALQ-HPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~-------  159 (307)
                      |...+.||+|+||.||+|... +++.||||++..... .......+|+..+.+++ |+||+++++++.+....       
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            566789999999999999964 578999999865422 22334567999999998 99999999887553110       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~  160 (283)
T cd07830          81 EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYVS  160 (283)
T ss_pred             CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCCCC
Confidence                                                                                            


Q ss_pred             Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCccc-HH---------HHHHHHHHhhh---hhccc
Q 045092          160 PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFY-LL---------DWLGSYLKRAR---KLNGA  225 (307)
Q Consensus       160 t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~-l~---------~~~~~~~~~~~---~~~~~  225 (307)
                      +..|+|||.+.. ..++.++||||||++++||++|+.||......+... ..         .|.........   .+...
T Consensus       161 ~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (283)
T cd07830         161 TRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQF  240 (283)
T ss_pred             cccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccccc
Confidence            556999998754 457899999999999999999999985432211000 00         00000000000   00000


Q ss_pred             ccCCCc---hhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          226 SCSKFG---FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       226 ~~~~l~---~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ....+.   ...+..+.+++..|+ +.+|++||++.|++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~li~~cl-~~~p~~Rpt~~ei~~  279 (283)
T cd07830         241 APTSLHQLIPNASPEAIDLIKDML-RWDPKKRPTASQALQ  279 (283)
T ss_pred             ccccHHHHcccCCHHHHHHHHHhc-ccCcccCCCHHHHhh
Confidence            000010   111347899999999 999999999999875

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.79  E-value=1.1e-18  Score=155.53  Aligned_cols=157  Identities=22%  Similarity=0.184  Sum_probs=110.9

Q ss_pred             cccCCCCeeEEEEEE-cCCCEEEEEEccCCCh---hcHHHHHHHHHHHh---hCCCCCccceeeeeecCCC---------
Q 045092           95 EISERGFGPVYRGLL-ADGKVIEVKQLSSKSK---QGNREIVNEIGMIS---ALQHPNLVKLYRLCTETLK---------  158 (307)
Q Consensus        95 ~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~---~l~h~niv~l~g~~~~~~~---------  158 (307)
                      .||+|+||.||++.. .+++.+|+|.+.....   .....+.+|..++.   ..+|+||+++++++.....         
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            489999999999995 4689999998864321   12233455544433   3479999998887654310         


Q ss_pred             ----------------------------------------------------------------------------CCcc
Q 045092          159 ----------------------------------------------------------------------------QPIV  162 (307)
Q Consensus       159 ----------------------------------------------------------------------------~t~~  162 (307)
                                                                                                  ++..
T Consensus        81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  160 (279)
T cd05633          81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG  160 (279)
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCCcC
Confidence                                                                                        0678


Q ss_pred             ccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHH
Q 045092          163 YMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDG  241 (307)
Q Consensus       163 y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l  241 (307)
                      |+|||.+.+ ..++.++|||||||+++||++|+.||..........+    ..       ........++..++.++.++
T Consensus       161 y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~----~~-------~~~~~~~~~~~~~~~~~~~l  229 (279)
T cd05633         161 YMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI----DR-------MTLTVNVELPDSFSPELKSL  229 (279)
T ss_pred             ccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHH----HH-------HhhcCCcCCccccCHHHHHH
Confidence            999998875 4578999999999999999999999964332221111    11       11122334455567789999


Q ss_pred             hccccCCCCCCCCC-----CHHHHHHH
Q 045092          242 NDQCSSSVTPTNRP-----LMSFVVSM  263 (307)
Q Consensus       242 ~~~C~~~~dP~~RP-----s~~~vl~~  263 (307)
                      +..|+ ..||.+||     ++.++++.
T Consensus       230 i~~~l-~~~p~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         230 LEGLL-QRDVSKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             HHHHh-cCCHHHhcCCCCCCHHHHHhC
Confidence            99999 99999999     58888765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.79  E-value=1.2e-18  Score=159.03  Aligned_cols=173  Identities=16%  Similarity=0.152  Sum_probs=115.4

Q ss_pred             CcccCCcccCCCCeeEEEEEEc-C--CCEEEEEEccCC--ChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC----
Q 045092           89 NFASENEISERGFGPVYRGLLA-D--GKVIEVKQLSSK--SKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK----  158 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~-~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~----  158 (307)
                      +|...+.||+|+||.||++... +  +..||||.+...  .....+.+.+|+.++.++ +|+||+++++++.....    
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            4777889999999999999954 4  788999998643  222345788999999999 59999999875322100    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        81 ~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~  160 (332)
T cd07857          81 LYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPG  160 (332)
T ss_pred             EEEEEecccCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccc
Confidence                                                                                            


Q ss_pred             ----------CCccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcc-------------cHHHHHHH
Q 045092          159 ----------QPIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKF-------------YLLDWLGS  214 (307)
Q Consensus       159 ----------~t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~-------------~l~~~~~~  214 (307)
                                +|..|+|||++.+ ..++.++|||||||++++|++|+.||.........             .+..+...
T Consensus       161 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (332)
T cd07857         161 ENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSP  240 (332)
T ss_pred             cccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhh
Confidence                      0456999998765 46889999999999999999999998643211000             00000000


Q ss_pred             HHHhh-hhhcccccCC---CchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          215 YLKRA-RKLNGASCSK---FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       215 ~~~~~-~~~~~~~~~~---l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ..... ..........   +....+..+.+++.+|+ +.||.+||++.+++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l-~~~P~~R~t~~~ll~  291 (332)
T cd07857         241 KAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLL-AFDPTKRISVEEALE  291 (332)
T ss_pred             hHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHc-cCCcccCCCHHHHhc
Confidence            00000 0000000001   11123457889999999 999999999999864

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.79  E-value=5.5e-19  Score=156.38  Aligned_cols=160  Identities=16%  Similarity=0.232  Sum_probs=121.8

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCC-CCCccceeeeeecCCCC---
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK---SKQGNREIVNEIGMISALQ-HPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~---  159 (307)
                      ++|...+.||+|+||.||++... ++..||+|.+...   .....+.+.+|+.++.+++ |+||+++++++......   
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            47888899999999999999954 7899999998643   2233467889999999998 99999998876543100   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~  160 (280)
T cd05581          81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPES  160 (280)
T ss_pred             EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccccc
Confidence                                                                                            


Q ss_pred             ------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHH
Q 045092          160 ------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSY  215 (307)
Q Consensus       160 ------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~  215 (307)
                                              +..|++||....+.++.++||||||++++++++|+.|+.....  . ..   ....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~-~~---~~~~  234 (280)
T cd05581         161 NKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE--Y-LT---FQKI  234 (280)
T ss_pred             CCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH--H-HH---HHHH
Confidence                                    2569999999888899999999999999999999999963321  0 00   1111


Q ss_pred             HHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCH----HHHHH
Q 045092          216 LKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLM----SFVVS  262 (307)
Q Consensus       216 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~----~~vl~  262 (307)
                      .        .....++...+..+.+++..|+ +.+|.+||++    .++++
T Consensus       235 ~--------~~~~~~~~~~~~~~~~li~~~l-~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         235 L--------KLEYSFPPNFPPDAKDLIEKLL-VLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             H--------hcCCCCCCccCHHHHHHHHHHh-cCCHhhCCCcccCHHHHhc
Confidence            1        1122233445668999999999 9999999999    77754

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.78  E-value=1e-18  Score=155.94  Aligned_cols=167  Identities=20%  Similarity=0.214  Sum_probs=120.7

Q ss_pred             CcccCCcccCCCCeeEEEEEE----cCCCEEEEEEccCCC----hhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC-
Q 045092           89 NFASENEISERGFGPVYRGLL----ADGKVIEVKQLSSKS----KQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK-  158 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~----~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~-  158 (307)
                      +|...+.||+|+||.||++..    .++..||||.++...    ....+.+.+|++++.++ +|+||+++++.+..... 
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            477788999999999999883    256889999986432    22345688999999999 69999999875543200 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  160 (288)
T cd05583          81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEE  160 (288)
T ss_pred             EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccccc
Confidence                                                                                            


Q ss_pred             -------CCccccchhhhccCC--CCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC
Q 045092          159 -------QPIVYMAPEYAKHGY--LTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK  229 (307)
Q Consensus       159 -------~t~~y~aPE~~~~~~--~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  229 (307)
                             .+..|+|||.+.++.  .+.++||||||++++||++|..|+.......  ........ .      . ...+.
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~~~~~~-~------~-~~~~~  230 (288)
T cd05583         161 ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN--SQSEISRR-I------L-KSKPP  230 (288)
T ss_pred             cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc--hHHHHHHH-H------H-ccCCC
Confidence                   045699999987655  7889999999999999999999985322111  11111111 1      1 11123


Q ss_pred             CchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          230 FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       230 l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      .+..++..+.+++.+|+ +.||++|||+.++...|+.
T Consensus       231 ~~~~~~~~l~~li~~~l-~~~p~~R~t~~~~~~~l~~  266 (288)
T cd05583         231 FPKTMSAEARDFIQKLL-EKDPKKRLGANGADEIKNH  266 (288)
T ss_pred             CCcccCHHHHHHHHHHh-cCCHhhccCcchHHHHhcC
Confidence            34445668899999999 9999999999888777766

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.78  E-value=5.5e-19  Score=150.89  Aligned_cols=160  Identities=18%  Similarity=0.255  Sum_probs=123.1

Q ss_pred             ccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCC-CCCccceeeeeecCCCC--------
Q 045092           91 ASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQ-HPNLVKLYRLCTETLKQ--------  159 (307)
Q Consensus        91 ~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~--------  159 (307)
                      +....||.|..|.|+++++. +|...|||.+...+ .+..+..+..+.++...+ .|.||+.+|||..+..-        
T Consensus        95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs  174 (391)
T KOG0983|consen   95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS  174 (391)
T ss_pred             hhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH
Confidence            34577999999999999954 78999999997653 445678888999888774 89999999999875110        


Q ss_pred             -------------------------------------------------------------------------------C
Q 045092          160 -------------------------------------------------------------------------------P  160 (307)
Q Consensus       160 -------------------------------------------------------------------------------t  160 (307)
                                                                                                     -
T Consensus       175 ~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAGC  254 (391)
T KOG0983|consen  175 TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAGC  254 (391)
T ss_pred             HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccccccccCC
Confidence                                                                                           6


Q ss_pred             ccccchhhhcc---CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCch--hhH
Q 045092          161 IVYMAPEYAKH---GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGF--KFY  235 (307)
Q Consensus       161 ~~y~aPE~~~~---~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~--~~~  235 (307)
                      +.|||||-+.-   ..|+-++|||||||.|+||+||+.||.....+-     +.+..       +.+-..|.|+.  .++
T Consensus       255 ~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdF-----e~ltk-------vln~ePP~L~~~~gFS  322 (391)
T KOG0983|consen  255 AAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDF-----EVLTK-------VLNEEPPLLPGHMGFS  322 (391)
T ss_pred             ccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccH-----HHHHH-------HHhcCCCCCCcccCcC
Confidence            67999998863   468899999999999999999999996543221     11111       22222345533  267


Q ss_pred             HHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          236 RRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       236 ~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ..+.+++..|+ ..|+.+||...++++.
T Consensus       323 p~F~~fv~~CL-~kd~r~RP~Y~~Ll~h  349 (391)
T KOG0983|consen  323 PDFQSFVKDCL-TKDHRKRPKYNKLLEH  349 (391)
T ss_pred             HHHHHHHHHHh-hcCcccCcchHHHhcC
Confidence            79999999999 9999999999988753

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.78  E-value=6.7e-19  Score=154.31  Aligned_cols=158  Identities=17%  Similarity=0.182  Sum_probs=115.2

Q ss_pred             ccCCCCeeEEEEEEc-CCCEEEEEEccCCCh---hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------------
Q 045092           96 ISERGFGPVYRGLLA-DGKVIEVKQLSSKSK---QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------------  159 (307)
Q Consensus        96 lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------------  159 (307)
                      ||.|+||.||++... +++.+|+|.+.....   ...+.+.+|++++.+++|+||+++++.+......            
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            689999999999965 589999999865433   3456789999999999999999988765433100            


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  160 (265)
T cd05579          81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKR  160 (265)
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccC
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 ---PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 ---t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                         +..|++||.......+.++||||||++++|+++|+.||......      ..... +..+.     .........+.
T Consensus       161 ~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~------~~~~~-~~~~~-----~~~~~~~~~~~  228 (265)
T cd05579         161 IVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE------EIFQN-ILNGK-----IEWPEDVEVSD  228 (265)
T ss_pred             cccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH------HHHHH-HhcCC-----cCCCccccCCH
Confidence               23599999998888999999999999999999999999633211      11111 11111     11111111356


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      .+.+++..|+ +.+|.+||++..+.+.|+.
T Consensus       229 ~~~~~i~~~l-~~~p~~Rpt~~~~~~~l~~  257 (265)
T cd05579         229 EAIDLISKLL-VPDPEKRLGAKSIEEIKNH  257 (265)
T ss_pred             HHHHHHHHHh-cCCHhhcCCCccHHHHhcC
Confidence            8899999999 9999999999665555543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=2.1e-19  Score=163.91  Aligned_cols=152  Identities=18%  Similarity=0.195  Sum_probs=107.4

Q ss_pred             ccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhC---CCCCccceeeeeecCCC----------
Q 045092           96 ISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIGMISAL---QHPNLVKLYRLCTETLK----------  158 (307)
Q Consensus        96 lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l---~h~niv~l~g~~~~~~~----------  158 (307)
                      ||+|+||.||+|.. .+++.||||++....   ......+..|..++.+.   +|+||+++++++.....          
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            79999999999995 478999999986431   12233456677777665   69999999887654311          


Q ss_pred             -----------------------------------------------------------------------------CCc
Q 045092          159 -----------------------------------------------------------------------------QPI  161 (307)
Q Consensus       159 -----------------------------------------------------------------------------~t~  161 (307)
                                                                                                   +|+
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~  160 (330)
T cd05586          81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTT  160 (330)
T ss_pred             ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCCc
Confidence                                                                                         067


Q ss_pred             cccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCc-hhhHHHHH
Q 045092          162 VYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFG-FKFYRRTS  239 (307)
Q Consensus       162 ~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~  239 (307)
                      .|+|||.+.+. .++.++|||||||++|||++|+.||.....      .. ....+..+.       ..++ ..++..+.
T Consensus       161 ~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~------~~-~~~~i~~~~-------~~~~~~~~~~~~~  226 (330)
T cd05586         161 EYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT------QQ-MYRNIAFGK-------VRFPKNVLSDEGR  226 (330)
T ss_pred             cccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH------HH-HHHHHHcCC-------CCCCCccCCHHHH
Confidence            89999998764 478999999999999999999999964321      11 111111111       1111 23455788


Q ss_pred             HHhccccCCCCCCCCC----CHHHHHH
Q 045092          240 DGNDQCSSSVTPTNRP----LMSFVVS  262 (307)
Q Consensus       240 ~l~~~C~~~~dP~~RP----s~~~vl~  262 (307)
                      +++..|+ +.||.+||    ++.++++
T Consensus       227 ~li~~~L-~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         227 QFVKGLL-NRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             HHHHHHc-CCCHHHCCCCCCCHHHHhc
Confidence            9999999 99999998    4566654

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.77  E-value=4.1e-18  Score=150.79  Aligned_cols=168  Identities=17%  Similarity=0.156  Sum_probs=116.2

Q ss_pred             cHHHHHHHhcCcccCCcc--cCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhC-CCCCccceeeeee
Q 045092           79 HLRQIKAATNNFASENEI--SERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISAL-QHPNLVKLYRLCT  154 (307)
Q Consensus        79 ~~~el~~~t~~f~~~~~l--G~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~  154 (307)
                      +..++....++|+..+.+  |+|+||.||++.. .++..+|+|.+........     |+.....+ +|+||+++++++.
T Consensus         5 ~~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~   79 (267)
T PHA03390          5 SLSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVT   79 (267)
T ss_pred             HHHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEe
Confidence            344555556777777776  9999999999994 4788999999864322111     22222222 7999999998875


Q ss_pred             cCCCC---------------------------------------------------------------------------
Q 045092          155 ETLKQ---------------------------------------------------------------------------  159 (307)
Q Consensus       155 ~~~~~---------------------------------------------------------------------------  159 (307)
                      .....                                                                           
T Consensus        80 ~~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~  159 (267)
T PHA03390         80 TLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKI  159 (267)
T ss_pred             cCCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCcccee
Confidence            54110                                                                           


Q ss_pred             ---------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC
Q 045092          160 ---------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF  230 (307)
Q Consensus       160 ---------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l  230 (307)
                               +..|+|||++.++.++.++||||||++++||++|+.||..... ....+..+...       .  ......
T Consensus       160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~-------~--~~~~~~  229 (267)
T PHA03390        160 IGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDED-EELDLESLLKR-------Q--QKKLPF  229 (267)
T ss_pred             cCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCc-chhhHHHHHHh-------h--cccCCc
Confidence                     6679999999988899999999999999999999999963322 11111111111       1  011122


Q ss_pred             chhhHHHHHHHhccccCCCCCCCCCC-HHHHHH
Q 045092          231 GFKFYRRTSDGNDQCSSSVTPTNRPL-MSFVVS  262 (307)
Q Consensus       231 ~~~~~~~~~~l~~~C~~~~dP~~RPs-~~~vl~  262 (307)
                      ....+..+.+++..|+ +.+|.+||+ ++++++
T Consensus       230 ~~~~~~~~~~li~~~l-~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        230 IKNVSKNANDFVQSML-KYNINYRLTNYNEIIK  261 (267)
T ss_pred             ccccCHHHHHHHHHHh-ccChhhCCchHHHHhc
Confidence            2345668899999999 999999995 688864

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.77  E-value=3.3e-18  Score=152.25  Aligned_cols=156  Identities=22%  Similarity=0.202  Sum_probs=110.0

Q ss_pred             cccCCCCeeEEEEEE-cCCCEEEEEEccCCCh---hcHHHHHHHHH---HHhhCCCCCccceeeeeecCCC---------
Q 045092           95 EISERGFGPVYRGLL-ADGKVIEVKQLSSKSK---QGNREIVNEIG---MISALQHPNLVKLYRLCTETLK---------  158 (307)
Q Consensus        95 ~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~---~~~~~~~~E~~---~l~~l~h~niv~l~g~~~~~~~---------  158 (307)
                      .||+|+||.||++.. .+++.||+|.+.....   .....+..|..   .+....|+||+++++++.....         
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            489999999999984 4688999998864321   11223444443   4445689999998876654310         


Q ss_pred             ----------------------------------------------------------------------------CCcc
Q 045092          159 ----------------------------------------------------------------------------QPIV  162 (307)
Q Consensus       159 ----------------------------------------------------------------------------~t~~  162 (307)
                                                                                                  ++..
T Consensus        81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  160 (278)
T cd05606          81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG  160 (278)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCCcC
Confidence                                                                                        0678


Q ss_pred             ccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHH
Q 045092          163 YMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDG  241 (307)
Q Consensus       163 y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l  241 (307)
                      |+|||++.++ .++.++|||||||+++||++|+.||...........    ..       ......+.++...+..+.++
T Consensus       161 y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~----~~-------~~~~~~~~~~~~~s~~~~~l  229 (278)
T cd05606         161 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI----DR-------MTLTMAVELPDSFSPELRSL  229 (278)
T ss_pred             CcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH----HH-------HhhccCCCCCCcCCHHHHHH
Confidence            9999998765 588999999999999999999999964322121111    00       11112233444456789999


Q ss_pred             hccccCCCCCCCCC-----CHHHHHH
Q 045092          242 NDQCSSSVTPTNRP-----LMSFVVS  262 (307)
Q Consensus       242 ~~~C~~~~dP~~RP-----s~~~vl~  262 (307)
                      +.+|+ ..+|.+||     ++.++++
T Consensus       230 i~~~l-~~~p~~R~~~~~~~~~~ll~  254 (278)
T cd05606         230 LEGLL-QRDVNRRLGCLGRGAQEVKE  254 (278)
T ss_pred             HHHHh-hcCHHhccCCCCCCHHHHHh
Confidence            99999 99999999     8888875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.76  E-value=3.4e-18  Score=152.71  Aligned_cols=163  Identities=20%  Similarity=0.215  Sum_probs=117.3

Q ss_pred             CcccCCcccCCCCeeEEEEEE----cCCCEEEEEEccCCCh----hcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC-
Q 045092           89 NFASENEISERGFGPVYRGLL----ADGKVIEVKQLSSKSK----QGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK-  158 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~----~~~~~vAvK~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~-  158 (307)
                      +|+..+.||+|+||.||++..    .+|..||+|.+.....    ...+.+.+|++++.++ +|+||+++++++..... 
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            477789999999999999984    3688999999864322    2345688999999999 69999999877644310 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~  160 (290)
T cd05613          81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV  160 (290)
T ss_pred             EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccc
Confidence                                                                                            


Q ss_pred             -------CCccccchhhhccC--CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC
Q 045092          159 -------QPIVYMAPEYAKHG--YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK  229 (307)
Q Consensus       159 -------~t~~y~aPE~~~~~--~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  229 (307)
                             ++..|+|||++..+  .++.++||||||+++++|++|+.|+.....  .............        ..+.
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~--~~~~~~~~~~~~~--------~~~~  230 (290)
T cd05613         161 ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE--KNSQAEISRRILK--------SEPP  230 (290)
T ss_pred             cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc--cccHHHHHHHhhc--------cCCC
Confidence                   05679999998753  467899999999999999999999853221  1111221111111        1122


Q ss_pred             CchhhHHHHHHHhccccCCCCCCCCC-----CHHHHHH
Q 045092          230 FGFKFYRRTSDGNDQCSSSVTPTNRP-----LMSFVVS  262 (307)
Q Consensus       230 l~~~~~~~~~~l~~~C~~~~dP~~RP-----s~~~vl~  262 (307)
                      .+..++..+.+++..|+ +.+|.+||     ++.+++.
T Consensus       231 ~~~~~~~~~~~ll~~~l-~~~p~~R~~~~~~~~~~l~~  267 (290)
T cd05613         231 YPQEMSALAKDIIQRLL-MKDPKKRLGCGPSDADEIKK  267 (290)
T ss_pred             CCccCCHHHHHHHHHHh-cCCHHHhcCCCCCCHHHHHc
Confidence            33445668899999999 99999997     5566544

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.76  E-value=2.9e-18  Score=149.36  Aligned_cols=148  Identities=20%  Similarity=0.200  Sum_probs=112.8

Q ss_pred             ccCCCCeeEEEEEEc-CCCEEEEEEccCCCh---hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------------
Q 045092           96 ISERGFGPVYRGLLA-DGKVIEVKQLSSKSK---QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------------  159 (307)
Q Consensus        96 lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------------  159 (307)
                      ||+|+||.||++... +++.+|+|.+.....   .....+..|+.++++++|+||+++++.+..+...            
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            699999999999954 688999999865422   2455789999999999999999998776543100            


Q ss_pred             ---------------------------------------------------------------------------Ccccc
Q 045092          160 ---------------------------------------------------------------------------PIVYM  164 (307)
Q Consensus       160 ---------------------------------------------------------------------------t~~y~  164 (307)
                                                                                                 +..|+
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~  160 (250)
T cd05123          81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYL  160 (250)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCcccc
Confidence                                                                                       55799


Q ss_pred             chhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhcc
Q 045092          165 APEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQ  244 (307)
Q Consensus       165 aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~  244 (307)
                      +||...+...+.++|+||||++++++++|+.||.....   ..+.   ..       +.. ....++...+..+.+++.+
T Consensus       161 ~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---~~~~---~~-------~~~-~~~~~~~~~~~~l~~~i~~  226 (250)
T cd05123         161 APEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR---KEIY---EK-------ILK-DPLRFPEFLSPEARDLISG  226 (250)
T ss_pred             ChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---HHHH---HH-------Hhc-CCCCCCCCCCHHHHHHHHH
Confidence            99999888889999999999999999999999954322   1111   11       111 1223344456688999999


Q ss_pred             ccCCCCCCCCCCHH
Q 045092          245 CSSSVTPTNRPLMS  258 (307)
Q Consensus       245 C~~~~dP~~RPs~~  258 (307)
                      |+ ..||++||++.
T Consensus       227 ~l-~~~p~~R~~~~  239 (250)
T cd05123         227 LL-QKDPTKRLGSG  239 (250)
T ss_pred             Hh-cCCHhhCCCcc
Confidence            99 99999999993

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.74  E-value=3.8e-18  Score=154.19  Aligned_cols=174  Identities=20%  Similarity=0.264  Sum_probs=117.8

Q ss_pred             cCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhh--CCCCCccceeeeeecCCCC------
Q 045092           88 NNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISA--LQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~g~~~~~~~~------  159 (307)
                      ....+.+.||+|.||.|++|.++ |..||||++...+   .+.+.+|.++...  ++|+||+.+++.-..+...      
T Consensus       211 rqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwL  286 (513)
T KOG2052|consen  211 RQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWL  286 (513)
T ss_pred             heeEEEEEecCccccceeecccc-CCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEE
Confidence            45677889999999999999996 8899999996543   3577888888775  4999999988653322100      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       287 vTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h  366 (513)
T KOG2052|consen  287 VTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH  366 (513)
T ss_pred             eeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEe
Confidence                                                                                            


Q ss_pred             ----------------CccccchhhhccCC----C--CchhHHHHHHHHHHHHHhC----------CCCCcCCCccCccc
Q 045092          160 ----------------PIVYMAPEYAKHGY----L--TDKAEVCSFGIVTLEIESG----------RSNVICRTKEDKFY  207 (307)
Q Consensus       160 ----------------t~~y~aPE~~~~~~----~--~~~sDV~s~Gvvl~elltg----------~~p~~~~~~~~~~~  207 (307)
                                      |-.|||||++...-    +  ...+||||||.|+||++..          +.||...-+.+. +
T Consensus       367 ~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DP-s  445 (513)
T KOG2052|consen  367 DSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDP-S  445 (513)
T ss_pred             cccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCC-C
Confidence                            88999999987531    2  2459999999999999863          567754333322 1


Q ss_pred             HHHHHHHHHHhhhhhcccccCCCc-hhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          208 LLDWLGSYLKRARKLNGASCSKFG-FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       208 l~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                      +.+ +...+-..+ +...++.+.. ...-..+.+++..|| ..||..|-|+--+-+.|..+..
T Consensus       446 ~ee-MrkVVCv~~-~RP~ipnrW~s~~~l~~m~klMkeCW-~~Np~aRltALriKKtl~~l~~  505 (513)
T KOG2052|consen  446 FEE-MRKVVCVQK-LRPNIPNRWKSDPALRVMAKLMKECW-YANPAARLTALRIKKTLAKLSN  505 (513)
T ss_pred             HHH-Hhcceeecc-cCCCCCcccccCHHHHHHHHHHHHhh-cCCchhhhHHHHHHHHHHHHhc
Confidence            111 111111111 2222222221 122337889999999 9999999999888887776553

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.73  E-value=1.7e-17  Score=146.71  Aligned_cols=172  Identities=16%  Similarity=0.210  Sum_probs=121.4

Q ss_pred             cCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCCCh--hcHHHHHHHHHHHhhCCCCC-ccceeeeeecCCCC----
Q 045092           88 NNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSK--QGNREIVNEIGMISALQHPN-LVKLYRLCTETLKQ----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~n-iv~l~g~~~~~~~~----  159 (307)
                      ..|...++||+|+||.||+|+ ..+|+.||+|++.....  .......+|+.+|++++|+| ||+|++++......    
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~   90 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG   90 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence            445556789999999999999 55889999999875533  23456789999999999999 99999998775310    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        91 ~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~  170 (323)
T KOG0594|consen   91 KLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAF  170 (323)
T ss_pred             eEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHh
Confidence                                                                                            


Q ss_pred             ------------CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhh--h---h
Q 045092          160 ------------PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRA--R---K  221 (307)
Q Consensus       160 ------------t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~--~---~  221 (307)
                                  |..|.|||.+.+. .|+...||||+||++.||++++.-|.+...   ......+...+...  .   .
T Consensus       171 ~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se---~~ql~~If~~lGtP~e~~Wp~  247 (323)
T KOG0594|consen  171 SIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE---IDQLFRIFRLLGTPNEKDWPG  247 (323)
T ss_pred             cCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH---HHHHHHHHHHcCCCCccCCCC
Confidence                        8889999998876 799999999999999999998887754332   11111111111100  0   0


Q ss_pred             hcccc--cCCC-----chhh----H---HHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          222 LNGAS--CSKF-----GFKF----Y---RRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       222 ~~~~~--~~~l-----~~~~----~---~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      +....  ++..     +...    +   ....+++..|+ +.+|.+|.++...+.+
T Consensus       248 v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L-~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  248 VSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLL-QYDPAKRISAKGALTH  302 (323)
T ss_pred             ccccccccccCcCCCCccchHHhccccCccHHHHHHHHh-ccCcccCcCHHHHhcC
Confidence            00000  0000     0111    1   26788899999 9999999999988765

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.73  E-value=2.5e-17  Score=141.83  Aligned_cols=151  Identities=22%  Similarity=0.291  Sum_probs=113.7

Q ss_pred             CCeeEEEEEEc-CCCEEEEEEccCCChhc-HHHHHHHHHHHhhCCCCCccceeeeeecCCCC------------------
Q 045092          100 GFGPVYRGLLA-DGKVIEVKQLSSKSKQG-NREIVNEIGMISALQHPNLVKLYRLCTETLKQ------------------  159 (307)
Q Consensus       100 ~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------------------  159 (307)
                      +||.||+|... +++.+|+|.+....... .+.+.+|++.+++++|+||+++++++......                  
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            68999999965 58999999987654444 67899999999999999999999887653100                  


Q ss_pred             --------------------------------------------------------------------Cccccchhhhcc
Q 045092          160 --------------------------------------------------------------------PIVYMAPEYAKH  171 (307)
Q Consensus       160 --------------------------------------------------------------------t~~y~aPE~~~~  171 (307)
                                                                                          +..|++||.+..
T Consensus        81 ~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~  160 (244)
T smart00220       81 RGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLG  160 (244)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHHHcc
Confidence                                                                                557999999998


Q ss_pred             CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCch-hhHHHHHHHhccccCCCC
Q 045092          172 GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGF-KFYRRTSDGNDQCSSSVT  250 (307)
Q Consensus       172 ~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~l~~~C~~~~d  250 (307)
                      +.++.++|||+||+++++|++|..|+....  ....+    ........     ....... .++.++.+++.+|+ ..+
T Consensus       161 ~~~~~~~Di~slG~~l~~l~~~~~p~~~~~--~~~~~----~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~l-~~~  228 (244)
T smart00220      161 KGYGKAVDVWSLGVILYELLTGKPPFPGDD--QLLEL----FKKIGKPK-----PPFPPPEWKISPEAKDLIRKLL-VKD  228 (244)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCC--cHHHH----HHHHhccC-----CCCccccccCCHHHHHHHHHHc-cCC
Confidence            889999999999999999999999985421  11111    11111111     1111111 15568999999999 999


Q ss_pred             CCCCCCHHHHHH
Q 045092          251 PTNRPLMSFVVS  262 (307)
Q Consensus       251 P~~RPs~~~vl~  262 (307)
                      |++||++.++++
T Consensus       229 p~~Rp~~~~~~~  240 (244)
T smart00220      229 PEKRLTAEEALQ  240 (244)
T ss_pred             chhccCHHHHhh
Confidence            999999999976

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.72  E-value=1e-17  Score=156.73  Aligned_cols=163  Identities=16%  Similarity=0.239  Sum_probs=122.2

Q ss_pred             HHhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCCh--hcHHHHHHHHHHHhhCCCCCccceeeeeecCCC---
Q 045092           85 AATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSK--QGNREIVNEIGMISALQHPNLVKLYRLCTETLK---  158 (307)
Q Consensus        85 ~~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~---  158 (307)
                      .-..+|.+...||+|.|+.|.+++. .++..||||.+.+...  .....+.+|+++|..++|||||+++.+......   
T Consensus        53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl  132 (596)
T KOG0586|consen   53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL  132 (596)
T ss_pred             ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence            3467899999999999999999994 4799999999875422  233458999999999999999999988764310   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       133 V~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lq  212 (596)
T KOG0586|consen  133 VMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQ  212 (596)
T ss_pred             EEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeeccccccc
Confidence                                                                                            


Q ss_pred             ---CCccccchhhhccCCC-CchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          159 ---QPIVYMAPEYAKHGYL-TDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       159 ---~t~~y~aPE~~~~~~~-~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                         +++.|.|||+..+..| ..++|+||+|++||.|+.|..||++.....-       ......+       .-+++...
T Consensus       213 t~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~L-------r~rvl~g-------k~rIp~~m  278 (596)
T KOG0586|consen  213 TFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKEL-------RPRVLRG-------KYRIPFYM  278 (596)
T ss_pred             ccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccc-------cchheee-------eeccccee
Confidence               0888999999987765 4789999999999999999999975443221       1111111       01112222


Q ss_pred             HHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ..++.+++...+ -.+|.+|++++++..
T Consensus       279 s~dce~lLrk~l-vl~Pskr~~~dqim~  305 (596)
T KOG0586|consen  279 SCDCEDLLRKFL-VLNPSKRGPCDQIMK  305 (596)
T ss_pred             echhHHHHHHhh-ccCccccCCHHHhhh
Confidence            336677777777 899999999999865

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.72  E-value=3.6e-18  Score=161.94  Aligned_cols=113  Identities=26%  Similarity=0.470  Sum_probs=94.1

Q ss_pred             cccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCC----C-----
Q 045092           90 FASENEISERGFGPVYRGL-LADGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETL----K-----  158 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~----~-----  158 (307)
                      +...+.||+||||.||+|+ ..+|+.||||.++... ....+...+|+++|++++|+|||++++.-.+..    .     
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl   94 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL   94 (732)
T ss_pred             eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence            4556889999999999999 5589999999997643 344567889999999999999999987543321    0     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel  174 (732)
T KOG4250|consen   95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAREL  174 (732)
T ss_pred             EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccC
Confidence                                                                                            


Q ss_pred             ----------CCccccchhhhc-cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCc
Q 045092          159 ----------QPIVYMAPEYAK-HGYLTDKAEVCSFGIVTLEIESGRSNVICRTK  202 (307)
Q Consensus       159 ----------~t~~y~aPE~~~-~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~  202 (307)
                                +|..|++||... ++.|+..+|.|||||++||.+||..||.....
T Consensus       175 ~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~  229 (732)
T KOG4250|consen  175 DDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGG  229 (732)
T ss_pred             CCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCC
Confidence                      088999999998 58999999999999999999999999975443

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.72  E-value=1.1e-17  Score=150.18  Aligned_cols=162  Identities=17%  Similarity=0.186  Sum_probs=120.6

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      ++|+..+.||.|.-|+||+++.. ++..+|+|++.+..   .........|-+||+.++||.++.||+.+..+...    
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m  156 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM  156 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence            44566789999999999999965 56899999997543   23345678899999999999999999776554100    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~  236 (459)
T KOG0610|consen  157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLV  236 (459)
T ss_pred             ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeee
Confidence                                                                                            


Q ss_pred             -------------------------------------------------------------CccccchhhhccCCCCchh
Q 045092          160 -------------------------------------------------------------PIVYMAPEYAKHGYLTDKA  178 (307)
Q Consensus       160 -------------------------------------------------------------t~~y~aPE~~~~~~~~~~s  178 (307)
                                                                                   |--|+|||++.+...+..+
T Consensus       237 ~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAV  316 (459)
T KOG0610|consen  237 KSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAV  316 (459)
T ss_pred             ccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchh
Confidence                                                                         7779999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCC--
Q 045092          179 EVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPL--  256 (307)
Q Consensus       179 DV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs--  256 (307)
                      |.|+|||++|||+.|..||.+....+.  +.    ..+.     .+..-|..+ .......+++..-+ ..||.+|--  
T Consensus       317 DWWtfGIflYEmLyG~TPFKG~~~~~T--l~----NIv~-----~~l~Fp~~~-~vs~~akDLIr~LL-vKdP~kRlg~~  383 (459)
T KOG0610|consen  317 DWWTFGIFLYEMLYGTTPFKGSNNKET--LR----NIVG-----QPLKFPEEP-EVSSAAKDLIRKLL-VKDPSKRLGSK  383 (459)
T ss_pred             hHHHHHHHHHHHHhCCCCcCCCCchhh--HH----HHhc-----CCCcCCCCC-cchhHHHHHHHHHh-ccChhhhhccc
Confidence            999999999999999999976543321  11    1111     111111111 33457889999999 999999987  


Q ss_pred             --HHHHHH
Q 045092          257 --MSFVVS  262 (307)
Q Consensus       257 --~~~vl~  262 (307)
                        +.+|-+
T Consensus       384 rGA~eIK~  391 (459)
T KOG0610|consen  384 RGAAEIKR  391 (459)
T ss_pred             cchHHhhc
Confidence              555543

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.72  E-value=3.5e-18  Score=154.71  Aligned_cols=158  Identities=22%  Similarity=0.265  Sum_probs=114.7

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      +.|..-++||+||||.||-+.. .+|+.+|.|++.+.   ..+....-++|-.+|.+++.+.||.+.-.+...+..    
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL  264 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL  264 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence            5688889999999999999995 48999999988643   223445678999999999999999987666544211    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       265 tlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~  344 (591)
T KOG0986|consen  265 TLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIR  344 (591)
T ss_pred             EeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCCccc
Confidence                                                                                            


Q ss_pred             ----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhH
Q 045092          160 ----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFY  235 (307)
Q Consensus       160 ----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  235 (307)
                          |.+|||||++.++.|+...|.||+||++|||+.|+.||........   .+-+.+.....       ...++..++
T Consensus       345 ~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk---~eEvdrr~~~~-------~~ey~~kFS  414 (591)
T KOG0986|consen  345 GRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK---REEVDRRTLED-------PEEYSDKFS  414 (591)
T ss_pred             cccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhh---HHHHHHHHhcc-------hhhcccccC
Confidence                9999999999999999999999999999999999999953221111   11111111111       122334555


Q ss_pred             HHHHHHhccccCCCCCCCCCC
Q 045092          236 RRTSDGNDQCSSSVTPTNRPL  256 (307)
Q Consensus       236 ~~~~~l~~~C~~~~dP~~RPs  256 (307)
                      .+...+...-+ +.||++|--
T Consensus       415 ~eakslc~~LL-~Kdp~~RLG  434 (591)
T KOG0986|consen  415 EEAKSLCEGLL-TKDPEKRLG  434 (591)
T ss_pred             HHHHHHHHHHH-ccCHHHhcc
Confidence            56666666666 788887754

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.71  E-value=6.5e-18  Score=158.76  Aligned_cols=156  Identities=21%  Similarity=0.241  Sum_probs=122.4

Q ss_pred             hcCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCCChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~-----  159 (307)
                      ++.|.....+|.|+|+.|..+. ..+++..+||++....    .+-.+|+.++... +|+||+++.+.+.+....     
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e  396 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME  396 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence            5678888889999999999998 4578899999997652    2344577676666 899999999988776221     


Q ss_pred             -------------------------------------------------------------------------------C
Q 045092          160 -------------------------------------------------------------------------------P  160 (307)
Q Consensus       160 -------------------------------------------------------------------------------t  160 (307)
                                                                                                     |
T Consensus       397 ~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~t  476 (612)
T KOG0603|consen  397 LLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPALT  476 (612)
T ss_pred             hccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchhhcccchh
Confidence                                                                                           7


Q ss_pred             ccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHH
Q 045092          161 IVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSD  240 (307)
Q Consensus       161 ~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  240 (307)
                      ..|.|||++....|+..+|+||||++||+|++|+.||......  ..    +...+         ..+......+....+
T Consensus       477 ~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~--~e----i~~~i---------~~~~~s~~vS~~AKd  541 (612)
T KOG0603|consen  477 LQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG--IE----IHTRI---------QMPKFSECVSDEAKD  541 (612)
T ss_pred             hcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch--HH----HHHhh---------cCCccccccCHHHHH
Confidence            8899999999999999999999999999999999999644332  11    12222         222233456668899


Q ss_pred             HhccccCCCCCCCCCCHHHHHH
Q 045092          241 GNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       241 l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ++..|+ +.||.+||+|.++..
T Consensus       542 Ll~~LL-~~dP~~Rl~~~~i~~  562 (612)
T KOG0603|consen  542 LLQQLL-QVDPALRLGADEIGA  562 (612)
T ss_pred             HHHHhc-cCChhhCcChhhhcc
Confidence            999999 999999999999864

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.71  E-value=2.1e-17  Score=141.31  Aligned_cols=165  Identities=15%  Similarity=0.189  Sum_probs=123.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC----hhc----HHHHHHHHHHHhhC-CCCCccceeeeeecC
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS----KQG----NREIVNEIGMISAL-QHPNLVKLYRLCTET  156 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~----~~~----~~~~~~E~~~l~~l-~h~niv~l~g~~~~~  156 (307)
                      .+.|...+.||+|..+.|-++.. .+|...|+|++....    ...    .+.-.+|+.+|+++ .||||+++.+++..+
T Consensus        16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~   95 (411)
T KOG0599|consen   16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD   95 (411)
T ss_pred             HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence            46788889999999999999884 478899999886321    111    23457899999999 799999999998765


Q ss_pred             C-------------------------------------------------------------------------------
Q 045092          157 L-------------------------------------------------------------------------------  157 (307)
Q Consensus       157 ~-------------------------------------------------------------------------------  157 (307)
                      .                                                                               
T Consensus        96 sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~  175 (411)
T KOG0599|consen   96 AFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEP  175 (411)
T ss_pred             chhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCC
Confidence            1                                                                               


Q ss_pred             -------CCCccccchhhhcc------CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcc
Q 045092          158 -------KQPIVYMAPEYAKH------GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNG  224 (307)
Q Consensus       158 -------~~t~~y~aPE~~~~------~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  224 (307)
                             .+|++|+|||.+..      ..|+..+|+|+.||++|.|+.|.+||.+....       .+...+.+|+  .+
T Consensus       176 GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQm-------lMLR~ImeGk--yq  246 (411)
T KOG0599|consen  176 GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQM-------LMLRMIMEGK--YQ  246 (411)
T ss_pred             chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHH-------HHHHHHHhcc--cc
Confidence                   11999999998753      34888999999999999999999999643210       1233344443  22


Q ss_pred             cccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          225 ASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       225 ~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      +-.|.- ..+.....+++.+|+ +.||.+|.|++|++.
T Consensus       247 F~speW-adis~~~KdLIsrlL-qVdp~~Ritake~La  282 (411)
T KOG0599|consen  247 FRSPEW-ADISATVKDLISRLL-QVDPTKRITAKEALA  282 (411)
T ss_pred             cCCcch-hhccccHHHHHHHHH-eeCchhcccHHHHhc
Confidence            222222 234458899999999 999999999999875

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.71  E-value=1.2e-17  Score=161.38  Aligned_cols=171  Identities=19%  Similarity=0.307  Sum_probs=131.0

Q ss_pred             cccHHHHHHHhcCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCCChhcHHHHHHHHHHHhhC-CCCCccceeeeee
Q 045092           77 SFHLRQIKAATNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISAL-QHPNLVKLYRLCT  154 (307)
Q Consensus        77 ~~~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~  154 (307)
                      ...+..+.+.++-|.+.+.||.|.+|.||+++ .++++.+|+|++.... ...++...|..+|+.+ +|||++.++|++.
T Consensus         8 ~~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~   86 (953)
T KOG0587|consen    8 DIDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFI   86 (953)
T ss_pred             ccchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEE
Confidence            34566666778889999999999999999999 6689999999986543 3345677788899888 7999999999886


Q ss_pred             cCCCC---------------------------------------------------------------------------
Q 045092          155 ETLKQ---------------------------------------------------------------------------  159 (307)
Q Consensus       155 ~~~~~---------------------------------------------------------------------------  159 (307)
                      -....                                                                           
T Consensus        87 k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvD  166 (953)
T KOG0587|consen   87 KKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVD  166 (953)
T ss_pred             EecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEee
Confidence            54221                                                                           


Q ss_pred             -------------------CccccchhhhccC-----CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHH
Q 045092          160 -------------------PIVYMAPEYAKHG-----YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSY  215 (307)
Q Consensus       160 -------------------t~~y~aPE~~~~~-----~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~  215 (307)
                                         |+.|||||++...     .|+..+|+||+|++..||.-|.+|+....+...         +
T Consensus       167 FGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmra---------L  237 (953)
T KOG0587|consen  167 FGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA---------L  237 (953)
T ss_pred             eeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhh---------h
Confidence                               9999999998743     478899999999999999999999854333221         1


Q ss_pred             HHhhhhhcccccCCCc--hhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          216 LKRARKLNGASCSKFG--FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       216 ~~~~~~~~~~~~~~l~--~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      +.    +...-.|.+.  ..-..++.+++..|+ ..|-++||++.++++
T Consensus       238 F~----IpRNPPPkLkrp~kWs~~FndFIs~cL-~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  238 FL----IPRNPPPKLKRPKKWSKKFNDFISTCL-VKDYEQRPSTEELLK  281 (953)
T ss_pred             cc----CCCCCCccccchhhHHHHHHHHHHHHH-hhccccCcchhhhcc
Confidence            10    2333334442  233448999999999 999999999988764

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.71  E-value=6.5e-18  Score=147.48  Aligned_cols=161  Identities=19%  Similarity=0.189  Sum_probs=118.0

Q ss_pred             hcCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETL-----  157 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-----  157 (307)
                      .++|+-.++||+|.||+|-+++ ..+++.+|||++++.-   ......-+.|-.+|...+||.+..|.-.+...+     
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV  246 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV  246 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence            4778889999999999999999 5589999999998653   233445678899999999998887643222210     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          158 --------------------------------------------------------------------------------  157 (307)
Q Consensus       158 --------------------------------------------------------------------------------  157 (307)
                                                                                                      
T Consensus       247 MeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~k  326 (516)
T KOG0690|consen  247 MEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTK  326 (516)
T ss_pred             EEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcccccceec
Confidence                                                                                            


Q ss_pred             --CCCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhH
Q 045092          158 --KQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFY  235 (307)
Q Consensus       158 --~~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  235 (307)
                        .+|+.|+|||++....|...+|.|.+||++|||+.|+.||...+...   |.+    ++       -.-+-+++....
T Consensus       327 TFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~k---LFe----LI-------l~ed~kFPr~ls  392 (516)
T KOG0690|consen  327 TFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEK---LFE----LI-------LMEDLKFPRTLS  392 (516)
T ss_pred             cccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhH---HHH----HH-------HhhhccCCccCC
Confidence              01999999999999999999999999999999999999997544322   222    11       111233444555


Q ss_pred             HHHHHHhccccCCCCCCCCC-----CHHHHHH
Q 045092          236 RRTSDGNDQCSSSVTPTNRP-----LMSFVVS  262 (307)
Q Consensus       236 ~~~~~l~~~C~~~~dP~~RP-----s~~~vl~  262 (307)
                      .+...+...-+ ..||.+|-     .+.+|.+
T Consensus       393 ~eAktLLsGLL-~kdP~kRLGgGpdDakEi~~  423 (516)
T KOG0690|consen  393 PEAKTLLSGLL-KKDPKKRLGGGPDDAKEIMR  423 (516)
T ss_pred             HHHHHHHHHHh-hcChHhhcCCCchhHHHHHh
Confidence            56666666677 89999984     3555543

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.68  E-value=4.9e-17  Score=141.69  Aligned_cols=175  Identities=14%  Similarity=0.209  Sum_probs=125.9

Q ss_pred             cHHHHHHHhcCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCCChhcHHHHHHHHHHHhhC-CCCCccceeeeeecC
Q 045092           79 HLRQIKAATNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISAL-QHPNLVKLYRLCTET  156 (307)
Q Consensus        79 ~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~  156 (307)
                      ++.++-+.|+     +.||+|+|+.|--+. +.+|..+|||++.+..........+|++++.+. .|+||++|++++.++
T Consensus        74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd  148 (463)
T KOG0607|consen   74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD  148 (463)
T ss_pred             hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence            5677766664     689999999999988 778999999999776555667899999999999 699999999999876


Q ss_pred             CCC-----------------------------------------------------------------------------
Q 045092          157 LKQ-----------------------------------------------------------------------------  159 (307)
Q Consensus       157 ~~~-----------------------------------------------------------------------------  159 (307)
                      ...                                                                             
T Consensus       149 ~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg  228 (463)
T KOG0607|consen  149 TRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSG  228 (463)
T ss_pred             ceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccc
Confidence            221                                                                             


Q ss_pred             --------------------Cccccchhhhc-----cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCc-------c-
Q 045092          160 --------------------PIVYMAPEYAK-----HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDK-------F-  206 (307)
Q Consensus       160 --------------------t~~y~aPE~~~-----~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~-------~-  206 (307)
                                          +..|||||++.     .-.|+.+.|.||+|||||-|++|-+||.+.-..+-       . 
T Consensus       229 ~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr  308 (463)
T KOG0607|consen  229 IKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCR  308 (463)
T ss_pred             cccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccH
Confidence                                34599999764     23588899999999999999999999976543321       1 


Q ss_pred             cHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          207 YLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       207 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .-.+.+...+++|.  .++.+..- ..++.+..+++..-+ ..|+..|-++.++++
T Consensus       309 ~CQ~~LFesIQEGk--YeFPdkdW-ahIS~eakdlisnLl-vrda~~rlsa~~vln  360 (463)
T KOG0607|consen  309 VCQNKLFESIQEGK--YEFPDKDW-AHISSEAKDLISNLL-VRDAKQRLSAAQVLN  360 (463)
T ss_pred             HHHHHHHHHHhccC--CcCChhhh-HHhhHHHHHHHHHHH-hccHHhhhhhhhccC
Confidence            11122333344443  22222111 112335666776767 788888888887765

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.67  E-value=4.1e-17  Score=143.06  Aligned_cols=162  Identities=15%  Similarity=0.150  Sum_probs=119.7

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC---ChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCCC-
Q 045092           86 ATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK---SKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLKQ-  159 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~-  159 (307)
                      ..++|.+.++||+|+|++|.++++ .+.+.+|+|++++.   ..++.+....|-.+..+. +||.+|-|+.++...... 
T Consensus       248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf  327 (593)
T KOG0695|consen  248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF  327 (593)
T ss_pred             ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence            357899999999999999999994 57889999998754   345566788888888887 799999988776554111 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       328 fvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~  407 (593)
T KOG0695|consen  328 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDT  407 (593)
T ss_pred             EEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCCcc
Confidence                                                                                            


Q ss_pred             ------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCc-cCcccHHHHHHHHHHhhhhhcccccCCCch
Q 045092          160 ------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTK-EDKFYLLDWLGSYLKRARKLNGASCSKFGF  232 (307)
Q Consensus       160 ------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  232 (307)
                            |+.|+|||.+.+..|...+|.|++||+++||+.|+.||+.... ....+..+++...+-+..       -+++.
T Consensus       408 tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekq-------iripr  480 (593)
T KOG0695|consen  408 TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQ-------IRIPR  480 (593)
T ss_pred             cccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhc-------ccccc
Confidence                  9999999999999999999999999999999999999975321 122334444444443322       12233


Q ss_pred             hhHHHHHHHhccccCCCCCCCCC
Q 045092          233 KFYRRTSDGNDQCSSSVTPTNRP  255 (307)
Q Consensus       233 ~~~~~~~~l~~~C~~~~dP~~RP  255 (307)
                      +.+.+...+...-+ ..||.+|-
T Consensus       481 slsvkas~vlkgfl-nkdp~erl  502 (593)
T KOG0695|consen  481 SLSVKASHVLKGFL-NKDPKERL  502 (593)
T ss_pred             eeehhhHHHHHHhh-cCCcHHhc
Confidence            34444445555556 88888875

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.67  E-value=1.9e-17  Score=152.45  Aligned_cols=156  Identities=17%  Similarity=0.196  Sum_probs=117.9

Q ss_pred             CCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----------
Q 045092           93 ENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----------  159 (307)
Q Consensus        93 ~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----------  159 (307)
                      .++||.|.||+||-|+. ++|+.||||.+.+.  ......++++|+++|.+++||.||.|--.|..+...          
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD  648 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD  648 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence            47999999999999994 58999999998754  233457899999999999999999988777655211          


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVG  728 (888)
T KOG4236|consen  649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVG  728 (888)
T ss_pred             HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhcC
Confidence                                                                                            


Q ss_pred             CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHH
Q 045092          160 PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTS  239 (307)
Q Consensus       160 t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  239 (307)
                      |+.|+|||++.+..|+...|+||.||++|--++|..||...     ..+.+.+..       ...+..+..=.+.....+
T Consensus       729 TPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd-----EdIndQIQN-------AaFMyPp~PW~eis~~Ai  796 (888)
T KOG4236|consen  729 TPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED-----EDINDQIQN-------AAFMYPPNPWSEISPEAI  796 (888)
T ss_pred             CccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc-----cchhHHhhc-------cccccCCCchhhcCHHHH
Confidence            99999999999999999999999999999999999999532     222222111       122222222234455777


Q ss_pred             HHhccccCCCCCCCCCCHHHHH
Q 045092          240 DGNDQCSSSVTPTNRPLMSFVV  261 (307)
Q Consensus       240 ~l~~~C~~~~dP~~RPs~~~vl  261 (307)
                      +++..-+ +..-.+|.+..+-+
T Consensus       797 dlIn~LL-qVkm~kRysvdk~l  817 (888)
T KOG4236|consen  797 DLINNLL-QVKMRKRYSVDKSL  817 (888)
T ss_pred             HHHHHHH-HHHHHHhcchHhhc
Confidence            7777777 88888888876543

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.66  E-value=2.9e-16  Score=136.42  Aligned_cols=135  Identities=20%  Similarity=0.150  Sum_probs=100.1

Q ss_pred             CCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------------------
Q 045092           99 RGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------------------  159 (307)
Q Consensus        99 G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------------------  159 (307)
                      |.||.||++.. .+++.+|+|.+....     .+.+|...+....|+||+++++++.+....                  
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence            89999999994 478999999986542     234455556666799999999876543110                  


Q ss_pred             ------------------------------------------------------------------CccccchhhhccCC
Q 045092          160 ------------------------------------------------------------------PIVYMAPEYAKHGY  173 (307)
Q Consensus       160 ------------------------------------------------------------------t~~y~aPE~~~~~~  173 (307)
                                                                                        +..|+|||++..+.
T Consensus        79 ~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  158 (237)
T cd05576          79 FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGGISE  158 (237)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccCCCC
Confidence                                                                              44699999998888


Q ss_pred             CCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCC
Q 045092          174 LTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTN  253 (307)
Q Consensus       174 ~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~  253 (307)
                      ++.++||||+|++++||++|+.|+......                  ........++..++..+.+++.+|+ +.||++
T Consensus       159 ~~~~~DvwslG~il~el~~g~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~li~~~l-~~dp~~  219 (237)
T cd05576         159 ETEACDWWSLGAILFELLTGKTLVECHPSG------------------INTHTTLNIPEWVSEEARSLLQQLL-QFNPTE  219 (237)
T ss_pred             CCchhhHHHHHHHHHHHHHCcchhhcCchh------------------cccccccCCcccCCHHHHHHHHHHc-cCCHHH
Confidence            999999999999999999999887422110                  0111111233445668889999999 999999


Q ss_pred             CCCH
Q 045092          254 RPLM  257 (307)
Q Consensus       254 RPs~  257 (307)
                      ||++
T Consensus       220 R~~~  223 (237)
T cd05576         220 RLGA  223 (237)
T ss_pred             hcCC
Confidence            9996

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.63  E-value=1.7e-16  Score=142.51  Aligned_cols=153  Identities=14%  Similarity=0.166  Sum_probs=103.6

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh---hcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC----
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK---QGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK----  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~----  158 (307)
                      .+|....+||+|+||.|.++..+ +.+.+|||++++.-.   .+.+--..|-++|.-. +-|.+++++.++..-+.    
T Consensus       349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV  428 (683)
T KOG0696|consen  349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV  428 (683)
T ss_pred             cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence            46777899999999999999954 668899999976421   1223334555555544 45666666554433211    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       429 MEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTk  508 (683)
T KOG0696|consen  429 MEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTTK  508 (683)
T ss_pred             EEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccCCccee
Confidence                                                                                            


Q ss_pred             ---CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhH
Q 045092          159 ---QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFY  235 (307)
Q Consensus       159 ---~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  235 (307)
                         +|+-|+|||.+....|...+|.|||||+||||+.|++||++.+..+   +.    ..+.+.+       -..+...+
T Consensus       509 TFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e---lF----~aI~ehn-------vsyPKslS  574 (683)
T KOG0696|consen  509 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE---LF----QAIMEHN-------VSYPKSLS  574 (683)
T ss_pred             eecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHH---HH----HHHHHcc-------CcCccccc
Confidence               1999999999999999999999999999999999999997654322   21    1122211       12234445


Q ss_pred             HHHHHHhccccCCCCCCCCC
Q 045092          236 RRTSDGNDQCSSSVTPTNRP  255 (307)
Q Consensus       236 ~~~~~l~~~C~~~~dP~~RP  255 (307)
                      .+...+...-+ ...|.+|-
T Consensus       575 kEAv~ickg~l-tK~P~kRL  593 (683)
T KOG0696|consen  575 KEAVAICKGLL-TKHPGKRL  593 (683)
T ss_pred             HHHHHHHHHHh-hcCCcccc
Confidence            55555555555 66777774

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.62  E-value=4.3e-16  Score=125.88  Aligned_cols=110  Identities=16%  Similarity=0.314  Sum_probs=89.4

Q ss_pred             CcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           89 NFASENEISERGFGPVYRGL-LADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      +|+..++||+|.||+||+|+ ..+++.||+|.+...  +..-....++||-+++.++|.|||++++....+...      
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~   82 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence            45666899999999999999 567899999988744  233356789999999999999999998766544111      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        83 cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcysaev  162 (292)
T KOG0662|consen   83 CDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEV  162 (292)
T ss_pred             hhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeecee
Confidence                                                                                            


Q ss_pred             -CccccchhhhccCC-CCchhHHHHHHHHHHHHHhCCCCCc
Q 045092          160 -PIVYMAPEYAKHGY-LTDKAEVCSFGIVTLEIESGRSNVI  198 (307)
Q Consensus       160 -t~~y~aPE~~~~~~-~~~~sDV~s~Gvvl~elltg~~p~~  198 (307)
                       |..|.+|.++.+.+ |++..|+||-||++.|+.-..+|..
T Consensus       163 vtlwyrppdvlfgakly~tsidmwsagcifaelanagrplf  203 (292)
T KOG0662|consen  163 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLF  203 (292)
T ss_pred             eeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCC
Confidence             88899999887754 7889999999999999998666653

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.62  E-value=6e-16  Score=134.55  Aligned_cols=114  Identities=21%  Similarity=0.319  Sum_probs=90.9

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEEc---C--CCEEEEEEccCCChh--cHHHHHHHHHHHhhCCCCCccceeeeeecCCC
Q 045092           86 ATNNFASENEISERGFGPVYRGLLA---D--GKVIEVKQLSSKSKQ--GNREIVNEIGMISALQHPNLVKLYRLCTETLK  158 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~~---~--~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  158 (307)
                      ....|+....||+|.||.||++...   +  .+.+|||+++.....  -.....+|+.+++.++|+||+.|..++...+.
T Consensus        22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~  101 (438)
T KOG0666|consen   22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK  101 (438)
T ss_pred             HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence            3457888899999999999999732   2  237899999765332  23467889999999999999999877765311


Q ss_pred             C-------------------------------------------------------------------------------
Q 045092          159 Q-------------------------------------------------------------------------------  159 (307)
Q Consensus       159 ~-------------------------------------------------------------------------------  159 (307)
                      .                                                                               
T Consensus       102 ~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlG  181 (438)
T KOG0666|consen  102 KVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLG  181 (438)
T ss_pred             eEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeeccc
Confidence            0                                                                               


Q ss_pred             --------------------CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcC
Q 045092          160 --------------------PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVIC  199 (307)
Q Consensus       160 --------------------t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~  199 (307)
                                          |+.|.|||.+.+. .|+...|||+.|||+.||+|-.+-|..
T Consensus       182 laR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g  242 (438)
T KOG0666|consen  182 LARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG  242 (438)
T ss_pred             HHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence                                8899999998875 589999999999999999998776643

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.60  E-value=1e-16  Score=145.07  Aligned_cols=163  Identities=18%  Similarity=0.289  Sum_probs=115.1

Q ss_pred             CcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCC-C------hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-
Q 045092           89 NFASENEISERGFGPVYRGL-LADGKVIEVKQLSSK-S------KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~-~------~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-  159 (307)
                      .|-..++||+|||+.||++. +...+.||||+-... +      ....+...+|-.+.+.|.||.||++|+|+.-+... 
T Consensus       464 RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsF  543 (775)
T KOG1151|consen  464 RYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSF  543 (775)
T ss_pred             HHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccc
Confidence            46677889999999999999 556788999975422 1      11234467899999999999999999987644111 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       544 CTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIM  623 (775)
T KOG1151|consen  544 CTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIM  623 (775)
T ss_pred             eeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhc
Confidence                                                                                            


Q ss_pred             -------------------CccccchhhhccC----CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHH
Q 045092          160 -------------------PIVYMAPEYAKHG----YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYL  216 (307)
Q Consensus       160 -------------------t~~y~aPE~~~~~----~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~  216 (307)
                                         |..|++||.+.-|    +++.|+||||.||++|..+.|+.||.+.....  .+       +
T Consensus       624 dddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ--dI-------L  694 (775)
T KOG1151|consen  624 DDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ--DI-------L  694 (775)
T ss_pred             cCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH--HH-------H
Confidence                               8889999977644    58899999999999999999999996433221  11       1


Q ss_pred             HhhhhhcccccCCCc--hhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          217 KRARKLNGASCSKFG--FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       217 ~~~~~~~~~~~~~l~--~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ..+. +.....-.++  .-...+..+++.+|+ +..-++|....++..
T Consensus       695 qeNT-IlkAtEVqFP~KPvVsseAkaFIRRCL-aYRKeDR~DV~qLA~  740 (775)
T KOG1151|consen  695 QENT-ILKATEVQFPPKPVVSSEAKAFIRRCL-AYRKEDRIDVQQLAC  740 (775)
T ss_pred             hhhc-hhcceeccCCCCCccCHHHHHHHHHHH-HhhhhhhhhHHHHcc
Confidence            1111 2111111111  123347888999999 988888887766643

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.60  E-value=4.2e-15  Score=141.96  Aligned_cols=61  Identities=13%  Similarity=0.341  Sum_probs=42.9

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEE-----------------cCCCEEEEEEccCCChhcHHHH--------------HHH
Q 045092           86 ATNNFASENEISERGFGPVYRGLL-----------------ADGKVIEVKQLSSKSKQGNREI--------------VNE  134 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~-----------------~~~~~vAvK~~~~~~~~~~~~~--------------~~E  134 (307)
                      ..++|++.++||+|+||.||+|..                 ..++.||||++........++|              ..|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            467999999999999999999963                 2356799999865433323333              346


Q ss_pred             HHHHhhCCCCCc
Q 045092          135 IGMISALQHPNL  146 (307)
Q Consensus       135 ~~~l~~l~h~ni  146 (307)
                      +..+.+++|.|+
T Consensus       223 ~~~l~~l~~~~l  234 (507)
T PLN03224        223 AYMCAKIKRNPI  234 (507)
T ss_pred             HHHHHHhhcccc
Confidence            666667765544

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.60  E-value=5.2e-15  Score=147.09  Aligned_cols=67  Identities=25%  Similarity=0.355  Sum_probs=55.2

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeee
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLC  153 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~  153 (307)
                      .++|.+.+.||+|+||.||+|... +++.||||+++...   ......+.+|+.++..++|+||+++++++
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~   73 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSL   73 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEE
Confidence            367888999999999999999954 78999999986432   22346788999999999999999987654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.60  E-value=2.2e-15  Score=124.61  Aligned_cols=101  Identities=19%  Similarity=0.114  Sum_probs=69.9

Q ss_pred             CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH--
Q 045092          159 QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR--  236 (307)
Q Consensus       159 ~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~--  236 (307)
                      +|+.|||||++.++.++.++|||||||++|||++|+.||.....     +............ -....+.........  
T Consensus        66 g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  139 (176)
T smart00750       66 VDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERE-----LSAILEILLNGMP-ADDPRDRSNLESVSAAR  139 (176)
T ss_pred             CcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccch-----hcHHHHHHHHHhc-cCCccccccHHHHHhhh
Confidence            47899999999999999999999999999999999999853221     1111111111110 000001111122333  


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      ++.+++..|+ ..+|.+||++.++++.+..
T Consensus       140 ~~~~~i~~cl-~~~p~~Rp~~~~ll~~~~~  168 (176)
T smart00750      140 SFADFMRVCA-SRLPQRREAANHYLAHCRA  168 (176)
T ss_pred             hHHHHHHHHH-hcccccccCHHHHHHHHHH
Confidence            6899999999 9999999999999987654

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.60  E-value=4.3e-16  Score=134.80  Aligned_cols=175  Identities=13%  Similarity=0.156  Sum_probs=127.0

Q ss_pred             HhcCcccC-CcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCCC---
Q 045092           86 ATNNFASE-NEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        86 ~t~~f~~~-~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~---  159 (307)
                      .|++|.+. .+||-|-.|.|-.+.. .+++.+|+|++...     ...++|+++.-+. .|+|||++++++......   
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc  133 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKC  133 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence            46777764 5899999999999985 48899999998543     3456788876666 799999999987654211   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       134 LLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~  213 (400)
T KOG0604|consen  134 LLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKE  213 (400)
T ss_pred             eEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccc
Confidence                                                                                            


Q ss_pred             ------------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhccccc
Q 045092          160 ------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC  227 (307)
Q Consensus       160 ------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  227 (307)
                                  |++|.|||++...+|+...|+||+||++|-|+.|-+||.....   ..+..-++..+..+.  ..+-.
T Consensus       214 t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg---~aispgMk~rI~~gq--y~FP~  288 (400)
T KOG0604|consen  214 TQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG---LAISPGMKRRIRTGQ--YEFPE  288 (400)
T ss_pred             cCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCC---ccCChhHHhHhhccC--ccCCC
Confidence                        9999999999999999999999999999999999999975433   222223444444443  22222


Q ss_pred             CCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH--Hhcccccccc
Q 045092          228 SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS--MLEDKAEVCS  272 (307)
Q Consensus       228 ~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~--~L~~~~~v~~  272 (307)
                      +.- ...+....+++...+ ..+|.+|-|+.+++.  .+.....|+.
T Consensus       289 pEW-s~VSe~aKdlIR~LL-kt~PteRlTI~~~m~hpwi~~~~~vp~  333 (400)
T KOG0604|consen  289 PEW-SCVSEAAKDLIRKLL-KTEPTERLTIEEVMDHPWINQYEAVPQ  333 (400)
T ss_pred             hhH-hHHHHHHHHHHHHHh-cCCchhheeHHHhhcCchhcccccCCC
Confidence            211 123446677777777 999999999999975  3444444443

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.58  E-value=6.8e-16  Score=132.11  Aligned_cols=161  Identities=19%  Similarity=0.267  Sum_probs=124.3

Q ss_pred             CCcccCCCCeeEEEEEEcCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----------
Q 045092           93 ENEISERGFGPVYRGLLADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----------  159 (307)
Q Consensus        93 ~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----------  159 (307)
                      ..+|.+...|..|+|++. |..+++|++.-.  .....++|..|.-.|+-+.||||..++|.|..+...           
T Consensus       195 ~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs  273 (448)
T KOG0195|consen  195 ITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS  273 (448)
T ss_pred             hhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence            357888899999999986 445666776532  334456899999999999999999999999876322           


Q ss_pred             ---------------------------------------------------------------------------Ccccc
Q 045092          160 ---------------------------------------------------------------------------PIVYM  164 (307)
Q Consensus       160 ---------------------------------------------------------------------------t~~y~  164 (307)
                                                                                                 .+.||
T Consensus       274 lynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~pawm  353 (448)
T KOG0195|consen  274 LYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSPAWM  353 (448)
T ss_pred             HHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeeccccccCcccC
Confidence                                                                                       78899


Q ss_pred             chhhhccCCC---CchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHH
Q 045092          165 APEYAKHGYL---TDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDG  241 (307)
Q Consensus       165 aPE~~~~~~~---~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l  241 (307)
                      +||.+....-   -..+|+|||.+++||+.|...||..-.+.+..      ...      ..+...+.++......+..+
T Consensus       354 spealqrkped~n~raadmwsfaillwel~trevpfadlspmecg------mki------aleglrv~ippgis~hm~kl  421 (448)
T KOG0195|consen  354 SPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG------MKI------ALEGLRVHIPPGISRHMNKL  421 (448)
T ss_pred             CHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh------hhh------hhccccccCCCCccHHHHHH
Confidence            9999876543   25699999999999999999999644433211      000      23445566667777889999


Q ss_pred             hccccCCCCCCCCCCHHHHHHHhccc
Q 045092          242 NDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       242 ~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      +.-|+ ..||.+||.+..|+-.|+..
T Consensus       422 m~icm-nedpgkrpkfdmivpilekm  446 (448)
T KOG0195|consen  422 MNICM-NEDPGKRPKFDMIVPILEKM  446 (448)
T ss_pred             HHHHh-cCCCCcCCCcceehhhHHHh
Confidence            99999 99999999999999888764

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.58  E-value=1.9e-16  Score=140.88  Aligned_cols=180  Identities=16%  Similarity=0.179  Sum_probs=119.4

Q ss_pred             ccHHHHHHHhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCC--C----Ccccee
Q 045092           78 FHLRQIKAATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQH--P----NLVKLY  150 (307)
Q Consensus        78 ~~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h--~----niv~l~  150 (307)
                      |...+..  ++.|.+...+|+|.||.|-.+.. .++..||||+++... ...+.-+-|+++|.++.+  |    -+|++.
T Consensus        81 ~~~gD~l--~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~  157 (415)
T KOG0671|consen   81 YQVGDIL--TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMR  157 (415)
T ss_pred             EEecccc--ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeee
Confidence            4444443  78899999999999999999984 367899999986543 234456679999998832  2    244443


Q ss_pred             eeeecCCCC-----------------------------------------------------------------------
Q 045092          151 RLCTETLKQ-----------------------------------------------------------------------  159 (307)
Q Consensus       151 g~~~~~~~~-----------------------------------------------------------------------  159 (307)
                      +++.-..+.                                                                       
T Consensus       158 ~wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k  237 (415)
T KOG0671|consen  158 DWFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPK  237 (415)
T ss_pred             hhhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccC
Confidence            333211000                                                                       


Q ss_pred             ----------------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCc
Q 045092          160 ----------------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDK  205 (307)
Q Consensus       160 ----------------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~  205 (307)
                                                        |..|.|||++.+-..+..+||||+||||.|+.||..-|......+.
T Consensus       238 ~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EH  317 (415)
T KOG0671|consen  238 KKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEH  317 (415)
T ss_pred             CccceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHH
Confidence                                              8899999999999999999999999999999999998865553332


Q ss_pred             ccHHHHHH--------------HHHHhhhhhc-----------ccccCCCch--------hhHHHHHHHhccccCCCCCC
Q 045092          206 FYLLDWLG--------------SYLKRARKLN-----------GASCSKFGF--------KFYRRTSDGNDQCSSSVTPT  252 (307)
Q Consensus       206 ~~l~~~~~--------------~~~~~~~~~~-----------~~~~~~l~~--------~~~~~~~~l~~~C~~~~dP~  252 (307)
                      ..+.+.+.              .+...+. +.           ...++-.+.        ....++.+++..++ ..||.
T Consensus       318 LaMMerIlGp~P~~mi~r~~~~Kyf~~~r-ldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL-~fDP~  395 (415)
T KOG0671|consen  318 LAMMERILGPIPSRMIKKTRKEKYFRRGR-LDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRML-EFDPA  395 (415)
T ss_pred             HHHHHHhhCCCcHHHhhhhhhHhhhhccc-ccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHH-ccCcc
Confidence            22222111              0011110 00           000000010        11127889999999 99999


Q ss_pred             CCCCHHHHHH
Q 045092          253 NRPLMSFVVS  262 (307)
Q Consensus       253 ~RPs~~~vl~  262 (307)
                      +|+|+.|++.
T Consensus       396 ~RiTl~EAL~  405 (415)
T KOG0671|consen  396 RRITLREALS  405 (415)
T ss_pred             ccccHHHHhc
Confidence            9999999875

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.58  E-value=4.6e-16  Score=142.79  Aligned_cols=157  Identities=17%  Similarity=0.238  Sum_probs=114.0

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCC-CEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGLLADG-KVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK----  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~-~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~----  158 (307)
                      ..++.....||-||||+|-+...... ..+|+|++++.   +....+....|-.+|...+.+.||+||-.+.+...    
T Consensus       419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmL  498 (732)
T KOG0614|consen  419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYML  498 (732)
T ss_pred             hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhh
Confidence            34566778899999999999996533 34889988754   23334568889999999999999999866554310    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       499 mEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwT  578 (732)
T KOG0614|consen  499 MEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWT  578 (732)
T ss_pred             HHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCCceee
Confidence                                                                                            


Q ss_pred             --CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          159 --QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       159 --~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                        +|+-|.|||.+.+...+..+|.||+|++++||++|.+||...++....++       +-.|  +..+   .++.....
T Consensus       579 FcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~-------ILkG--id~i---~~Pr~I~k  646 (732)
T KOG0614|consen  579 FCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNL-------ILKG--IDKI---EFPRRITK  646 (732)
T ss_pred             ecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHH-------HHhh--hhhh---hcccccch
Confidence              19999999999999999999999999999999999999976554332211       1111  1111   22334444


Q ss_pred             HHHHHhccccCCCCCCCCCC
Q 045092          237 RTSDGNDQCSSSVTPTNRPL  256 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs  256 (307)
                      ...+++..-+ ..+|.+|--
T Consensus       647 ~a~~Lik~LC-r~~P~ERLG  665 (732)
T KOG0614|consen  647 TATDLIKKLC-RDNPTERLG  665 (732)
T ss_pred             hHHHHHHHHH-hcCcHhhhc
Confidence            6666776666 889999864

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.58  E-value=2.3e-16  Score=148.70  Aligned_cols=166  Identities=19%  Similarity=0.299  Sum_probs=125.0

Q ss_pred             HHhcCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           85 AATNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        85 ~~t~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      ...++|+....+|.|.||.|||++ ..+++..|||.++.....+..-...|+-+++..+|+|||.++|.+......    
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM   91 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM   91 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence            345788999999999999999999 568999999999877666677788999999999999999998755432111    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        92 EycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~Krks  171 (829)
T KOG0576|consen   92 EYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKS  171 (829)
T ss_pred             EecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhhhhhc
Confidence                                                                                            


Q ss_pred             ---Cccccchhhhc---cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCch-
Q 045092          160 ---PIVYMAPEYAK---HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGF-  232 (307)
Q Consensus       160 ---t~~y~aPE~~~---~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~-  232 (307)
                         |++|||||+..   .|.|.+++|||+.|+...|+.--++|.....+.....+       ..    -...-.|.+.+ 
T Consensus       172 fiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~L-------mT----kS~~qpp~lkDk  240 (829)
T KOG0576|consen  172 FIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFL-------MT----KSGFQPPTLKDK  240 (829)
T ss_pred             ccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHH-------hh----ccCCCCCcccCC
Confidence               99999999764   67899999999999999999998888743222221111       11    01122233322 


Q ss_pred             -hhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          233 -KFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       233 -~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                       .-...+.+++..|+ ..+|.+||+++.++.
T Consensus       241 ~kws~~fh~fvK~al-tknpKkRptaeklL~  270 (829)
T KOG0576|consen  241 TKWSEFFHNFVKGAL-TKNPKKRPTAEKLLQ  270 (829)
T ss_pred             ccchHHHHHHHHHHh-cCCCccCCChhhhee
Confidence             23447889999999 999999999886543

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.58  E-value=2.1e-15  Score=126.21  Aligned_cols=168  Identities=14%  Similarity=0.210  Sum_probs=121.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCC-CCCccceeeeeecCCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISALQ-HPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~-----  159 (307)
                      .++|++.+++|+|.|+.||.|. ..+++.++||+++...   .+...+|+.+|..+. |+||++|++...++...     
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi  113 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI  113 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence            4678889999999999999999 5678899999996543   357889999999996 99999999988776322     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       114 FE~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVRV  193 (338)
T KOG0668|consen  114 FEYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV  193 (338)
T ss_pred             hhhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCceeeeee
Confidence                                                                                            


Q ss_pred             -Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHH--------HHHHhhhhhcccccCC
Q 045092          160 -PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLG--------SYLKRARKLNGASCSK  229 (307)
Q Consensus       160 -t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~--------~~~~~~~~~~~~~~~~  229 (307)
                       +..|-.||.+.. ..|+...|+|||||+|.+|+..+.||.+..... ..++..+.        ..+..   ..-..+|.
T Consensus       194 ASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~-DQLVkIakVLGt~el~~Yl~K---Y~i~Ldp~  269 (338)
T KOG0668|consen  194 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY-DQLVKIAKVLGTDELYAYLNK---YQIDLDPQ  269 (338)
T ss_pred             ehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCH-HHHHHHHHHhChHHHHHHHHH---HccCCChh
Confidence             667888997764 568889999999999999999999997544322 22222111        11111   11112222


Q ss_pred             Cch--------------------hhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          230 FGF--------------------KFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       230 l~~--------------------~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      +..                    -...+.+++.-.-+ ..|..+|+|+.|.+.
T Consensus       270 ~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklL-rYDHqeRlTakEam~  321 (338)
T KOG0668|consen  270 FEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLL-RYDHQERLTAKEAMA  321 (338)
T ss_pred             HhhHhhccccccHHHhCCccccccCChHHHHHHHHHH-hhccccccchHHHhc
Confidence            211                    11236778888888 899999999998754

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.57  E-value=1.3e-16  Score=135.08  Aligned_cols=173  Identities=16%  Similarity=0.214  Sum_probs=116.7

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccC--CChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSS--KSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      .|....+||+|.||.||+++. ++|+.||+|++-.  ....-...-++|+++|..+.|+|++.+++.|......      
T Consensus        18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~   97 (376)
T KOG0669|consen   18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA   97 (376)
T ss_pred             HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence            355567899999999999994 4678899887542  2223345678999999999999999998887643110      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        98 t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~  177 (376)
T KOG0669|consen   98 TFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFSTS  177 (376)
T ss_pred             eeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccceecc
Confidence                                                                                            


Q ss_pred             -------------Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHH--------H
Q 045092          160 -------------PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYL--------K  217 (307)
Q Consensus       160 -------------t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~--------~  217 (307)
                                   |..|.+||.+.+ ..|+.+.|||+-||++.||.||.+-+..........++..+...+        .
T Consensus       178 ~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d  257 (376)
T KOG0669|consen  178 KNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVD  257 (376)
T ss_pred             cccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcc
Confidence                         888999998876 468999999999999999999988776443333222222111000        0


Q ss_pred             hhhhhcccc-cCCCchhh-------------HHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          218 RARKLNGAS-CSKFGFKF-------------YRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       218 ~~~~~~~~~-~~~l~~~~-------------~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .-. +...+ .+.++...             +.+..+++-..+ ..||.+|+.++++++.
T Consensus       258 ~lp-L~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll-~~DP~kR~~ad~alnh  315 (376)
T KOG0669|consen  258 NLP-LYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLL-KLDPTKRIDADQALNH  315 (376)
T ss_pred             cch-HHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHh-ccCcccCcchHhhhch
Confidence            000 11111 11121110             115567777778 9999999999998765

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.56  E-value=6.3e-16  Score=149.00  Aligned_cols=154  Identities=19%  Similarity=0.207  Sum_probs=110.5

Q ss_pred             cccCCcccCCCCee-EEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCC----------
Q 045092           90 FASENEISERGFGP-VYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETL----------  157 (307)
Q Consensus        90 f~~~~~lG~G~~g~-Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~----------  157 (307)
                      |...+.+|.|+-|+ ||+|.+. |+.||||++-..   ..+...+||+.|..- .|+|||++|+.-.+..          
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~  586 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA  586 (903)
T ss_pred             eccHHHcccCCCCcEEEEEeeC-CceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence            34446689998886 7999984 789999998433   334567999999998 7999999987543320          


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          158 --------------------------------------------------------------------------------  157 (307)
Q Consensus       158 --------------------------------------------------------------------------------  157 (307)
                                                                                                      
T Consensus       587 ~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~s  666 (903)
T KOG1027|consen  587 CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKS  666 (903)
T ss_pred             hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcc
Confidence                                                                                            


Q ss_pred             --------CCCccccchhhhccCCCCchhHHHHHHHHHHHHHhC-CCCCcCCCccCcccHHHHHHHHHHhhhhhcccccC
Q 045092          158 --------KQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESG-RSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCS  228 (307)
Q Consensus       158 --------~~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg-~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  228 (307)
                              .+|-+|+|||.+....-+..+||+|+||++|..++| ..||......+...        +.... -...+ .
T Consensus       667 S~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NI--------l~~~~-~L~~L-~  736 (903)
T KOG1027|consen  667 SFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANI--------LTGNY-TLVHL-E  736 (903)
T ss_pred             hhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhh--------hcCcc-ceeee-c
Confidence                    008899999999998888899999999999999995 89995333222111        11110 00001 1


Q ss_pred             CCchhhHHHHHHHhccccCCCCCCCCCCHHHHH
Q 045092          229 KFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVV  261 (307)
Q Consensus       229 ~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl  261 (307)
                      .+...   +..+++.+++ ..+|..||++.+|+
T Consensus       737 ~~~d~---eA~dLI~~ml-~~dP~~RPsa~~VL  765 (903)
T KOG1027|consen  737 PLPDC---EAKDLISRML-NPDPQLRPSATDVL  765 (903)
T ss_pred             cCchH---HHHHHHHHhc-CCCcccCCCHHHHh
Confidence            11111   7788899999 99999999999997

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.53  E-value=1.8e-14  Score=140.39  Aligned_cols=37  Identities=22%  Similarity=0.416  Sum_probs=32.2

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEEc-C----CCEEEEEEccC
Q 045092           86 ATNNFASENEISERGFGPVYRGLLA-D----GKVIEVKQLSS  122 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~~-~----~~~vAvK~~~~  122 (307)
                      ..++|...+.||+|+||.||+|... +    +..||||++..
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~  171 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATE  171 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecc
Confidence            5689999999999999999999964 5    68999998753

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.51  E-value=1.1e-14  Score=120.21  Aligned_cols=117  Identities=20%  Similarity=0.304  Sum_probs=92.7

Q ss_pred             HHHHhcCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCC-ChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCCC
Q 045092           83 IKAATNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSK-SKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLKQ  159 (307)
Q Consensus        83 l~~~t~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~  159 (307)
                      ++...++...+..||+|+||.|-+-+ ..+|+..|+|.+... ..+..+..++|+.+..+. ..|.+|.+||.......-
T Consensus        41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdv  120 (282)
T KOG0984|consen   41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDV  120 (282)
T ss_pred             cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccE
Confidence            34445555667889999999999888 458999999999754 344567889999987776 799999999976543110


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       121 wIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~  200 (282)
T KOG0984|consen  121 WICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLV  200 (282)
T ss_pred             EEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeeh
Confidence                                                                                            


Q ss_pred             ----------Cccccchhhhcc----CCCCchhHHHHHHHHHHHHHhCCCCCcC
Q 045092          160 ----------PIVYMAPEYAKH----GYLTDKAEVCSFGIVTLEIESGRSNVIC  199 (307)
Q Consensus       160 ----------t~~y~aPE~~~~----~~~~~~sDV~s~Gvvl~elltg~~p~~~  199 (307)
                                --.|||||-+..    ..|+-|+||||+|+.+.||.+++.||+.
T Consensus       201 dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~  254 (282)
T KOG0984|consen  201 DSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES  254 (282)
T ss_pred             hhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence                      346999998763    3689999999999999999999999963

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.49  E-value=3.2e-13  Score=113.06  Aligned_cols=123  Identities=28%  Similarity=0.485  Sum_probs=101.9

Q ss_pred             ccCCCCeeEEEEEEc-CCCEEEEEEccCCChh-cHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--------------
Q 045092           96 ISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQ-GNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--------------  159 (307)
Q Consensus        96 lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--------------  159 (307)
                      ||+|++|.||++... +++.+++|.+...... ....+.+|++.+..+.|++|+++++++......              
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            689999999999965 4899999998765432 346799999999999999999999887652000              


Q ss_pred             ---------------------------------------------------------------------------Ccccc
Q 045092          160 ---------------------------------------------------------------------------PIVYM  164 (307)
Q Consensus       160 ---------------------------------------------------------------------------t~~y~  164 (307)
                                                                                                 ...|+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~  160 (215)
T cd00180          81 LLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYM  160 (215)
T ss_pred             HHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCcc
Confidence                                                                                       44689


Q ss_pred             chhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhc
Q 045092          165 APEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGND  243 (307)
Q Consensus       165 aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~  243 (307)
                      +||..... ..+.+.|+|++|+++++|                                             ..+.+++.
T Consensus       161 ~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------------------~~~~~~l~  195 (215)
T cd00180         161 APEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------------------PELKDLIR  195 (215)
T ss_pred             ChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------------------HHHHHHHH
Confidence            99988877 788999999999999999                                             26677888


Q ss_pred             cccCCCCCCCCCCHHHHHHHh
Q 045092          244 QCSSSVTPTNRPLMSFVVSML  264 (307)
Q Consensus       244 ~C~~~~dP~~RPs~~~vl~~L  264 (307)
                      .|+ +.+|++||++.++++.+
T Consensus       196 ~~l-~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         196 KML-QKDPEKRPSAKEILEHL  215 (215)
T ss_pred             HHh-hCCcccCcCHHHHhhCC
Confidence            999 99999999999998653

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.49  E-value=2.3e-13  Score=115.99  Aligned_cols=110  Identities=25%  Similarity=0.445  Sum_probs=91.0

Q ss_pred             cccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChh-cHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--------
Q 045092           90 FASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQ-GNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--------  159 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--------  159 (307)
                      |...+.||+|++|.||++... +++.+|+|.+...... ..+.+.+|++.+.+++|+|++++++++......        
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            456788999999999999965 4889999999765444 567899999999999999999999876642100        


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~  160 (225)
T smart00221       81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTVK  160 (225)
T ss_pred             CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccccccee
Confidence                                                                                            


Q ss_pred             -Cccccchhhh-ccCCCCchhHHHHHHHHHHHHHhCCCCCcC
Q 045092          160 -PIVYMAPEYA-KHGYLTDKAEVCSFGIVTLEIESGRSNVIC  199 (307)
Q Consensus       160 -t~~y~aPE~~-~~~~~~~~sDV~s~Gvvl~elltg~~p~~~  199 (307)
                       +..|++||.+ ....++.++|||+||++++||++|+.||..
T Consensus       161 ~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      161 GTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             ccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence             3349999988 666778899999999999999999999953

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.49  E-value=7.4e-15  Score=145.59  Aligned_cols=120  Identities=17%  Similarity=0.200  Sum_probs=98.5

Q ss_pred             cHHHHHHHhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeee
Q 045092           79 HLRQIKAATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCT  154 (307)
Q Consensus        79 ~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~  154 (307)
                      ...+++.-.++|.+.++||+|+||.|..++. .+++.+|+|++++.   .......|..|-.+|...+.+-|++|+-.|.
T Consensus        66 ~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQ  145 (1317)
T KOG0612|consen   66 KVKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQ  145 (1317)
T ss_pred             HHHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhc
Confidence            4567777789999999999999999999995 47899999999763   2334457889999998888888887765555


Q ss_pred             cCCCC---------------------------------------------------------------------------
Q 045092          155 ETLKQ---------------------------------------------------------------------------  159 (307)
Q Consensus       155 ~~~~~---------------------------------------------------------------------------  159 (307)
                      +....                                                                           
T Consensus       146 D~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm  225 (1317)
T KOG0612|consen  146 DERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKM  225 (1317)
T ss_pred             CccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhc
Confidence            43111                                                                           


Q ss_pred             -------------Cccccchhhhc----c-CCCCchhHHHHHHHHHHHHHhCCCCCc
Q 045092          160 -------------PIVYMAPEYAK----H-GYLTDKAEVCSFGIVTLEIESGRSNVI  198 (307)
Q Consensus       160 -------------t~~y~aPE~~~----~-~~~~~~sDV~s~Gvvl~elltg~~p~~  198 (307)
                                   ||-|++||++.    + |.|...+|.||+||++|||+.|..||.
T Consensus       226 ~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFY  282 (1317)
T KOG0612|consen  226 DADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFY  282 (1317)
T ss_pred             CCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcch
Confidence                         99999999885    2 679999999999999999999999996

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.46  E-value=3.6e-13  Score=123.47  Aligned_cols=69  Identities=12%  Similarity=0.256  Sum_probs=54.7

Q ss_pred             hcCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCC-----C---CCccceeeeeecC
Q 045092           87 TNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISALQ-----H---PNLVKLYRLCTET  156 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~l~g~~~~~  156 (307)
                      ...|.+.++||-|.|++||++. ..+.+.||+|+.+.. ....+.-+.||++|++++     |   ..||+|+++|...
T Consensus        77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs  154 (590)
T KOG1290|consen   77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS  154 (590)
T ss_pred             CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence            3578899999999999999998 557889999998543 344456788999999883     2   3799999888654

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.44  E-value=1.1e-13  Score=130.34  Aligned_cols=127  Identities=18%  Similarity=0.231  Sum_probs=102.7

Q ss_pred             ccHHHHHHHh---cCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCCCh---hcHHHHHHHHHHHhhCCCCCcccee
Q 045092           78 FHLRQIKAAT---NNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSK---QGNREIVNEIGMISALQHPNLVKLY  150 (307)
Q Consensus        78 ~~~~el~~~t---~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~  150 (307)
                      -.|-.|+.+.   .-|..++.||-|+||.|.++. .++...+|+|.|.+.+.   ........|-.||.....+-||+||
T Consensus       616 SnYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLy  695 (1034)
T KOG0608|consen  616 SNYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLY  695 (1034)
T ss_pred             hhHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEE
Confidence            3444454443   348888999999999999998 66778899999976543   2344678899999999999999999


Q ss_pred             eeeecCCCC-----------------------------------------------------------------------
Q 045092          151 RLCTETLKQ-----------------------------------------------------------------------  159 (307)
Q Consensus       151 g~~~~~~~~-----------------------------------------------------------------------  159 (307)
                      -.|.+.+..                                                                       
T Consensus       696 ySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGL  775 (1034)
T KOG0608|consen  696 YSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL  775 (1034)
T ss_pred             EEeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccc
Confidence            777665221                                                                       


Q ss_pred             ----------------------------------------------------------CccccchhhhccCCCCchhHHH
Q 045092          160 ----------------------------------------------------------PIVYMAPEYAKHGYLTDKAEVC  181 (307)
Q Consensus       160 ----------------------------------------------------------t~~y~aPE~~~~~~~~~~sDV~  181 (307)
                                                                                |+.|+|||++....|+..+|.|
T Consensus       776 CTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdww  855 (1034)
T KOG0608|consen  776 CTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWW  855 (1034)
T ss_pred             cccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhh
Confidence                                                                      9999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCCcCCCccC
Q 045092          182 SFGIVTLEIESGRSNVICRTKED  204 (307)
Q Consensus       182 s~Gvvl~elltg~~p~~~~~~~~  204 (307)
                      |.|||||||+.|+.||....+.+
T Consensus       856 s~gvil~em~~g~~pf~~~tp~~  878 (1034)
T KOG0608|consen  856 SVGVILYEMLVGQPPFLADTPGE  878 (1034)
T ss_pred             HhhHHHHHHhhCCCCccCCCCCc
Confidence            99999999999999997655443

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.42  E-value=5.8e-14  Score=130.88  Aligned_cols=111  Identities=16%  Similarity=0.278  Sum_probs=90.8

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh--------hcHHHHHHHHHHHhhCC---CCCccceeeeeec
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK--------QGNREIVNEIGMISALQ---HPNLVKLYRLCTE  155 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~  155 (307)
                      .+|.....+|+|+||.|.+|.++ +...|+||.+.+...        ...-..-.||++|..++   |+||++++++|.+
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd  640 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED  640 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence            46888899999999999999965 567899999865421        11223567999999997   9999999999987


Q ss_pred             CCCC----------------------------------------------------------------------------
Q 045092          156 TLKQ----------------------------------------------------------------------------  159 (307)
Q Consensus       156 ~~~~----------------------------------------------------------------------------  159 (307)
                      ....                                                                            
T Consensus       641 dd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~  720 (772)
T KOG1152|consen  641 DDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYT  720 (772)
T ss_pred             CCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchhhh
Confidence            6221                                                                            


Q ss_pred             ----------CccccchhhhccCCCC-chhHHHHHHHHHHHHHhCCCCCc
Q 045092          160 ----------PIVYMAPEYAKHGYLT-DKAEVCSFGIVTLEIESGRSNVI  198 (307)
Q Consensus       160 ----------t~~y~aPE~~~~~~~~-~~sDV~s~Gvvl~elltg~~p~~  198 (307)
                                |..|.|||++.+..|- ..-|||++|++||.++....||.
T Consensus       721 ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  721 KSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             cCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence                      9999999999987764 56899999999999999888874

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.36  E-value=6.2e-13  Score=114.11  Aligned_cols=114  Identities=19%  Similarity=0.292  Sum_probs=90.4

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      +.+..+-||-|+||.||.... ++|+.||.|++..-  .-...+.+.+|+++|.-++|.|++..++........      
T Consensus        54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY  133 (449)
T KOG0664|consen   54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY  133 (449)
T ss_pred             cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence            445678899999999999884 48999999988543  222346789999999999999999887654332100      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       134 V~TELmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~h  213 (449)
T KOG0664|consen  134 VLTELMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLN  213 (449)
T ss_pred             HHHHHHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhhh
Confidence                                                                                            


Q ss_pred             ------CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCc
Q 045092          160 ------PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTK  202 (307)
Q Consensus       160 ------t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~  202 (307)
                            |.+|.|||.+.+. .|+...||||.||++.|++..+.-|....+
T Consensus       214 MTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~P  263 (449)
T KOG0664|consen  214 MTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGP  263 (449)
T ss_pred             hHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccCh
Confidence                  8899999998875 589999999999999999998887764443

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.32  E-value=2.3e-13  Score=125.61  Aligned_cols=115  Identities=17%  Similarity=0.215  Sum_probs=83.8

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCC------CCccceeeeeecCCCC
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQH------PNLVKLYRLCTETLKQ  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~l~g~~~~~~~~  159 (307)
                      -+.|.+....|+|-|++|.+|.. ..|..||||++.... .-.+.=++|+++|.+|+.      -|+++|+-.|....+.
T Consensus       431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHL  509 (752)
T KOG0670|consen  431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHL  509 (752)
T ss_pred             cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhccee
Confidence            45688888899999999999994 457899999996542 222334567777777631      2444444333221100


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       510 ClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~e  589 (752)
T KOG0670|consen  510 CLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFASE  589 (752)
T ss_pred             EEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCcccccccc
Confidence                                                                                            


Q ss_pred             --------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCc
Q 045092          160 --------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTK  202 (307)
Q Consensus       160 --------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~  202 (307)
                              +..|.|||.+.+-.|+...|+||.||+||||.||+.-|.+...
T Consensus       590 neitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TN  640 (752)
T KOG0670|consen  590 NEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTN  640 (752)
T ss_pred             ccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCc
Confidence                    5569999999999999999999999999999999988865433

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.29  E-value=3.1e-12  Score=115.44  Aligned_cols=72  Identities=25%  Similarity=0.387  Sum_probs=58.0

Q ss_pred             HHHHhcCcccCCcccCCCCeeEEEEEE-c---CCCEEEEEEccCCChhcHHHHHHHHHHHhhC-CCCCccceeeeeecC
Q 045092           83 IKAATNNFASENEISERGFGPVYRGLL-A---DGKVIEVKQLSSKSKQGNREIVNEIGMISAL-QHPNLVKLYRLCTET  156 (307)
Q Consensus        83 l~~~t~~f~~~~~lG~G~~g~Vy~~~~-~---~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~  156 (307)
                      +....+.|...++||+|.|++||++.. .   ..+.||+|.+...+  ......+|+++|..+ .+.||+++.+++...
T Consensus        31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnn  107 (418)
T KOG1167|consen   31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNN  107 (418)
T ss_pred             hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccC
Confidence            445567789999999999999999993 3   46789999986543  345688999999999 689999998877554

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.16  E-value=6.6e-11  Score=103.67  Aligned_cols=110  Identities=17%  Similarity=0.245  Sum_probs=85.8

Q ss_pred             cCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      ..|.-...+|.|.- .|-.+. .-.++.||+|++...  .....+.-.+|..++..++|+||++++.++......     
T Consensus        17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e   95 (369)
T KOG0665|consen   17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE   95 (369)
T ss_pred             eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence            34555677888887 454444 226889999987543  233456778899999999999999999988643110     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        96 ~y~v~e~m~~nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mt  175 (369)
T KOG0665|consen   96 VYLVMELMDANLCQVILMELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMT  175 (369)
T ss_pred             HHHHHHhhhhHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcccccC
Confidence                                                                                            


Q ss_pred             ----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCc
Q 045092          160 ----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVI  198 (307)
Q Consensus       160 ----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~  198 (307)
                          |..|.|||.+-+-.+.+.+||||.||++.||++|+.-|.
T Consensus       176 pyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~  218 (369)
T KOG0665|consen  176 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFP  218 (369)
T ss_pred             chhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEec
Confidence                778999999987779999999999999999999988774

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.15  E-value=1.7e-11  Score=105.33  Aligned_cols=164  Identities=15%  Similarity=0.180  Sum_probs=110.2

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCC-------
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETL-------  157 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~-------  157 (307)
                      .+.|.+.+.||+|-||.+-+++++ +.+.+++|.+... ....++|.+|...--.| .|.||+.-|+.-.+..       
T Consensus        23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q  101 (378)
T KOG1345|consen   23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ  101 (378)
T ss_pred             hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence            356888899999999999999965 6788999988654 34568899998876666 6899987664321110       


Q ss_pred             -------------------------------------------------------------------------------C
Q 045092          158 -------------------------------------------------------------------------------K  158 (307)
Q Consensus       158 -------------------------------------------------------------------------------~  158 (307)
                                                                                                     .
T Consensus       102 E~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~~  181 (378)
T KOG1345|consen  102 EFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYLE  181 (378)
T ss_pred             ccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCceehhhh
Confidence                                                                                           0


Q ss_pred             CCccccchhhhc---cCC--CCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchh
Q 045092          159 QPIVYMAPEYAK---HGY--LTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFK  233 (307)
Q Consensus       159 ~t~~y~aPE~~~---~~~--~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  233 (307)
                      .+..|-+||...   ++.  ....+|||.||++++.++||+.|+......+ ....+|..  +..      ...+.++..
T Consensus       182 ~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d-~~Y~~~~~--w~~------rk~~~~P~~  252 (378)
T KOG1345|consen  182 YVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMD-KPYWEWEQ--WLK------RKNPALPKK  252 (378)
T ss_pred             hhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccC-chHHHHHH--Hhc------ccCccCchh
Confidence            056689999765   343  4677999999999999999999997433322 22333322  221      222333333


Q ss_pred             ---hHHHHHHHhccccCCCCCCCCCCHHHHH
Q 045092          234 ---FYRRTSDGNDQCSSSVTPTNRPLMSFVV  261 (307)
Q Consensus       234 ---~~~~~~~l~~~C~~~~dP~~RPs~~~vl  261 (307)
                         +......+..+-+ ..++++|=.+.++.
T Consensus       253 F~~fs~~a~r~Fkk~l-t~~~~drcki~~~k  282 (378)
T KOG1345|consen  253 FNPFSEKALRLFKKSL-TPRFKDRCKIWTAK  282 (378)
T ss_pred             hcccCHHHHHHHHHhc-CCcccccchhHHHH
Confidence               3446666677777 88888884444443

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.12  E-value=4.5e-11  Score=121.48  Aligned_cols=88  Identities=15%  Similarity=0.116  Sum_probs=61.7

Q ss_pred             CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHH
Q 045092          159 QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRT  238 (307)
Q Consensus       159 ~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  238 (307)
                      .|+.|||||++.+..++.++|||||||+||||++|..|+....    ..+..     +..     ....+.... .....
T Consensus       177 gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~----~~~~~-----~~~-----~~~~~~~~~-~~~~~  241 (793)
T PLN00181        177 EMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS----RTMSS-----LRH-----RVLPPQILL-NWPKE  241 (793)
T ss_pred             CCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH----HHHHH-----HHH-----hhcChhhhh-cCHHH
Confidence            4888999999999999999999999999999999888763110    00000     100     011111111 12245


Q ss_pred             HHHhccccCCCCCCCCCCHHHHHH
Q 045092          239 SDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ..++..|+ +.+|.+||+|.++++
T Consensus       242 ~~~~~~~L-~~~P~~Rps~~eil~  264 (793)
T PLN00181        242 ASFCLWLL-HPEPSCRPSMSELLQ  264 (793)
T ss_pred             HHHHHHhC-CCChhhCcChHHHhh
Confidence            67788999 999999999999976

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.10  E-value=5.1e-11  Score=110.72  Aligned_cols=74  Identities=19%  Similarity=0.442  Sum_probs=58.1

Q ss_pred             HHHHhcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh-hcHHHHHHHHHHHhhCCCCCccceeeeeecC
Q 045092           83 IKAATNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK-QGNREIVNEIGMISALQHPNLVKLYRLCTET  156 (307)
Q Consensus        83 l~~~t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~  156 (307)
                      +..-.++|..+..+|.||||+|+.+... ++..+|||++..... .......+|+.-+.++.|+++++++..+...
T Consensus        44 ~sr~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~~  119 (516)
T KOG1033|consen   44 TSREANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAWYER  119 (516)
T ss_pred             hhhhhccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhheeceecC
Confidence            4455689999999999999999999854 455899999875433 3345688899999999999999987665543

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=98.91  E-value=1.1e-09  Score=109.40  Aligned_cols=164  Identities=16%  Similarity=0.152  Sum_probs=105.4

Q ss_pred             CcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCC-hhcHHHHHHHHHH--HhhCCCCCccceeeeeecC---------
Q 045092           89 NFASENEISERGFGPVYRGLLADGKVIEVKQLSSKS-KQGNREIVNEIGM--ISALQHPNLVKLYRLCTET---------  156 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~--l~~l~h~niv~l~g~~~~~---------  156 (307)
                      ++...+.||.+.|=+|.+|+.+.|. |+||++-+.+ .-..+.|.+++.-  ..-++|||.+.+.-+-...         
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy  102 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY  102 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence            5666789999999999999987775 8899876554 3345555544433  3344899998874322111         


Q ss_pred             -------------------------------------------C------------------------------------
Q 045092          157 -------------------------------------------L------------------------------------  157 (307)
Q Consensus       157 -------------------------------------------~------------------------------------  157 (307)
                                                                 .                                    
T Consensus       103 vkhnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~f  182 (1431)
T KOG1240|consen  103 VKHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTF  182 (1431)
T ss_pred             HhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCcccceE
Confidence                                                       0                                    


Q ss_pred             -----CCCccccchhhhccC-----------CCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHH-HHHhh
Q 045092          158 -----KQPIVYMAPEYAKHG-----------YLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGS-YLKRA  219 (307)
Q Consensus       158 -----~~t~~y~aPE~~~~~-----------~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~-~~~~~  219 (307)
                           .+-..|+|||-+..+           .++.+-||||.||++.||++ |+++|....      |..+-.. .....
T Consensus       183 FFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQ------L~aYr~~~~~~~e  256 (1431)
T KOG1240|consen  183 FFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQ------LLAYRSGNADDPE  256 (1431)
T ss_pred             EEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHH------HHhHhccCccCHH
Confidence                 004459999965431           26778999999999999999 677774211      1110000 00000


Q ss_pred             hhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          220 RKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       220 ~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      ..+..+-|        ..+.++++.++ +.||.+|-++++.++......
T Consensus       257 ~~Le~Ied--------~~~Rnlil~Mi-~rdPs~RlSAedyL~~yrG~~  296 (1431)
T KOG1240|consen  257 QLLEKIED--------VSLRNLILSMI-QRDPSKRLSAEDYLQKYRGLV  296 (1431)
T ss_pred             HHHHhCcC--------ccHHHHHHHHH-ccCchhccCHHHHHHhhhccc
Confidence            00111112        25677888889 999999999999998866543

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=98.83  E-value=4e-09  Score=99.41  Aligned_cols=104  Identities=19%  Similarity=0.215  Sum_probs=71.4

Q ss_pred             CccccchhhhccC---C----CCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCch
Q 045092          160 PIVYMAPEYAKHG---Y----LTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGF  232 (307)
Q Consensus       160 t~~y~aPE~~~~~---~----~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  232 (307)
                      ...|.|||.+...   .    .+.+.||||||++++|+++.+.||+........  .+.+.. +..+  ......|.+..
T Consensus       114 ~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~--~eii~~-~~~~--~~~~~rP~i~~  188 (484)
T KOG1023|consen  114 ALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDP--DEIILR-VKKG--GSNPFRPSIEL  188 (484)
T ss_pred             HHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCCh--HHHHHH-HHhc--CCCCcCcchhh
Confidence            3458999998763   1    477899999999999999999999754433221  111111 2221  22233333321


Q ss_pred             --hhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          233 --KFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       233 --~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                        +.+..+..++..|| ..+|..||++.+|-..++....
T Consensus       189 ~~e~~~~l~~l~~~cw-~e~P~~rPs~~~i~~~~~~~~~  226 (484)
T KOG1023|consen  189 LNELPPELLLLVARCW-EEIPEKRPSIEQIRSKLLTINK  226 (484)
T ss_pred             hhhcchHHHHHHHHhc-ccChhhCccHHHHHhhhhhhcc
Confidence              34447999999999 9999999999999887776543

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.63  E-value=1.1e-06  Score=77.77  Aligned_cols=166  Identities=23%  Similarity=0.287  Sum_probs=114.2

Q ss_pred             cccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChh---cHHHHHHHHHHHhhCCCC-CccceeeeeecCCC-------
Q 045092           90 FASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQ---GNREIVNEIGMISALQHP-NLVKLYRLCTETLK-------  158 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~l~g~~~~~~~-------  158 (307)
                      |.....||.|+||.||++...  ..+|+|.+......   ....+.+|+.++..+.|+ ||+++++++.....       
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   79 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY   79 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence            566788999999999999965  78999998755332   366899999999999888 79999877643310       


Q ss_pred             -----------------C--------------------------------------------------------------
Q 045092          159 -----------------Q--------------------------------------------------------------  159 (307)
Q Consensus       159 -----------------~--------------------------------------------------------------  159 (307)
                                       .                                                              
T Consensus        80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~  159 (384)
T COG0515          80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTS  159 (384)
T ss_pred             CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccc
Confidence                             0                                                              


Q ss_pred             -----------Cccccchhhhcc---CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhccc
Q 045092          160 -----------PIVYMAPEYAKH---GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGA  225 (307)
Q Consensus       160 -----------t~~y~aPE~~~~---~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  225 (307)
                                 |..|++||.+..   ..+....|+|++|++++++++|..|+......   .........+....  ...
T Consensus       160 ~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~--~~~  234 (384)
T COG0515         160 SIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS---SATSQTLKIILELP--TPS  234 (384)
T ss_pred             cccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc---ccHHHHHHHHHhcC--Ccc
Confidence                       466999999987   67889999999999999999999996433221   00111111111110  000


Q ss_pred             ccCCCchh----hHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          226 SCSKFGFK----FYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       226 ~~~~l~~~----~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ........    ......++...|+ ..+|..|.++.+....
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~~~~~~~~~  275 (384)
T COG0515         235 LASPLSPSNPELISKAASDLLKKLL-AKDPKNRLSSSSDLSH  275 (384)
T ss_pred             cccccCccccchhhHHHHHHHHHHH-hcCchhcCCHHHHhhc
Confidence            11111111    1236778888888 9999999988876543

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.62  E-value=2.4e-08  Score=99.81  Aligned_cols=43  Identities=21%  Similarity=0.220  Sum_probs=39.9

Q ss_pred             CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCc
Q 045092          160 PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTK  202 (307)
Q Consensus       160 t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~  202 (307)
                      |+.|+|||++....|...+|.|++|+++||.+.|..||+...+
T Consensus       221 TPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtp  263 (1205)
T KOG0606|consen  221 TPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP  263 (1205)
T ss_pred             CccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCH
Confidence            9999999999998899999999999999999999999976543

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.55  E-value=1.7e-07  Score=86.31  Aligned_cols=86  Identities=20%  Similarity=0.209  Sum_probs=64.5

Q ss_pred             HHHHHhcCcccCCcccCCCCeeEEEEEEc--CCCEEEEEEccCC-----ChhcHHHHHHHHHHHhhCCCCCccc-eeeee
Q 045092           82 QIKAATNNFASENEISERGFGPVYRGLLA--DGKVIEVKQLSSK-----SKQGNREIVNEIGMISALQHPNLVK-LYRLC  153 (307)
Q Consensus        82 el~~~t~~f~~~~~lG~G~~g~Vy~~~~~--~~~~vAvK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~-l~g~~  153 (307)
                      ......++|...+.||+|+||.||+|...  +++.||||++...     .......|.+|+++|.+++|+|++. ++++ 
T Consensus        12 ~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~-   90 (365)
T PRK09188         12 QIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT-   90 (365)
T ss_pred             ccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc-
Confidence            34445678999999999999999999853  5778899986532     1223456999999999999999985 4432 


Q ss_pred             ecCCCCCccccchhhhccCCC
Q 045092          154 TETLKQPIVYMAPEYAKHGYL  174 (307)
Q Consensus       154 ~~~~~~t~~y~aPE~~~~~~~  174 (307)
                            ...|+..|++.++.+
T Consensus        91 ------~~~~LVmE~~~G~~L  105 (365)
T PRK09188         91 ------GKDGLVRGWTEGVPL  105 (365)
T ss_pred             ------CCcEEEEEccCCCCH
Confidence                  125888888876543

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.54  E-value=1.5e-08  Score=99.23  Aligned_cols=96  Identities=19%  Similarity=0.121  Sum_probs=64.0

Q ss_pred             CccccchhhhccCCCCch-hHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccc-cCCCchhhHHH
Q 045092          160 PIVYMAPEYAKHGYLTDK-AEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGAS-CSKFGFKFYRR  237 (307)
Q Consensus       160 t~~y~aPE~~~~~~~~~~-sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~  237 (307)
                      +-.|+|||.+.+..|+.. .||||.|+++..|++|+.||......+... .+    ...... ..... ...+-...+.+
T Consensus       487 S~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-~~----~~~~~~-~~~~~~~~~~~~~lp~~  560 (601)
T KOG0590|consen  487 SDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-KT----NNYSDQ-RNIFEGPNRLLSLLPRE  560 (601)
T ss_pred             CCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-hh----hccccc-cccccChHHHHHhchhh
Confidence            777999999999988765 999999999999999999996544333221 00    000000 00000 01111223446


Q ss_pred             HHHHhccccCCCCCCCCCCHHHHHH
Q 045092          238 TSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       238 ~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ...++.+.+ +.+|.+|-++.+|++
T Consensus       561 ~~~~~~~~l-~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  561 TRIIIYRML-QLDPTKRITIEQILN  584 (601)
T ss_pred             HHHHHHHHc-cCChhheecHHHHhh
Confidence            777777777 999999999999975

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.51  E-value=4.6e-08  Score=93.00  Aligned_cols=103  Identities=21%  Similarity=0.253  Sum_probs=78.5

Q ss_pred             cccCCCCeeEEEEE----EcCCCEEEEEEccCCChh--cHHHHHHHHHHHhhCC-CCCccceeeeeecCCCC--------
Q 045092           95 EISERGFGPVYRGL----LADGKVIEVKQLSSKSKQ--GNREIVNEIGMISALQ-HPNLVKLYRLCTETLKQ--------  159 (307)
Q Consensus        95 ~lG~G~~g~Vy~~~----~~~~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~--------  159 (307)
                      .+|+|.||.|+++.    .+.|..+|+|.++.....  .......|..++...+ |+.+|++.-.+..+...        
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            47999999999876    235778899888654221  1114566778888885 99999987666544110        


Q ss_pred             ---------------------------------------------------------------------------Ccccc
Q 045092          160 ---------------------------------------------------------------------------PIVYM  164 (307)
Q Consensus       160 ---------------------------------------------------------------------------t~~y~  164 (307)
                                                                                                 |..||
T Consensus        81 gg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~eym  160 (612)
T KOG0603|consen   81 GGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYEYR  160 (612)
T ss_pred             cchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhcccchhhh
Confidence                                                                                       78899


Q ss_pred             chhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcC
Q 045092          165 APEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVIC  199 (307)
Q Consensus       165 aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~  199 (307)
                      |||.+.  .....+|.||||++++||+||..||..
T Consensus       161 ApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~  193 (612)
T KOG0603|consen  161 APEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG  193 (612)
T ss_pred             hhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence            999988  457789999999999999999999964

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.51  E-value=2.7e-07  Score=81.87  Aligned_cols=76  Identities=14%  Similarity=0.063  Sum_probs=47.3

Q ss_pred             CccccchhhhccC--------CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCc
Q 045092          160 PIVYMAPEYAKHG--------YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFG  231 (307)
Q Consensus       160 t~~y~aPE~~~~~--------~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~  231 (307)
                      +..|.+||.....        .++.+.|.|++|+++|.|.+|+.||...........                  +-...
T Consensus       205 ~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~------------------~f~~C  266 (288)
T PF14531_consen  205 PVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW------------------DFSRC  266 (288)
T ss_dssp             -TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG------------------GGTTS
T ss_pred             CcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc------------------cchhc
Confidence            6679999976542        478899999999999999999999975443222110                  01111


Q ss_pred             hhhHHHHHHHhccccCCCCCCCC
Q 045092          232 FKFYRRTSDGNDQCSSSVTPTNR  254 (307)
Q Consensus       232 ~~~~~~~~~l~~~C~~~~dP~~R  254 (307)
                      ...+..+..++...+ +.||.+|
T Consensus       267 ~~~Pe~v~~LI~~lL-~~~~~~R  288 (288)
T PF14531_consen  267 RDMPEPVQFLIRGLL-QRNPEDR  288 (288)
T ss_dssp             S---HHHHHHHHHHT--SSGGGS
T ss_pred             CCcCHHHHHHHHHHc-cCCcccC
Confidence            144557777777777 9999887

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.45  E-value=2.4e-06  Score=77.86  Aligned_cols=169  Identities=15%  Similarity=0.070  Sum_probs=109.4

Q ss_pred             CcccCCcccCCCCeeEEEEEEcC--CCEEEEEEccCCChhcHHHHHHHHHHHhhCCC----CCccceeeeee-cCCC---
Q 045092           89 NFASENEISERGFGPVYRGLLAD--GKVIEVKQLSSKSKQGNREIVNEIGMISALQH----PNLVKLYRLCT-ETLK---  158 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~g~~~-~~~~---  158 (307)
                      +|.+.+.||+|+||.||++....  ...+|+|............+..|+.++..+.+    .++.++++... ....   
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            79999999999999999999543  34788888765433322367778888888762    46666665552 2100   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        99 VM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~  178 (322)
T KOG1164|consen   99 VMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFK  178 (322)
T ss_pred             EEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCcccc
Confidence                                                                                            


Q ss_pred             --------------------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHh
Q 045092          159 --------------------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKR  218 (307)
Q Consensus       159 --------------------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~  218 (307)
                                          +|..|.++....+...+.+-|+||++-++.|++.|..|+........   ......... 
T Consensus       179 ~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~---~~~~~~~~~-  254 (322)
T KOG1164|consen  179 YVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL---KSKFEKDPR-  254 (322)
T ss_pred             ccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch---HHHHHHHhh-
Confidence                                05566666666666778899999999999999999999954332221   110111000 


Q ss_pred             hhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          219 ARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       219 ~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                          ...... +....+..+..+...+- ..+...+|....+...|...
T Consensus       255 ----~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~Pdy~~~~~~l~~~  297 (322)
T KOG1164|consen  255 ----KLLTDR-FGDLKPEEFAKILEYID-SLDYEDKPDYEKLAELLKDV  297 (322)
T ss_pred             ----hhcccc-ccCCChHHHHHHHHHhh-ccCCcCCCCHHHHHHHHHHH
Confidence                111111 22333446666666666 78899999988887776543

>PRK10345 hypothetical protein; Provisional

Probab=98.21  E-value=3.1e-06  Score=72.25  Aligned_cols=65  Identities=14%  Similarity=0.251  Sum_probs=50.9

Q ss_pred             ccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhC-----CCCCccceeeeeecCC
Q 045092           91 ASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISAL-----QHPNLVKLYRLCTETL  157 (307)
Q Consensus        91 ~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~g~~~~~~  157 (307)
                      .....||+|+||.||. .-.++.. +||++........+.+.+|+.++..+     .||||++++|++.++.
T Consensus         5 ~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~   74 (210)
T PRK10345          5 SEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDC   74 (210)
T ss_pred             CCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCC
Confidence            4457899999999996 2224444 69988665444567899999999999     5799999999998764

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.09  E-value=1.7e-05  Score=70.62  Aligned_cols=66  Identities=20%  Similarity=0.341  Sum_probs=47.5

Q ss_pred             CcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCCChhcHHHHHHHHHHHhhC-CCCCccceeeeeecC
Q 045092           89 NFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISAL-QHPNLVKLYRLCTET  156 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~  156 (307)
                      +|.++++||+|.||..+.|. +-+++.||||.-...+.  .-++.-|-...+.| ..++|...|-|..++
T Consensus        29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--APQLrdEYr~YKlL~g~~GIP~vYYFGqeG   96 (449)
T KOG1165|consen   29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--APQLRDEYRTYKLLGGTEGIPQVYYFGQEG   96 (449)
T ss_pred             cceeccccccCcceeeecccccccCceEEEEeccccCC--cchHHHHHHHHHHHcCCCCCCceeeecccc
Confidence            68899999999999999999 55899999997543322  23455666666666 456777766554443

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.01  E-value=9.1e-06  Score=69.40  Aligned_cols=177  Identities=15%  Similarity=0.161  Sum_probs=106.2

Q ss_pred             ccHHHHHHHhcCcccCCcccCCCCeeEEEEE-EcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCC-CCccceeeeeec
Q 045092           78 FHLRQIKAATNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISALQH-PNLVKLYRLCTE  155 (307)
Q Consensus        78 ~~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~g~~~~  155 (307)
                      .++.++. ..+.|.+.++||.|+||.+|.|. +.+|..||||.-+....  ..++..|..+...++| ..|..+.-|..+
T Consensus         6 ~s~~~~i-v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e   82 (341)
T KOG1163|consen    6 GSLEELI-VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTE   82 (341)
T ss_pred             cchhhhe-eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccc
Confidence            3444443 34679999999999999999999 67899999998543322  2356778888777754 344444333322


Q ss_pred             CCCC----------------------------------------------------------------------------
Q 045092          156 TLKQ----------------------------------------------------------------------------  159 (307)
Q Consensus       156 ~~~~----------------------------------------------------------------------------  159 (307)
                      ....                                                                            
T Consensus        83 ~~ynvlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK  162 (341)
T KOG1163|consen   83 KDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK  162 (341)
T ss_pred             cccceeeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchh
Confidence            2100                                                                            


Q ss_pred             ---------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHh
Q 045092          160 ---------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKR  218 (307)
Q Consensus       160 ---------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~  218 (307)
                                           |..|..--...+-.-+..-|+=|+|-+|....-|..||.+........-.+.    +.+
T Consensus       163 ky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEk----I~E  238 (341)
T KOG1163|consen  163 KYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEK----ISE  238 (341)
T ss_pred             hhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHH----HHH
Confidence                                 4444332222222334567999999999999999999976543332211111    111


Q ss_pred             hhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCH---HHHHHHh
Q 045092          219 ARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLM---SFVVSML  264 (307)
Q Consensus       219 ~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~---~~vl~~L  264 (307)
                      .+  .......+...++.++...+..|- ..--++-|.-   .++...|
T Consensus       239 kK--~s~~ie~LC~G~P~EF~myl~Y~R-~L~F~E~Pdy~ylrqlFriL  284 (341)
T KOG1163|consen  239 KK--MSTPIEVLCKGFPAEFAMYLNYCR-GLGFEEKPDYMYLRQLFRIL  284 (341)
T ss_pred             hh--cCCCHHHHhCCCcHHHHHHHHHHh-hcCCCCCCcHHHHHHHHHHH
Confidence            11  111122334456667777788888 7777777764   3444444

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=97.99  E-value=8e-06  Score=70.43  Aligned_cols=94  Identities=17%  Similarity=0.056  Sum_probs=70.2

Q ss_pred             HHHH--HHHhcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHH---H------HHHHHHHHhhCCCCCccc
Q 045092           80 LRQI--KAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNR---E------IVNEIGMISALQHPNLVK  148 (307)
Q Consensus        80 ~~el--~~~t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~---~------~~~E~~~l~~l~h~niv~  148 (307)
                      |.++  ....++|...+.||.|+||.||+... ++..+|||.+.........   .      +.+|++.+.++.|++|..
T Consensus        21 ~~~~~~~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~   99 (232)
T PRK10359         21 YKEIFDDFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLAS   99 (232)
T ss_pred             HHHHHHHHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCc
Confidence            4444  33457899999999999999999765 5678999999754332222   2      689999999999999999


Q ss_pred             eeeeeecCCCC-----CccccchhhhccCCC
Q 045092          149 LYRLCTETLKQ-----PIVYMAPEYAKHGYL  174 (307)
Q Consensus       149 l~g~~~~~~~~-----t~~y~aPE~~~~~~~  174 (307)
                      ...++......     ...|+..|++.+..+
T Consensus       100 ~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL  130 (232)
T PRK10359        100 LNDFYLLAERKTLRYAHTYIMLIEYIEGVEL  130 (232)
T ss_pred             ceEeeeecccccccccCCeEEEEEEECCccH
Confidence            99887654322     346788888876544

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=97.96  E-value=1.1e-05  Score=73.46  Aligned_cols=88  Identities=16%  Similarity=0.073  Sum_probs=61.9

Q ss_pred             cccchhhhcc--CC----CCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhH
Q 045092          162 VYMAPEYAKH--GY----LTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFY  235 (307)
Q Consensus       162 ~y~aPE~~~~--~~----~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  235 (307)
                      .-||||....  |.    -..|+|.|+.|.+.||+++...||..... .......           ..+.--|.++..++
T Consensus       416 ~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGe-m~L~~r~-----------Yqe~qLPalp~~vp  483 (598)
T KOG4158|consen  416 KLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGE-MLLDTRT-----------YQESQLPALPSRVP  483 (598)
T ss_pred             eecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccch-heechhh-----------hhhhhCCCCcccCC
Confidence            4699997653  32    23689999999999999999999975221 1111111           33444567777788


Q ss_pred             HHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          236 RRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       236 ~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ..+.+++..-+ +.||++|++..-..+
T Consensus       484 p~~rqlV~~lL-~r~pskRvsp~iAAN  509 (598)
T KOG4158|consen  484 PVARQLVFDLL-KRDPSKRVSPNIAAN  509 (598)
T ss_pred             hHHHHHHHHHh-cCCccccCCccHHHh
Confidence            88888888888 999999998654333

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=97.91  E-value=1.4e-05  Score=67.24  Aligned_cols=75  Identities=13%  Similarity=0.071  Sum_probs=51.4

Q ss_pred             CCcccCCCCeeEEEEEEcCCCEEEEEEccCCChh--c-------HHH-----------------HHHHHHHHhhCCCCCc
Q 045092           93 ENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQ--G-------NRE-----------------IVNEIGMISALQHPNL  146 (307)
Q Consensus        93 ~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~--~-------~~~-----------------~~~E~~~l~~l~h~ni  146 (307)
                      ...||+|+||.||+|...+|+.||||+++.....  .       ...                 ..+|++++.++.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            4689999999999999778999999998653211  1       112                 2349999999987776


Q ss_pred             cceeeeeecCCCCCccccchhhhccC
Q 045092          147 VKLYRLCTETLKQPIVYMAPEYAKHG  172 (307)
Q Consensus       147 v~l~g~~~~~~~~t~~y~aPE~~~~~  172 (307)
                      .....+..     ...|+..|++.++
T Consensus        82 ~~p~~~~~-----~~~~iVmE~i~g~  102 (190)
T cd05147          82 PCPEPILL-----KSHVLVMEFIGDD  102 (190)
T ss_pred             CCCcEEEe-----cCCEEEEEEeCCC
Confidence            43322211     1247888888664

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=97.76  E-value=6.4e-05  Score=63.05  Aligned_cols=75  Identities=15%  Similarity=0.091  Sum_probs=53.5

Q ss_pred             CCcccCCCCeeEEEEEEcCCCEEEEEEccCCChh--c------------------------HHHHHHHHHHHhhCCCCCc
Q 045092           93 ENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQ--G------------------------NREIVNEIGMISALQHPNL  146 (307)
Q Consensus        93 ~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~--~------------------------~~~~~~E~~~l~~l~h~ni  146 (307)
                      ...||+|+||.||+|...+|+.||||.++.....  .                        ...+..|...+.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999768999999998754211  0                        1124578999999999887


Q ss_pred             cceeeeeecCCCCCccccchhhhccC
Q 045092          147 VKLYRLCTETLKQPIVYMAPEYAKHG  172 (307)
Q Consensus       147 v~l~g~~~~~~~~t~~y~aPE~~~~~  172 (307)
                      .....+...     ..|+..|++.++
T Consensus        82 ~~p~~~~~~-----~~~lVmE~~~g~  102 (190)
T cd05145          82 PVPEPILLK-----KNVLVMEFIGDD  102 (190)
T ss_pred             CCceEEEec-----CCEEEEEEecCC
Confidence            543333221     247888888655

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK14879 serine/threonine protein kinase; Provisional

Probab=97.46  E-value=0.00027  Score=59.88  Aligned_cols=77  Identities=14%  Similarity=0.070  Sum_probs=55.5

Q ss_pred             CcccCCCCeeEEEEEEcCCCEEEEEEccCCChh--------cHHHHHHHHHHHhhCCCCCccceeeeeecCCCCCccccc
Q 045092           94 NEISERGFGPVYRGLLADGKVIEVKQLSSKSKQ--------GNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMA  165 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~t~~y~a  165 (307)
                      +.||+|++|.||+|.. ++..|++|........        ....+.+|+.++..+.|+||.....++....   ..|+.
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~---~~~lv   77 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPE---NFIIV   77 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCC---CCEEE
Confidence            5799999999999987 5778999976533211        1245788999999999998877666655432   35666


Q ss_pred             hhhhccCCC
Q 045092          166 PEYAKHGYL  174 (307)
Q Consensus       166 PE~~~~~~~  174 (307)
                      -|++.++.+
T Consensus        78 ~e~~~G~~L   86 (211)
T PRK14879         78 MEYIEGEPL   86 (211)
T ss_pred             EEEeCCcCH
Confidence            777765543

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=97.27  E-value=0.00053  Score=57.53  Aligned_cols=76  Identities=17%  Similarity=0.085  Sum_probs=51.7

Q ss_pred             cccCCCCeeEEEEEEcCCCEEEEEEccCCCh--------hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCCCccccch
Q 045092           95 EISERGFGPVYRGLLADGKVIEVKQLSSKSK--------QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAP  166 (307)
Q Consensus        95 ~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~t~~y~aP  166 (307)
                      .||+|+||.||+|.+ ++..|++|.......        .....+.+|++++..++|+++.....++....   ..|+.-
T Consensus         1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~---~~~lv~   76 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPD---NKTIVM   76 (199)
T ss_pred             CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC---CCEEEE
Confidence            489999999999995 578899998643211        11356788999999998876544443333322   246777


Q ss_pred             hhhccCCC
Q 045092          167 EYAKHGYL  174 (307)
Q Consensus       167 E~~~~~~~  174 (307)
                      |++.++.+
T Consensus        77 e~~~g~~l   84 (199)
T TIGR03724        77 EYIEGKPL   84 (199)
T ss_pred             EEECCccH
Confidence            87766543

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=97.24  E-value=0.00062  Score=66.44  Aligned_cols=89  Identities=9%  Similarity=0.030  Sum_probs=60.3

Q ss_pred             HHHHhcCcccCCcccCCCCeeEEEEEEcCCCEEEEEE-ccCC-Ch------hcHHHHHHHHHHHhhCCCCCccceeeeee
Q 045092           83 IKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQ-LSSK-SK------QGNREIVNEIGMISALQHPNLVKLYRLCT  154 (307)
Q Consensus        83 l~~~t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~-~~~~-~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~  154 (307)
                      .......|...+.||+|+||.||+|.+... .+++|+ +... ..      ...+.+.+|++++.+++|+|++....++.
T Consensus       328 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~  406 (535)
T PRK09605        328 EEEVKRRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDV  406 (535)
T ss_pred             ccccccccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEE
Confidence            333445566789999999999999987543 344443 2211 11      12346889999999999999988777766


Q ss_pred             cCCCCCccccchhhhccCCCC
Q 045092          155 ETLKQPIVYMAPEYAKHGYLT  175 (307)
Q Consensus       155 ~~~~~t~~y~aPE~~~~~~~~  175 (307)
                      ...   ..|+.-|++.++.+.
T Consensus       407 ~~~---~~~lv~E~~~g~~L~  424 (535)
T PRK09605        407 DPE---EKTIVMEYIGGKDLK  424 (535)
T ss_pred             eCC---CCEEEEEecCCCcHH
Confidence            533   357777888776543

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=97.22  E-value=0.00093  Score=56.25  Aligned_cols=85  Identities=16%  Similarity=0.053  Sum_probs=57.1

Q ss_pred             HHHHHhcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChh----------------------cHHHHHHHHHHHh
Q 045092           82 QIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQ----------------------GNREIVNEIGMIS  139 (307)
Q Consensus        82 el~~~t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~----------------------~~~~~~~E~~~l~  139 (307)
                      ++...-..|...+.||+|+||.||++...+|+.||||++......                      ....+..|+.++.
T Consensus         9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   88 (198)
T cd05144           9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK   88 (198)
T ss_pred             HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence            444333347778999999999999999878999999986532200                      0123677888999


Q ss_pred             hCCCC--CccceeeeeecCCCCCccccchhhhccCC
Q 045092          140 ALQHP--NLVKLYRLCTETLKQPIVYMAPEYAKHGY  173 (307)
Q Consensus       140 ~l~h~--niv~l~g~~~~~~~~t~~y~aPE~~~~~~  173 (307)
                      .+.|.  .+.+.++.+       ..|+.-|++.++.
T Consensus        89 ~l~~~~i~v~~~~~~~-------~~~lv~e~~~g~~  117 (198)
T cd05144          89 ALYEEGFPVPKPIDWN-------RHAVVMEYIDGVE  117 (198)
T ss_pred             HHHHcCCCCCceeecC-------CceEEEEEeCCcc
Confidence            88777  444444321       2367777766644

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.15  E-value=0.00024  Score=63.45  Aligned_cols=87  Identities=15%  Similarity=0.117  Sum_probs=53.0

Q ss_pred             CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHH
Q 045092          160 PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTS  239 (307)
Q Consensus       160 t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  239 (307)
                      -++|.+||+-.....+..+|||+||+..+||..+..--..  ... ....+..         +...+-    ......-.
T Consensus       245 ~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tn--seS-~~~~ee~---------ia~~i~----~len~lqr  308 (458)
T KOG1266|consen  245 LPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTN--SES-KVEVEEN---------IANVII----GLENGLQR  308 (458)
T ss_pred             CCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCC--Ccc-eeehhhh---------hhhhee----eccCcccc
Confidence            5678888877666778899999999999999987653211  001 0000000         000000    00001223


Q ss_pred             HHhccccCCCCCCCCCCHHHHHHH
Q 045092          240 DGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       240 ~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .++..|+ +..|..||+|.+++..
T Consensus       309 ~~i~kcl-~~eP~~rp~ar~llfH  331 (458)
T KOG1266|consen  309 GSITKCL-EGEPNGRPDARLLLFH  331 (458)
T ss_pred             CcCcccc-cCCCCCCcchhhhhcC
Confidence            4567899 9999999999987654

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.12  E-value=0.00042  Score=70.70  Aligned_cols=36  Identities=8%  Similarity=-0.000  Sum_probs=33.0

Q ss_pred             CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCC
Q 045092          160 PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRS  195 (307)
Q Consensus       160 t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~  195 (307)
                      |-++-.+|...+...+..+|-|.+..+++-|+.|+.
T Consensus       866 td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  866 TDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             cccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence            777888999999999999999999999999999864

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=97.06  E-value=0.0034  Score=49.22  Aligned_cols=78  Identities=17%  Similarity=0.094  Sum_probs=59.8

Q ss_pred             cCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCC--CCccceeeeeecCCCCCccccchhhh
Q 045092           92 SENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQH--PNLVKLYRLCTETLKQPIVYMAPEYA  169 (307)
Q Consensus        92 ~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~g~~~~~~~~t~~y~aPE~~  169 (307)
                      +.+.||+|.++.||++...+ ..+++|.......  ...+.+|+..+..++|  .++++++++....   ...|+.-|++
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~---~~~~~v~e~~   75 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESD---GWSYLLMEWI   75 (155)
T ss_pred             cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCC---CccEEEEEec
Confidence            34779999999999999754 7899999865433  4678999999999976  5888988877654   3467777887


Q ss_pred             ccCCCC
Q 045092          170 KHGYLT  175 (307)
Q Consensus       170 ~~~~~~  175 (307)
                      .++...
T Consensus        76 ~g~~~~   81 (155)
T cd05120          76 EGETLD   81 (155)
T ss_pred             CCeecc
Confidence            765443

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>smart00090 RIO RIO-like kinase

Probab=96.97  E-value=0.0013  Score=57.26  Aligned_cols=78  Identities=18%  Similarity=0.017  Sum_probs=54.1

Q ss_pred             CcccCCcccCCCCeeEEEEE--EcCCCEEEEEEccCCChh------------------------cHHHHHHHHHHHhhCC
Q 045092           89 NFASENEISERGFGPVYRGL--LADGKVIEVKQLSSKSKQ------------------------GNREIVNEIGMISALQ  142 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~--~~~~~~vAvK~~~~~~~~------------------------~~~~~~~E~~~l~~l~  142 (307)
                      .|.+.+.||+|+||.||+|.  ..+|+.||||.+......                        ....+..|+.++.++.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            47888999999999999998  568999999998643210                        0123568999999996


Q ss_pred             CC--CccceeeeeecCCCCCccccchhhhccCC
Q 045092          143 HP--NLVKLYRLCTETLKQPIVYMAPEYAKHGY  173 (307)
Q Consensus       143 h~--niv~l~g~~~~~~~~t~~y~aPE~~~~~~  173 (307)
                      +.  .+.+++++.       ..|+.-|++.++.
T Consensus       109 ~~~i~~p~~~~~~-------~~~lV~E~~~g~~  134 (237)
T smart00090      109 EAGVPVPKPIAWR-------RNVLVMEFIGGDG  134 (237)
T ss_pred             hcCCCCCeeeEec-------CceEEEEEecCCc
Confidence            53  334444431       2367777776643

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=96.93  E-value=0.0002  Score=70.53  Aligned_cols=164  Identities=17%  Similarity=0.170  Sum_probs=105.5

Q ss_pred             cCcccCCcccCCCCeeEEEEEE--cCCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCC-CCCccceeeeeecCCC----
Q 045092           88 NNFASENEISERGFGPVYRGLL--ADGKVIEVKQLSSKS--KQGNREIVNEIGMISALQ-HPNLVKLYRLCTETLK----  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~--~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~----  158 (307)
                      ..|...+.||+|+|+.|-....  .....+|+|.+....  .........|..+-..+. |.|++.+++.......    
T Consensus        20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~   99 (601)
T KOG0590|consen   20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS   99 (601)
T ss_pred             ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence            3455567799999999988874  234567777765432  222334455777777775 9999998875443210    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       100 ~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~  179 (601)
T KOG0590|consen  100 LSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKN  179 (601)
T ss_pred             cCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccccC
Confidence                                                                                            


Q ss_pred             ----------C-Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccc
Q 045092          159 ----------Q-PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGAS  226 (307)
Q Consensus       159 ----------~-t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  226 (307)
                                + ++.|+|||...+ +......|+||.|+++.-+++|..|++....... ....|...        ....
T Consensus       180 g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~-~~~~~~~~--------~~~~  250 (601)
T KOG0590|consen  180 GAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG-RYSSWKSN--------KGRF  250 (601)
T ss_pred             CcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc-cceeeccc--------cccc
Confidence                      0 677999998877 4556779999999999999999999975443331 11111111        0000


Q ss_pred             cCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHH
Q 045092          227 CSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVV  261 (307)
Q Consensus       227 ~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl  261 (307)
                      ....-........++...++ ..+|..|.+.+++.
T Consensus       251 ~~~~~~~~~~~~~~~l~k~l-~~~~~~r~s~~~~~  284 (601)
T KOG0590|consen  251 TQLPWNSISDQAHDLLHKIL-KENPSNRLSIEELK  284 (601)
T ss_pred             ccCccccCChhhhhcccccc-cCCchhcccccccc
Confidence            11111223335667777777 78899999877654

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=96.87  E-value=0.0015  Score=62.34  Aligned_cols=65  Identities=14%  Similarity=0.140  Sum_probs=44.0

Q ss_pred             CcccCCcccC--CCCeeEEEEEE---cCCCEEEEEEccC--CChhcHHHHHHHHHHHhhC-CCCCccceeeee
Q 045092           89 NFASENEISE--RGFGPVYRGLL---ADGKVIEVKQLSS--KSKQGNREIVNEIGMISAL-QHPNLVKLYRLC  153 (307)
Q Consensus        89 ~f~~~~~lG~--G~~g~Vy~~~~---~~~~~vAvK~~~~--~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~  153 (307)
                      .|.....+|.  |.+|.||.+..   .++..+|+|.-+.  ........=.+|+....++ .|.|.++.+...
T Consensus       115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~  187 (524)
T KOG0601|consen  115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAW  187 (524)
T ss_pred             hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccc
Confidence            4566688999  99999999885   3678899998442  2223333445566666666 588888855433

>cd05119 RIO RIO kinase family, catalytic domain

Probab=96.76  E-value=0.0019  Score=53.48  Aligned_cols=31  Identities=26%  Similarity=0.280  Sum_probs=27.1

Q ss_pred             CCcccCCCCeeEEEEEEcCCCEEEEEEccCC
Q 045092           93 ENEISERGFGPVYRGLLADGKVIEVKQLSSK  123 (307)
Q Consensus        93 ~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~  123 (307)
                      .+.||+|+||.||+|...+++.||||++...
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~   32 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTG   32 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecC
Confidence            4689999999999999778999999988643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=96.46  E-value=0.0067  Score=57.70  Aligned_cols=34  Identities=32%  Similarity=0.481  Sum_probs=29.0

Q ss_pred             CcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCC
Q 045092           89 NFASENEISERGFGPVYRGLLADGKVIEVKQLSSK  123 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~  123 (307)
                      .|+ .+.||.|++|.||+|++.+|+.||||+.+..
T Consensus       119 ~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~  152 (437)
T TIGR01982       119 EFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPG  152 (437)
T ss_pred             hCC-CcceeeeehhheEEEEecCCCEEEEEeeCCC
Confidence            344 3679999999999999989999999998654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.34  E-value=0.00049  Score=63.71  Aligned_cols=43  Identities=33%  Similarity=0.585  Sum_probs=38.8

Q ss_pred             HHhcccccccccCeeeeeeeccCCceeecCcccceEEeccccc
Q 045092          262 SMLEDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWVTL  304 (307)
Q Consensus       262 ~~L~~~~~v~~~g~~~~e~~t~~~~~~~~~~~~~~~~~~~~~~  304 (307)
                      ..++.++|||+||++++|++||+++++..++.++..|..|+..
T Consensus       253 g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~  295 (361)
T KOG1187|consen  253 GKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKP  295 (361)
T ss_pred             CCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHH
Confidence            3688999999999999999999999999888889889999743

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=96.25  E-value=0.0096  Score=57.85  Aligned_cols=36  Identities=22%  Similarity=0.331  Sum_probs=30.5

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcC-CCEEEEEEccCC
Q 045092           87 TNNFASENEISERGFGPVYRGLLAD-GKVIEVKQLSSK  123 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~-~~~vAvK~~~~~  123 (307)
                      ..+|+. +.||.|++|+||+|.+.+ |+.||||+++..
T Consensus       119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~  155 (537)
T PRK04750        119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPD  155 (537)
T ss_pred             HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcc
Confidence            345775 789999999999999876 999999998754

>PRK12274 serine/threonine protein kinase; Provisional

Probab=96.09  E-value=0.015  Score=49.49  Aligned_cols=75  Identities=13%  Similarity=0.049  Sum_probs=53.7

Q ss_pred             ccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCCh----hcHHHHHHHHHHHhhC-CCCCccceeeeeecCCCCCccccc
Q 045092           91 ASENEISERGFGPVYRGLLADGKVIEVKQLSSKSK----QGNREIVNEIGMISAL-QHPNLVKLYRLCTETLKQPIVYMA  165 (307)
Q Consensus        91 ~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~t~~y~a  165 (307)
                      .....|++|+||+||.+.. .+..++.+.+.....    .....|.+|+++|.++ +|+++++++++..       .|+.
T Consensus         5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~~-------~~lv   76 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWDG-------RHLD   76 (218)
T ss_pred             ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEcC-------EEEE
Confidence            4467899999999997765 577888777754322    1122588999999999 4588999988621       3666


Q ss_pred             hhhhccCC
Q 045092          166 PEYAKHGY  173 (307)
Q Consensus       166 PE~~~~~~  173 (307)
                      .|++.+..
T Consensus        77 meyI~G~~   84 (218)
T PRK12274         77 RSYLAGAA   84 (218)
T ss_pred             EeeecCcc
Confidence            67766543

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=95.62  E-value=0.055  Score=45.69  Aligned_cols=81  Identities=14%  Similarity=0.179  Sum_probs=57.6

Q ss_pred             CcccCCCCeeEEEEEEcCCCEEEEEEccCCCh-hcHHHHHHHHHHHhhCCC--CCccceeeeeecCCCCCccccchhhhc
Q 045092           94 NEISERGFGPVYRGLLADGKVIEVKQLSSKSK-QGNREIVNEIGMISALQH--PNLVKLYRLCTETLKQPIVYMAPEYAK  170 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h--~niv~l~g~~~~~~~~t~~y~aPE~~~  170 (307)
                      +.|+.|.++.||++...+|..+++|....... .....+.+|++++..+.+  .++.+++.+..........|+.-|++.
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            56899999999999976668899998754322 134578999999999965  456778877665331123467778776


Q ss_pred             cCCC
Q 045092          171 HGYL  174 (307)
Q Consensus       171 ~~~~  174 (307)
                      +...
T Consensus        84 G~~l   87 (223)
T cd05154          84 GRVL   87 (223)
T ss_pred             CEec
Confidence            5544

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=95.35  E-value=0.025  Score=54.25  Aligned_cols=74  Identities=16%  Similarity=0.172  Sum_probs=48.5

Q ss_pred             cccHHH-HHHHhcCcccCCcccCCCCeeEEEEEEc--CCCEEEEEEccCCChhcHHH--HHHHHHHHhhC-CCCCcccee
Q 045092           77 SFHLRQ-IKAATNNFASENEISERGFGPVYRGLLA--DGKVIEVKQLSSKSKQGNRE--IVNEIGMISAL-QHPNLVKLY  150 (307)
Q Consensus        77 ~~~~~e-l~~~t~~f~~~~~lG~G~~g~Vy~~~~~--~~~~vAvK~~~~~~~~~~~~--~~~E~~~l~~l-~h~niv~l~  150 (307)
                      +|.-.+ ....+.+|.....||.|.|+.|++...+  ++..+++|.+.........+  -..|+.+...+ .|.+++.++
T Consensus       253 i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~  332 (524)
T KOG0601|consen  253 IFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKN  332 (524)
T ss_pred             eecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCC
Confidence            344444 4455678999999999999999998843  67889999887553332221  23455555444 466666644

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=95.02  E-value=0.06  Score=52.68  Aligned_cols=48  Identities=19%  Similarity=0.261  Sum_probs=36.3

Q ss_pred             EcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecC
Q 045092          109 LADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTET  156 (307)
Q Consensus       109 ~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~  156 (307)
                      ..++.+|.|...+...........+-++-|+.++||||++++......
T Consensus        34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~   81 (690)
T KOG1243|consen   34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEE   81 (690)
T ss_pred             eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhccc
Confidence            347888888888766553345567778899999999999998766544

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=94.84  E-value=0.019  Score=44.26  Aligned_cols=49  Identities=18%  Similarity=0.350  Sum_probs=36.4

Q ss_pred             cCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhh
Q 045092           88 NNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISA  140 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~  140 (307)
                      ..|+ .+-||.|+.|.||+|++.+|+.||||..+..-.   +.+...+.+|..
T Consensus        12 ~~fd-~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i~---~~i~~Dl~~l~~   60 (119)
T PF03109_consen   12 DEFD-PEPLASASIAQVHRARLKDGEEVAVKVQRPGIE---EQIEADLRILRR   60 (119)
T ss_pred             HHCC-cchhhheehhhheeeeecccchhhhhhcchHHH---HHHHHHHHHHHH
Confidence            4455 478999999999999998999999999865533   344555555543

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=94.09  E-value=0.14  Score=42.30  Aligned_cols=72  Identities=21%  Similarity=0.317  Sum_probs=51.1

Q ss_pred             CCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCcc-ceeeeeecCCCCCccccchhhhcc
Q 045092           93 ENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLV-KLYRLCTETLKQPIVYMAPEYAKH  171 (307)
Q Consensus        93 ~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~g~~~~~~~~t~~y~aPE~~~~  171 (307)
                      ...|++|.+|.||+|.+. |..+|+|.-...+  ....+..|+++|..+.-.++. ++|.|..+       +++.|++.+
T Consensus        27 ~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~ds--~r~~l~kEakiLeil~g~~~~p~vy~yg~~-------~i~me~i~G   96 (201)
T COG2112          27 EKELAKGTTSVVYLGEWR-GGEVALKVRRRDS--PRRNLEKEAKILEILAGEGVTPEVYFYGED-------FIRMEYIDG   96 (201)
T ss_pred             hhhhhcccccEEEEeecc-CceEEEEEecCCc--chhhHHHHHHHHHHhhhcCCCceEEEechh-------hhhhhhhcC
Confidence            478999999999999985 5688999865443  346788999999988755553 45555443       344577765


Q ss_pred             CCC
Q 045092          172 GYL  174 (307)
Q Consensus       172 ~~~  174 (307)
                      ..+
T Consensus        97 ~~L   99 (201)
T COG2112          97 RPL   99 (201)
T ss_pred             cch
Confidence            443

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=93.42  E-value=0.06  Score=55.27  Aligned_cols=41  Identities=22%  Similarity=0.216  Sum_probs=38.1

Q ss_pred             CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCC
Q 045092          160 PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICR  200 (307)
Q Consensus       160 t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~  200 (307)
                      |+.|++||...+......+|.|++|++++|.++|..||...
T Consensus       998 t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen  998 TPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred             CCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCc
Confidence            89999999999988899999999999999999999999643

>cd05151 ChoK Choline Kinase (ChoK)

Probab=93.12  E-value=0.41  Score=38.53  Aligned_cols=91  Identities=13%  Similarity=0.055  Sum_probs=58.4

Q ss_pred             CcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCc-cceeeeeecCCCCCccccchhhhccC
Q 045092           94 NEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNL-VKLYRLCTETLKQPIVYMAPEYAKHG  172 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~g~~~~~~~~t~~y~aPE~~~~~  172 (307)
                      +.|+.|.++.||++... +..|++|....... ....+.+|+.++..+.+.++ .+++.+..     +..|+.-|++.+.
T Consensus         4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~-----~~~~lv~e~i~G~   76 (170)
T cd05151           4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP-----ETGVLITEFIEGS   76 (170)
T ss_pred             eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC-----CCCeEEEEecCCC
Confidence            56899999999999864 77899998754422 12356789999998865444 45555432     2356777888776


Q ss_pred             CCCc-----hhHHHHHHHHHHHHH
Q 045092          173 YLTD-----KAEVCSFGIVTLEIE  191 (307)
Q Consensus       173 ~~~~-----~sDV~s~Gvvl~ell  191 (307)
                      .+..     ....-.+|-.+..|-
T Consensus        77 ~l~~~~~~~~~~~~~l~~~l~~LH  100 (170)
T cd05151          77 ELLTEDFSDPENLEKIAKLLKKLH  100 (170)
T ss_pred             ccccccccCHHHHHHHHHHHHHHh
Confidence            5542     233334444444443

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=93.10  E-value=0.62  Score=43.79  Aligned_cols=41  Identities=12%  Similarity=0.113  Sum_probs=32.5

Q ss_pred             CccccchhhhccC-----CCCchhHHHHHHHHHHHHHhC-CCCCcCC
Q 045092          160 PIVYMAPEYAKHG-----YLTDKAEVCSFGIVTLEIESG-RSNVICR  200 (307)
Q Consensus       160 t~~y~aPE~~~~~-----~~~~~sDV~s~Gvvl~elltg-~~p~~~~  200 (307)
                      ...|.+||.-.-+     .-+...|-|.+||++++++.| +.||.+.
T Consensus       179 ~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI  225 (637)
T COG4248         179 VSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGI  225 (637)
T ss_pred             ccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcc
Confidence            5669999975522     346779999999999999986 9999653

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=92.73  E-value=0.23  Score=42.05  Aligned_cols=66  Identities=15%  Similarity=0.171  Sum_probs=49.2

Q ss_pred             cCcccCCcccCCCC-eeEEEEEEcCCCEEEEEEccC---CCh------------------hcHHHHHHHHHHHhhCC---
Q 045092           88 NNFASENEISERGF-GPVYRGLLADGKVIEVKQLSS---KSK------------------QGNREIVNEIGMISALQ---  142 (307)
Q Consensus        88 ~~f~~~~~lG~G~~-g~Vy~~~~~~~~~vAvK~~~~---~~~------------------~~~~~~~~E~~~l~~l~---  142 (307)
                      .+++..+.||.|.- |.|++.++ +|+.+|+|....   ...                  .....|..|.+...+|+   
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~  115 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG  115 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence            78888999999999 99999998 478999999321   000                  11235888998888874   


Q ss_pred             CCCc--cceeeeee
Q 045092          143 HPNL--VKLYRLCT  154 (307)
Q Consensus       143 h~ni--v~l~g~~~  154 (307)
                      +.++  |+++||..
T Consensus       116 ~e~~~Avkc~Gyl~  129 (207)
T PF13095_consen  116 REGLWAVKCHGYLL  129 (207)
T ss_pred             ccCceEEEeeEEEE
Confidence            4455  88898864

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=92.63  E-value=0.02  Score=56.15  Aligned_cols=92  Identities=18%  Similarity=0.248  Sum_probs=55.7

Q ss_pred             CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHH
Q 045092          160 PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTS  239 (307)
Q Consensus       160 t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  239 (307)
                      ..-|.|||++.+...+.++|+||+||+++-+..|..+..........+-.    ...     ..+.-........+.++.
T Consensus       172 ~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~----~~~-----~~~~~~~~~s~~~p~el~  242 (700)
T KOG2137|consen  172 HLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSF----SRN-----LLNAGAFGYSNNLPSELR  242 (700)
T ss_pred             CcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhhh----hhc-----ccccccccccccCcHHHH
Confidence            56799999999988899999999999999999655554322211110000    000     011111111133444666


Q ss_pred             HHhccccCCCCCCCCCCHHHHH
Q 045092          240 DGNDQCSSSVTPTNRPLMSFVV  261 (307)
Q Consensus       240 ~l~~~C~~~~dP~~RPs~~~vl  261 (307)
                      +-+.+.+ ..++.-||++.++.
T Consensus       243 ~~l~k~l-~~~~~~rp~~~~l~  263 (700)
T KOG2137|consen  243 ESLKKLL-NGDSAVRPTLDLLL  263 (700)
T ss_pred             HHHHHHh-cCCcccCcchhhhh
Confidence            6666667 88999999766553

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=92.16  E-value=0.35  Score=42.05  Aligned_cols=62  Identities=10%  Similarity=0.103  Sum_probs=44.9

Q ss_pred             CCccc-CCCCeeEEEEEEcCCCEEEEEEccCCC-------------hhcHHHHHHHHHHHhhCCCCCc--cceeeeeec
Q 045092           93 ENEIS-ERGFGPVYRGLLADGKVIEVKQLSSKS-------------KQGNREIVNEIGMISALQHPNL--VKLYRLCTE  155 (307)
Q Consensus        93 ~~~lG-~G~~g~Vy~~~~~~~~~vAvK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~l~g~~~~  155 (307)
                      ...|| .||.|+||+.... +..++||.+....             ......+.+|+.++.++.|++|  ++.+++...
T Consensus        36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~  113 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV  113 (239)
T ss_pred             CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence            35688 8999999998874 6788999875321             1123467889999999988775  677776543

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=89.27  E-value=0.062  Score=52.59  Aligned_cols=39  Identities=13%  Similarity=0.193  Sum_probs=33.9

Q ss_pred             CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCc
Q 045092          160 PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVI  198 (307)
Q Consensus       160 t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~  198 (307)
                      |+.++|||....+.+..+.|+|+.|+--.++.-|-+|-.
T Consensus       393 ~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~  431 (829)
T KOG0576|consen  393 TPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS  431 (829)
T ss_pred             CCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence            777999999999999999999999988778887776653

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=89.23  E-value=0.49  Score=45.61  Aligned_cols=123  Identities=20%  Similarity=0.214  Sum_probs=66.5

Q ss_pred             HHHHHHHHHHhhCCCCCccceeeeeecCCCC----------------------CccccchhhhccC--------------
Q 045092          129 REIVNEIGMISALQHPNLVKLYRLCTETLKQ----------------------PIVYMAPEYAKHG--------------  172 (307)
Q Consensus       129 ~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----------------------t~~y~aPE~~~~~--------------  172 (307)
                      ..++...+.++.+.|+|+...+.+.......                      -..+.|+++...+              
T Consensus        27 ~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~~Sled~~~~~~l~~~s~~~~~~~~~~~~~~td~~~t~~~~  106 (725)
T KOG1093|consen   27 IQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHYTMSLEDILKTGNLKDESLLAHGVLHLNIIYITDHFLTKYPS  106 (725)
T ss_pred             HHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhhccchHHHHHhcccchhhhcccccceehhhhccccccccCCC
Confidence            4556667788888899988887665443221                      1123344432211              


Q ss_pred             CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhh---hhcc-cccCCCchhhHHHHHHHhccccCC
Q 045092          173 YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRAR---KLNG-ASCSKFGFKFYRRTSDGNDQCSSS  248 (307)
Q Consensus       173 ~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~---~~~~-~~~~~l~~~~~~~~~~l~~~C~~~  248 (307)
                      ....|+|||++|.++.|+.-|..-+.      .....+.+....+-..   .... .....+...++.....+...|. -
T Consensus       107 ~~~pKsdVwsl~~i~~el~L~~~l~~------~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~-~  179 (725)
T KOG1093|consen  107 PIGPKSDVWSLGFIILELYLGISLEA------ELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCL-W  179 (725)
T ss_pred             CCCcchhhhhHHHHHHHHHHhhHHHH------HHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCC-c
Confidence            12358999999999999999865431      1111111111111100   0000 0000112234457788888999 8


Q ss_pred             CCCCCCCCHH
Q 045092          249 VTPTNRPLMS  258 (307)
Q Consensus       249 ~dP~~RPs~~  258 (307)
                      ..|..||...
T Consensus       180 ~~~~ir~l~~  189 (725)
T KOG1093|consen  180 LEPIIRPLPM  189 (725)
T ss_pred             cccccccchh
Confidence            8898888543

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=88.00  E-value=0.71  Score=44.82  Aligned_cols=37  Identities=22%  Similarity=0.361  Sum_probs=30.6

Q ss_pred             cCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCCh
Q 045092           88 NNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSK  125 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~  125 (307)
                      ..|+ .+-|+.++-|+||+|++++|+.||||+.+..-.
T Consensus       126 ~eF~-~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~  162 (517)
T COG0661         126 SEFE-PEPIASASIAQVHRAVLKSGEEVAVKVQRPGIR  162 (517)
T ss_pred             HHcC-CCchhhhhHhhheeEEecCCCEEEEEecCCChH
Confidence            3454 367899999999999999999999999976543

>PRK10593 hypothetical protein; Provisional

Probab=84.57  E-value=8  Score=34.72  Aligned_cols=79  Identities=14%  Similarity=0.013  Sum_probs=56.2

Q ss_pred             CCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCC---CCccceeeeeecCCCCCccccchhhh
Q 045092           93 ENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQH---PNLVKLYRLCTETLKQPIVYMAPEYA  169 (307)
Q Consensus        93 ~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~g~~~~~~~~t~~y~aPE~~  169 (307)
                      ...||.|..+.||+....++ .+.+|..+.  ......|.+|...|+.+.-   ..+.+++++|.........|+..|++
T Consensus        19 ~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i   95 (297)
T PRK10593         19 VECISEQPYAALWALYDSQG-NPMPLMARS--FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERL   95 (297)
T ss_pred             eeecCCccceeEEEEEcCCC-CEEEEEecc--cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEecc
Confidence            46799999999999876555 456676432  1123578999999998843   46888998887654334468888888


Q ss_pred             ccCCC
Q 045092          170 KHGYL  174 (307)
Q Consensus       170 ~~~~~  174 (307)
                      .+...
T Consensus        96 ~G~~~  100 (297)
T PRK10593         96 RGVSV  100 (297)
T ss_pred             CCEec
Confidence            76544

>PLN02876 acyl-CoA dehydrogenase

Probab=83.30  E-value=59  Score=33.74  Aligned_cols=81  Identities=19%  Similarity=0.296  Sum_probs=56.0

Q ss_pred             CCcccCCCCeeEEEEEEcCC---CEEEEEEccCCC-hhcHHHHHHHHHHHhhCC-CCCc--cceeeeeecCCCCCccccc
Q 045092           93 ENEISERGFGPVYRGLLADG---KVIEVKQLSSKS-KQGNREIVNEIGMISALQ-HPNL--VKLYRLCTETLKQPIVYMA  165 (307)
Q Consensus        93 ~~~lG~G~~g~Vy~~~~~~~---~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~-h~ni--v~l~g~~~~~~~~t~~y~a  165 (307)
                      ...|+.|.+..+|+....++   ..+++|+..... ......+.+|+++|..+. |.++  .+++++|.+.......|+-
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV  122 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI  122 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence            46789999999999876543   356777754332 123357889999999995 6665  8888888765333345777


Q ss_pred             hhhhccCC
Q 045092          166 PEYAKHGY  173 (307)
Q Consensus       166 PE~~~~~~  173 (307)
                      .|++.+..
T Consensus       123 ME~v~G~~  130 (822)
T PLN02876        123 MEYLEGRI  130 (822)
T ss_pred             EEecCCcc
Confidence            78887543

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=82.89  E-value=0.57  Score=46.56  Aligned_cols=26  Identities=27%  Similarity=0.526  Sum_probs=22.4

Q ss_pred             hcccccccccCeeeeeeeccCCceee
Q 045092          264 LEDKAEVCSFGIVTLEIESGRSNVIC  289 (307)
Q Consensus       264 L~~~~~v~~~g~~~~e~~t~~~~~~~  289 (307)
                      .....|+|+||++++||.||++|+-.
T Consensus       755 YG~aADIWS~GCT~vEMATGrPPF~E  780 (1226)
T KOG4279|consen  755 YGKAADIWSFGCTMVEMATGRPPFVE  780 (1226)
T ss_pred             CCchhhhhhccceeEeeccCCCCeee
Confidence            34567999999999999999999854

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=81.88  E-value=2.6  Score=35.37  Aligned_cols=97  Identities=15%  Similarity=0.131  Sum_probs=61.5

Q ss_pred             CcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCC--CccceeeeeecCCCCCccccchhhhcc
Q 045092           94 NEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHP--NLVKLYRLCTETLKQPIVYMAPEYAKH  171 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~g~~~~~~~~t~~y~aPE~~~~  171 (307)
                      +.|+.|..+.||+....+ ..+++|.....  .....+.+|..++..+...  .+.+++.++......-..|+..|++.+
T Consensus         3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g   79 (239)
T PF01636_consen    3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPG   79 (239)
T ss_dssp             EEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred             ccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecc
Confidence            568999999999999866 68999986544  4456788899998888433  356777655443322234555565554


Q ss_pred             CCCCc-------hhHHHHHHHHHHHHHhC
Q 045092          172 GYLTD-------KAEVCSFGIVTLEIESG  193 (307)
Q Consensus       172 ~~~~~-------~sDV~s~Gvvl~elltg  193 (307)
                      .....       ...+..+|-.+.+|-.-
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~l~~lh~~  108 (239)
T PF01636_consen   80 RPLDDELSPEQRPELLRQLGRALAQLHQV  108 (239)
T ss_dssp             EEHHHTSTHHHHHHHHHHHHHHHHHHHHS
T ss_pred             ccccccccccccccccccchhhhhhcccc
Confidence            33222       23345677777776664

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=81.66  E-value=6.1  Score=38.28  Aligned_cols=54  Identities=19%  Similarity=0.227  Sum_probs=39.1

Q ss_pred             CeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeee
Q 045092          101 FGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCT  154 (307)
Q Consensus       101 ~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~  154 (307)
                      -.+.|++... +|..+..|++.....+.......-++.++++.|.|+|++.+++.
T Consensus       289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~  343 (655)
T KOG3741|consen  289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFL  343 (655)
T ss_pred             cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhh
Confidence            3567888844 78999999995433333323344677899999999999988776

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=81.61  E-value=2.2  Score=41.61  Aligned_cols=31  Identities=26%  Similarity=0.343  Sum_probs=27.5

Q ss_pred             CCcccCCCCeeEEEEEEcCCCEEEEEEccCC
Q 045092           93 ENEISERGFGPVYRGLLADGKVIEVKQLSSK  123 (307)
Q Consensus        93 ~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~  123 (307)
                      .+-||.-+.|.||++++++|+.||||+-+..
T Consensus       166 ~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~  196 (538)
T KOG1235|consen  166 EEPIAAASLAQVHRARLKNGEDVAVKVQHPG  196 (538)
T ss_pred             cchhhhcchhheEEEEecCCCEEEEEecCcC
Confidence            3678999999999999999999999998654

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=81.22  E-value=0.29  Score=47.38  Aligned_cols=24  Identities=29%  Similarity=0.526  Sum_probs=21.6

Q ss_pred             hcccccccccCeeeeeeeccCCce
Q 045092          264 LEDKAEVCSFGIVTLEIESGRSNV  287 (307)
Q Consensus       264 L~~~~~v~~~g~~~~e~~t~~~~~  287 (307)
                      -.++.|+|+||+|++||+|+..|+
T Consensus       288 csEKVDIwSfGVVLWEmLT~EiPY  311 (904)
T KOG4721|consen  288 CSEKVDIWSFGVVLWEMLTGEIPY  311 (904)
T ss_pred             cccccceehhHHHHHHHHhcCCCc
Confidence            356889999999999999999996

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=80.47  E-value=0.21  Score=40.46  Aligned_cols=26  Identities=23%  Similarity=0.186  Sum_probs=22.3

Q ss_pred             cccccccccCeeeeeeeccCCceeec
Q 045092          265 EDKAEVCSFGIVTLEIESGRSNVICR  290 (307)
Q Consensus       265 ~~~~~v~~~g~~~~e~~t~~~~~~~~  290 (307)
                      ....|+|++|++++|+++|+.|+...
T Consensus        82 ~~~~DiwSlG~il~elltg~~p~~~~  107 (176)
T smart00750       82 TEKADIYSLGITLYEALDYELPYNEE  107 (176)
T ss_pred             cchhhHHHHHHHHHHHHhCCCCcccc
Confidence            35689999999999999999997543

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=80.16  E-value=0.74  Score=40.74  Aligned_cols=26  Identities=27%  Similarity=0.416  Sum_probs=22.3

Q ss_pred             hcccccccccCeeeeeeeccCCceee
Q 045092          264 LEDKAEVCSFGIVTLEIESGRSNVIC  289 (307)
Q Consensus       264 L~~~~~v~~~g~~~~e~~t~~~~~~~  289 (307)
                      ..-.+|||++|++++|+.||+.|+..
T Consensus       271 YDiRaDVWSlGITlveLaTg~yPy~~  296 (391)
T KOG0983|consen  271 YDIRADVWSLGITLVELATGQYPYKG  296 (391)
T ss_pred             cchhhhhhhhccchhhhhcccCCCCC
Confidence            44567999999999999999999743

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	307
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		1e-11
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		5e-05
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		1e-11
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		4e-05
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		4e-09
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		6e-09
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		2e-05
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		4e-05
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		4e-05
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		4e-05
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		5e-05
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		5e-05
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		5e-05
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		5e-05
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		3e-04
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		4e-04
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		4e-04
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		4e-04
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		6e-04
1fvr_A	327	Tie2 Kinase Domain Length = 327		6e-04
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		6e-04
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		6e-04
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		7e-04
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		7e-04
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		7e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 78  FHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNR-EIVNEIG 136
           F LR+++ A++NF+++N +   GFG VY+G LADG ++ VK+L  +  QG   +   E+ 
Sbjct: 28  FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 137 MISALQHPNLVKLYRLCTETLKQPIVY 163
           MIS   H NL++L   C    ++ +VY
Sbjct: 88  MISMAVHRNLLRLRGFCMTPTERLLVY 114

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 161 IVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESG-RSNVICR-TKEDKFYLLDWLGSYLKR 218
           I ++APEY   G  ++K +V  +G++ LE+ +G R+  + R   +D   LLDW+   LK 
Sbjct: 207 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 266
Query: 219 ARKLNGASCSKFGFKFYRRTSDGNDQ----CSSSVTPTNRPLMSFVVSMLE 265
            +KL           +     +   Q    C+ S +P  RP MS VV MLE
Sbjct: 267 -KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQS-SPMERPKMSEVVRMLE 315

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 78  FHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNR-EIVNEIG 136
           F LR+++ A++NF ++N +   GFG VY+G LADG ++ VK+L  +  QG   +   E+ 
Sbjct: 20  FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 137 MISALQHPNLVKLYRLCTETLKQPIVY 163
           MIS   H NL++L   C    ++ +VY
Sbjct: 80  MISMAVHRNLLRLRGFCMTPTERLLVY 106

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 161 IVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESG-RSNVICR-TKEDKFYLLDWLGSYLKR 218
           I ++APEY   G  ++K +V  +G++ LE+ +G R+  + R   +D   LLDW+   LK 
Sbjct: 199 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 258
Query: 219 ARKLNGASCSKFGFKFYRRTSDGNDQ----CSSSVTPTNRPLMSFVVSMLE 265
            +KL           +     +   Q    C+ S +P  RP MS VV MLE
Sbjct: 259 -KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQS-SPMERPKMSEVVRMLE 307

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 110/262 (41%), Gaps = 33/262 (12%)
Query: 59  INPVISSIELKGLDLPTGSFH--LRQIKAATNNFASENEISERGFGPVYRGLLADGKVIE 116
           IN  +SS  L    +P  S+   L  ++ ATNNF  +  I    FG VY+G+L DG  + 
Sbjct: 12  INDALSSSYL----VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVA 67
Query: 117 VKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPE---YAKHGY 173
           +K+ + +S QG  E   EI  +S  +HP+LV L   C E  +  ++Y   E     +H Y
Sbjct: 68  LKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY 127
Query: 174 LTD----------KAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLN 223
            +D          + E+C      L     R+ +I R  +    LLD          K+ 
Sbjct: 128 GSDLPTMSMSWEQRLEICIGAARGLHYLHTRA-IIHRDVKSINILLDE-----NFVPKIT 181
Query: 224 GASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMS--FVVSMLEDKAEVCSFGIVTLEIE 281
               SK G      T  G       V  T   +    F+   L +K++V SFG+V  E+ 
Sbjct: 182 DFGISKKG------TELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
Query: 282 SGRSNVICRTKEDKFYLLDWVT 303
             RS ++     +   L +W  
Sbjct: 236 CARSAIVQSLPREMVNLAEWAV 257

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 111/255 (43%), Gaps = 19/255 (7%)
Query: 59  INPVISSIELKGLDLPTGSFH--LRQIKAATNNFASENEISERGFGPVYRGLLADGKVIE 116
           IN  +SS  L    +P  S+   L  ++ ATNNF  +  I    FG VY+G+L DG  + 
Sbjct: 12  INDALSSSYL----VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVA 67
Query: 117 VKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
           +K+ + +S QG  E   EI  +S  +HP+LV L   C E  +  ++Y   +Y ++G L  
Sbjct: 68  LKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIY---KYMENGNL-- 122
Query: 177 KAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF-- 234
           K  +    + T+ +   +   IC       + L       +  + +N      F  K   
Sbjct: 123 KRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITD 182
Query: 235 YRRTSDGNDQCSSSVTPTNRPLMS------FVVSMLEDKAEVCSFGIVTLEIESGRSNVI 288
           +  +  G +   + +    +  +       F+   L +K++V SFG+V  E+   RS ++
Sbjct: 183 FGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV 242
Query: 289 CRTKEDKFYLLDWVT 303
                +   L +W  
Sbjct: 243 QSLPREMVNLAEWAV 257

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 95/223 (42%), Gaps = 22/223 (9%)
Query: 77  SFHLRQIKAATNNFASE------NEISERGFGPVYRGLLADGKVIEVKQLSS----KSKQ 126
           SF   ++K  TNNF         N++ E GFG VY+G + +   + VK+L++     +++
Sbjct: 14  SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEE 72
Query: 127 GNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIV 186
             ++   EI +++  QH NLV+L    ++     +VY+   Y  +G L D+   C  G  
Sbjct: 73  LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYV---YMPNGSLLDRLS-CLDGTP 128
Query: 187 TL------EIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSD 240
            L      +I  G +N I    E+     D   + +        A  S FG         
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFT-AKISDFGLARASEKFA 187
Query: 241 GNDQCSSSVTPTNRPLMSFVVSMLEDKAEVCSFGIVTLEIESG 283
                S  V  T       +   +  K+++ SFG+V LEI +G
Sbjct: 188 QTVMXSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 230

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 86  ATNNFASENEISERGFGPVYRG-LLADGKVIEVKQLSSKSKQGNREIVN-------EIGM 137
           A N    E +I + GFG V++G L+ D  V+ +K L     +G  E++        E+ +
Sbjct: 17  ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 138 ISALQHPNLVKLYRL 152
           +S L HPN+VKLY L
Sbjct: 77  MSNLNHPNIVKLYGL 91

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 86  ATNNFASENEISERGFGPVYRG-LLADGKVIEVKQLSSKSKQGNREIVN-------EIGM 137
           A N    E +I + GFG V++G L+ D  V+ +K L     +G  E++        E+ +
Sbjct: 17  ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 138 ISALQHPNLVKLYRL 152
           +S L HPN+VKLY L
Sbjct: 77  MSNLNHPNIVKLYGL 91

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 86  ATNNFASENEISERGFGPVYRG-LLADGKVIEVKQLSSKSKQGNREIVN-------EIGM 137
           A N    E +I + GFG V++G L+ D  V+ +K L     +G  E++        E+ +
Sbjct: 17  ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 138 ISALQHPNLVKLYRL 152
           +S L HPN+VKLY L
Sbjct: 77  MSNLNHPNIVKLYGL 91

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 94/229 (41%), Gaps = 43/229 (18%)
Query: 73  LPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIV 132
           +P GS H+  I  +   F    EI    FG V+ G   +   + +K +   S   + + +
Sbjct: 15  VPRGSLHM-VIDPSELTFV--QEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSED-DFI 70
Query: 133 NEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES 192
            E  ++  L HP LV+LY +C   L+Q  + +  E+ +HG L+D       G+   E   
Sbjct: 71  EEAEVMMKLSHPKLVQLYGVC---LEQAPICLVFEFMEHGCLSDYLRT-QRGLFAAETLL 126
Query: 193 GRSNVICRTKEDKFYLLDWLGSYLKRA----RKLNGASC----------SKFGFKFYRRT 238
           G    +C              +YL+ A    R L   +C          S FG   +   
Sbjct: 127 GMCLDVCEGM-----------AYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL- 174
Query: 239 SDGNDQCSSSVTPTNRPLM-----SFVVSMLEDKAEVCSFGIVTLEIES 282
              +DQ +SS T T  P+       F  S    K++V SFG++  E+ S
Sbjct: 175 ---DDQYTSS-TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 219

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 28/226 (12%)
Query: 77  SFHLRQIKAATNNFASE------NEISERGFGPVYRGLLADGKVIEVKQLSS----KSKQ 126
           SF   ++K  TNNF         N++ E GFG VY+G + +   + VK+L++     +++
Sbjct: 14  SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEE 72
Query: 127 GNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIV 186
             ++   EI +++  QH NLV+L    ++     +VY+   Y  +G L D+   C  G  
Sbjct: 73  LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYV---YMPNGSLLDRLS-CLDGTP 128
Query: 187 TL------EIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSD 240
            L      +I  G +N I    E+     D   + +        A  S FG     R S+
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFT-AKISDFGLA---RASE 184
Query: 241 GNDQCSSS---VTPTNRPLMSFVVSMLEDKAEVCSFGIVTLEIESG 283
              Q       V  T       +   +  K+++ SFG+V LEI +G
Sbjct: 185 KFAQTVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 230

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 77  SFHLRQIKAATNNFASE------NEISERGFGPVYRGLLADGKVIEVKQLSS----KSKQ 126
           SF   ++K  TNNF         N+  E GFG VY+G + +   + VK+L++     +++
Sbjct: 5   SFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEE 63
Query: 127 GNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIV 186
             ++   EI + +  QH NLV+L    ++     +VY+   Y  +G L D+   C  G  
Sbjct: 64  LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYV---YXPNGSLLDRLS-CLDGTP 119
Query: 187 TL------EIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSD 240
            L      +I  G +N I    E+     D   + +        A  S FG     R S+
Sbjct: 120 PLSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFT-AKISDFGLA---RASE 175
Query: 241 GNDQ---CSSSVTPTNRPLMSFVVSMLEDKAEVCSFGIVTLEIESG 283
              Q    S  V  T       +   +  K+++ SFG+V LEI +G
Sbjct: 176 KFAQXVXXSRIVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIITG 221

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 22/223 (9%)
Query: 77  SFHLRQIKAATNNFASE------NEISERGFGPVYRGLLADGKVIEVKQLSS----KSKQ 126
           SF   ++K  TNNF         N++ E GFG VY+G + +   + VK+L++     +++
Sbjct: 8   SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEE 66
Query: 127 GNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIV 186
             ++   EI +++  QH NLV+L    ++     +VY+   Y  +G L D+   C  G  
Sbjct: 67  LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYV---YMPNGSLLDRLS-CLDGTP 122
Query: 187 TL------EIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSD 240
            L      +I  G +N I    E+     D   + +        A  S FG         
Sbjct: 123 PLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFT-AKISDFGLARASEKFA 181
Query: 241 GNDQCSSSVTPTNRPLMSFVVSMLEDKAEVCSFGIVTLEIESG 283
                   V  T       +   +  K+++ SFG+V LEI +G
Sbjct: 182 QXVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 224

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 84/208 (40%), Gaps = 40/208 (19%)
Query: 94  NEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLC 153
            EI    FG V+ G   +   + +K +  +      + + E  ++  L HP LV+LY +C
Sbjct: 14  QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 154 TETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLG 213
              L+Q  + +  E+ +HG L+D       G+   E   G    +C              
Sbjct: 73  ---LEQAPICLVTEFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGM----------- 117
Query: 214 SYLKRA----RKLNGASC----------SKFGFKFYRRTSDGNDQCSSSVTPTNRPLM-- 257
           +YL+ A    R L   +C          S FG   +      +DQ +SS T T  P+   
Sbjct: 118 AYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL----DDQYTSS-TGTKFPVKWA 172
Query: 258 ---SFVVSMLEDKAEVCSFGIVTLEIES 282
               F  S    K++V SFG++  E+ S
Sbjct: 173 SPEVFSFSRYSSKSDVWSFGVLMWEVFS 200

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Query: 88  NNFASENEISERGFGPVYRGLL------ADGKVIEVKQLSSKSKQGNREIVNEIGMISAL 141
           +N   + E+ E  FG V+           D  ++ VK L   S    ++   E  +++ L
Sbjct: 13  HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 72
Query: 142 QHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYL 174
           QH ++VK Y +C E    P++ M  EY KHG L
Sbjct: 73  QHEHIVKFYGVCVEG--DPLI-MVFEYMKHGDL 102

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 101 FGPVYRGLLADGKV-IEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ 159
           FG VY G+     + + VK L   + +   E + E  ++  ++HPNLV+L  +CT   ++
Sbjct: 24  FGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT---RE 79
Query: 160 PIVYMAPEYAKHGYLTDKAEVCS 182
           P  Y+  E+  +G L D    C+
Sbjct: 80  PPFYIITEFMTYGNLLDYLRECN 102

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 57/117 (48%), Gaps = 8/117 (6%)
Query: 70  GLDLPTGSFHLRQI---KAATNNFASENEISERGFGPVYRGLLADGKV-IEVKQLSSKSK 125
           G+DL T + + + +   +    +   ++++    +G VY G+     + + VK L   + 
Sbjct: 11  GVDLGTENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTM 70
Query: 126 QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCS 182
           +   E + E  ++  ++HPNLV+L  +CT    +P  Y+  EY  +G L D    C+
Sbjct: 71  E-VEEFLKEAAVMKEIKHPNLVQLLGVCT---LEPPFYIVTEYMPYGNLLDYLRECN 123

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 88  NNFASENEISERGFGPVYR------GLLADGKVIEVKQLSSKSKQGNREIVNEIGMISAL 141
           N+   ++ I E  FG V +      GL  D  +  +K+ +SK    +R+   E+ ++  L
Sbjct: 15  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD--HRDFAGELEVLCKL 72
Query: 142 -QHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
             HPN++ L   C     +  +Y+A EYA HG L D
Sbjct: 73  GHHPNIINLLGACEH---RGYLYLAIEYAPHGNLLD 105

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 88  NNFASENEISERGFGPVYR------GLLADGKVIEVKQLSSKSKQGNREIVNEIGMISAL 141
           N+   ++ I E  FG V +      GL  D  +  +K+ +SK    +R+   E+ ++  L
Sbjct: 25  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD--HRDFAGELEVLCKL 82
Query: 142 -QHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
             HPN++ L   C     +  +Y+A EYA HG L D
Sbjct: 83  GHHPNIINLLGACEH---RGYLYLAIEYAPHGNLLD 115

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 84/208 (40%), Gaps = 40/208 (19%)
Query: 94  NEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLC 153
            EI    FG V+ G   +   + +K +  +      + + E  ++  L HP LV+LY +C
Sbjct: 16  QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 154 TETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLG 213
              L+Q  + +  E+ +HG L+D       G+   E   G    +C              
Sbjct: 75  ---LEQAPICLVFEFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGM----------- 119
Query: 214 SYLKRA----RKLNGASC----------SKFGFKFYRRTSDGNDQCSSSVTPTNRPLM-- 257
           +YL+ A    R L   +C          S FG   +      +DQ +SS T T  P+   
Sbjct: 120 AYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL----DDQYTSS-TGTKFPVKWA 174
Query: 258 ---SFVVSMLEDKAEVCSFGIVTLEIES 282
               F  S    K++V SFG++  E+ S
Sbjct: 175 SPEVFSFSRYSSKSDVWSFGVLMWEVFS 202

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 88  NNFASENEISERGFGPVYR------GLLADGKVIEVKQLSSKSKQGNREIVNEIGMISAL 141
           N+   ++ I E  FG V +      GL  D  +  +K+ +SK    +R+   E+ ++  L
Sbjct: 22  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD--HRDFAGELEVLCKL 79
Query: 142 -QHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
             HPN++ L   C     +  +Y+A EYA HG L D
Sbjct: 80  GHHPNIINLLGACEH---RGYLYLAIEYAPHGNLLD 112

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 84/208 (40%), Gaps = 40/208 (19%)
Query: 94  NEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLC 153
            EI    FG V+ G   +   + +K +  +      + + E  ++  L HP LV+LY +C
Sbjct: 13  QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 154 TETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLG 213
              L+Q  + +  E+ +HG L+D       G+   E   G    +C              
Sbjct: 72  ---LEQAPICLVFEFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGM----------- 116
Query: 214 SYLKRA----RKLNGASC----------SKFGFKFYRRTSDGNDQCSSSVTPTNRPLM-- 257
           +YL+ A    R L   +C          S FG   +      +DQ +SS T T  P+   
Sbjct: 117 AYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL----DDQYTSS-TGTKFPVKWA 171
Query: 258 ---SFVVSMLEDKAEVCSFGIVTLEIES 282
               F  S    K++V SFG++  E+ S
Sbjct: 172 SPEVFSFSRYSSKSDVWSFGVLMWEVFS 199

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 84/208 (40%), Gaps = 40/208 (19%)
Query: 94  NEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLC 153
            EI    FG V+ G   +   + +K +  +      + + E  ++  L HP LV+LY +C
Sbjct: 11  QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 154 TETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLG 213
              L+Q  + +  E+ +HG L+D       G+   E   G    +C              
Sbjct: 70  ---LEQAPICLVFEFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGM----------- 114
Query: 214 SYLKRA----RKLNGASC----------SKFGFKFYRRTSDGNDQCSSSVTPTNRPLM-- 257
           +YL+ A    R L   +C          S FG   +      +DQ +SS T T  P+   
Sbjct: 115 AYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL----DDQYTSS-TGTKFPVKWA 169
Query: 258 ---SFVVSMLEDKAEVCSFGIVTLEIES 282
               F  S    K++V SFG++  E+ S
Sbjct: 170 SPEVFSFSRYSSKSDVWSFGVLMWEVFS 197

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 84/208 (40%), Gaps = 40/208 (19%)
Query: 94  NEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLC 153
            EI    FG V+ G   +   + +K +  +      + + E  ++  L HP LV+LY +C
Sbjct: 13  QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 154 TETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLG 213
              L+Q  + +  E+ +HG L+D       G+   E   G    +C              
Sbjct: 72  ---LEQAPICLVFEFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGM----------- 116
Query: 214 SYLKRA----RKLNGASC----------SKFGFKFYRRTSDGNDQCSSSVTPTNRPLM-- 257
           +YL+ A    R L   +C          S FG   +      +DQ +SS T T  P+   
Sbjct: 117 AYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVL----DDQYTSS-TGTKFPVKWA 171
Query: 258 ---SFVVSMLEDKAEVCSFGIVTLEIES 282
               F  S    K++V SFG++  E+ S
Sbjct: 172 SPEVFSFSRYSSKSDVWSFGVLMWEVFS 199

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	307
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	4e-34
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	7e-19
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	2e-05
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	5e-33
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	5e-18
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	4e-06
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	4e-29
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-17
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-04
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	5e-12
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	8e-12
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	9e-12
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	6e-11
3soc_A	322	Activin receptor type-2A; structural genomics cons	6e-11
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-05
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-10
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	9e-10
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	9e-10
4aoj_A	329	High affinity nerve growth factor receptor; transf	1e-09
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	1e-09
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	3e-09
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	3e-09
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	5e-09
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	6e-09
3pls_A	298	Macrophage-stimulating protein receptor; protein k	6e-09
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	9e-09
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-08
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	1e-08
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-08
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	1e-08
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-08
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-08
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	3e-08
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	3e-08
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	3e-08
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	4e-08
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	4e-08
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	4e-08
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	5e-08
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	6e-08
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	6e-08
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	6e-08
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	7e-08
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	8e-08
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	8e-08
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	9e-08
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	1e-07
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-07
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-07
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-07
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	1e-07
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	1e-07
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-07
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-07
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-07
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	2e-07
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-07
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-07
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-07
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	3e-07
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	3e-07
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	3e-07
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	4e-07
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	4e-07
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	5e-07
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-06
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-06
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-06
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-06
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-06
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	3e-06
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	3e-06
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	3e-06
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	3e-06
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	4e-06
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	4e-06
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	5e-06
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	5e-06
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	5e-06
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	6e-06
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	7e-06
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	8e-06
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	9e-06
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	9e-06
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-05
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-05
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-05
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-05
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-05
3q4u_A	301	Activin receptor type-1; structural genomics conso	3e-05
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	3e-05
2a19_B	284	Interferon-induced, double-stranded RNA-activated	3e-05
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	3e-05
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-05
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	3e-05
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	4e-05
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	5e-05
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	6e-05
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	6e-05
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	6e-05
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	6e-05
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	6e-05
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	7e-05
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	8e-05
3bhy_A	283	Death-associated protein kinase 3; death associate	9e-05
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	1e-04
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-04
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-04
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-04
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-04
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-04
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-04
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-04
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	3e-04
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	3e-04
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	3e-04
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	3e-04
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	3e-04
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	4e-04
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	4e-04
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	5e-04
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	7e-04
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	7e-04
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	9e-04

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  125 bits (317), Expect = 4e-34
 Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 3/99 (3%)

Query: 78  FHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGM 137
             L  ++ ATNNF  +  I    FG VY+G+L DG  + +K+ + +S QG  E   EI  
Sbjct: 29  VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIET 88

Query: 138 ISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
           +S  +HP+LV L   C E  +  ++Y   +Y ++G L  
Sbjct: 89  LSFCRHPHLVSLIGFCDERNEMILIY---KYMENGNLKR 124

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 84.2 bits (209), Expect = 7e-19
 Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 12/111 (10%)

Query: 163 YMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRAR-- 220
           Y+ PEY   G LT+K++V SFG+V  E+   RS ++     +   L +W        +  
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE 266

Query: 221 -----KLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED 266
                 L      K   +  R+  D   +C +  +  +RP M  V+  LE 
Sbjct: 267 QIVDPNLAD----KIRPESLRKFGDTAVKCLAL-SSEDRPSMGDVLWKLEY 312

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 263 MLEDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWV 302
            L +K++V SFG+V  E+   RS ++     +   L +W 
Sbjct: 217 RLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWA 256

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  123 bits (310), Expect = 5e-33
 Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 4/95 (4%)

Query: 75  TGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGN-REIVN 133
              F LR+++ A++NF+++N +   GFG VY+G LADG ++ VK+L  +  QG   +   
Sbjct: 17  LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQT 76

Query: 134 EIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEY 168
           E+ MIS   H NL++L   C    ++ +VY    Y
Sbjct: 77  EVEMISMAVHRNLLRLRGFCMTPTERLLVY---PY 108

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 81.9 bits (203), Expect = 5e-18
 Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 14/112 (12%)

Query: 163 YMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICR--TKEDKFYLLDWLGSYLKRAR 220
           ++APEY   G  ++K +V  +G++ LE+ +G+          +D   LLDW+   LK  +
Sbjct: 201 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 260

Query: 221 -------KLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLE 265
                   L G     +  +   +       C+ S +P  RP MS VV MLE
Sbjct: 261 LEALVDVDLQG----NYKDEEVEQLIQVALLCTQS-SPMERPKMSEVVRMLE 307

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 46.4 bits (111), Expect = 4e-06
 Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 263 MLEDKAEVCSFGIVTLEIESGRSNVICR--TKEDKFYLLDWV 302
              +K +V  +G++ LE+ +G+          +D   LLDWV
Sbjct: 211 KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  112 bits (282), Expect = 4e-29
 Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 11/99 (11%)

Query: 67  ELKGLDLPTGSFHLRQIKAATNNFASE------NEISERGFGPVYRGLLADGKVIEVKQL 120
            L+  D    SF   ++K  TNNF         N++ E GFG VY+G + +   + VK+L
Sbjct: 4   SLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKL 62

Query: 121 SS----KSKQGNREIVNEIGMISALQHPNLVKLYRLCTE 155
           ++     +++  ++   EI +++  QH NLV+L    ++
Sbjct: 63  AAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSD 101

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 79.9 bits (198), Expect = 2e-17
 Identities = 26/106 (24%), Positives = 39/106 (36%), Gaps = 7/106 (6%)

Query: 163 YMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKL 222
           YMAPE    G +T K+++ SFG+V LEI +G   V      +   LLD         + +
Sbjct: 201 YMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAV--DEHREPQLLLDIKEEIEDEEKTI 257

Query: 223 NG---ASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLE 265
                   +               QC        RP +  V  +L+
Sbjct: 258 EDYIDKKMNDADSTSVEAMYSVASQCLHE-KKNKRPDIKKVQQLLQ 302

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 41.4 bits (98), Expect = 2e-04
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)

Query: 264 LEDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWV 302
           +  K+++ SFG+V LEI +G   V      +   LLD  
Sbjct: 211 ITPKSDIYSFGVVLLEIITGLPAV--DEHREPQLLLDIK 247

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 64.7 bits (158), Expect = 5e-12
 Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 6/81 (7%)

Query: 101 FGPVYRGL---LADGKVIEV--KQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTE 155
           FG V       L D     V  KQL        R+   EI ++ AL    +VK   +   
Sbjct: 36  FGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYG 95

Query: 156 TLKQPIVYMAPEYAKHGYLTD 176
             +Q +  +  EY   G L D
Sbjct: 96  PGRQSL-RLVMEYLPSGCLRD 115

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 63.5 bits (155), Expect = 8e-12
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 6/81 (7%)

Query: 101 FGPVYRGL---LADGKVIEV--KQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTE 155
           FG V       L D     V  K+L   +++  R+   EI ++ +LQH N+VK   +C  
Sbjct: 23  FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS 82

Query: 156 TLKQPIVYMAPEYAKHGYLTD 176
             ++ +  +  EY  +G L D
Sbjct: 83  AGRRNL-KLIMEYLPYGSLRD 102

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 63.5 bits (155), Expect = 9e-12
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 6/81 (7%)

Query: 101 FGPVYRGL---LADGKVIEV--KQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTE 155
           FG V       L D     V  K+L   +++  R+   EI ++ +LQH N+VK   +C  
Sbjct: 54  FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS 113

Query: 156 TLKQPIVYMAPEYAKHGYLTD 176
             ++ +  +  EY  +G L D
Sbjct: 114 AGRRNL-KLIMEYLPYGSLRD 133

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 61.2 bits (149), Expect = 6e-11
 Identities = 20/82 (24%), Positives = 29/82 (35%), Gaps = 7/82 (8%)

Query: 101 FGPVYRGLL---ADGKVIEV--KQL-SSKSKQGNREIVNEIGMISALQHPNLVKLYRLCT 154
           FG V         DG    V  K L +    Q       EI ++  L H +++K    C 
Sbjct: 44  FGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCE 103

Query: 155 ETLKQPIVYMAPEYAKHGYLTD 176
           +     +  +  EY   G L D
Sbjct: 104 DAGAASL-QLVMEYVPLGSLRD 124

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 61.3 bits (149), Expect = 6e-11
 Identities = 15/104 (14%), Positives = 35/104 (33%), Gaps = 11/104 (10%)

Query: 78  FHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQG-NREIVNEIG 136
                +   +         +   FG V++  L   + + VK    + KQ    E   E+ 
Sbjct: 14  LGTENLYFQSMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQDKQSWQNE--YEVY 70

Query: 137 MISALQHPNLVKLYRLCTETLKQP----IVYMAPEYAKHGYLTD 176
            +  ++H N+++                ++     + + G L+D
Sbjct: 71  SLPGMKHENILQFIGAEKRGTSVDVDLWLIT---AFHEKGSLSD 111

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 11/57 (19%), Positives = 21/57 (36%), Gaps = 5/57 (8%)

Query: 163 YMAPEYAKHGYLTD-----KAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGS 214
           YMAPE  +           + ++ + G+V  E+ S  +       E      + +G 
Sbjct: 199 YMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ 255

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 59.6 bits (145), Expect = 2e-10
 Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 7/82 (8%)

Query: 101 FGPVYRGLL---ADGKVIEV--KQL-SSKSKQGNREIVNEIGMISALQHPNLVKLYRLCT 154
           FG V         D    +V  K L          ++  EI ++  L H N+VK   +CT
Sbjct: 34  FGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICT 93

Query: 155 ETLKQPIVYMAPEYAKHGYLTD 176
           E     I  +  E+   G L +
Sbjct: 94  EDGGNGI-KLIMEFLPSGSLKE 114

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 57.6 bits (140), Expect = 9e-10
 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 9/82 (10%)

Query: 101 FGPVYRGLLADGKVIE------VKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCT 154
           FG V+     +    +      VK L   +    ++   E  +++ LQH ++VK Y +C 
Sbjct: 28  FGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCG 87

Query: 155 ETLKQPIVYMAPEYAKHGYLTD 176
           +    P+  M  EY KHG L  
Sbjct: 88  D--GDPL-IMVFEYMKHGDLNK 106

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 57.9 bits (140), Expect = 9e-10
 Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 12/97 (12%)

Query: 86  ATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQG-NREIVNEIGMISALQHP 144
             +N      I    +G VY+G L D + + VK  S  ++Q    E    I  +  ++H 
Sbjct: 11  DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEK--NIYRVPLMEHD 67

Query: 145 NLVKLYRLCTETLKQP-----IVYMAPEYAKHGYLTD 176
           N+ +                 +V    EY  +G L  
Sbjct: 68  NIARFIVGDERVTADGRMEYLLVM---EYYPNGSLXK 101

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 57.3 bits (139), Expect = 1e-09
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 9/80 (11%)

Query: 101 FGPVYRGLLADGKVIE------VKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCT 154
           FG V+     +    +      VK L   S+   ++   E  +++ LQH ++V+ + +CT
Sbjct: 54  FGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCT 113

Query: 155 ETLKQPIVYMAPEYAKHGYL 174
           E   +P+  M  EY +HG L
Sbjct: 114 E--GRPL-LMVFEYMRHGDL 130

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 56.8 bits (138), Expect = 1e-09
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)

Query: 93  ENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRL 152
              I +  FG V  G     KV  VK +  K+    +  + E  +++ L+H NLV+L  +
Sbjct: 26  LQTIGKGEFGDVMLGDYRGNKV-AVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGV 82

Query: 153 CTETLKQPIVYMAPEYAKHGYLTD 176
             E  ++  +Y+  EY   G L D
Sbjct: 83  IVE--EKGGLYIVTEYMAKGSLVD 104

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 56.6 bits (137), Expect = 3e-09
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 9/86 (10%)

Query: 93  ENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGN--REIVNEIGMISALQHPNLVKLY 150
              I +  FG V  G     KV  VK +    K     +  + E  +++ L+H NLV+L 
Sbjct: 198 LQTIGKGEFGDVMLGDYRGNKVA-VKCI----KNDATAQAFLAEASVMTQLRHSNLVQLL 252

Query: 151 RLCTETLKQPIVYMAPEYAKHGYLTD 176
            +  E  ++  +Y+  EY   G L D
Sbjct: 253 GVIVE--EKGGLYIVTEYMAKGSLVD 276

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 56.1 bits (136), Expect = 3e-09
 Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 11/83 (13%)

Query: 101 FGPVYRGLL--ADGKVIEV-----KQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLC 153
           FG V RG      GK + V     K       +   + + E+  + +L H NL++LY + 
Sbjct: 31  FGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVV 90

Query: 154 TETLKQPIVYMAPEYAKHGYLTD 176
                 P+  M  E A  G L D
Sbjct: 91  LT---PPM-KMVTELAPLGSLLD 109

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 55.0 bits (133), Expect = 5e-09
 Identities = 18/84 (21%), Positives = 29/84 (34%), Gaps = 11/84 (13%)

Query: 101 FGPVYRGLL------ADGKVIEV--KQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRL 152
           F  +++G+             EV  K L    +  +        M+S L H +LV  Y +
Sbjct: 21  FTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGV 80

Query: 153 CTETLKQPIVYMAPEYAKHGYLTD 176
           C          +  E+ K G L  
Sbjct: 81  CVC--GDEN-ILVQEFVKFGSLDT 101

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 55.4 bits (134), Expect = 6e-09
 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 4/77 (5%)

Query: 101 FGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ 159
           FG   +      G+V+ +K+L    ++  R  + E+ ++  L+HPN++K   +     K 
Sbjct: 23  FGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY---KD 79

Query: 160 PIVYMAPEYAKHGYLTD 176
             +    EY K G L  
Sbjct: 80  KRLNFITEYIKGGTLRG 96

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 55.0 bits (133), Expect = 6e-09
 Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 7/81 (8%)

Query: 101 FGPVYRGLLADGKVIE----VKQLSSKSKQGNR-EIVNEIGMISALQHPNLVKLYRLCTE 155
           FG VY G   D         +K LS  ++       + E  ++  L HPN++ L  +   
Sbjct: 34  FGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLP 93

Query: 156 TLKQPIVYMAPEYAKHGYLTD 176
              + + ++   Y  HG L  
Sbjct: 94  --PEGLPHVLLPYMCHGDLLQ 112

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 54.6 bits (132), Expect = 9e-09
 Identities = 18/81 (22%), Positives = 32/81 (39%), Gaps = 9/81 (11%)

Query: 101 FGPVYRGLL-ADGKVIEV--KQL--SSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTE 155
           FG V +G       V  V  K L   +       E++ E  ++  L +P +V++  +C  
Sbjct: 30  FGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE- 88

Query: 156 TLKQPIVYMAPEYAKHGYLTD 176
              +    +  E A+ G L  
Sbjct: 89  --AESW-MLVMEMAELGPLNK 106

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 8/88 (9%)

Query: 93  ENEISERGFGPVYRGLLADGKVIEVKQL----SSKSKQGNREIVNEIGMISALQHPNLVK 148
           E  I   GFG VYR     G  + VK           Q    +  E  + + L+HPN++ 
Sbjct: 12  EEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70

Query: 149 LYRLCTETLKQPIVYMAPEYAKHGYLTD 176
           L  +C    K+P + +  E+A+ G L  
Sbjct: 71  LRGVCL---KEPNLCLVMEFARGGPLNR 95

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 54.5 bits (132), Expect = 1e-08
 Identities = 20/82 (24%), Positives = 45/82 (54%), Gaps = 10/82 (12%)

Query: 101 FGPVYRGLL-ADGKVIE----VKQL-SSKSKQGNREIVNEIGMISALQHPNLVKLYRLCT 154
           FG VY+GL   +G+ ++    +K+L  + S + N+EI++E  +++++ +P++ +L  +C 
Sbjct: 28  FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 87

Query: 155 ETLKQPIVYMAPEYAKHGYLTD 176
                 +  +  +    G L D
Sbjct: 88  ---TSTV-QLITQLMPFGCLLD 105

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 54.1 bits (131), Expect = 1e-08
 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 9/81 (11%)

Query: 101 FGPVYRGLL--ADGKVIEV--KQL-SSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTE 155
           FG VY G+     G+ I V  K      +     + ++E  ++  L HP++VKL  +   
Sbjct: 25  FGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE- 83

Query: 156 TLKQPIVYMAPEYAKHGYLTD 176
             ++P  ++  E   +G L  
Sbjct: 84  --EEPT-WIIMELYPYGELGH 101

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 53.8 bits (130), Expect = 1e-08
 Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 8/88 (9%)

Query: 93  ENEISERGFGPVYRGLL-ADGKVIEV--KQL-SSKSKQGNREIVNEIGMISALQHPNLVK 148
           + E+    FG V +G+     K I+V  K L     K    E++ E  ++  L +P +V+
Sbjct: 15  DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 74

Query: 149 LYRLCTETLKQPIVYMAPEYAKHGYLTD 176
           L  +C     + +  +  E A  G L  
Sbjct: 75  LIGVCQA---EAL-MLVMEMAGGGPLHK 98

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 54.0 bits (130), Expect = 2e-08
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 7/79 (8%)

Query: 101 FGPVYRGLL--ADGKVIEV--KQL-SSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTE 155
           FG VY G L   DGK I    K L          + + E  ++    HPN++ L  +C  
Sbjct: 102 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 161

Query: 156 TLKQPIVYMAPEYAKHGYL 174
           +   P+V +   Y KHG L
Sbjct: 162 SEGSPLVVL--PYMKHGDL 178

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 53.4 bits (129), Expect = 2e-08
 Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 7/79 (8%)

Query: 101 FGPVYRGLL--ADGKVIEV--KQLSSKSKQGNR-EIVNEIGMISALQHPNLVKLYRLCTE 155
           FG VY G L   DGK I    K L+  +  G   + + E  ++    HPN++ L  +C  
Sbjct: 38  FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 97

Query: 156 TLKQPIVYMAPEYAKHGYL 174
           +   P+V +   Y KHG L
Sbjct: 98  SEGSPLVVL--PYMKHGDL 114

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 53.4 bits (129), Expect = 3e-08
 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 5/78 (6%)

Query: 101 FGPVYRGLLADGKV-IEVKQL-SSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK 158
           FG V+ G L      + VK    +       + + E  ++    HPN+V+L  +CT+  K
Sbjct: 127 FGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ--K 184

Query: 159 QPIVYMAPEYAKHGYLTD 176
           QPI Y+  E  + G    
Sbjct: 185 QPI-YIVMELVQGGDFLT 201

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 53.0 bits (128), Expect = 3e-08
 Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 10/83 (12%)

Query: 101 FGPVYRGLLADGKVIE------VKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLC 153
           FG VY+G L      E      +K L  K       E  +E  + + LQHPN+V L  + 
Sbjct: 22  FGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVV 81

Query: 154 TETLKQPIVYMAPEYAKHGYLTD 176
           T+   QP+  M   Y  HG L +
Sbjct: 82  TK--DQPL-SMIFSYCSHGDLHE 101

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 53.1 bits (128), Expect = 3e-08
 Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 8/82 (9%)

Query: 101 FGPVYRGLLADGKVIE----VKQL--SSKSKQGNREIVNEIGMISALQHPNLVKLYRLCT 154
           FG V  G L           VK +   + S++   E ++E   +    HPN+++L  +C 
Sbjct: 47  FGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI 106

Query: 155 ET--LKQPIVYMAPEYAKHGYL 174
           E      P   +   + K+G L
Sbjct: 107 EMSSQGIPKPMVILPFMKYGDL 128

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 52.7 bits (127), Expect = 4e-08
 Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 2/99 (2%)

Query: 81  RQIKAATNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMIS 139
             +     ++    ++ E GF  V     L DG    +K++    +Q   E   E  M  
Sbjct: 22  HMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHR 81

Query: 140 ALQHPNLVKLY-RLCTETLKQPIVYMAPEYAKHGYLTDK 177
              HPN+++L      E   +   ++   + K G L ++
Sbjct: 82  LFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNE 120

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 52.7 bits (127), Expect = 4e-08
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 9/83 (10%)

Query: 101 FGPVYRGLL--ADGKVIEV--KQL--SSKSKQGNREIVNEIGMISALQHPNLVKLYRLCT 154
           FG V    L   DG  ++V  K L     +     E + E   +    HP++ KL  +  
Sbjct: 36  FGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSL 95

Query: 155 E---TLKQPIVYMAPEYAKHGYL 174
                 + PI  +   + KHG L
Sbjct: 96  RSRAKGRLPIPMVILPFMKHGDL 118

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 52.7 bits (127), Expect = 4e-08
 Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 10/82 (12%)

Query: 101 FGPVYRGLL---ADGKVIEV--KQL-SSKSKQGNREIVNEIGMISALQHPNLVKLYRLCT 154
           FG V++G+     +   I V  K +     +Q  + + + +  I +L H ++V+L  LC 
Sbjct: 26  FGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP 85

Query: 155 ETLKQPIVYMAPEYAKHGYLTD 176
                 +  +  +Y   G L D
Sbjct: 86  G---SSL-QLVTQYLPLGSLLD 103

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 52.3 bits (126), Expect = 5e-08
 Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 4/86 (4%)

Query: 95  EISERGFGPVYRGL-LADGKVIEVKQ--LSSKSKQGNREIVNEIGMISALQHPNLVKLYR 151
           EI    F  VY+GL       +   +      +K   +    E  M+  LQHPN+V+ Y 
Sbjct: 33  EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD 92

Query: 152 LCTETLK-QPIVYMAPEYAKHGYLTD 176
               T+K +  + +  E    G L  
Sbjct: 93  SWESTVKGKKCIVLVTELMTSGTLKT 118

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 51.9 bits (125), Expect = 6e-08
 Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 9/81 (11%)

Query: 101 FGPVYRGLL--ADGKVIEV--KQL-SSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTE 155
           FG V++G+    +   + V  K   +  S     + + E   +    HP++VKL  + T 
Sbjct: 28  FGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT- 86

Query: 156 TLKQPIVYMAPEYAKHGYLTD 176
             + P+ ++  E    G L  
Sbjct: 87  --ENPV-WIIMELCTLGELRS 104

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 53.0 bits (127), Expect = 6e-08
 Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 8/80 (10%)

Query: 101 FGPVYRGLL-ADGKVIEV--KQL-SSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTET 156
           FG V +G+     K I+V  K L     K    E++ E  ++  L +P +V+L  +C   
Sbjct: 349 FGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-- 406

Query: 157 LKQPIVYMAPEYAKHGYLTD 176
             + +  +  E A  G L  
Sbjct: 407 -AEAL-MLVMEMAGGGPLHK 424

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 51.9 bits (125), Expect = 6e-08
 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 13/92 (14%)

Query: 93  ENEISERGFGPVYRG-LLADGKVIEVKQLSSKSKQGN-------REIVNEIGMISALQHP 144
           E +I + GFG V++G L+ D  V+ +K L     +G        +E   E+ ++S L HP
Sbjct: 24  EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83

Query: 145 NLVKLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
           N+VKLY L           M  E+   G L  
Sbjct: 84  NIVKLYGLMHNPP-----RMVMEFVPCGDLYH 110

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 51.9 bits (125), Expect = 7e-08
 Identities = 20/82 (24%), Positives = 45/82 (54%), Gaps = 10/82 (12%)

Query: 101 FGPVYRGLL-ADGKVIE----VKQL-SSKSKQGNREIVNEIGMISALQHPNLVKLYRLCT 154
           FG VY+GL   +G+ ++    +K+L  + S + N+EI++E  +++++ +P++ +L  +C 
Sbjct: 28  FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 87

Query: 155 ETLKQPIVYMAPEYAKHGYLTD 176
                 +  +  +    G L D
Sbjct: 88  ---TSTV-QLITQLMPFGCLLD 105

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 51.9 bits (125), Expect = 8e-08
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 10/81 (12%)

Query: 101 FGPVYRGLLADGKVIE------VKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLC 153
           FG V++         E      VK L  + S     +   E  +++   +PN+VKL  +C
Sbjct: 60  FGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC 119

Query: 154 TETLKQPIVYMAPEYAKHGYL 174
                +P+  +  EY  +G L
Sbjct: 120 AV--GKPM-CLLFEYMAYGDL 137

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 51.4 bits (124), Expect = 8e-08
 Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 11/79 (13%)

Query: 101 FGPVYRGLLADGKVIEVKQLSSKSKQGN---REIVNEIGMISALQHPNLVKLYRLCTETL 157
           FG V+ G       + VK L    KQG+      + E  ++  LQH  LV+LY + T   
Sbjct: 26  FGEVWMGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT--- 78

Query: 158 KQPIVYMAPEYAKHGYLTD 176
           ++PI Y+  EY ++G L D
Sbjct: 79  QEPI-YIITEYMENGSLVD 96

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 51.5 bits (124), Expect = 9e-08
 Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 10/81 (12%)

Query: 101 FGPVYRGLLADGKVIE------VKQLSSKSKQGNR-EIVNEIGMISALQHPNLVKLYRLC 153
           FG VY G ++            VK L     + +  + + E  +IS   H N+V+   + 
Sbjct: 43  FGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVS 102

Query: 154 TETLKQPIVYMAPEYAKHGYL 174
            +    P  ++  E    G L
Sbjct: 103 LQ--SLPR-FILMELMAGGDL 120

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 51.5 bits (124), Expect = 1e-07
 Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 10/83 (12%)

Query: 101 FGPVYRGLLADGKVIE------VKQLSSKSKQGNR-EIVNEIGMISALQHPNLVKLYRLC 153
           FG V +      K         VK L   +      ++++E  ++  + HP+++KLY  C
Sbjct: 36  FGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGAC 95

Query: 154 TETLKQPIVYMAPEYAKHGYLTD 176
           ++    P+  +  EYAK+G L  
Sbjct: 96  SQ--DGPL-LLIVEYAKYGSLRG 115

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 52.0 bits (125), Expect = 1e-07
 Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 11/87 (12%)

Query: 93  ENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGN---REIVNEIGMISALQHPNLVKL 149
           E ++    FG V+         + VK +    K G+      + E  ++  LQH  LVKL
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTM----KPGSMSVEAFLAEANVMKTLQHDKLVKL 248

Query: 150 YRLCTETLKQPIVYMAPEYAKHGYLTD 176
           + + T   K+PI Y+  E+   G L D
Sbjct: 249 HAVVT---KEPI-YIITEFMAKGSLLD 271

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 8/78 (10%)

Query: 101 FGPVYRGLLADGKVIEVKQL--SSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK 158
           FG V  G       + +K +   S S+    E + E  ++  L H  LV+LY +CT+  +
Sbjct: 37  FGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGVCTK--Q 91

Query: 159 QPIVYMAPEYAKHGYLTD 176
           +PI ++  EY  +G L +
Sbjct: 92  RPI-FIITEYMANGCLLN 108

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 51.2 bits (123), Expect = 1e-07
 Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 8/84 (9%)

Query: 93  ENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRL 152
           E  +    FG V +      K + +KQ+  +S+   +  + E+  +S + HPN+VKLY  
Sbjct: 13  EEVVGRGAFGVVCKAKW-RAKDVAIKQI--ESESERKAFIVELRQLSRVNHPNIVKLYGA 69

Query: 153 CTETLKQPIVYMAPEYAKHGYLTD 176
           C   +      +  EYA+ G L +
Sbjct: 70  CLNPV-----CLVMEYAEGGSLYN 88

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 51.8 bits (124), Expect = 1e-07
 Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 9/81 (11%)

Query: 101 FGPVYRGLL--ADGKVIEV--KQL-SSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTE 155
           FG V++G+    +   + V  K   +  S     + + E   +    HP++VKL  + T 
Sbjct: 403 FGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT- 461

Query: 156 TLKQPIVYMAPEYAKHGYLTD 176
             + P+ ++  E    G L  
Sbjct: 462 --ENPV-WIIMELCTLGELRS 479

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 10/81 (12%)

Query: 101 FGPVYRGLLADGKVIE------VKQLSSKSKQGNR-EIVNEIGMISALQHPNLVKLYRLC 153
           FG VY G+       E      +K ++  +    R E +NE  ++      ++V+L  + 
Sbjct: 38  FGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97

Query: 154 TETLKQPIVYMAPEYAKHGYL 174
           ++   QP   +  E    G L
Sbjct: 98  SQ--GQPT-LVIMELMTRGDL 115

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 51.2 bits (123), Expect = 2e-07
 Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 10/81 (12%)

Query: 101 FGPVYRGLLADGKVIE------VKQLSSKSKQGNR-EIVNEIGMISALQHPNLVKLYRLC 153
           FG VY G ++            VK L     + +  + + E  +IS   H N+V+   + 
Sbjct: 84  FGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVS 143

Query: 154 TETLKQPIVYMAPEYAKHGYL 174
            +    P  ++  E    G L
Sbjct: 144 LQ--SLPR-FILLELMAGGDL 161

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 101 FGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLY 150
           +G VY G  L++   I +K++  +  + ++ +  EI +   L+H N+V+  
Sbjct: 35  YGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYL 85

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 8/89 (8%)

Query: 93  ENEISERGFGPVYRGLL--ADGKVIEV--KQL-SSKSKQGNREIVNEIGMISALQHPNLV 147
           +  +    FG V  G L     K I V  K L    +++  R+ + E  ++    HPN++
Sbjct: 50  DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109

Query: 148 KLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
           +L  + T+   +P+  +  EY ++G L  
Sbjct: 110 RLEGVVTK--SKPV-MIVTEYMENGSLDS 135

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 18/82 (21%), Positives = 41/82 (50%), Gaps = 9/82 (10%)

Query: 101 FGPVYRGLLADGKVIE-----VKQL-SSKSKQGNREIVNEIGMISALQHPNLVKLYRLCT 154
           FG VY+G+L      +     +K L +  +++   + + E G++    H N+++L  + +
Sbjct: 57  FGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS 116

Query: 155 ETLKQPIVYMAPEYAKHGYLTD 176
           +   +P+  +  EY ++G L  
Sbjct: 117 K--YKPM-MIITEYMENGALDK 135

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 6/86 (6%)

Query: 93  ENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGN--REIVNEIGMISALQHPNLVKLY 150
           + +I    FG V+R     G  + VK L  +        E + E+ ++  L+HPN+V   
Sbjct: 42  KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100

Query: 151 RLCTETLKQPIVYMAPEYAKHGYLTD 176
              T   + P + +  EY   G L  
Sbjct: 101 GAVT---QPPNLSIVTEYLSRGSLYR 123

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 50.3 bits (121), Expect = 2e-07
 Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 8/86 (9%)

Query: 93  ENEISERGFGPVYRGLLADGKVIEVKQL--SSKSKQGNREIVNEIGMISALQHPNLVKLY 150
             EI    FG V+ G   +   + +K +   + S++   + + E  ++  L HP LV+LY
Sbjct: 13  VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLY 69

Query: 151 RLCTETLKQPIVYMAPEYAKHGYLTD 176
            +C E  + PI  +  E+ +HG L+D
Sbjct: 70  GVCLE--QAPI-CLVTEFMEHGCLSD 92

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 93  ENEISERGFGPVYRGLLA-DGKVIEV--KQL-SSKSKQGNREIVNEIGMISAL-QHPNLV 147
           ++ I E  FG V +  +  DG  ++   K++    SK  +R+   E+ ++  L  HPN++
Sbjct: 30  QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89

Query: 148 KLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
            L   C    +  + Y+A EYA HG L D
Sbjct: 90  NLLGACEH--RGYL-YLAIEYAPHGNLLD 115

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 50.0 bits (120), Expect = 3e-07
 Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 8/81 (9%)

Query: 101 FGPVYRGLL--ADGKVIEV--KQL-SSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTE 155
            G V  G L     + + V  K L +  +++  R+ ++E  ++    HPN+++L  + T 
Sbjct: 62  SGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR 121

Query: 156 TLKQPIVYMAPEYAKHGYLTD 176
              +    +  EY ++G L  
Sbjct: 122 --GRLA-MIVTEYMENGSLDT 139

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 50.1 bits (120), Expect = 3e-07
 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 11/87 (12%)

Query: 93  ENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGN---REIVNEIGMISALQHPNLVKL 149
           E ++ +  FG V+ G       + +K L    K G       + E  ++  L+H  LV+L
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQL 244

Query: 150 YRLCTETLKQPIVYMAPEYAKHGYLTD 176
           Y + +   ++PI Y+  EY   G L D
Sbjct: 245 YAVVS---EEPI-YIVTEYMSKGSLLD 267

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 50.2 bits (120), Expect = 3e-07
 Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 13/89 (14%)

Query: 93  ENEISERGFGPVYRGLLADGKVIEV--KQLSSKSKQGN---REIVNEIGMISALQHPNLV 147
           ++++    +G VY G+      + V  K L    K+      E + E  ++  ++HPNLV
Sbjct: 225 KHKLGGGQYGEVYEGVW-KKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHPNLV 279

Query: 148 KLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
           +L  +CT   + P  Y+  E+  +G L D
Sbjct: 280 QLLGVCTR--EPPF-YIITEFMTYGNLLD 305

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 50.3 bits (120), Expect = 4e-07
 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 11/87 (12%)

Query: 93  ENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGN---REIVNEIGMISALQHPNLVKL 149
           E ++ +  FG V+ G       + +K L    K G       + E  ++  L+H  LV+L
Sbjct: 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQL 327

Query: 150 YRLCTETLKQPIVYMAPEYAKHGYLTD 176
           Y + +E   +PI Y+  EY   G L D
Sbjct: 328 YAVVSE---EPI-YIVTEYMSKGSLLD 350

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 49.5 bits (119), Expect = 4e-07
 Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 8/78 (10%)

Query: 101 FGPVYRGLLADGKVIEVKQL--SSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK 158
           FG V  G       + VK +   S S+    E   E   +  L HP LVK Y +C++  +
Sbjct: 21  FGVVKLGKWKGQYDVAVKMIKEGSMSED---EFFQEAQTMMKLSHPKLVKFYGVCSK--E 75

Query: 159 QPIVYMAPEYAKHGYLTD 176
            PI Y+  EY  +G L +
Sbjct: 76  YPI-YIVTEYISNGCLLN 92

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 49.2 bits (118), Expect = 5e-07
 Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 11/88 (12%)

Query: 93  ENEISERGFGPVYRGLLADGKV-IEVKQLSSKSKQGN---REIVNEIGMISALQHPNLVK 148
           ++++    +G VY G+     + + VK L    K+      E + E  ++  ++HPNLV+
Sbjct: 18  KHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHPNLVQ 73

Query: 149 LYRLCTETLKQPIVYMAPEYAKHGYLTD 176
           L  +CT   + P  Y+  E+  +G L D
Sbjct: 74  LLGVCTR--EPPF-YIITEFMTYGNLLD 98

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 48.4 bits (116), Expect = 1e-06
 Identities = 17/86 (19%), Positives = 35/86 (40%), Gaps = 4/86 (4%)

Query: 93  ENEISERGFGPVYRGLLADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLY 150
             +++E   G +++G    G  I VK L  +  S + +R+   E   +    HPN++ + 
Sbjct: 15  LTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVL 73

Query: 151 RLCTETLKQPIVYMAPEYAKHGYLTD 176
             C          +   +  +G L +
Sbjct: 74  GACQSPPAPHP-TLITHWMPYGSLYN 98

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 13/86 (15%)

Query: 101 FGPVYRGLLADGKVIE--------VKQLSSKSKQGNR-EIVNEIGMISAL-QHPNLVKLY 150
           FG V           +        VK L   + + +  ++V+E+ M+  + +H N++ L 
Sbjct: 48  FGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLL 107

Query: 151 RLCTETLKQPIVYMAPEYAKHGYLTD 176
             CT+    P+ Y+  EYA  G L +
Sbjct: 108 GACTQ--DGPL-YVIVEYASKGNLRE 130

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 11/84 (13%)

Query: 101 FGPVYRGLLADGKVIE------VKQLSSKSKQGNR-EIVNEIGMISAL-QHPNLVKLYRL 152
           FG V           +      VK L   +    R  +++E+ ++S L  H N+V L   
Sbjct: 36  FGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGA 95

Query: 153 CTETLKQPIVYMAPEYAKHGYLTD 176
           CT     P   +  EY  +G L +
Sbjct: 96  CTI--GGPT-LVITEYCCYGDLLN 116

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 7/84 (8%)

Query: 93  ENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGN--REIVNEIGMISALQHPNLVKLY 150
              I +  FG VY G    G+V  ++ +  +    +  +    E+      +H N+V   
Sbjct: 38  GELIGKGRFGQVYHGRW-HGEV-AIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95

Query: 151 RLCTETLKQPIVYMAPEYAKHGYL 174
             C      P + +     K   L
Sbjct: 96  GACM---SPPHLAIITSLCKGRTL 116

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 47.1 bits (112), Expect = 3e-06
 Identities = 17/80 (21%), Positives = 30/80 (37%), Gaps = 3/80 (3%)

Query: 100 GFGPVYRGL-LADGKVIEVKQLSSKSKQGNRE-IVNEIGMISALQHPNLVKLYRLCTETL 157
               V+RG     G +  +K  ++ S     +  + E  ++  L H N+VKL+    E  
Sbjct: 21  ATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA-IEEET 79

Query: 158 KQPIVYMAPEYAKHGYLTDK 177
                 +  E+   G L   
Sbjct: 80  TTRHKVLIMEFCPCGSLYTV 99

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 47.0 bits (112), Expect = 3e-06
 Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 4/76 (5%)

Query: 79  HLRQIKAATN---NFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNE 134
            LR +    +      S  +I E   G V        G+ + VK +  + +Q    + NE
Sbjct: 33  ALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNE 92

Query: 135 IGMISALQHPNLVKLY 150
           + ++   QH N+V++Y
Sbjct: 93  VVIMRDYQHFNVVEMY 108

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 46.9 bits (112), Expect = 3e-06
 Identities = 16/75 (21%), Positives = 36/75 (48%), Gaps = 6/75 (8%)

Query: 101 FGPVYRGLLADGKV-IEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ 159
           FG VY+G    G V +++  +++ + Q  +   NE+G++   +H N++      T     
Sbjct: 37  FGTVYKGKW-HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST----A 91

Query: 160 PIVYMAPEYAKHGYL 174
           P + +  ++ +   L
Sbjct: 92  PQLAIVTQWCEGSSL 106

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 46.9 bits (112), Expect = 3e-06
 Identities = 14/62 (22%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 90  FASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVK 148
           +    +I +   G VY  + +A G+ + ++Q++ + +     I+NEI ++   ++PN+V 
Sbjct: 22  YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81

Query: 149 LY 150
             
Sbjct: 82  YL 83

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 46.9 bits (112), Expect = 4e-06
 Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 10/84 (11%)

Query: 101 FGPVYRGLLADGKVIE------VKQLSSKSKQGNR-EIVNEIGMISAL-QHPNLVKLYRL 152
           FG V                  VK L   +       +++E+ ++  +  H N+V L   
Sbjct: 40  FGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 99

Query: 153 CTETLKQPIVYMAPEYAKHGYLTD 176
           CT+    P+  +  E+ K G L+ 
Sbjct: 100 CTKP-GGPL-MVIVEFCKFGNLST 121

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 46.9 bits (112), Expect = 4e-06
 Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 4/85 (4%)

Query: 70  GLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQ--LSSKSKQG 127
           G+DL T + + + +      ++   +I   G   V++ L    ++  +K   L     Q 
Sbjct: 10  GVDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQT 69

Query: 128 NREIVNEIGMISALQHPNL--VKLY 150
                NEI  ++ LQ  +   ++LY
Sbjct: 70  LDSYRNEIAYLNKLQQHSDKIIRLY 94

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 46.5 bits (111), Expect = 5e-06
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 11/84 (13%)

Query: 101 FGPVYRGLLADGKVIE------VKQL-SSKSKQGNREIVNEIGMISAL-QHPNLVKLYRL 152
           FG V           +      VK L S+        +++E+ ++S L QH N+V L   
Sbjct: 59  FGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGA 118

Query: 153 CTETLKQPIVYMAPEYAKHGYLTD 176
           CT     P+  +  EY  +G L +
Sbjct: 119 CTH--GGPV-LVITEYCCYGDLLN 139

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 46.5 bits (111), Expect = 5e-06
 Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 11/84 (13%)

Query: 101 FGPVYRGLLADGKVIE------VKQLSSKSKQGNR-EIVNEIGMISAL-QHPNLVKLYRL 152
           FG V                  VK L  K+    R  +++E+ M++ L  H N+V L   
Sbjct: 58  FGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGA 117

Query: 153 CTETLKQPIVYMAPEYAKHGYLTD 176
           CT     PI Y+  EY  +G L +
Sbjct: 118 CTL--SGPI-YLIFEYCCYGDLLN 138

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 46.2 bits (110), Expect = 5e-06
 Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)

Query: 90  FASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVK 148
           +    E+ +  FG VY+      G +   K + +KS++   + + EI +++   HP +VK
Sbjct: 21  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80

Query: 149 LY 150
           L 
Sbjct: 81  LL 82

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 46.4 bits (110), Expect = 6e-06
 Identities = 28/137 (20%), Positives = 53/137 (38%), Gaps = 8/137 (5%)

Query: 46  HSESACEEILFLKINPVISSIELKGLDLPTGSFHLRQIKAATNNFASENEISE---RG-F 101
                 E+   ++    +SS     +      ++ + ++   ++     +I E    G F
Sbjct: 111 RGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAF 170

Query: 102 GPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQP 160
           G V+R    A G     K + +  +     +  EI  +S L+HP LV L+    E   + 
Sbjct: 171 GVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF-EDDNE- 228

Query: 161 IVYMAPEYAKHGYLTDK 177
            + M  E+   G L +K
Sbjct: 229 -MVMIYEFMSGGELFEK 244

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 46.2 bits (110), Expect = 7e-06
 Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 13/86 (15%)

Query: 101 FGPVYRGLLADGKVIE--------VKQLSSKSKQGNR-EIVNEIGMISAL-QHPNLVKLY 150
           FG V           +        VK L S + + +  ++++E+ M+  + +H N++ L 
Sbjct: 82  FGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLL 141

Query: 151 RLCTETLKQPIVYMAPEYAKHGYLTD 176
             CT+    P+ Y+  EYA  G L +
Sbjct: 142 GACTQ--DGPL-YVIVEYASKGNLRE 164

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 45.9 bits (109), Expect = 8e-06
 Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 8/106 (7%)

Query: 77  SFHLRQIKAATNNFASENEISE---RG-FGPVYRGL-LADGKVIEVKQLSSKSKQGNREI 131
            +  + ++    +     +I E    G FG V+R +  A G+V   K +++        +
Sbjct: 36  KYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTV 95

Query: 132 VNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDK 177
            NEI +++ L HP L+ L+    E   +  + +  E+   G L D+
Sbjct: 96  KNEISIMNQLHHPKLINLHDAF-EDKYE--MVLILEFLSGGELFDR 138

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 46.2 bits (109), Expect = 9e-06
 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 5/83 (6%)

Query: 100 GFGPVYRGL-LADGKVIEVKQLSSKSKQGNRE-IVNEIGMISALQHPNLVKLYRL---CT 154
           GFG V R +    G+ + +KQ   +    NRE    EI ++  L HPN+V    +     
Sbjct: 26  GFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQ 85

Query: 155 ETLKQPIVYMAPEYAKHGYLTDK 177
           +     +  +A EY + G L   
Sbjct: 86  KLAPNDLPLLAMEYCEGGDLRKY 108

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 45.8 bits (109), Expect = 9e-06
 Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 13/86 (15%)

Query: 101 FGPVYRGLLADGKVIE--------VKQLSSKSKQGNR-EIVNEIGMISAL-QHPNLVKLY 150
           FG V           +        VK L   + + +  ++V+E+ M+  + +H N++ L 
Sbjct: 94  FGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLL 153

Query: 151 RLCTETLKQPIVYMAPEYAKHGYLTD 176
             CT+    P+ Y+  EYA  G L +
Sbjct: 154 GACTQ--DGPL-YVIVEYASKGNLRE 176

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 45.6 bits (108), Expect = 1e-05
 Identities = 17/80 (21%), Positives = 30/80 (37%), Gaps = 3/80 (3%)

Query: 100 GFGPVYRGL-LADGKVIEVKQLSSKSKQGNRE-IVNEIGMISALQHPNLVKLYRLCTETL 157
               V+RG     G +  +K  ++ S     +  + E  ++  L H N+VKL+    E  
Sbjct: 21  ATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA-IEEET 79

Query: 158 KQPIVYMAPEYAKHGYLTDK 177
                 +  E+   G L   
Sbjct: 80  TTRHKVLIMEFCPCGSLYTV 99

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 10/83 (12%)

Query: 101 FGPVYRGL-LADG-----KVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCT 154
           +G   +    +DG     K ++   ++   KQ    +V+E+ ++  L+HPN+V+ Y    
Sbjct: 19  YGRCQKIRRKSDGKILVWKELDYGSMTEAEKQ---MLVSEVNLLRELKHPNIVRYYDRII 75

Query: 155 ETLKQPIVYMAPEYAKHGYLTDK 177
           +      +Y+  EY + G L   
Sbjct: 76  DRTNT-TLYIVMEYCEGGDLASV 97

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 10/121 (8%)

Query: 64  SSIELKGLDLPTGSFHLRQIKAATNNFASENEISE-----RG-FGPVYRGL-LADGKVIE 116
           +S     +  P   F  R + A      S   +S+      G FG V++    A G  + 
Sbjct: 59  TSALAVDIPAPPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLA 118

Query: 117 VKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
            K + ++  +   E+ NEI +++ L H NL++LY    E+     + +  EY   G L D
Sbjct: 119 AKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF-ESKND--IVLVMEYVDGGELFD 175

Query: 177 K 177
           +
Sbjct: 176 R 176

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 3/65 (4%)

Query: 87  TNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPN 145
              F    ++ E  +G VY+ +    G+++ +KQ+  +S    +EI+ EI ++     P+
Sbjct: 28  EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPH 85

Query: 146 LVKLY 150
           +VK Y
Sbjct: 86  VVKYY 90

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 19/102 (18%), Positives = 47/102 (46%), Gaps = 12/102 (11%)

Query: 87  TNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPN 145
            ++F     + +  FG V +     D +   +K++   +++    I++E+ ++++L H  
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQY 63

Query: 146 LVKLY----------RLCTETLKQPIVYMAPEYAKHGYLTDK 177
           +V+ Y          +  T   K+  +++  EY ++G L D 
Sbjct: 64  VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDL 105

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 5/79 (6%)

Query: 100 GFGPVYRGLLADGKVIEVKQLSSKSKQG-NREIVNEIGMISALQHPNLVKLYRLCTETLK 158
            +G V+RG    G+ + VK  SS+ ++   RE   E+     L+H N++        +  
Sbjct: 20  RYGEVWRGSW-QGENVAVKIFSSRDEKSWFRET--ELYNTVMLRHENILGFIASDMTSRH 76

Query: 159 QPIVY-MAPEYAKHGYLTD 176
                 +   Y + G L D
Sbjct: 77  SSTQLWLITHYHEMGSLYD 95

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 90  FASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNRE-IVNEIGMISALQHPNLV 147
           F    +I +  FG V++G+     KV+ +K +  +  +   E I  EI ++S    P + 
Sbjct: 24  FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83

Query: 148 KLY 150
           K Y
Sbjct: 84  KYY 86

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 21/104 (20%), Positives = 37/104 (35%), Gaps = 18/104 (17%)

Query: 88  NNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNL 146
            +F     I   GFG V++     DGK   +K++    K  N +   E+  ++ L H N+
Sbjct: 11  MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRV----KYNNEKAEREVKALAKLDHVNI 66

Query: 147 VKLY-------------RLCTETLKQPIVYMAPEYAKHGYLTDK 177
           V                   +   K   +++  E+   G L   
Sbjct: 67  VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQW 110

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 11/84 (13%)

Query: 100 GFGPVYRGLLAD------GKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLC 153
           GF   +    AD      GK++    L  K  Q  + +  EI +  +L H ++V  +   
Sbjct: 53  GFAKCFEISDADTKEVFAGKIVPKSLLL-KPHQREK-MSMEISIHRSLAHQHVVGFHG-F 109

Query: 154 TETLKQPIVYMAPEYAKHGYLTDK 177
            E      V++  E  +   L + 
Sbjct: 110 FEDNDF--VFVVLELCRRRSLLEL 131

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 43.7 bits (104), Expect = 3e-05
 Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 11/84 (13%)

Query: 100 GFGPVYRGLLAD------GKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLC 153
           GF   +    AD      GK++    L  K  Q  + +  EI +  +L H ++V  +   
Sbjct: 27  GFAKCFEISDADTKEVFAGKIVPKSLLL-KPHQREK-MSMEISIHRSLAHQHVVGFHG-F 83

Query: 154 TETLKQPIVYMAPEYAKHGYLTDK 177
            E      V++  E  +   L + 
Sbjct: 84  FEDNDF--VFVVLELCRRRSLLEL 105

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 24/119 (20%)

Query: 69  KGLDLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGL-LADGKVIEVKQ--LSSKSK 125
            G+DL T + + + +      +    +I E  FG         DG+   +K+  +S  S 
Sbjct: 9   SGVDLGTENLYFQSM----EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSS 64

Query: 126 QGNREIVNEIGMISALQHPNLVKLY-------RLCTETLKQPIVYMAPEYAKHGYLTDK 177
           +   E   E+ +++ ++HPN+V+          L        IV M  +Y + G L  +
Sbjct: 65  KEREESRREVAVLANMKHPNIVQYRESFEENGSLY-------IV-M--DYCEGGDLFKR 113

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 43.6 bits (103), Expect = 4e-05
 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 4/65 (6%)

Query: 90  FASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGN---REIVNEIGMISALQHPN 145
           F+   EI    FG VY    + + +V+ +K++S   KQ N   ++I+ E+  +  L+HPN
Sbjct: 56  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115

Query: 146 LVKLY 150
            ++  
Sbjct: 116 TIQYR 120

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 43.3 bits (102), Expect = 5e-05
 Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 4/61 (6%)

Query: 94  NEISERGFGPVYRGLLADGKVIEVKQ--LSSKSKQGNREIVNEIGMISALQHPNL--VKL 149
            +I   G   V++ L    ++  +K   L     Q      NEI  ++ LQ  +   ++L
Sbjct: 62  KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 121

Query: 150 Y 150
           Y
Sbjct: 122 Y 122

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 43.2 bits (102), Expect = 6e-05
 Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 7/84 (8%)

Query: 96  ISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIG-MISALQHPNLVKLYRLC 153
           ++E GF  VY    +  G+   +K+L S  ++ NR I+ E+  M     HPN+V+     
Sbjct: 36  LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95

Query: 154 TETLKQP-----IVYMAPEYAKHG 172
           +   ++         +  E  K  
Sbjct: 96  SIGKEESDTGQAEFLLLTELCKGQ 119

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 43.1 bits (102), Expect = 6e-05
 Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 11/87 (12%)

Query: 99  RG-FGPVYR------GLLADGKVIEVKQLSSKSKQGNREIV-NEIGMISALQHPNLVKLY 150
            G F  V +      GL    K I+ +Q  +  +   RE +  E+ ++  + HPN++ L+
Sbjct: 22  SGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLH 81

Query: 151 RLCTETLKQPIVYMAPEYAKHGYLTDK 177
            +  E      V +  E    G L D 
Sbjct: 82  DVY-ENRTD--VVLILELVSGGELFDF 105

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 43.2 bits (102), Expect = 6e-05
 Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 4/61 (6%)

Query: 94  NEISERGFGPVYRGLLADGKVIEVKQ--LSSKSKQGNREIVNEIGMISALQHPNL--VKL 149
            +I   G   V++ L    ++  +K   L     Q      NEI  ++ LQ  +   ++L
Sbjct: 15  KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 74

Query: 150 Y 150
           Y
Sbjct: 75  Y 75

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 43.1 bits (102), Expect = 6e-05
 Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 21/88 (23%)

Query: 101 FGPVYRGL-LADGKVIEVKQL---SSKSKQGNREIVNEIGMISALQHPNLVKLY------ 150
           F  VYR   L DG  + +K++        +   + + EI ++  L HPN++K Y      
Sbjct: 45  FSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED 104

Query: 151 -RLCTETLKQPIVYMAPEYAKHGYLTDK 177
             L        IV +  E A  G L+  
Sbjct: 105 NELN-------IV-L--ELADAGDLSRM 122

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 42.6 bits (101), Expect = 7e-05
 Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 22/128 (17%)

Query: 79  HLRQIKAATNNFASENEISE---------RG-FGPVYRG-LLADGKVIEVKQLSSKSKQG 127
           H     +   N   +  I +          G FG V+     + G    +K ++    Q 
Sbjct: 3   HHHHHSSGRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQV 62

Query: 128 NREIV-NEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIV 186
             E +  EI ++ +L HPN++K++ +  E      +Y+  E  + G L ++       IV
Sbjct: 63  PMEQIEAEIEVLKSLDHPNIIKIFEVF-EDYHN--MYIVMETCEGGELLER-------IV 112

Query: 187 TLEIESGR 194
           + +     
Sbjct: 113 SAQARGKA 120

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 42.6 bits (101), Expect = 8e-05
 Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 11/87 (12%)

Query: 99  RG-FGPVYR------GLLADGKVIEVKQLSSKSKQGNREIV-NEIGMISALQHPNLVKLY 150
            G F  V +      GL    K I+ +Q  +  +  +RE +  E+ ++  + H N++ L+
Sbjct: 22  SGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLH 81

Query: 151 RLCTETLKQPIVYMAPEYAKHGYLTDK 177
            +  E      V +  E    G L D 
Sbjct: 82  DVY-ENRTD--VVLILELVSGGELFDF 105

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 42.2 bits (100), Expect = 9e-05
 Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 11/87 (12%)

Query: 99  RG-FGPVYR------GLLADGKVIEVKQLSSKSKQGNREIV-NEIGMISALQHPNLVKLY 150
            G F  V +      G     K I+ ++LSS  +  +RE +  E+ ++  ++HPN++ L+
Sbjct: 15  SGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLH 74

Query: 151 RLCTETLKQPIVYMAPEYAKHGYLTDK 177
            +  E      V +  E    G L D 
Sbjct: 75  DIF-ENKTD--VVLILELVSGGELFDF 98

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 11/87 (12%)

Query: 99  RG-FGPVYR------GLLADGKVIEVKQLSSKSKQGNREIV-NEIGMISALQHPNLVKLY 150
            G F  V +      GL    K I+ ++  S  +  +RE +  E+ ++  +QHPN++ L+
Sbjct: 21  SGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLH 80

Query: 151 RLCTETLKQPIVYMAPEYAKHGYLTDK 177
            +  E      V +  E    G L D 
Sbjct: 81  EVY-ENKTD--VILILELVAGGELFDF 104

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 20/113 (17%), Positives = 44/113 (38%), Gaps = 13/113 (11%)

Query: 75  TGSFHLRQIKAATNNFASENEISE---RG-FGPVYRGL-LADG-----KVIEVKQLSSKS 124
           +G  +L     +      +  +     +G +G V   +          K++   ++   +
Sbjct: 9   SGRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQIN 68

Query: 125 KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDK 177
            +    I  E+ ++  L HPN+ +LY +  E  +   + +  E    G+L DK
Sbjct: 69  PKDVERIKTEVRLMKKLHHPNIARLYEVY-EDEQY--ICLVMELCHGGHLLDK 118

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 11/84 (13%)

Query: 100 GFGPVYR------GLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLC 153
            F  VYR      GL    K+I+ K +  K+    R + NE+ +   L+HP++++LY   
Sbjct: 23  SFAGVYRAESIHTGLEVAIKMIDKKAMY-KAGMVQR-VQNEVKIHCQLKHPSILELYN-Y 79

Query: 154 TETLKQPIVYMAPEYAKHGYLTDK 177
            E      VY+  E   +G +   
Sbjct: 80  FEDSNY--VYLVLEMCHNGEMNRY 101

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 41.8 bits (98), Expect = 1e-04
 Identities = 10/53 (18%), Positives = 20/53 (37%), Gaps = 3/53 (5%)

Query: 101 FGPVYRGL-LADGKVIEVKQ--LSSKSKQGNREIVNEIGMISALQHPNLVKLY 150
              V        G+ + V++  L + S +    +  E+ +     HPN+V   
Sbjct: 40  LMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYR 92

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 2e-04
 Identities = 44/316 (13%), Positives = 94/316 (29%), Gaps = 70/316 (22%)

Query: 9   CGKQVIADGNTTFEDDSDAAGASKLAPLSRKTY-ISWLH-SESACEEILFLKINPVISSI 66
            GK  +A                      +  + I WL+       E +   +  ++  I
Sbjct: 161 SGKTWVA-----------LDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQI 209

Query: 67  ELKGLDLPTGSFHLRQ----IKAATNNFASENEISERGFGPVYRGLL-----ADGKVIEV 117
           +         S +++     I+A          +  + +      LL      + K    
Sbjct: 210 DPNWTSRSDHSSNIKLRIHSIQAELRRL-----LKSKPYE---NCLLVLLNVQNAKAWNA 261

Query: 118 KQLSSK----SKQGNREIVNEIGMISALQHPNLVKLYRLCT--ETLKQPIVYMAPEYAKH 171
             LS K    ++   +++ + +   +   H +L       T  E              K 
Sbjct: 262 FNLSCKILLTTR--FKQVTDFLSAATT-THISLDHHSMTLTPDEVKSL--------LLK- 309

Query: 172 GYLTDKA-----EVCSFGIVTLEIESGRSNVICRTKEDKFYLLD-WLGSYLKRARKLNGA 225
            YL  +      EV +       +     ++I  +  D     D W      +   +  +
Sbjct: 310 -YLDCRPQDLPREVLT--TNPRRL-----SIIAESIRDGLATWDNWKHVNCDKLTTIIES 361

Query: 226 SCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSML-EDKAEVCSFGIVTLEIESGR 284
           S +      YR+  D       SV P +  + + ++S++  D  +     +V  ++    
Sbjct: 362 SLNVLEPAEYRKMFD-----RLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVN-KLHK-Y 414

Query: 285 SNVICRTKEDKFYLLD 300
           S V  + KE    +  
Sbjct: 415 SLVEKQPKESTISIPS 430

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 12/65 (18%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 88  NNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNRE-IVNEIGMISALQHPN 145
           +++  +  I       V         + + +K+++ +  Q + + ++ EI  +S   HPN
Sbjct: 15  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74

Query: 146 LVKLY 150
           +V  Y
Sbjct: 75  IVSYY 79

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 11/83 (13%)

Query: 101 FGPVYR------GLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCT 154
           FG VY         +   KV+   QL  K+   ++ +  E+ + S L+HPN+++LY    
Sbjct: 22  FGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQ-LRREVEIQSHLRHPNILRLYGYFH 79

Query: 155 ETLKQPIVYMAPEYAKHGYLTDK 177
           +  +   VY+  EYA  G +  +
Sbjct: 80  DATR---VYLILEYAPLGTVYRE 99

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 5/79 (6%)

Query: 100 GFGPVYRGLLADGKVIEVKQLSSKSKQG-NREIVNEIGMISALQHPNLVKLYRLCTE-TL 157
            +G V+ G    G+ + VK   +  +    RE   EI     ++H N++       + T 
Sbjct: 49  RYGEVWMGKW-RGEKVAVKVFFTTEEASWFRE--TEIYQTVLMRHENILGFIAADIKGTG 105

Query: 158 KQPIVYMAPEYAKHGYLTD 176
               +Y+  +Y ++G L D
Sbjct: 106 SWTQLYLITDYHENGSLYD 124

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 41.5 bits (97), Expect = 2e-04
 Identities = 10/103 (9%), Positives = 25/103 (24%), Gaps = 9/103 (8%)

Query: 81  RQIKAATNNFASENEISERGFGPVYRG------LLADGKVIEVKQLSSKSKQGNREIVNE 134
            + +  +      + + E  F  VY           + +   +K     +          
Sbjct: 58  TEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQL 117

Query: 135 IGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDK 177
           +  +        +K Y             +  E   +G L + 
Sbjct: 118 MERLKPSMQHMFMKFYSAHLFQNG---SVLVGELYSYGTLLNA 157

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 14/53 (26%), Positives = 20/53 (37%), Gaps = 10/53 (18%)

Query: 101 FGPVYRGL-LADGKVIEVKQ--LSSKSKQGNREIVNEIGMISALQHPNLVKLY 150
           FG V+R      G    VK+  L     +       E+   + L  P +V LY
Sbjct: 71  FGEVHRMKDKQTGFQCAVKKVRLEVFRVE-------ELVACAGLSSPRIVPLY 116

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 41.1 bits (96), Expect = 3e-04
 Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 10/84 (11%)

Query: 101 FGPVYRGLL------ADGKVIEVKQL-SSKSKQGNREIVNEIG-MISALQHPNLVKLYRL 152
           FG V           A  + + VK L    +   +R +++E+  +I    H N+V L   
Sbjct: 35  FGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 94

Query: 153 CTETLKQPIVYMAPEYAKHGYLTD 176
           CT+     +V +  E+ K G L+ 
Sbjct: 95  CTKPGGPLMVIV--EFCKFGNLST 116

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 18/113 (15%)

Query: 79  HLRQIKAATNNFASENEISER----------GFGPVYRGL-LADGKVIEVKQLSSKSKQG 127
           H     +   N   +   +ER           FG V +       +   VK ++ K+   
Sbjct: 3   HHHHHSSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVIN-KASAK 61

Query: 128 NRE---IVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDK 177
           N++   I+ E+ ++  L HPN++KL+ +  ++      Y+  E    G L D+
Sbjct: 62  NKDTSTILREVELLKKLDHPNIMKLFEILEDSSS---FYIVGELYTGGELFDE 111

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 16/89 (17%), Positives = 38/89 (42%), Gaps = 11/89 (12%)

Query: 100 GFGPVYRGL-LADGKVIEVKQLSSKSKQGNRE-IVNEIGMISALQHPNLVKLY------- 150
           GFG V+      D     +K++   +++  RE ++ E+  ++ L+HP +V+ +       
Sbjct: 17  GFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKN 76

Query: 151 --RLCTETLKQPIVYMAPEYAKHGYLTDK 177
                  +  +  +Y+  +  +   L D 
Sbjct: 77  TTEKLQPSSPKVYLYIQMQLCRKENLKDW 105

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 13/65 (20%), Positives = 29/65 (44%), Gaps = 3/65 (4%)

Query: 113 KVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHG 172
           K+++V + +S       ++  E  +   L+HP++V+L    +       +YM  E+    
Sbjct: 55  KIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGM---LYMVFEFMDGA 111

Query: 173 YLTDK 177
            L  +
Sbjct: 112 DLCFE 116

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 5/79 (6%)

Query: 100 GFGPVYRGLLADGKVIEVKQLSSKSKQG-NREIVNEIGMISALQHPNLVKLYRLCT-ETL 157
            FG V+RG    G+ + VK  SS+ ++   RE   EI     L+H N++        +  
Sbjct: 54  RFGEVWRGKW-RGEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADNKDNG 110

Query: 158 KQPIVYMAPEYAKHGYLTD 176
               +++  +Y +HG L D
Sbjct: 111 TWTQLWLVSDYHEHGSLFD 129

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 6/65 (9%)

Query: 113 KVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHG 172
           K+I+  QL+  S Q   ++  E+ ++  L HPN+VKL+ +  ET K   +Y+  EYA  G
Sbjct: 46  KIIDKTQLNPTSLQ---KLFREVRIMKILNHPNIVKLFEVI-ETEKT--LYLIMEYASGG 99

Query: 173 YLTDK 177
            + D 
Sbjct: 100 EVFDY 104

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 40.3 bits (95), Expect = 4e-04
 Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 7/82 (8%)

Query: 99  RG-FGPVYRGL-LADGKVIEVKQLSSKSKQGNREIV-NEIGMISALQHPNLVKLYRLCTE 155
           RG +G V   +          K++  K    + +    EI ++ +L HPN+++LY    E
Sbjct: 19  RGSWGEVKIAVQKGTRIRRAAKKIP-KYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF-E 76

Query: 156 TLKQPIVYMAPEYAKHGYLTDK 177
                 +Y+  E    G L ++
Sbjct: 77  DNTD--IYLVMELCTGGELFER 96

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 39.9 bits (94), Expect = 5e-04
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 7/66 (10%)

Query: 113 KVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQPI-VYMAPEYAKH 171
           KV+   QL  K    ++ +  EI + S L+HPN++++Y            +Y+  E+A  
Sbjct: 45  KVLFKSQLE-KEGVEHQ-LRREIEIQSHLRHPNILRMY----NYFHDRKRIYLMLEFAPR 98

Query: 172 GYLTDK 177
           G L  +
Sbjct: 99  GELYKE 104

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 39.6 bits (93), Expect = 7e-04
 Identities = 17/81 (20%), Positives = 33/81 (40%), Gaps = 7/81 (8%)

Query: 101 FGPVYRGL-LADGKVIEVKQ--LSSKSKQGNREIVNEIGMISAL-QHPNLVKLYRLCTET 156
           FG V++ +   DG +  +K+           +  + E+   + L QH ++V+ +    E 
Sbjct: 24  FGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAED 83

Query: 157 LKQPIVYMAPEYAKHGYLTDK 177
                + +  EY   G L D 
Sbjct: 84  DH---MLIQNEYCNGGSLADA 101

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 40.1 bits (94), Expect = 7e-04
 Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 15/86 (17%)

Query: 79  HLRQIKAATNNFASENEISER----------GFGPVYRGL-LADGKVIEVKQLSSKSKQG 127
           H     +   N   +   +ER           FG V +       +   VK ++ K+   
Sbjct: 3   HHHHHSSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVIN-KASAK 61

Query: 128 NRE---IVNEIGMISALQHPNLVKLY 150
           N++   I+ E+ ++  L HPN++KL+
Sbjct: 62  NKDTSTILREVELLKKLDHPNIMKLF 87

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 39.7 bits (93), Expect = 9e-04
 Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 7/68 (10%)

Query: 113 KVIEVKQLSSKSKQGNRE---IVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYA 169
           ++I  ++ +  S +       +  EI ++  L HP ++K+             Y+  E  
Sbjct: 166 RIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIK----NFFDAEDYYIVLELM 221

Query: 170 KHGYLTDK 177
           + G L DK
Sbjct: 222 EGGELFDK 229

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	307
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.97
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.97
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.97
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.97
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.97
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.97
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.97
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.97
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.96
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.96
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.96
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.96
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.95
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.95
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.95
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.94
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.94
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.94
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.94
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.94
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.94
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.93
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.93
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.93
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.93
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.93
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.93
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.93
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.93
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.93
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.93
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.93
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.93
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.93
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.93
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.93
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.93
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.93
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.93
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.93
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.93
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.92
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.92
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.92
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.92
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.92
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.92
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.92
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.92
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.92
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.92
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.92
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.92
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.92
3niz_A	311	Rhodanese family protein; structural genomics, str	99.92
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.92
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.92
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.92
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.92
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.92
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.92
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.92
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.92
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.92
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.92
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.92
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.92
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.92
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.92
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.92
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.92
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.92
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.92
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.92
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.92
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.92
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.92
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.92
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.92
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.92
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.92
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.92
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.92
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.92
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.92
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.92
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.92
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.92
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.92
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.91
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.91
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.91
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.91
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.91
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.91
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.91
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.91
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.91
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.91
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.91
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.91
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.91
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.91
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.91
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.91
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.91
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.91
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.91
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.91
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.91
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.91
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.91
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.91
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.91
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.91
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.91
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.91
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.91
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.91
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.91
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.91
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.91
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.91
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.91
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.91
3bhy_A	283	Death-associated protein kinase 3; death associate	99.91
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.91
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.91
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.91
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.91
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.91
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.91
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.91
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.91
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.91
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.91
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.91
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.9
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.9
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.9
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.9
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.9
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.9
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.9
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.9
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.9
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.9
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.9
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.9
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.9
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.9
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.9
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.9
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.9
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.9
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.9
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.9
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.9
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.9
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.9
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.9
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.9
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.9
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.9
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.9
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.9
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.9
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.9
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.9
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.9
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.9
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.9
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.9
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.9
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.9
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.9
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.9
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.9
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.9
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.9
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.9
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.9
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.9
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.9
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.9
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.9
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.9
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.89
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.89
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.89
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.89
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.89
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.89
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.89
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.89
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.89
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.89
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.89
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.89
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.89
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.89
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.89
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.89
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.89
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.89
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.89
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.89
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.89
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.89
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.89
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.89
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.88
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.88
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.88
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.88
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.88
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.88
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.88
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.88
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.88
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.88
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.88
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.88
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.88
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.88
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.88
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.88
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.88
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.88
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.87
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.87
3uqc_A	286	Probable conserved transmembrane protein; structur	99.87
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.87
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.87
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.86
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.86
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.86
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.85
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.85
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.85
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.84
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.83
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.83
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.81
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.78
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.66
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	98.86
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	98.57
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.24
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	97.67
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	97.09
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.71
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	95.54
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	93.29
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	93.16
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	90.68
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	88.67
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	84.77
3oja_A	487	Leucine-rich immune molecule 1; coiled-coil, helix	84.54
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	82.7
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	80.6

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=3.1e-35  Score=266.81  Aligned_cols=170  Identities=22%  Similarity=0.302  Sum_probs=138.5

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc------CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           88 NNFASENEISERGFGPVYRGLLA------DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      ++|...++||+|+||.||+|++.      +++.||||+++.......++|.+|+++|++++|||||+++|+|.+....  
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            56777889999999999999863      4788999999877777778899999999999999999999998764110  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~  200 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIG  200 (329)
T ss_dssp             EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEEC
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEc
Confidence                                                                                            


Q ss_pred             ----------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHH
Q 045092          160 ----------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYL  216 (307)
Q Consensus       160 ----------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~  216 (307)
                                            |+.|||||++.++.|+.++|||||||+||||+| |+.||.....      .+ +...+
T Consensus       201 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~------~~-~~~~i  273 (329)
T 4aoj_A          201 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN------TE-AIDCI  273 (329)
T ss_dssp             CCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH------HH-HHHHH
T ss_pred             ccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH------HH-HHHHH
Confidence                                  788999999999999999999999999999999 8999964322      11 11222


Q ss_pred             HhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccccc
Q 045092          217 KRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAEVC  271 (307)
Q Consensus       217 ~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~v~  271 (307)
                      ..+      ..+..+..++.++.+++..|| +.||++||||.||++.|+.+...+
T Consensus       274 ~~g------~~~~~p~~~~~~~~~li~~cl-~~dP~~RPs~~ei~~~L~~l~~~p  321 (329)
T 4aoj_A          274 TQG------RELERPRACPPEVYAIMRGCW-QREPQQRHSIKDVHARLQALAQAP  321 (329)
T ss_dssp             HHT------CCCCCCTTCCHHHHHHHHHHC-CSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred             HcC------CCCCCcccccHHHHHHHHHHc-CcChhHCcCHHHHHHHHHHHhhCC
Confidence            222      223445667789999999999 999999999999999998765443

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=4e-35  Score=262.61  Aligned_cols=168  Identities=23%  Similarity=0.336  Sum_probs=135.4

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc------CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-
Q 045092           87 TNNFASENEISERGFGPVYRGLLA------DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-  159 (307)
                      .++|.+.+.||+|+||.||+|.+.      ++..||||+++.......++|.+|+++|++++|||||+++|+|.+.... 
T Consensus        12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~   91 (299)
T 4asz_A           12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI   91 (299)
T ss_dssp             GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence            357788899999999999999853      4678999999877777778899999999999999999999999765211 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~D  171 (299)
T 4asz_A           92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGD  171 (299)
T ss_dssp             EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECC
T ss_pred             EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECC
Confidence                                                                                            


Q ss_pred             ---------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHH
Q 045092          160 ---------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLK  217 (307)
Q Consensus       160 ---------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~  217 (307)
                                           |+.|||||++.++.|+.++|||||||++|||+| |+.||.....      .+ +...+.
T Consensus       172 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~------~~-~~~~i~  244 (299)
T 4asz_A          172 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN------NE-VIECIT  244 (299)
T ss_dssp             CSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH------HH-HHHHHH
T ss_pred             cccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH------HH-HHHHHH
Confidence                                 788999999999999999999999999999999 8999964322      11 122222


Q ss_pred             hhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          218 RARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       218 ~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      .+.      .+..+..++.++.+++..|| +.||++||||.+|+..|++..
T Consensus       245 ~~~------~~~~p~~~~~~~~~li~~cl-~~dP~~RPs~~~i~~~L~~~~  288 (299)
T 4asz_A          245 QGR------VLQRPRTCPQEVYELMLGCW-QREPHMRKNIKGIHTLLQNLA  288 (299)
T ss_dssp             HTC------CCCCCTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             cCC------CCCCCccchHHHHHHHHHHc-CCChhHCcCHHHHHHHHHHHH
Confidence            222      23345567789999999999 999999999999999988754

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=9.7e-35  Score=261.18  Aligned_cols=168  Identities=24%  Similarity=0.292  Sum_probs=132.3

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc------CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-
Q 045092           88 NNFASENEISERGFGPVYRGLLA------DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-  159 (307)
                      ++++..+.||+|+||.||+|.+.      +++.||||+++... ....++|.+|+.++++++|||||+++|+|.+.... 
T Consensus        26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~  105 (308)
T 4gt4_A           26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS  105 (308)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence            34555688999999999999862      46789999997543 33457899999999999999999999998764211 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~K  185 (308)
T 4gt4_A          106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVK  185 (308)
T ss_dssp             EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEE
T ss_pred             EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEE
Confidence                                                                                            


Q ss_pred             ------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHH
Q 045092          160 ------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGS  214 (307)
Q Consensus       160 ------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~  214 (307)
                                              |+.|||||++.++.|+.++|||||||+||||+| |+.||.....   ..    +..
T Consensus       186 i~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~---~~----~~~  258 (308)
T 4gt4_A          186 ISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN---QD----VVE  258 (308)
T ss_dssp             ECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH---HH----HHH
T ss_pred             ECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH---HH----HHH
Confidence                                    778999999999999999999999999999999 8999964332   11    122


Q ss_pred             HHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          215 YLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       215 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                      .+..+.      .+..+..++..+.+++..|| +.||++||+|.+|++.|+...+
T Consensus       259 ~i~~~~------~~~~p~~~~~~~~~li~~C~-~~dP~~RPs~~ei~~~L~a~~n  306 (308)
T 4gt4_A          259 MIRNRQ------VLPCPDDCPAWVYALMIECW-NEFPSRRPRFKDIHSRLRAWGN  306 (308)
T ss_dssp             HHHTTC------CCCCCTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHTSCC
T ss_pred             HHHcCC------CCCCcccchHHHHHHHHHHc-CCChhHCcCHHHHHHHHHhccC
Confidence            222221      23345667789999999999 9999999999999999987543

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=3.5e-33  Score=250.52  Aligned_cols=170  Identities=21%  Similarity=0.288  Sum_probs=131.5

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      .++|...+.||+|+||.||+|.+.  ..||||+++..  .....+.|.+|+.+|++++|||||+++|+|.++...     
T Consensus        35 ~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iVmEy  112 (307)
T 3omv_A           35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQW  112 (307)
T ss_dssp             TTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEEEEEc
Confidence            456777899999999999999864  36999998743  344567899999999999999999999998764110     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       113 ~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~  192 (307)
T 3omv_A          113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVE  192 (307)
T ss_dssp             CSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-----------
T ss_pred             CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeec
Confidence                                                                                            


Q ss_pred             ----Cccccchhhhc---cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCch
Q 045092          160 ----PIVYMAPEYAK---HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGF  232 (307)
Q Consensus       160 ----t~~y~aPE~~~---~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  232 (307)
                          |+.|||||++.   .+.|+.++|||||||+||||+||+.||......      ..+...+..+.  .....+.++.
T Consensus       193 ~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~------~~~~~~~~~~~--~~p~~~~~~~  264 (307)
T 3omv_A          193 QPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR------DQIIFMVGRGY--ASPDLSKLYK  264 (307)
T ss_dssp             -CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH------HHHHHHHHTTC--CCCCSTTSCT
T ss_pred             ccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH------HHHHHHHhcCC--CCCCcccccc
Confidence                89999999986   356999999999999999999999999643221      11222222221  1112233455


Q ss_pred             hhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          233 KFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       233 ~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      .++..+.+++..|| +.||++||||.+|++.|+.+
T Consensus       265 ~~~~~l~~li~~cl-~~dP~~RPs~~ei~~~Le~l  298 (307)
T 3omv_A          265 NCPKAMKRLVADCV-KKVKEERPLFPQILSSIELL  298 (307)
T ss_dssp             TSCHHHHHHHHHHT-CSSSTTSCCHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHc-CCCHhHCcCHHHHHHHHHHH
Confidence            67779999999999 99999999999999888654

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.97  E-value=1.8e-32  Score=250.66  Aligned_cols=177  Identities=21%  Similarity=0.276  Sum_probs=140.3

Q ss_pred             ccHHHHHHHhcCcccCCcccCCCCeeEEEEEEc------CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCC-CCccce
Q 045092           78 FHLRQIKAATNNFASENEISERGFGPVYRGLLA------DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQH-PNLVKL  149 (307)
Q Consensus        78 ~~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h-~niv~l  149 (307)
                      +..++++...++|++.+.||+|+||.||+|.+.      +++.||||.++... ....+.|.+|+.+|.+++| ||||++
T Consensus        54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l  133 (353)
T 4ase_A           54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL  133 (353)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence            345667777889999999999999999999853      23579999997653 3345689999999999955 899999


Q ss_pred             eeeeecCCCC----------------------------------------------------------------------
Q 045092          150 YRLCTETLKQ----------------------------------------------------------------------  159 (307)
Q Consensus       150 ~g~~~~~~~~----------------------------------------------------------------------  159 (307)
                      +|+|.+....                                                                      
T Consensus       134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~  213 (353)
T 4ase_A          134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA  213 (353)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCc
Confidence            9998653110                                                                      


Q ss_pred             ------------------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCc
Q 045092          160 ------------------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTK  202 (307)
Q Consensus       160 ------------------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~  202 (307)
                                                          |+.|||||++.++.|+.++|||||||+||||+| |+.||.....
T Consensus       214 ~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~  293 (353)
T 4ase_A          214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI  293 (353)
T ss_dssp             GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred             cceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH
Confidence                                                788999999999999999999999999999998 9999964332


Q ss_pred             cCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          203 EDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       203 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      ..      .+...+..+      ..+..+..++.++.+++..|| +.||++||||.+|+++|+.+
T Consensus       294 ~~------~~~~~i~~g------~~~~~p~~~~~~~~~li~~c~-~~dP~~RPt~~eil~~L~~l  345 (353)
T 4ase_A          294 DE------EFCRRLKEG------TRMRAPDYTTPEMYQTMLDCW-HGEPSQRPTFSELVEHLGNL  345 (353)
T ss_dssp             SH------HHHHHHHHT------CCCCCCTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHH
T ss_pred             HH------HHHHHHHcC------CCCCCCccCCHHHHHHHHHHc-CcChhHCcCHHHHHHHHHHH
Confidence            11      122222222      234445567779999999999 99999999999999998765

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.97  E-value=1.1e-31  Score=244.47  Aligned_cols=162  Identities=16%  Similarity=0.280  Sum_probs=125.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      .++|.+.+.||+|+||.||+|+. .+|+.||||++...  .....+.|.+|+++|++++|||||++++++.+....    
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm  102 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM  102 (350)
T ss_dssp             CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence            36899999999999999999995 47999999998644  334456899999999999999999999988765211    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~  182 (350)
T 4b9d_A          103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA  182 (350)
T ss_dssp             ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHH
T ss_pred             eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCcccc
Confidence                                                                                            


Q ss_pred             -----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          160 -----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       160 -----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                           |+.|||||.+.+..|+.++|||||||++|||++|+.||....      ..+.+.... .+.      .+.++..+
T Consensus       183 ~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~------~~~~~~~i~-~~~------~~~~~~~~  249 (350)
T 4b9d_A          183 RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS------MKNLVLKII-SGS------FPPVSLHY  249 (350)
T ss_dssp             HHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHH-HTC------CCCCCTTS
T ss_pred             cccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHH-cCC------CCCCCccC
Confidence                 999999999999999999999999999999999999996432      122222221 111      23344566


Q ss_pred             HHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      +.++.+++..|+ +.||++|||+.|+++
T Consensus       250 s~~~~~li~~~L-~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          250 SYDLRSLVSQLF-KRNPRDRPSVNSILE  276 (350)
T ss_dssp             CHHHHHHHHHHT-CSSGGGSCCHHHHHT
T ss_pred             CHHHHHHHHHHc-cCChhHCcCHHHHhc
Confidence            778999999999 999999999999975

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.97  E-value=7.6e-32  Score=245.14  Aligned_cols=161  Identities=19%  Similarity=0.251  Sum_probs=129.5

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      ..|+..+.||+|+||.||+|.. .+|+.||||++........+.+.+|+.+|++++|||||++++++.+....       
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            4688899999999999999995 47999999999765555566789999999999999999999998765211       


Q ss_pred             -------------------------------------------------------------------------------C
Q 045092          160 -------------------------------------------------------------------------------P  160 (307)
Q Consensus       160 -------------------------------------------------------------------------------t  160 (307)
                                                                                                     |
T Consensus       154 ~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT  233 (346)
T 4fih_A          154 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGT  233 (346)
T ss_dssp             TTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSC
T ss_pred             CCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccccC
Confidence                                                                                           8


Q ss_pred             ccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC--chhhHHHH
Q 045092          161 IVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF--GFKFYRRT  238 (307)
Q Consensus       161 ~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~  238 (307)
                      +.|||||.+.+..|+.++|||||||++|||++|+.||.....      .+.+ ..+..      ...+.+  ...++.++
T Consensus       234 p~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~------~~~~-~~i~~------~~~~~~~~~~~~s~~~  300 (346)
T 4fih_A          234 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP------LKAM-KMIRD------NLPPRLKNLHKVSPSL  300 (346)
T ss_dssp             GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHH-HHHHH------SSCCCCSCGGGSCHHH
T ss_pred             cCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH------HHHH-HHHHc------CCCCCCCccccCCHHH
Confidence            999999999999999999999999999999999999964321      1111 11111      111222  23456689


Q ss_pred             HHHhccccCCCCCCCCCCHHHHHH
Q 045092          239 SDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .+++..|+ +.||++|||+.|+++
T Consensus       301 ~dli~~~L-~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          301 KGFLDRLL-VRDPAQRATAAELLK  323 (346)
T ss_dssp             HHHHHHHS-CSSTTTSCCHHHHTT
T ss_pred             HHHHHHHc-CCChhHCcCHHHHhc
Confidence            99999999 999999999999976

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.97  E-value=3.9e-31  Score=235.46  Aligned_cols=159  Identities=21%  Similarity=0.309  Sum_probs=121.3

Q ss_pred             ccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC---------
Q 045092           91 ASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK---------  158 (307)
Q Consensus        91 ~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~---------  158 (307)
                      ...++||+|+||.||+|.. .++..||||.+...  .....+.|.+|+.+|++++|||||++++++.+...         
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            4456899999999999995 47899999998643  33445679999999999999999999998754200         


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       109 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~~~  188 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK  188 (290)
T ss_dssp             ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBE
T ss_pred             eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCccC
Confidence                                                                                            


Q ss_pred             ---CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhH
Q 045092          159 ---QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFY  235 (307)
Q Consensus       159 ---~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  235 (307)
                         +|+.|||||++. +.|+.++|||||||++|||+||+.||.....  .   .. +...+..     ....+.++...+
T Consensus       189 ~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~~--~---~~-~~~~i~~-----~~~~~~~~~~~~  256 (290)
T 3fpq_A          189 AVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQN--A---AQ-IYRRVTS-----GVKPASFDKVAI  256 (290)
T ss_dssp             ESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS--H---HH-HHHHHTT-----TCCCGGGGGCCC
T ss_pred             CcccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCc--H---HH-HHHHHHc-----CCCCCCCCccCC
Confidence               099999999886 5699999999999999999999999953221  1   11 1111111     111222333445


Q ss_pred             HHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          236 RRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       236 ~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .++.+++..|+ +.||++|||+.|+++
T Consensus       257 ~~~~~li~~~L-~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          257 PEVKEIIEGCI-RQNKDERYSIKDLLN  282 (290)
T ss_dssp             HHHHHHHHHHS-CSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHHc-cCChhHCcCHHHHhc
Confidence            68899999999 999999999999976

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.97  E-value=8.7e-31  Score=231.43  Aligned_cols=160  Identities=19%  Similarity=0.227  Sum_probs=122.7

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      ++|++.+.||+|+||.||+|.. .+|+.||||++....   ....+.+.+|+++|++++|||||++++++.+....    
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            6899999999999999999994 579999999986432   23356799999999999999999999988765211    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        93 Ey~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~  172 (275)
T 3hyh_A           93 EYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC  172 (275)
T ss_dssp             ECCCEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC-------------
T ss_pred             eCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCccCCee
Confidence                                                                                            


Q ss_pred             -CccccchhhhccCCC-CchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHH
Q 045092          160 -PIVYMAPEYAKHGYL-TDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRR  237 (307)
Q Consensus       160 -t~~y~aPE~~~~~~~-~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  237 (307)
                       |+.|||||.+.+..+ +.++||||+||++|||++|+.||....      ... +...+..+.       +.++...+.+
T Consensus       173 GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~------~~~-~~~~i~~~~-------~~~p~~~s~~  238 (275)
T 3hyh_A          173 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES------IPV-LFKNISNGV-------YTLPKFLSPG  238 (275)
T ss_dssp             --CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHH-HHHHHHHTC-------CCCCTTSCHH
T ss_pred             ECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC------HHH-HHHHHHcCC-------CCCCCCCCHH
Confidence             999999999987765 579999999999999999999996422      111 112222221       2334456678


Q ss_pred             HHHHhccccCCCCCCCCCCHHHHHH
Q 045092          238 TSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       238 ~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      +.+++.+|+ +.||++|||+.|+++
T Consensus       239 ~~~li~~~L-~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          239 AAGLIKRML-IVNPLNRISIHEIMQ  262 (275)
T ss_dssp             HHHHHHHHS-CSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHc-cCChhHCcCHHHHHc
Confidence            999999999 999999999999986

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.97  E-value=4.7e-31  Score=245.67  Aligned_cols=161  Identities=19%  Similarity=0.251  Sum_probs=130.2

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      +.|+..+.||+|+||.||+|.. .+|+.||||++........+.+.+|+.+|++++|||||++++++.+....       
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~  230 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  230 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence            5699999999999999999995 47999999999766555567799999999999999999999998765211       


Q ss_pred             -------------------------------------------------------------------------------C
Q 045092          160 -------------------------------------------------------------------------------P  160 (307)
Q Consensus       160 -------------------------------------------------------------------------------t  160 (307)
                                                                                                     |
T Consensus       231 ~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT  310 (423)
T 4fie_A          231 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGT  310 (423)
T ss_dssp             TTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCEEC
T ss_pred             CCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccccccC
Confidence                                                                                           8


Q ss_pred             ccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC--chhhHHHH
Q 045092          161 IVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF--GFKFYRRT  238 (307)
Q Consensus       161 ~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~  238 (307)
                      +.|||||++.+..|+.++|||||||++|||++|+.||.....      .+.+ ..+..      ...+.+  ...++..+
T Consensus       311 p~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~------~~~~-~~i~~------~~~~~~~~~~~~s~~~  377 (423)
T 4fie_A          311 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP------LKAM-KMIRD------NLPPRLKNLHKVSPSL  377 (423)
T ss_dssp             TTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHH-HHHHH------SCCCCCSCTTSSCHHH
T ss_pred             cCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH------HHHH-HHHHc------CCCCCCcccccCCHHH
Confidence            999999999999999999999999999999999999964321      1111 11111      111222  23456689


Q ss_pred             HHHhccccCCCCCCCCCCHHHHHH
Q 045092          239 SDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .+++..|+ +.||++|||+.|+++
T Consensus       378 ~dli~~~L-~~dP~~R~ta~ell~  400 (423)
T 4fie_A          378 KGFLDRLL-VRDPAQRATAAELLK  400 (423)
T ss_dssp             HHHHHHHS-CSSTTTSCCHHHHTT
T ss_pred             HHHHHHHc-CCChhHCcCHHHHhc
Confidence            99999999 999999999999976

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.97  E-value=5e-31  Score=238.97  Aligned_cols=164  Identities=16%  Similarity=0.087  Sum_probs=129.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-------
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-------  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-------  158 (307)
                      .+.|...++||+|+||.||+|+. .+|+.||||+++....     ..+|+.+|.+++|||||++++++.+...       
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  131 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL  131 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            45688888999999999999995 4799999999965422     2469999999999999999999876511       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       132 ~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~  211 (336)
T 4g3f_A          132 LEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL  211 (336)
T ss_dssp             CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----------
T ss_pred             cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccccee
Confidence                                                                                            


Q ss_pred             ------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCch
Q 045092          159 ------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGF  232 (307)
Q Consensus       159 ------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  232 (307)
                            +|+.|||||++.+..|+.++|||||||++|||++|+.||........   ..   . +..+    ......++.
T Consensus       212 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~---~~---~-i~~~----~~~~~~~~~  280 (336)
T 4g3f_A          212 TGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL---CL---K-IASE----PPPIREIPP  280 (336)
T ss_dssp             --CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC---HH---H-HHHS----CCGGGGSCT
T ss_pred             cCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH---HH---H-HHcC----CCCchhcCc
Confidence                  18899999999999999999999999999999999999975443221   11   1 1111    111123445


Q ss_pred             hhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          233 KFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       233 ~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      .++..+.+++.+|+ +.||.+|||+.|+++.|...
T Consensus       281 ~~s~~~~~li~~~L-~~dP~~R~sa~el~~~l~~~  314 (336)
T 4g3f_A          281 SCAPLTAQAIQEGL-RKEPVHRASAMELRRKVGKA  314 (336)
T ss_dssp             TSCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHc-cCCHhHCcCHHHHHHHHHHH
Confidence            66778999999999 99999999999999887653

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.97  E-value=7.7e-31  Score=235.52  Aligned_cols=173  Identities=18%  Similarity=0.155  Sum_probs=123.8

Q ss_pred             cCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--------
Q 045092           88 NNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--------  159 (307)
                      ++|.+.+.||+|+||.||+|++ +|+.||||+++.... ....+.+|+..+.+++|||||+++|+|.+....        
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~   80 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS   80 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence            4577788999999999999997 589999999964322 122234456666788999999999998753210        


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        81 Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~  160 (303)
T 3hmm_A           81 DYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS  160 (303)
T ss_dssp             ECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEET
T ss_pred             cCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccC
Confidence                                                                                            


Q ss_pred             --------------CccccchhhhccC------CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCc--------ccHHHH
Q 045092          160 --------------PIVYMAPEYAKHG------YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDK--------FYLLDW  211 (307)
Q Consensus       160 --------------t~~y~aPE~~~~~------~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~--------~~l~~~  211 (307)
                                    |+.|||||++.+.      .++.++|||||||+||||+||+.|+........        ......
T Consensus       161 ~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~  240 (303)
T 3hmm_A          161 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEE  240 (303)
T ss_dssp             TTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHH
T ss_pred             CCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHH
Confidence                          8899999998754      467899999999999999999887643221110        001111


Q ss_pred             HHHHHHhhhhhcccccCCCchh-----hHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          212 LGSYLKRARKLNGASCSKFGFK-----FYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      +...+     .....+|.++..     ....+.+++.+|| +.||++||||.+|++.|+.+.
T Consensus       241 ~~~~~-----~~~~~rp~~p~~~~~~~~~~~l~~li~~cl-~~dP~~RPt~~ei~~~L~~l~  296 (303)
T 3hmm_A          241 MRKVV-----CEQKLRPNIPNRWQSCEALRVMAKIMRECW-YANGAARLTALRIKKTLSQLS  296 (303)
T ss_dssp             HHHHH-----TTSCCCCCCCGGGGSSHHHHHHHHHHHTTC-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHH-----hcccCCCCCCccccchHHHHHHHHHHHHHc-ccCHhHCcCHHHHHHHHHHHH
Confidence            11111     223344444432     3347889999999 999999999999999998754

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.96  E-value=9e-31  Score=234.75  Aligned_cols=159  Identities=18%  Similarity=0.227  Sum_probs=128.2

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      ++|++.+.||+|+||+||+|+. .+++.||||++...   .....+.+.+|+++|++++|||||++++++.+...     
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            5799999999999999999995 47999999998643   22345679999999999999999999999876521     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       112 Ey~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~  191 (311)
T 4aw0_A          112 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA  191 (311)
T ss_dssp             CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCB
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccc
Confidence                                                                                            


Q ss_pred             ----CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          159 ----QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       159 ----~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                          +|+.|||||.+.+..|+.++||||+||++|||++|+.||.....      .+ +...+..+.       ..++..+
T Consensus       192 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~------~~-~~~~i~~~~-------~~~p~~~  257 (311)
T 4aw0_A          192 NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE------GL-IFAKIIKLE-------YDFPEKF  257 (311)
T ss_dssp             CCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HH-HHHHHHHTC-------CCCCTTC
T ss_pred             cCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH------HH-HHHHHHcCC-------CCCCccc
Confidence                18999999999999999999999999999999999999964321      11 111222221       2344556


Q ss_pred             HHHHHHHhccccCCCCCCCCCCHHHHH
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPLMSFVV  261 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs~~~vl  261 (307)
                      +.++.+++..|+ +.||++||++.|++
T Consensus       258 s~~~~dli~~lL-~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          258 FPKARDLVEKLL-VLDATKRLGCEEME  283 (311)
T ss_dssp             CHHHHHHHHHHS-CSSGGGSTTSGGGT
T ss_pred             CHHHHHHHHHHc-cCCHhHCcChHHHc
Confidence            678999999999 99999999998863

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.96  E-value=4.2e-30  Score=231.73  Aligned_cols=192  Identities=30%  Similarity=0.467  Sum_probs=156.3

Q ss_pred             CcccHHHHHHHhcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeec
Q 045092           76 GSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTE  155 (307)
Q Consensus        76 ~~~~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~  155 (307)
                      .++++.++...+++|...+.||+|+||.||+|...+++.||||++........+.+.+|+.++.+++||||+++++++.+
T Consensus        27 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  106 (321)
T 2qkw_B           27 YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE  106 (321)
T ss_dssp             ---CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCC
T ss_pred             eeecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence            34566667778899999999999999999999987899999999877666667789999999999999999999998865


Q ss_pred             CCCC----------------------------------------------------------------------------
Q 045092          156 TLKQ----------------------------------------------------------------------------  159 (307)
Q Consensus       156 ~~~~----------------------------------------------------------------------------  159 (307)
                      ....                                                                            
T Consensus       107 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~  186 (321)
T 2qkw_B          107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGIS  186 (321)
T ss_dssp             TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTC
T ss_pred             CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccc
Confidence            4111                                                                            


Q ss_pred             -----------------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhh
Q 045092          160 -----------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKL  222 (307)
Q Consensus       160 -----------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  222 (307)
                                       |+.|+|||.+.++.++.++||||||+++|||++|+.||..........+..|.......+. +
T Consensus       187 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~  265 (321)
T 2qkw_B          187 KKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ-L  265 (321)
T ss_dssp             EECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTC-C
T ss_pred             cccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccccc-H
Confidence                             6679999999999999999999999999999999999987666666666666555444433 4


Q ss_pred             cccccCCC----chhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          223 NGASCSKF----GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       223 ~~~~~~~l----~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                      ....++.+    ....+..+.+++..|+ +.||++||++.++++.|+....
T Consensus       266 ~~~~~~~~~~~~~~~~~~~l~~li~~~l-~~dP~~Rps~~ell~~L~~~l~  315 (321)
T 2qkw_B          266 EQIVDPNLADKIRPESLRKFGDTAVKCL-ALSSEDRPSMGDVLWKLEYALR  315 (321)
T ss_dssp             CSSSSSSCTTCSCHHHHHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHhcChhhccccCHHHHHHHHHHHHHHc-CCCcccCcCHHHHHHHHHHHhh
Confidence            44444443    3455668999999999 9999999999999999987644

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.96  E-value=3.1e-30  Score=230.97  Aligned_cols=160  Identities=18%  Similarity=0.184  Sum_probs=120.6

Q ss_pred             cCcccCCcccCCCCeeEEEEEE----cCCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           88 NNFASENEISERGFGPVYRGLL----ADGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~----~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      ++|++.+.||+|+||.||+|+.    .+++.||||+++...  ......+.+|+++|.+++|||||++++++.+....  
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            5799999999999999999984    257899999986542  22344688999999999999999999998765211  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       104 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~  183 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA  183 (304)
T ss_dssp             EECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----CCC
T ss_pred             EEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCccc
Confidence                                                                                            


Q ss_pred             -----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          160 -----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       160 -----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                           |+.|||||.+.+..|+.++||||+||++|||++|+.||.....      .+.... +..+       .+.++..+
T Consensus       184 ~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~------~~~~~~-i~~~-------~~~~p~~~  249 (304)
T 3ubd_A          184 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR------KETMTM-ILKA-------KLGMPQFL  249 (304)
T ss_dssp             CSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHH-HHHC-------CCCCCTTS
T ss_pred             cccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH------HHHHHH-HHcC-------CCCCCCcC
Confidence                 8999999999999999999999999999999999999964322      111111 1111       12334556


Q ss_pred             HHHHHHHhccccCCCCCCCCCCH-----HHHHH
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPLM-----SFVVS  262 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs~-----~~vl~  262 (307)
                      +.++.+++.+|+ +.||++||++     +|+++
T Consensus       250 s~~~~~li~~~L-~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          250 SPEAQSLLRMLF-KRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             CHHHHHHHHHHT-CSSGGGSTTCSTTTHHHHHT
T ss_pred             CHHHHHHHHHHc-ccCHHHCCCCCcCCHHHHHc
Confidence            778999999999 9999999984     56654

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.96  E-value=5.7e-29  Score=222.81  Aligned_cols=159  Identities=17%  Similarity=0.279  Sum_probs=117.7

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-------
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-------  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-------  158 (307)
                      ++|+..+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|+++|++++|||||++++++.+...       
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            5689999999999999999995 478999999986443 3345679999999999999999999987643210       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGl  164 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL  164 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCcc
Confidence                                                                                            


Q ss_pred             ---------------------------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHH
Q 045092          159 ---------------------------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDW  211 (307)
Q Consensus       159 ---------------------------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~  211 (307)
                                                 +|+.|||||.+.+..|+.++|||||||++|||++   ||....     .....
T Consensus       165 a~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~-----~~~~~  236 (299)
T 4g31_A          165 VTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-----ERVRT  236 (299)
T ss_dssp             C--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-----HHHHH
T ss_pred             ceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-----HHHHH
Confidence                                       1788999999999999999999999999999996   663210     00110


Q ss_pred             HHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          212 LGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      + ..      +.....|...........+++..|+ +.||.+|||+.|+++
T Consensus       237 ~-~~------~~~~~~p~~~~~~~~~~~~li~~~L-~~dP~~Rps~~eil~  279 (299)
T 4g31_A          237 L-TD------VRNLKFPPLFTQKYPCEYVMVQDML-SPSPMERPEAINIIE  279 (299)
T ss_dssp             H-HH------HHTTCCCHHHHHHCHHHHHHHHHHT-CSSGGGSCCHHHHHT
T ss_pred             H-HH------HhcCCCCCCCcccCHHHHHHHHHHc-CCChhHCcCHHHHhc
Confidence            0 11      1111112222223346678999999 999999999999976

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.95  E-value=8.9e-29  Score=223.25  Aligned_cols=194  Identities=31%  Similarity=0.537  Sum_probs=151.5

Q ss_pred             CCcccHHHHHHHhcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCCh-hcHHHHHHHHHHHhhCCCCCccceeeee
Q 045092           75 TGSFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSK-QGNREIVNEIGMISALQHPNLVKLYRLC  153 (307)
Q Consensus        75 ~~~~~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~  153 (307)
                      ...|++.++...+++|...+.||+|+||.||+|...+++.||||++..... .....+.+|+.++.+++|+||+++++++
T Consensus        17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   96 (326)
T 3uim_A           17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC   96 (326)
T ss_dssp             CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred             cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence            357899999999999999999999999999999977899999999875432 2234789999999999999999999988


Q ss_pred             ecCCCC--------------------------------------------------------------------------
Q 045092          154 TETLKQ--------------------------------------------------------------------------  159 (307)
Q Consensus       154 ~~~~~~--------------------------------------------------------------------------  159 (307)
                      ......                                                                          
T Consensus        97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~  176 (326)
T 3uim_A           97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG  176 (326)
T ss_dssp             CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred             ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence            654111                                                                          


Q ss_pred             ---------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCC--ccCcccHHHHHHHHH
Q 045092          160 ---------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRT--KEDKFYLLDWLGSYL  216 (307)
Q Consensus       160 ---------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~--~~~~~~l~~~~~~~~  216 (307)
                                           |+.|+|||.+.++.++.++|||||||++|||++|+.||....  ......+.+|+....
T Consensus       177 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  256 (326)
T 3uim_A          177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL  256 (326)
T ss_dssp             CCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTT
T ss_pred             cCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHh
Confidence                                 778999999999999999999999999999999999995321  122334455544433


Q ss_pred             HhhhhhcccccCCC----chhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccccc
Q 045092          217 KRARKLNGASCSKF----GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAEV  270 (307)
Q Consensus       217 ~~~~~~~~~~~~~l----~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~v  270 (307)
                      .... .....+..+    .......+.+++..|+ +.||.+||++.+|+++|+.....
T Consensus       257 ~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl-~~dP~~Rps~~ell~~L~~~~~~  312 (326)
T 3uim_A          257 KEKK-LEALVDVDLQGNYKDEEVEQLIQVALLCT-QSSPMERPKMSEVVRMLEGDGLA  312 (326)
T ss_dssp             SSCC-STTSSCTTCTTSCCHHHHHHHHHHHHHHT-CSCGGGSCCHHHHHHHHHTSSCS
T ss_pred             hchh-hhhhcChhhccccCHHHHHHHHHHHHHHh-CcCCccCCCHHHHHHHhcCcchh
Confidence            3322 333333333    3344568999999999 99999999999999999875443

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.95  E-value=4e-28  Score=225.42  Aligned_cols=171  Identities=13%  Similarity=0.141  Sum_probs=123.9

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC------
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK------  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~------  158 (307)
                      ++|++.+.||+|+||.||+|.. .+|+.||||+++..  .....+.+.+|+++|++++|||||++++++.....      
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            5799999999999999999995 48999999999754  23345678999999999999999999987653210      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       134 ~~ivmE~~~g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~  213 (398)
T 4b99_A          134 VYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPA  213 (398)
T ss_dssp             EEEEEECCSEEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-----
T ss_pred             EEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccCcc
Confidence                                                                                            


Q ss_pred             ----------CCccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhh-------
Q 045092          159 ----------QPIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRAR-------  220 (307)
Q Consensus       159 ----------~t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~-------  220 (307)
                                +|+.|||||++.+. .++.++||||+||++|||++|+.||......+   ....+........       
T Consensus       214 ~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~---~l~~I~~~~g~p~~~~~~~~  290 (398)
T 4b99_A          214 EHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH---QLQLIMMVLGTPSPAVIQAV  290 (398)
T ss_dssp             --CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH---HHHHHHHHHCCCCGGGTC--
T ss_pred             ccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHH---HHHHHHHhcCCCChHHhhhh
Confidence                      08899999998764 57999999999999999999999996433211   1111111100000       


Q ss_pred             ------hhcccccCCC-------chhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          221 ------KLNGASCSKF-------GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       221 ------~~~~~~~~~l-------~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                            .......+..       ....+.++.+++.+|+ ..||.+|||+.|+++
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL-~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          291 GAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRML-RFEPSARISAAAALR  344 (398)
T ss_dssp             ---CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHS-CSSTTTSCCHHHHTT
T ss_pred             hhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHC-cCChhHCcCHHHHhc
Confidence                  0000000000       1123457889999999 999999999999986

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.95  E-value=7.1e-28  Score=233.70  Aligned_cols=165  Identities=18%  Similarity=0.181  Sum_probs=131.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-------
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-------  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-------  158 (307)
                      .++|++.+.||+|+||.||+|.. .+|+.||||.+........+.+.+|+.+|+.++|||||++++++.+...       
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~  235 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  235 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence            47899999999999999999995 4799999999977666666789999999999999999999998765411       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~~  315 (573)
T 3uto_A          236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV  315 (573)
T ss_dssp             CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEEE
T ss_pred             cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCceee
Confidence                                                                                            


Q ss_pred             --CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          159 --QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       159 --~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                        +|+.|||||.+.+..|+.++||||+||++|||++|+.||......      + ....+....   ..........++.
T Consensus       316 ~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~------~-~~~~i~~~~---~~~~~~~~~~~s~  385 (573)
T 3uto_A          316 TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD------E-TLRNVKSCD---WNMDDSAFSGISE  385 (573)
T ss_dssp             ECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH------H-HHHHHHTTC---CCCCSGGGTTSCH
T ss_pred             eEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH------H-HHHHHHhCC---CCCCcccccCCCH
Confidence              088999999999999999999999999999999999999643321      1 111111111   1112222234566


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .+.+|+..|+ +.||.+||++.|+++
T Consensus       386 ~~~dli~~~L-~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          386 DGKDFIRKLL-LADPNTRMTIHQALE  410 (573)
T ss_dssp             HHHHHHHTTS-CSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHc-cCChhHCcCHHHHhc
Confidence            8899999999 999999999999987

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.94  E-value=1.4e-26  Score=206.97  Aligned_cols=189  Identities=28%  Similarity=0.415  Sum_probs=144.1

Q ss_pred             CCcccHHHHHHHhcCcccC------CcccCCCCeeEEEEEEcCCCEEEEEEccCCC----hhcHHHHHHHHHHHhhCCCC
Q 045092           75 TGSFHLRQIKAATNNFASE------NEISERGFGPVYRGLLADGKVIEVKQLSSKS----KQGNREIVNEIGMISALQHP  144 (307)
Q Consensus        75 ~~~~~~~el~~~t~~f~~~------~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~h~  144 (307)
                      ...|++.++..++++|...      +.||+|+||.||+|.. +++.||||.+....    ....+.+.+|+.++.+++||
T Consensus        12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~   90 (307)
T 2nru_A           12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE   90 (307)
T ss_dssp             CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred             CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence            3579999999999999887      8899999999999986 58899999986432    23356799999999999999


Q ss_pred             CccceeeeeecCCCC-----------------------------------------------------------------
Q 045092          145 NLVKLYRLCTETLKQ-----------------------------------------------------------------  159 (307)
Q Consensus       145 niv~l~g~~~~~~~~-----------------------------------------------------------------  159 (307)
                      ||+++++++.+....                                                                 
T Consensus        91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~  170 (307)
T 2nru_A           91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAF  170 (307)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC
T ss_pred             CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCC
Confidence            999999988654211                                                                 


Q ss_pred             ---------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHH
Q 045092          160 ---------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWL  212 (307)
Q Consensus       160 ---------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~  212 (307)
                                                 |+.|+|||.+. +.++.++||||||+++|+|++|+.||........  +..+.
T Consensus       171 ~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~~  247 (307)
T 2nru_A          171 TAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQL--LLDIK  247 (307)
T ss_dssp             CEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHT-TEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB--TTHHH
T ss_pred             cEEEeecccccccccccccccccccCCCcCcCChHHhc-CCCCccchhHHHHHHHHHHHHCCCCcccCcchHH--HHHHH
Confidence                                       67899999876 4689999999999999999999999975443221  12221


Q ss_pred             HHHHHhhhhhcccccCC---CchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          213 GSYLKRARKLNGASCSK---FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       213 ~~~~~~~~~~~~~~~~~---l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      .........+...+++.   .....+..+.+++..|+ +.||.+||++.++++.|+.+.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl-~~~p~~Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          248 EEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCL-HEKKNKRPDIKKVQQLLQEMT  305 (307)
T ss_dssp             HHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHT-CSSTTTSCCHHHHHHHHHHHC
T ss_pred             HHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHc-CCCcccCcCHHHHHHHHHHHh
Confidence            11111111122223322   23445668999999999 999999999999999998753

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.94  E-value=5.8e-27  Score=211.64  Aligned_cols=179  Identities=21%  Similarity=0.272  Sum_probs=137.6

Q ss_pred             CCCCCCcccHHHHHHHhcC----------cccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHh
Q 045092           71 LDLPTGSFHLRQIKAATNN----------FASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMIS  139 (307)
Q Consensus        71 ~~~~~~~~~~~el~~~t~~----------f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~  139 (307)
                      .......|++++++.+++.          |+..+.||+|+||.||+|... +|+.||||++........+.+.+|+.++.
T Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~   97 (321)
T 2c30_A           18 LYFQSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMR   97 (321)
T ss_dssp             -------CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHT
T ss_pred             eeecCCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHH
Confidence            3344467899999988875          666779999999999999965 79999999997666566678999999999


Q ss_pred             hCCCCCccceeeeeecCCC-------------------------------------------------------------
Q 045092          140 ALQHPNLVKLYRLCTETLK-------------------------------------------------------------  158 (307)
Q Consensus       140 ~l~h~niv~l~g~~~~~~~-------------------------------------------------------------  158 (307)
                      +++|+||+++++++.....                                                             
T Consensus        98 ~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~  177 (321)
T 2c30_A           98 DYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLD  177 (321)
T ss_dssp             TCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT
T ss_pred             hCCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC
Confidence            9999999999998865411                                                             


Q ss_pred             -------------------------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHH
Q 045092          159 -------------------------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLG  213 (307)
Q Consensus       159 -------------------------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~  213 (307)
                                               +|+.|+|||++.++.++.++|||||||++|||++|+.||.....      .....
T Consensus       178 ~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~------~~~~~  251 (321)
T 2c30_A          178 GRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP------VQAMK  251 (321)
T ss_dssp             CCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHH
T ss_pred             CcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHH
Confidence                                     07789999999999999999999999999999999999964321      11111


Q ss_pred             HHHHhhhhhcccccCCC--chhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          214 SYLKRARKLNGASCSKF--GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       214 ~~~~~~~~~~~~~~~~l--~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                       .+.      ....+.+  ....+..+.+++..|+ +.||++||++.++++.
T Consensus       252 -~~~------~~~~~~~~~~~~~~~~l~~li~~~l-~~dp~~Rps~~ell~h  295 (321)
T 2c30_A          252 -RLR------DSPPPKLKNSHKVSPVLRDFLERML-VRDPQERATAQELLDH  295 (321)
T ss_dssp             -HHH------HSSCCCCTTGGGSCHHHHHHHHHHS-CSSTTTSCCHHHHHTS
T ss_pred             -HHh------cCCCCCcCccccCCHHHHHHHHHHc-cCChhhCcCHHHHhcC
Confidence             111      1111222  2345568899999999 9999999999999863

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.94  E-value=3.7e-27  Score=211.33  Aligned_cols=170  Identities=20%  Similarity=0.250  Sum_probs=134.0

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-------
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-------  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-------  158 (307)
                      .++|...+.||+|+||.||+|... +++.||+|.+........+.|.+|+.++.+++||||+++++++.+...       
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   88 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY   88 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence            467888999999999999999964 789999999877666777889999999999999999999998865410       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  168 (310)
T 3s95_A           89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL  168 (310)
T ss_dssp             CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC---------
T ss_pred             cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceeccccccccccc
Confidence                                                                                            


Q ss_pred             ---------------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhc
Q 045092          159 ---------------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLN  223 (307)
Q Consensus       159 ---------------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  223 (307)
                                     +|+.|+|||.+.+..++.++||||||+++|||++|..|+.............           ..
T Consensus       169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~-----------~~  237 (310)
T 3s95_A          169 RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN-----------VR  237 (310)
T ss_dssp             -----------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBC-----------HH
T ss_pred             ccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhh-----------hh
Confidence                           1455999999999999999999999999999999999986433222111000           00


Q ss_pred             ccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          224 GASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       224 ~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      ...+...+..++..+.+++..|+ +.||++||++.++++.|+.+.
T Consensus       238 ~~~~~~~~~~~~~~l~~li~~~l-~~dP~~Rps~~~l~~~L~~l~  281 (310)
T 3s95_A          238 GFLDRYCPPNCPPSFFPITVRCC-DLDPEKRPSFVKLEHWLETLR  281 (310)
T ss_dssp             HHHHHTCCTTCCTTHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccccccCCCCCCHHHHHHHHHHc-cCChhhCcCHHHHHHHHHHHH
Confidence            11111223345567899999999 999999999999999988754

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.94  E-value=4.2e-27  Score=222.46  Aligned_cols=175  Identities=24%  Similarity=0.309  Sum_probs=139.5

Q ss_pred             HHHHHHHhcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC
Q 045092           80 LRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ  159 (307)
Q Consensus        80 ~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  159 (307)
                      ..++....++|...+.||+|+||.||+|...++..||||.++... ...+.|.+|+.+|++++||||+++++++......
T Consensus       180 ~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~  258 (454)
T 1qcf_A          180 KDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIY  258 (454)
T ss_dssp             TTCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCE
T ss_pred             ccceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccE
Confidence            344555678899999999999999999998878899999997543 4567899999999999999999999988643100


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       259 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~  338 (454)
T 1qcf_A          259 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE  338 (454)
T ss_dssp             EEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH
T ss_pred             EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc
Confidence                                                                                            


Q ss_pred             ---------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC
Q 045092          160 ---------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK  229 (307)
Q Consensus       160 ---------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  229 (307)
                               |+.|+|||.+..+.++.++|||||||++|||++ |+.||.....      .+ +...+..+      ....
T Consensus       339 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~------~~-~~~~i~~~------~~~~  405 (454)
T 1qcf_A          339 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN------PE-VIRALERG------YRMP  405 (454)
T ss_dssp             HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH------HH-HHHHHHHT------CCCC
T ss_pred             eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH------HH-HHHHHHcC------CCCC
Confidence                     567999999999999999999999999999999 9999964321      11 11112211      1222


Q ss_pred             CchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          230 FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       230 l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                      .+..++..+.+++..|| +.||++||++.+|++.|++...
T Consensus       406 ~~~~~~~~l~~li~~cl-~~dp~~RPt~~~i~~~L~~~~~  444 (454)
T 1qcf_A          406 RPENCPEELYNIMMRCW-KNRPEERPTFEYIQSVLDDFYT  444 (454)
T ss_dssp             CCTTSCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHTSSS
T ss_pred             CCCCCCHHHHHHHHHHc-cCChhHCcCHHHHHHHHHHHHh
Confidence            34456778999999999 9999999999999999988643

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.94  E-value=9.4e-27  Score=207.92  Aligned_cols=164  Identities=18%  Similarity=0.228  Sum_probs=129.9

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-------
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-------  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-------  158 (307)
                      .++|...+.||+|+||.||+|.. .+++.||||.+........+.+.+|+.++.+++||||+++++++.....       
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            46799999999999999999994 5789999999876555556789999999999999999999998765411       


Q ss_pred             -------------------------------------------------------------------------------C
Q 045092          159 -------------------------------------------------------------------------------Q  159 (307)
Q Consensus       159 -------------------------------------------------------------------------------~  159 (307)
                                                                                                     +
T Consensus        99 ~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  178 (297)
T 3fxz_A           99 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG  178 (297)
T ss_dssp             CTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCS
T ss_pred             CCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCccC
Confidence                                                                                           0


Q ss_pred             CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHH
Q 045092          160 PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTS  239 (307)
Q Consensus       160 t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  239 (307)
                      |+.|+|||.+.+..++.++|||||||++|||++|+.||......      ..........     ......+..++..+.
T Consensus       179 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~~~~~~-----~~~~~~~~~~~~~~~  247 (297)
T 3fxz_A          179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL------RALYLIATNG-----TPELQNPEKLSAIFR  247 (297)
T ss_dssp             CGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHHC-----SCCCSCGGGSCHHHH
T ss_pred             CcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCC-----CCCCCCccccCHHHH
Confidence            78899999999999999999999999999999999999643211      1111111111     111222345666899


Q ss_pred             HHhccccCCCCCCCCCCHHHHHH
Q 045092          240 DGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       240 ~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      +++..|+ +.||.+||++.++++
T Consensus       248 ~li~~~l-~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          248 DFLNRCL-EMDVEKRGSAKELLQ  269 (297)
T ss_dssp             HHHHHHS-CSSTTTSCCHHHHTT
T ss_pred             HHHHHHc-cCChhHCcCHHHHhh
Confidence            9999999 999999999999976

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.94  E-value=3e-26  Score=205.88  Aligned_cols=176  Identities=18%  Similarity=0.270  Sum_probs=136.6

Q ss_pred             cHHHHHHHhcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecC
Q 045092           79 HLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTET  156 (307)
Q Consensus        79 ~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~  156 (307)
                      ...++....++|++.+.||+|+||.||+|.. +++.||||++....  ....+.+.+|+.++.+++|+||+++++++.+.
T Consensus        28 ~~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~  106 (309)
T 3p86_A           28 DGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP  106 (309)
T ss_dssp             ----CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred             CcccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC
Confidence            3334444467899999999999999999986 58899999987543  33456899999999999999999999988654


Q ss_pred             CCC-----------------------------------------------------------------------------
Q 045092          157 LKQ-----------------------------------------------------------------------------  159 (307)
Q Consensus       157 ~~~-----------------------------------------------------------------------------  159 (307)
                      ...                                                                             
T Consensus       107 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a  186 (309)
T 3p86_A          107 PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLS  186 (309)
T ss_dssp             TCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC--
T ss_pred             CceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCC
Confidence            211                                                                             


Q ss_pred             ---------------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcc
Q 045092          160 ---------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNG  224 (307)
Q Consensus       160 ---------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  224 (307)
                                     |+.|+|||.+.+..++.++|||||||++|||++|+.||.......   .   ... .     ...
T Consensus       187 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~---~---~~~-~-----~~~  254 (309)
T 3p86_A          187 RLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ---V---VAA-V-----GFK  254 (309)
T ss_dssp             ---------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH---H---HHH-H-----HHS
T ss_pred             ccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---H---HHH-H-----Hhc
Confidence                           788999999999999999999999999999999999996432211   1   111 1     111


Q ss_pred             cccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          225 ASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       225 ~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      .....++..++..+.+++..|+ +.||.+||++.++++.|+...
T Consensus       255 ~~~~~~~~~~~~~l~~li~~~l-~~dP~~Rps~~~ll~~L~~~~  297 (309)
T 3p86_A          255 CKRLEIPRNLNPQVAAIIEGCW-TNEPWKRPSFATIMDLLRPLI  297 (309)
T ss_dssp             CCCCCCCTTSCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCccCCHHHHHHHHHHc-cCChhhCcCHHHHHHHHHHHH
Confidence            2223445566778999999999 999999999999999998754

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.93  E-value=2.9e-26  Score=203.92  Aligned_cols=175  Identities=20%  Similarity=0.248  Sum_probs=134.2

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-----cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           87 TNNFASENEISERGFGPVYRGLL-----ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      .++|+..+.||+|+||.||+|.+     .+++.||||++........+.+.+|+.++.+++|+||+++++++......  
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   88 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence            36788899999999999999984     26789999999877666677899999999999999999999987432100  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  168 (295)
T 3ugc_A           89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK  168 (295)
T ss_dssp             EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC------
T ss_pred             EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCc
Confidence                                                                                            


Q ss_pred             -----------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCcc---------CcccHHHHHHHHHHhh
Q 045092          160 -----------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKE---------DKFYLLDWLGSYLKRA  219 (307)
Q Consensus       160 -----------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~---------~~~~l~~~~~~~~~~~  219 (307)
                                 +..|+|||.+.++.++.++||||||+++|||++|..|+......         ........+...+   
T Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  245 (295)
T 3ugc_A          169 EFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL---  245 (295)
T ss_dssp             -------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHH---
T ss_pred             ceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHH---
Confidence                       34599999999999999999999999999999999998532110         0000111111111   


Q ss_pred             hhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          220 RKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       220 ~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                         ........+..++..+.+++..|+ +.||++||++.++++.|+.+.
T Consensus       246 ---~~~~~~~~~~~~~~~l~~li~~~l-~~dp~~Rps~~el~~~L~~l~  290 (295)
T 3ugc_A          246 ---KNNGRLPRPDGCPDEIYMIMTECW-NNNVNQRPSFRDLALRVDQIR  290 (295)
T ss_dssp             ---HTTCCCCCCTTCCHHHHHHHHHHS-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             ---hccCcCCCCcCcCHHHHHHHHHHc-CCChhhCCCHHHHHHHHHHHH
Confidence               122223334566778999999999 999999999999999998754

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.93  E-value=1.8e-26  Score=208.76  Aligned_cols=168  Identities=22%  Similarity=0.299  Sum_probs=132.5

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc----CCCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           87 TNNFASENEISERGFGPVYRGLLA----DGKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      .++|.+.+.||+|+||.||+|...    .+..||||.++.. .....+.|.+|+.++.+++|+||+++++++.+....  
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  127 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI  127 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence            356888899999999999999963    3446999999764 344456899999999999999999999988764211  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  207 (325)
T 3kul_A          128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA  207 (325)
T ss_dssp             EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----C
T ss_pred             EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccc
Confidence                                                                                            


Q ss_pred             ---------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC
Q 045092          160 ---------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK  229 (307)
Q Consensus       160 ---------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  229 (307)
                               |+.|+|||.+.++.++.++|||||||++|||++ |+.||.......       +...      +.......
T Consensus       208 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-------~~~~------~~~~~~~~  274 (325)
T 3kul_A          208 AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD-------VISS------VEEGYRLP  274 (325)
T ss_dssp             CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH-------HHHH------HHTTCCCC
T ss_pred             eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH-------HHHH------HHcCCCCC
Confidence                     456999999998999999999999999999999 999995432211       1111      11222233


Q ss_pred             CchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          230 FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       230 l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      .+..++..+.+++..|+ +.||.+||++.+|++.|+...
T Consensus       275 ~~~~~~~~l~~li~~~l-~~dp~~Rps~~eil~~L~~l~  312 (325)
T 3kul_A          275 APMGCPHALHQLMLDCW-HKDRAQRPRFSQIVSVLDALI  312 (325)
T ss_dssp             CCTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCcCHHHHHHHHHHc-cCChhhCcCHHHHHHHHHHHH
Confidence            44566778999999999 999999999999999998754

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.93  E-value=2.3e-26  Score=201.89  Aligned_cols=167  Identities=22%  Similarity=0.344  Sum_probs=133.1

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      .++|...+.||+|+||.||+|...++..||||++.... ...+.+.+|+.++.+++||||+++++++.+....       
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   87 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM   87 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence            36788889999999999999998788899999997543 3446799999999999999999999998764211       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  167 (269)
T 4hcu_A           88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT  167 (269)
T ss_dssp             TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTST
T ss_pred             CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccccccccCc
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 --PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 --t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                        |+.|+|||.+.++.++.++||||||++++||++ |+.||......      + ....      +.....+..+...+.
T Consensus       168 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~------~-~~~~------~~~~~~~~~~~~~~~  234 (269)
T 4hcu_A          168 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS------E-VVED------ISTGFRLYKPRLAST  234 (269)
T ss_dssp             TCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------H-HHHH------HHTTCCCCCCTTSCH
T ss_pred             ccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH------H-HHHH------HhcCccCCCCCcCCH
Confidence              556999999999999999999999999999999 99999643221      1 1111      111222333344566


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      .+.+++..|+ +.||.+||++.++++.|+.+.
T Consensus       235 ~~~~li~~~l-~~~p~~Rps~~~ll~~l~~l~  265 (269)
T 4hcu_A          235 HVYQIMNHCW-RERPEDRPAFSRLLRQLAEIA  265 (269)
T ss_dssp             HHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHc-cCCcccCcCHHHHHHHHHHHH
Confidence            8999999999 999999999999999998753

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.93  E-value=6.3e-27  Score=216.02  Aligned_cols=170  Identities=22%  Similarity=0.352  Sum_probs=134.3

Q ss_pred             HHhcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           85 AATNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        85 ~~t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      ...++|...+.||+|+||.||+|... +++.||||.++... ......|.+|++++.+++||||++++|+|......   
T Consensus       111 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  190 (377)
T 3cbl_A          111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIV  190 (377)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             EchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEE
Confidence            34567888999999999999999975 78999999987543 23345789999999999999999999998764211   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       191 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~  270 (377)
T 3cbl_A          191 MELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAA  270 (377)
T ss_dssp             EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEEC
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceee
Confidence                                                                                            


Q ss_pred             -------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCc
Q 045092          160 -------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFG  231 (307)
Q Consensus       160 -------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~  231 (307)
                             ++.|+|||.+..+.++.++|||||||++|||++ |+.||.......       +...+..+      .....+
T Consensus       271 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~-------~~~~~~~~------~~~~~~  337 (377)
T 3cbl_A          271 SGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ-------TREFVEKG------GRLPCP  337 (377)
T ss_dssp             CSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH-------HHHHHHTT------CCCCCC
T ss_pred             cCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHcC------CCCCCC
Confidence                   345999999999999999999999999999999 999996432111       11222211      122334


Q ss_pred             hhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          232 FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       232 ~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      ..++..+.+++..|| +.||++||++.++++.|+.+.
T Consensus       338 ~~~~~~l~~li~~cl-~~dP~~Rps~~~i~~~L~~i~  373 (377)
T 3cbl_A          338 ELCPDAVFRLMEQCW-AYEPGQRPSFSTIYQELQSIR  373 (377)
T ss_dssp             TTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHc-CCCchhCcCHHHHHHHHHHHH
Confidence            456778999999999 999999999999999998754

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.93  E-value=3.7e-26  Score=215.75  Aligned_cols=165  Identities=23%  Similarity=0.310  Sum_probs=134.3

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           86 ATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      ..++|...+.||+|+||.||+|... ++.||||.++...  ..+.|.+|+.+|.+++|+||+++++++......      
T Consensus       191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e  267 (450)
T 1k9a_A          191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE  267 (450)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred             ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence            3567888999999999999999975 7899999997543  457899999999999999999999987654211      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~  347 (450)
T 1k9a_A          268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK  347 (450)
T ss_dssp             CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC------C
T ss_pred             ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCC
Confidence                                                                                            


Q ss_pred             -CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHH
Q 045092          160 -PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRR  237 (307)
Q Consensus       160 -t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  237 (307)
                       ++.|+|||.+.++.++.++|||||||++|||++ |+.||......+   +.    ..+..      ......+..++..
T Consensus       348 ~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---~~----~~i~~------~~~~~~p~~~~~~  414 (450)
T 1k9a_A          348 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VV----PRVEK------GYKMDAPDGCPPA  414 (450)
T ss_dssp             CCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT---HH----HHHHT------TCCCCCCTTCCHH
T ss_pred             CCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HH----HHHHc------CCCCCCCCcCCHH
Confidence             678999999999999999999999999999999 999996543322   11    11211      2223344567779


Q ss_pred             HHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          238 TSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       238 ~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      +.+++..|| +.||.+||++.++++.|+.+
T Consensus       415 l~~li~~cl-~~dp~~Rpt~~~l~~~L~~i  443 (450)
T 1k9a_A          415 VYDVMKNCW-HLDAATRPTFLQLREQLEHI  443 (450)
T ss_dssp             HHHHHHHHT-CSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHc-CCChhHCcCHHHHHHHHHHH
Confidence            999999999 99999999999999998865

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.93  E-value=4.4e-26  Score=209.97  Aligned_cols=169  Identities=22%  Similarity=0.333  Sum_probs=133.4

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc--------CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhC-CCCCccceeeeeecC
Q 045092           87 TNNFASENEISERGFGPVYRGLLA--------DGKVIEVKQLSSKS-KQGNREIVNEIGMISAL-QHPNLVKLYRLCTET  156 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~--------~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~  156 (307)
                      .++|...+.||+|+||.||+|...        ++..||||.++... ....+.+.+|+.++.++ +||||++++++|.+.
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            478899999999999999999842        34579999997543 34456899999999999 899999999987643


Q ss_pred             CCC-----------------------------------------------------------------------------
Q 045092          157 LKQ-----------------------------------------------------------------------------  159 (307)
Q Consensus       157 ~~~-----------------------------------------------------------------------------  159 (307)
                      ...                                                                             
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~  239 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN  239 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT
T ss_pred             CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCC
Confidence            100                                                                             


Q ss_pred             ----------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHH
Q 045092          160 ----------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLD  210 (307)
Q Consensus       160 ----------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~  210 (307)
                                                  |+.|+|||++.++.++.++|||||||++|||++ |+.||.......   +..
T Consensus       240 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~---~~~  316 (370)
T 2psq_A          240 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---LFK  316 (370)
T ss_dssp             CCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHH
T ss_pred             CCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHH
Confidence                                        467999999999999999999999999999999 999996433221   111


Q ss_pred             HHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          211 WLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                          .+      .....+..+..++..+.+++..|+ +.||.+||++.++++.|+.+..
T Consensus       317 ----~~------~~~~~~~~~~~~~~~l~~li~~~l-~~dP~~Rpt~~ell~~L~~il~  364 (370)
T 2psq_A          317 ----LL------KEGHRMDKPANCTNELYMMMRDCW-HAVPSQRPTFKQLVEDLDRILT  364 (370)
T ss_dssp             ----HH------HTTCCCCCCTTSCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ----HH------hcCCCCCCCCCCCHHHHHHHHHHc-CCChhhCcCHHHHHHHHHHHHH
Confidence                11      122223444566778999999999 9999999999999999987643

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.93  E-value=1.9e-26  Score=212.60  Aligned_cols=169  Identities=21%  Similarity=0.321  Sum_probs=130.8

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc----CCCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           87 TNNFASENEISERGFGPVYRGLLA----DGKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      .++|...+.||+|+||.||+|...    ++..||||.++.. .....+.|.+|+.++.+++|+||++++|++.+....  
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  123 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI  123 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence            457899999999999999999853    5678999999754 334456899999999999999999999998765211  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  203 (373)
T 2qol_A          124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA  203 (373)
T ss_dssp             EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred             EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCcc
Confidence                                                                                            


Q ss_pred             ---------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC
Q 045092          160 ---------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK  229 (307)
Q Consensus       160 ---------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  229 (307)
                               |+.|+|||++.++.++.++|||||||++|||++ |+.||......      + +...+..      .....
T Consensus       204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~------~-~~~~i~~------~~~~~  270 (373)
T 2qol_A          204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ------D-VIKAVDE------GYRLP  270 (373)
T ss_dssp             ----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH------H-HHHHHHT------TEECC
T ss_pred             ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH------H-HHHHHHc------CCCCC
Confidence                     456999999999999999999999999999998 99999643211      1 1111111      11222


Q ss_pred             CchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          230 FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       230 l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                      .+..++..+.+++..|+ +.||.+||++.+|++.|+....
T Consensus       271 ~~~~~~~~l~~li~~cl-~~dp~~RPs~~~i~~~L~~~~~  309 (373)
T 2qol_A          271 PPMDCPAALYQLMLDCW-QKDRNNRPKFEQIVSILDKLIR  309 (373)
T ss_dssp             CCTTCBHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCccccHHHHHHHHHHh-CcChhhCcCHHHHHHHHHHHHh
Confidence            23456678999999999 9999999999999999887643

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.93  E-value=2.1e-26  Score=201.59  Aligned_cols=168  Identities=18%  Similarity=0.256  Sum_probs=132.7

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      .++|...+.||+|+||.||+|... ++.||||.+...  .....+.|.+|+.++.+++||||+++++++.+....     
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI   87 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred             HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence            457888899999999999999974 889999998754  334456899999999999999999999998764110     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~~  167 (271)
T 3kmu_A           88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPG  167 (271)
T ss_dssp             EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCTT
T ss_pred             ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecccC
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccCCCCc---hhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchh
Q 045092          160 ---PIVYMAPEYAKHGYLTD---KAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFK  233 (307)
Q Consensus       160 ---t~~y~aPE~~~~~~~~~---~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  233 (307)
                         |+.|+|||.+.+..++.   ++||||||+++|||++|+.||.....      .+.....      ......+.++..
T Consensus       168 ~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~------~~~~~~~~~~~~  235 (271)
T 3kmu_A          168 RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN------MEIGMKV------ALEGLRPTIPPG  235 (271)
T ss_dssp             CBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH------HHHHHHH------HHSCCCCCCCTT
T ss_pred             ccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh------HHHHHHH------HhcCCCCCCCCC
Confidence               78899999998765444   89999999999999999999964321      1111111      222333445566


Q ss_pred             hHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          234 FYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       234 ~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      ++..+.+++..|+ +.||.+||++.++++.|+.+.
T Consensus       236 ~~~~~~~li~~~l-~~~p~~Rps~~~il~~L~~l~  269 (271)
T 3kmu_A          236 ISPHVSKLMKICM-NEDPAKRPKFDMIVPILEKMQ  269 (271)
T ss_dssp             CCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHc-CCChhhCcCHHHHHHHHHHhh
Confidence            7778999999999 999999999999999998754

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.93  E-value=2.3e-26  Score=208.10  Aligned_cols=169  Identities=22%  Similarity=0.362  Sum_probs=127.8

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCC----EEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGK----VIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~----~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-  159 (307)
                      .++|...+.||+|+||.||+|... +++    .||+|.+... .....+.|.+|+.++.+++|+||++++++|...... 
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   93 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL   93 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSEEE
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEE
Confidence            356888999999999999999953 444    3688888643 234567899999999999999999999998764110 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  173 (327)
T 3poz_A           94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE  173 (327)
T ss_dssp             EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-
T ss_pred             EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCccc
Confidence                                                                                            


Q ss_pred             --------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC
Q 045092          160 --------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF  230 (307)
Q Consensus       160 --------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l  230 (307)
                              |+.|+|||++.++.++.++|||||||++|||++ |+.||.......   +.    ..+..      ......
T Consensus       174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~----~~~~~------~~~~~~  240 (327)
T 3poz_A          174 YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---IS----SILEK------GERLPQ  240 (327)
T ss_dssp             ------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HH----HHHHT------TCCCCC
T ss_pred             ccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH---HH----HHHHc------CCCCCC
Confidence                    568999999999999999999999999999999 999996543222   11    11111      112223


Q ss_pred             chhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          231 GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       231 ~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                      +..++..+.+++..|+ +.||.+||++.++++.|+....
T Consensus       241 ~~~~~~~~~~li~~~l-~~~p~~Rps~~ell~~l~~~~~  278 (327)
T 3poz_A          241 PPICTIDVYMIMVKCW-MIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             CTTBCHHHHHHHHHHT-CSCGGGSCCHHHHHHHHHHHHT
T ss_pred             CccCCHHHHHHHHHHc-CCChhhCCCHHHHHHHHHHHHh
Confidence            3456668999999999 9999999999999999887654

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.93  E-value=4.1e-26  Score=200.08  Aligned_cols=168  Identities=23%  Similarity=0.279  Sum_probs=133.2

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      .++|...+.||+|+||.||+|...++..||||.+.... ...+.+.+|+.++.+++|+||+++++++.+....       
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI   85 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence            46788899999999999999998888889999997543 3446799999999999999999999988664211       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~  165 (268)
T 3sxs_A           86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGT  165 (268)
T ss_dssp             TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSC
T ss_pred             CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCC
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 --PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 --t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                        |+.|+|||.+.+..++.++||||||++++||++ |+.||.......      .. ..+      ........+...+.
T Consensus       166 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------~~-~~~------~~~~~~~~~~~~~~  232 (268)
T 3sxs_A          166 KFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE------VV-LKV------SQGHRLYRPHLASD  232 (268)
T ss_dssp             CCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH------HH-HHH------HTTCCCCCCTTSCH
T ss_pred             CcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH------HH-HHH------HcCCCCCCCCcChH
Confidence              456999999998889999999999999999999 999996433211      11 111      11112222334566


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                      .+.+++..|+ +.||.+||++.++++.|+...+
T Consensus       233 ~l~~li~~~l-~~~p~~Rps~~~ll~~L~~l~~  264 (268)
T 3sxs_A          233 TIYQIMYSCW-HELPEKRPTFQQLLSSIEPLRE  264 (268)
T ss_dssp             HHHHHHHHTT-CSSGGGSCCHHHHHHHHGGGCC
T ss_pred             HHHHHHHHHc-CCChhhCcCHHHHHHHHHHhhh
Confidence            8999999999 9999999999999999988654

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.93  E-value=4.2e-26  Score=201.52  Aligned_cols=168  Identities=20%  Similarity=0.281  Sum_probs=130.9

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      .++|...+.||+|+||.||++...++..||||++.... ...+.+.+|+.++.+++|+||+++++++.+....       
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  101 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM  101 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence            56788899999999999999998888899999997543 3346799999999999999999999988764211       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  181 (283)
T 3gen_A          102 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS  181 (283)
T ss_dssp             TTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTST
T ss_pred             CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccccccccccccCC
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 --PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 --t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                        |+.|+|||.+.++.++.++||||||+++|||++ |+.||......      . ....      +........+...+.
T Consensus       182 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~------~-~~~~------~~~~~~~~~~~~~~~  248 (283)
T 3gen_A          182 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS------E-TAEH------IAQGLRLYRPHLASE  248 (283)
T ss_dssp             TSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH------H-HHHH------HHTTCCCCCCTTCCH
T ss_pred             ccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh------H-HHHH------HhcccCCCCCCcCCH
Confidence              567999999999999999999999999999998 99999643221      1 1111      122222333344566


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                      .+.+++..|+ +.||.+||++.++++.|.+..+
T Consensus       249 ~l~~li~~~l-~~~p~~Rps~~~ll~~L~~~~~  280 (283)
T 3gen_A          249 KVYTIMYSCW-HEKADERPTFKILLSNILDVMD  280 (283)
T ss_dssp             HHHHHHHHTT-CSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHc-cCChhHCcCHHHHHHHHHHHhh
Confidence            8999999999 9999999999999999987543

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.93  E-value=5.3e-26  Score=217.22  Aligned_cols=172  Identities=21%  Similarity=0.336  Sum_probs=137.3

Q ss_pred             HHHHhcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           83 IKAATNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        83 l~~~t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      ++...++|...+.||+|+||.||+|... ++..||||.++... ...+.|.+|+.+|.+++|+||++++|+|......  
T Consensus       215 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l  293 (495)
T 1opk_A          215 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI  293 (495)
T ss_dssp             CBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             cccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence            3344567888999999999999999965 57899999997543 3467899999999999999999999998764211  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       294 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  373 (495)
T 1opk_A          294 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY  373 (495)
T ss_dssp             EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE
T ss_pred             EEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCce
Confidence                                                                                            


Q ss_pred             --------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC
Q 045092          160 --------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF  230 (307)
Q Consensus       160 --------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l  230 (307)
                              ++.|+|||.+..+.++.++|||||||++|||++ |+.||.......   +..    .+.      .......
T Consensus       374 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~---~~~----~~~------~~~~~~~  440 (495)
T 1opk_A          374 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYE----LLE------KDYRMER  440 (495)
T ss_dssp             ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHH----HHH------TTCCCCC
T ss_pred             eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH---HHH----HHH------cCCCCCC
Confidence                    467999999999999999999999999999999 999996443221   111    111      1122233


Q ss_pred             chhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          231 GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       231 ~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                      +..++..+.+++..|| +.||.+||++.+|++.|+....
T Consensus       441 ~~~~~~~l~~li~~cl-~~dP~~RPs~~el~~~L~~~~~  478 (495)
T 1opk_A          441 PEGCPEKVYELMRACW-QWNPSDRPSFAEIHQAFETMFQ  478 (495)
T ss_dssp             CTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHTSCS
T ss_pred             CCCCCHHHHHHHHHHc-CcChhHCcCHHHHHHHHHHHHh
Confidence            4566778999999999 9999999999999999988643

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.93  E-value=6.2e-26  Score=214.32  Aligned_cols=173  Identities=24%  Similarity=0.345  Sum_probs=137.2

Q ss_pred             HHHHHHhcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-
Q 045092           81 RQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-  159 (307)
Q Consensus        81 ~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-  159 (307)
                      ..+....++|...+.||+|+||.||+|....+..||||.++... ...+.|.+|+.+|++++||||+++++++.+.... 
T Consensus       177 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~i  255 (452)
T 1fmk_A          177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI  255 (452)
T ss_dssp             TCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred             cccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEE
Confidence            33444567788899999999999999998777889999997543 3456899999999999999999999988653100 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       256 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~  335 (452)
T 1fmk_A          256 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY  335 (452)
T ss_dssp             EECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred             EehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCce
Confidence                                                                                            


Q ss_pred             --------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC
Q 045092          160 --------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF  230 (307)
Q Consensus       160 --------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l  230 (307)
                              |+.|+|||.+..+.++.++|||||||++|||++ |+.||......      + +...+..      ......
T Consensus       336 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~------~-~~~~i~~------~~~~~~  402 (452)
T 1fmk_A          336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR------E-VLDQVER------GYRMPC  402 (452)
T ss_dssp             -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------H-HHHHHHT------TCCCCC
T ss_pred             ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH------H-HHHHHHc------CCCCCC
Confidence                    567999999999999999999999999999999 99999543211      1 1111111      122233


Q ss_pred             chhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          231 GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       231 ~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      +..++..+.+++..|| +.||++||++.++++.|+...
T Consensus       403 ~~~~~~~l~~li~~cl-~~dP~~Rpt~~~l~~~L~~~~  439 (452)
T 1fmk_A          403 PPECPESLHDLMCQCW-RKEPEERPTFEYLQAFLEDYF  439 (452)
T ss_dssp             CTTSCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHTTT
T ss_pred             CCCCCHHHHHHHHHHc-cCChhhCcCHHHHHHHHHHHh
Confidence            4566778999999999 999999999999999998864

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.93  E-value=8.7e-26  Score=202.49  Aligned_cols=170  Identities=22%  Similarity=0.359  Sum_probs=133.5

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCC---------
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETL---------  157 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~---------  157 (307)
                      .++|+..+.||+|+||.||+|... ++.||||.+...  ...+.|.+|+.++.+++||||++++|++.+..         
T Consensus         7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~lv~e~~~~   83 (307)
T 2eva_A            7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEG   83 (307)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTTTTEEEEECCTT
T ss_pred             HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcEEEEEcCCC
Confidence            356888899999999999999974 788999998643  34568999999999999999999999875430         


Q ss_pred             ----------------------------------------CC--------------------------------------
Q 045092          158 ----------------------------------------KQ--------------------------------------  159 (307)
Q Consensus       158 ----------------------------------------~~--------------------------------------  159 (307)
                                                              .+                                      
T Consensus        84 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~  163 (307)
T 2eva_A           84 GSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN  163 (307)
T ss_dssp             CBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-----------
T ss_pred             CCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccC
Confidence                                                    00                                      


Q ss_pred             --CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHH
Q 045092          160 --PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRR  237 (307)
Q Consensus       160 --t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  237 (307)
                        |+.|+|||.+.++.++.++||||||++++||++|+.||.......    ......       ......+.+...++..
T Consensus       164 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~~~~-------~~~~~~~~~~~~~~~~  232 (307)
T 2eva_A          164 KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA----FRIMWA-------VHNGTRPPLIKNLPKP  232 (307)
T ss_dssp             -CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH----HHHHHH-------HHTTCCCCCBTTCCHH
T ss_pred             CCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH----HHHHHH-------HhcCCCCCcccccCHH
Confidence              788999999999999999999999999999999999996432211    111111       1122233344556678


Q ss_pred             HHHHhccccCCCCCCCCCCHHHHHHHhccccccc
Q 045092          238 TSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAEVC  271 (307)
Q Consensus       238 ~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~v~  271 (307)
                      +.+++..|+ +.||.+||++.++++.|+......
T Consensus       233 l~~li~~~l-~~dp~~Rps~~ell~~L~~~~~~~  265 (307)
T 2eva_A          233 IESLMTRCW-SKDPSQRPSMEEIVKIMTHLMRYF  265 (307)
T ss_dssp             HHHHHHHHT-CSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred             HHHHHHHHh-cCChhhCcCHHHHHHHHHHHHHhc
Confidence            999999999 999999999999999998765443

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.93  E-value=7.6e-26  Score=208.11  Aligned_cols=170  Identities=22%  Similarity=0.343  Sum_probs=133.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc------CCCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC
Q 045092           87 TNNFASENEISERGFGPVYRGLLA------DGKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  159 (307)
                      .++|...+.||+|+||.||+|...      ++..||||+++.. .......+.+|+.++.+++|+||+++++++.+....
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  149 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  149 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            467888999999999999999942      4668999999654 344556799999999999999999999988664211


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG  229 (367)
T 3l9p_A          150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG  229 (367)
T ss_dssp             EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred             EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCc
Confidence                                                                                            


Q ss_pred             -------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhh
Q 045092          160 -------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRA  219 (307)
Q Consensus       160 -------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~  219 (307)
                                         |+.|+|||.+.++.++.++|||||||++|||++ |+.||......      + +...+.  
T Consensus       230 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~------~-~~~~i~--  300 (367)
T 3l9p_A          230 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ------E-VLEFVT--  300 (367)
T ss_dssp             HHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------H-HHHHHH--
T ss_pred             cccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH------H-HHHHHH--
Confidence                               567999999999999999999999999999998 99999643211      1 111111  


Q ss_pred             hhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccccc
Q 045092          220 RKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAEV  270 (307)
Q Consensus       220 ~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~v  270 (307)
                          ....+..+..++..+.+++..|+ +.||.+||++.+|++.|+....-
T Consensus       301 ----~~~~~~~~~~~~~~l~~li~~~l-~~dP~~Rps~~eil~~l~~~~~~  346 (367)
T 3l9p_A          301 ----SGGRMDPPKNCPGPVYRIMTQCW-QHQPEDRPNFAIILERIEYCTQD  346 (367)
T ss_dssp             ----TTCCCCCCTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             ----cCCCCCCCccCCHHHHHHHHHHc-CCCHhHCcCHHHHHHHHHHHhhC
Confidence                11123334456678999999999 99999999999999999876543

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.93  E-value=4.2e-26  Score=209.35  Aligned_cols=114  Identities=22%  Similarity=0.245  Sum_probs=94.9

Q ss_pred             HHHhcCcccCCcccCCCCeeEEEEEEc----CCCEEEEEEccCCChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC
Q 045092           84 KAATNNFASENEISERGFGPVYRGLLA----DGKVIEVKQLSSKSKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK  158 (307)
Q Consensus        84 ~~~t~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~  158 (307)
                      ....+.|++.+.||+|+||.||+|...    +++.||||.+....  ....+.+|+++|..+ +|||||++++++.+...
T Consensus        17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~   94 (361)
T 4f9c_A           17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH   94 (361)
T ss_dssp             GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred             CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence            344678999999999999999999842    46789999986543  345788999999998 79999999988765410


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        95 ~~lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~  174 (361)
T 4f9c_A           95 VVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIE  174 (361)
T ss_dssp             EEEEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCG
T ss_pred             EEEEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccc
Confidence                                                                                            


Q ss_pred             ---------------------------------CCccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcC
Q 045092          159 ---------------------------------QPIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVIC  199 (307)
Q Consensus       159 ---------------------------------~t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~  199 (307)
                                                       +|+.|||||.+.+. .|+.++||||+||++|||++|+.||..
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~  249 (361)
T 4f9c_A          175 LLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK  249 (361)
T ss_dssp             GGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred             ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence                                             27789999998775 589999999999999999999999953

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.93  E-value=5e-26  Score=221.61  Aligned_cols=164  Identities=22%  Similarity=0.226  Sum_probs=122.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHH---HHHHHHhhCCCCCccceeeeeecCCC-
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIV---NEIGMISALQHPNLVKLYRLCTETLK-  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~---~E~~~l~~l~h~niv~l~g~~~~~~~-  158 (307)
                      .++|++.+.||+|+||.||+|+. .+|+.||||++....   ......+.   .++.++..++|||||++++++.+... 
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l  267 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL  267 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence            36899999999999999999995 479999999986431   12223333   44677778899999999998876521 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       268 ylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~  347 (689)
T 3v5w_A          268 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP  347 (689)
T ss_dssp             EEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCCC
T ss_pred             EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCCCC
Confidence                                                                                            


Q ss_pred             ----CCccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchh
Q 045092          159 ----QPIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFK  233 (307)
Q Consensus       159 ----~t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  233 (307)
                          +|+.|||||++.++ .|+.++||||+||++|||++|+.||........   .. +......       ....++..
T Consensus       348 ~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~---~~-i~~~i~~-------~~~~~p~~  416 (689)
T 3v5w_A          348 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK---HE-IDRMTLT-------MAVELPDS  416 (689)
T ss_dssp             CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH---HH-HHHHHHH-------CCCCCCTT
T ss_pred             CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HH-HHHhhcC-------CCCCCCcc
Confidence                19999999999754 699999999999999999999999964433221   11 1111111       12334456


Q ss_pred             hHHHHHHHhccccCCCCCCCCCC-----HHHHHH
Q 045092          234 FYRRTSDGNDQCSSSVTPTNRPL-----MSFVVS  262 (307)
Q Consensus       234 ~~~~~~~l~~~C~~~~dP~~RPs-----~~~vl~  262 (307)
                      ++.++.+++..|+ +.||.+|++     +.+|++
T Consensus       417 ~S~~a~dLI~~lL-~~dP~~Rl~~~~~ga~ei~~  449 (689)
T 3v5w_A          417 FSPELRSLLEGLL-QRDVNRRLGCLGRGAQEVKE  449 (689)
T ss_dssp             SCHHHHHHHHHHT-CSCGGGCTTCSSSTHHHHTT
T ss_pred             CCHHHHHHHHHHc-cCCHhHCCCCCCCCHHHHhc
Confidence            6778999999999 999999998     577754

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.93  E-value=1.1e-25  Score=204.20  Aligned_cols=162  Identities=17%  Similarity=0.277  Sum_probs=128.1

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      .++|...+.||+|+||.||+|.. .+|+.||||++...  .....+.+.+|+.+++.++||||+++++++......    
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            56899999999999999999995 58999999998643  334456789999999999999999999988654110    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        94 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  173 (328)
T 3fe3_A           94 EYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAF  173 (328)
T ss_dssp             CCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGTT
T ss_pred             ECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCccccc
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCCCC-chhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 --PIVYMAPEYAKHGYLT-DKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 --t~~y~aPE~~~~~~~~-~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                        |+.|+|||.+.+..++ .++|||||||+++||++|+.||.....      .. +...+..+.       ..++...+.
T Consensus       174 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~-~~~~i~~~~-------~~~p~~~s~  239 (328)
T 3fe3_A          174 CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL------KE-LRERVLRGK-------YRIPFYMST  239 (328)
T ss_dssp             SSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH------HH-HHHHHHHCC-------CCCCTTSCH
T ss_pred             cCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH------HH-HHHHHHhCC-------CCCCCCCCH
Confidence              7889999999888775 789999999999999999999964321      11 111222211       223344566


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .+.+++..|+ ..||.+|||+.|+++.
T Consensus       240 ~~~~li~~~L-~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          240 DCENLLKRFL-VLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             HHHHHHHHHC-CSSTTTSCCHHHHTTC
T ss_pred             HHHHHHHHHC-CCChhHCcCHHHHhcC
Confidence            8899999999 9999999999999763

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.93  E-value=1.1e-25  Score=199.17  Aligned_cols=169  Identities=27%  Similarity=0.399  Sum_probs=131.4

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhc-------HHHHHHHHHHHhhCCCCCccceeeeeecCCC
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQG-------NREIVNEIGMISALQHPNLVKLYRLCTETLK  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~-------~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  158 (307)
                      .++|...+.||+|+||.||+|.. .+++.||||.+.......       .+.+.+|+.++.+++|+||+++++++.+...
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   97 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR   97 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTTE
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCCe
Confidence            46788899999999999999996 478999999986443221       2678999999999999999999998754310


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        98 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~  177 (287)
T 4f0f_A           98 MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ  177 (287)
T ss_dssp             EEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCB
T ss_pred             EEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccc
Confidence                                                                                            


Q ss_pred             ----------CCccccchhhhc--cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccc
Q 045092          159 ----------QPIVYMAPEYAK--HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGAS  226 (307)
Q Consensus       159 ----------~t~~y~aPE~~~--~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  226 (307)
                                +|+.|+|||.+.  ...++.++|||||||++|||++|+.||........    ......      .....
T Consensus       178 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~----~~~~~~------~~~~~  247 (287)
T 4f0f_A          178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI----KFINMI------REEGL  247 (287)
T ss_dssp             CCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH----HHHHHH------HHSCC
T ss_pred             cccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH----HHHHHH------hccCC
Confidence                      077899999983  45678999999999999999999999964332221    111111      12223


Q ss_pred             cCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          227 CSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       227 ~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      .+.++..++..+.+++..|+ +.||.+||++.++++.|++
T Consensus       248 ~~~~~~~~~~~l~~li~~~l-~~dp~~Rps~~~ll~~L~~  286 (287)
T 4f0f_A          248 RPTIPEDCPPRLRNVIELCW-SGDPKKRPHFSYIVKELSE  286 (287)
T ss_dssp             CCCCCTTSCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHT
T ss_pred             CCCCCcccCHHHHHHHHHHh-cCChhhCcCHHHHHHHHHh
Confidence            34455667778999999999 9999999999999999875

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.93  E-value=1.5e-25  Score=196.61  Aligned_cols=166  Identities=20%  Similarity=0.301  Sum_probs=129.1

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCCh----hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSK----QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      .++|...+.||+|+||.||+|.. .+..||||.+.....    ...+.+.+|+.++..++|+||+++++++.+....   
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV   84 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence            46788899999999999999997 488999999865422    2346799999999999999999999988654110   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~  164 (271)
T 3dtc_A           85 MEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR  164 (271)
T ss_dssp             EECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--
T ss_pred             EEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccc
Confidence                                                                                            


Q ss_pred             ------------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhccccc
Q 045092          160 ------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC  227 (307)
Q Consensus       160 ------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  227 (307)
                                  |+.|+|||.+.+..++.++||||||++++||++|+.||.......      ... ..     ......
T Consensus       165 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~-~~-----~~~~~~  232 (271)
T 3dtc_A          165 EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA------VAY-GV-----AMNKLA  232 (271)
T ss_dssp             -----------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH------HHH-HH-----HTSCCC
T ss_pred             ccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHH-hh-----hcCCCC
Confidence                        678999999999999999999999999999999999996432111      011 11     112223


Q ss_pred             CCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          228 SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       228 ~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      ...+..++..+.+++..|+ +.||.+||++.++++.|+.
T Consensus       233 ~~~~~~~~~~~~~li~~~l-~~~p~~Rps~~e~l~~L~~  270 (271)
T 3dtc_A          233 LPIPSTCPEPFAKLMEDCW-NPDPHSRPSFTNILDQLTT  270 (271)
T ss_dssp             CCCCTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHC
T ss_pred             CCCCcccCHHHHHHHHHHh-cCCcccCcCHHHHHHHHhc
Confidence            3344566778999999999 9999999999999999975

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.92  E-value=5.3e-26  Score=207.60  Aligned_cols=179  Identities=22%  Similarity=0.281  Sum_probs=139.9

Q ss_pred             cccHHHHHHHhcCcccCCcccCCCCeeEEEEEE------cCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhC-CCCCccc
Q 045092           77 SFHLRQIKAATNNFASENEISERGFGPVYRGLL------ADGKVIEVKQLSSKS-KQGNREIVNEIGMISAL-QHPNLVK  148 (307)
Q Consensus        77 ~~~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~  148 (307)
                      .+...++....++|...+.||+|+||.||+|..      .+++.||||+++... ....+.+.+|++++.++ +||||++
T Consensus        11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~   90 (359)
T 3vhe_A           11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN   90 (359)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence            356777777889999999999999999999983      245789999997643 33456799999999999 8999999


Q ss_pred             eeeeeecCCC----------------------------------------------------------------------
Q 045092          149 LYRLCTETLK----------------------------------------------------------------------  158 (307)
Q Consensus       149 l~g~~~~~~~----------------------------------------------------------------------  158 (307)
                      +++++.+...                                                                      
T Consensus        91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (359)
T 3vhe_A           91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE  170 (359)
T ss_dssp             EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred             eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence            9988654200                                                                      


Q ss_pred             -------------------C------------------------------------------------------------
Q 045092          159 -------------------Q------------------------------------------------------------  159 (307)
Q Consensus       159 -------------------~------------------------------------------------------------  159 (307)
                                         .                                                            
T Consensus       171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  250 (359)
T 3vhe_A          171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV  250 (359)
T ss_dssp             -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCE
T ss_pred             cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccch
Confidence                               0                                                            


Q ss_pred             -------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCc
Q 045092          160 -------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFG  231 (307)
Q Consensus       160 -------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~  231 (307)
                             |+.|+|||++.++.++.++|||||||++|||++ |+.||.......      .+...+..      ......+
T Consensus       251 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~~~~~~------~~~~~~~  318 (359)
T 3vhe_A          251 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCRRLKE------GTRMRAP  318 (359)
T ss_dssp             EC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH------HHHHHHHH------TCCCCCC
T ss_pred             hccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH------HHHHHHHc------CCCCCCC
Confidence                   567999999999999999999999999999998 999996433211      11122221      1223334


Q ss_pred             hhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          232 FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       232 ~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      ..++..+.+++..|+ +.||.+||++.+++++|+...
T Consensus       319 ~~~~~~l~~li~~~l-~~dP~~Rps~~ell~~L~~~~  354 (359)
T 3vhe_A          319 DYTTPEMYQTMLDCW-HGEPSQRPTFSELVEHLGNLL  354 (359)
T ss_dssp             TTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHc-cCChhhCCCHHHHHHHHHHHH
Confidence            456678999999999 999999999999999998753

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.92  E-value=1e-25  Score=204.29  Aligned_cols=178  Identities=21%  Similarity=0.311  Sum_probs=137.3

Q ss_pred             HHHHHHhcCcccCCcccCCCCeeEEEEEEc------CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeee
Q 045092           81 RQIKAATNNFASENEISERGFGPVYRGLLA------DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLC  153 (307)
Q Consensus        81 ~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~  153 (307)
                      ..+....++|...+.||+|+||.||+|...      +++.||||.++... ....+.|.+|+.++.+++|+||+++++++
T Consensus        40 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~  119 (343)
T 1luf_A           40 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC  119 (343)
T ss_dssp             HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             ceeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            344455688999999999999999999963      34789999997543 33456899999999999999999999987


Q ss_pred             ecCCC--------------------------------------------C------------------------------
Q 045092          154 TETLK--------------------------------------------Q------------------------------  159 (307)
Q Consensus       154 ~~~~~--------------------------------------------~------------------------------  159 (307)
                      .+...                                            .                              
T Consensus       120 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~D  199 (343)
T 1luf_A          120 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD  199 (343)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            54310                                            0                              


Q ss_pred             ---------------------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcC
Q 045092          160 ---------------------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVIC  199 (307)
Q Consensus       160 ---------------------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~  199 (307)
                                                             |+.|+|||.+.++.++.++||||||+++|||++ |+.||..
T Consensus       200 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~  279 (343)
T 1luf_A          200 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG  279 (343)
T ss_dssp             CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             CCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence                                                   567999999999999999999999999999999 9999964


Q ss_pred             CCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccccccc
Q 045092          200 RTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAEVCS  272 (307)
Q Consensus       200 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~v~~  272 (307)
                      ...      .+ +...+..+      ..+..+..++..+.+++..|+ +.||.+||++.++++.|+...+-+.
T Consensus       280 ~~~------~~-~~~~~~~~------~~~~~~~~~~~~l~~li~~~l-~~~p~~Rps~~~~~~~L~~~~~~~~  338 (343)
T 1luf_A          280 MAH------EE-VIYYVRDG------NILACPENCPLELYNLMRLCW-SKLPADRPSFCSIHRILQRMCERAE  338 (343)
T ss_dssp             SCH------HH-HHHHHHTT------CCCCCCTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHTTC---
T ss_pred             CCh------HH-HHHHHhCC------CcCCCCCCCCHHHHHHHHHHc-ccCcccCCCHHHHHHHHHHHHhhhh
Confidence            321      11 11122221      122334556778999999999 9999999999999999998765443

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.92  E-value=1.7e-25  Score=195.78  Aligned_cols=167  Identities=22%  Similarity=0.337  Sum_probs=132.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      .++|...+.||+|+||.||++...++..||+|.+.... ...+.+.+|+.++.+++||||+++++++.+....       
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM   85 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred             hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence            46788889999999999999998788899999997543 2346899999999999999999999998764211       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~  165 (267)
T 3t9t_A           86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT  165 (267)
T ss_dssp             TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTST
T ss_pred             CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEcccccccccccccccccccc
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 --PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 --t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                        +..|+|||.+.++.++.++||||||++++||++ |+.||.....      .. ....+.      ....+..+...+.
T Consensus       166 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~-~~~~i~------~~~~~~~~~~~~~  232 (267)
T 3t9t_A          166 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN------SE-VVEDIS------TGFRLYKPRLAST  232 (267)
T ss_dssp             TCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HH-HHHHHH------TTCCCCCCTTSCH
T ss_pred             cccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH------HH-HHHHHh------cCCcCCCCccCcH
Confidence              457999999998999999999999999999999 8999864321      11 111111      1112223344566


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      .+.+++..|+ +.||.+||++.++++.|+.+.
T Consensus       233 ~l~~li~~~l-~~~p~~Rps~~~ll~~L~~l~  263 (267)
T 3t9t_A          233 HVYQIMNHCW-RERPEDRPAFSRLLRQLAEIA  263 (267)
T ss_dssp             HHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHc-cCChhhCcCHHHHHHHHHHHH
Confidence            8999999999 999999999999999998753

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.92  E-value=2.2e-25  Score=196.86  Aligned_cols=168  Identities=22%  Similarity=0.327  Sum_probs=131.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcC----CCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           87 TNNFASENEISERGFGPVYRGLLAD----GKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~----~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      .++|...+.||+|+||.||+|....    +..||||.+... .....+.+.+|+.++.+++||||+++++++.+....  
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v   90 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWII   90 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCEEE
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCEEE
Confidence            5678889999999999999998532    236999998754 334567899999999999999999999987654110  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        91 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  170 (281)
T 3cc6_A           91 MELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYK  170 (281)
T ss_dssp             EECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-------
T ss_pred             EecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcccccccccc
Confidence                                                                                            


Q ss_pred             ------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCch
Q 045092          160 ------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGF  232 (307)
Q Consensus       160 ------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  232 (307)
                            |+.|+|||.+.++.++.++||||||+++|||++ |+.||.......   +..    .+..+      .....+.
T Consensus       171 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~---~~~----~~~~~------~~~~~~~  237 (281)
T 3cc6_A          171 ASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD---VIG----VLEKG------DRLPKPD  237 (281)
T ss_dssp             --CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG---HHH----HHHHT------CCCCCCT
T ss_pred             cccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH---HHH----HHhcC------CCCCCCC
Confidence                  557999999998999999999999999999998 999996433222   111    11111      1122334


Q ss_pred             hhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          233 KFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       233 ~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      .++..+.+++..|+ ..||.+||++.++++.|+...
T Consensus       238 ~~~~~l~~li~~~l-~~~p~~Rps~~ell~~L~~~~  272 (281)
T 3cc6_A          238 LCPPVLYTLMTRCW-DYDPSDRPRFTELVCSLSDVY  272 (281)
T ss_dssp             TCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHc-cCCchhCcCHHHHHHHHHHHH
Confidence            46678999999999 999999999999999998754

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.92  E-value=7.1e-26  Score=203.96  Aligned_cols=174  Identities=21%  Similarity=0.328  Sum_probs=129.1

Q ss_pred             HHHHHhcCcccCCcccCCCCeeEEEEEEc-CC---CEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeec
Q 045092           82 QIKAATNNFASENEISERGFGPVYRGLLA-DG---KVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTE  155 (307)
Q Consensus        82 el~~~t~~f~~~~~lG~G~~g~Vy~~~~~-~~---~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~  155 (307)
                      ++....++|...+.||+|+||.||+|... ++   ..||||.++..  .....+.+.+|+.++++++|+||+++++++..
T Consensus        17 ~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   96 (323)
T 3qup_A           17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLR   96 (323)
T ss_dssp             TTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEEC
T ss_pred             hcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeec
Confidence            33444678999999999999999999954 33   27999998754  33456789999999999999999999997644


Q ss_pred             CCC----------------------------------C------------------------------------------
Q 045092          156 TLK----------------------------------Q------------------------------------------  159 (307)
Q Consensus       156 ~~~----------------------------------~------------------------------------------  159 (307)
                      ...                                  .                                          
T Consensus        97 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~  176 (323)
T 3qup_A           97 SRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTV  176 (323)
T ss_dssp             C-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCE
T ss_pred             cccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCE
Confidence            210                                  0                                          


Q ss_pred             -------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHH
Q 045092          160 -------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLG  213 (307)
Q Consensus       160 -------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~  213 (307)
                                               ++.|+|||.+.+..++.++|||||||++|||++ |+.||.......   +..   
T Consensus       177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~~---  250 (323)
T 3qup_A          177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE---IYN---  250 (323)
T ss_dssp             EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHH---
T ss_pred             EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH---HHH---
Confidence                                     557999999999999999999999999999999 999996433222   111   


Q ss_pred             HHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          214 SYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       214 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                       .+      ........+..++..+.+++..|+ +.||.+||++.++++.|+.+..
T Consensus       251 -~~------~~~~~~~~~~~~~~~l~~li~~~l-~~dp~~Rps~~~l~~~l~~~l~  298 (323)
T 3qup_A          251 -YL------IGGNRLKQPPECMEEVYDLMYQCW-SADPKQRPSFTCLRMELENILG  298 (323)
T ss_dssp             -HH------HTTCCCCCCTTCCHHHHHHHHHTT-CSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -HH------hcCCCCCCCCccCHHHHHHHHHHc-cCChhhCcCHHHHHHHHHHHHH
Confidence             11      111122334456678999999999 9999999999999999988654

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.92  E-value=1.6e-25  Score=215.75  Aligned_cols=173  Identities=24%  Similarity=0.340  Sum_probs=136.9

Q ss_pred             HHHHHHhcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-
Q 045092           81 RQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-  159 (307)
Q Consensus        81 ~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-  159 (307)
                      ..++...++|.+.+.||+|+||.||+|....+..||||+++... ...+.|.+|+++|++++|+||+++++++.+.... 
T Consensus       260 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~l  338 (535)
T 2h8h_A          260 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI  338 (535)
T ss_dssp             TCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred             cceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEeeccceE
Confidence            33444567788899999999999999998777889999997543 3456899999999999999999999988653100 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       339 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  418 (535)
T 2h8h_A          339 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY  418 (535)
T ss_dssp             EECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH
T ss_pred             eeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCce
Confidence                                                                                            


Q ss_pred             --------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC
Q 045092          160 --------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF  230 (307)
Q Consensus       160 --------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l  230 (307)
                              ++.|+|||.+..+.++.++|||||||++|||++ |+.||.....      .+ +...+..+      .....
T Consensus       419 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~------~~-~~~~i~~~------~~~~~  485 (535)
T 2h8h_A          419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN------RE-VLDQVERG------YRMPC  485 (535)
T ss_dssp             HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH------HH-HHHHHHTT------CCCCC
T ss_pred             ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH------HH-HHHHHHcC------CCCCC
Confidence                    567999999999999999999999999999999 9999954321      11 11112211      12233


Q ss_pred             chhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          231 GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       231 ~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      +..++..+.+++..|| +.||++||++.+|++.|+...
T Consensus       486 ~~~~~~~l~~li~~cl-~~dP~~RPt~~~l~~~L~~~~  522 (535)
T 2h8h_A          486 PPECPESLHDLMCQCW-RKEPEERPTFEYLQAFLEDYF  522 (535)
T ss_dssp             CTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHTSS
T ss_pred             CCCCCHHHHHHHHHHc-CCChhHCcCHHHHHHHHHHHh
Confidence            4456778999999999 999999999999999998864

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.92  E-value=7.5e-26  Score=200.28  Aligned_cols=169  Identities=21%  Similarity=0.336  Sum_probs=135.1

Q ss_pred             HHhcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           85 AATNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        85 ~~t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      ...++|...+.||+|+||.||+|... ++..||||.+... ....+.+.+|+.++.+++|+||+++++++.+....    
T Consensus        10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   88 (288)
T 3kfa_A           10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT   88 (288)
T ss_dssp             CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence            34678899999999999999999965 5889999998654 33457899999999999999999999988654211    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        89 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~  168 (288)
T 3kfa_A           89 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA  168 (288)
T ss_dssp             ECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEE
T ss_pred             EcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCcccc
Confidence                                                                                            


Q ss_pred             ------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCch
Q 045092          160 ------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGF  232 (307)
Q Consensus       160 ------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  232 (307)
                            |+.|+|||.+.++.++.++||||||+++++|++ |+.||.......   +..    .      +........+.
T Consensus       169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~---~~~----~------~~~~~~~~~~~  235 (288)
T 3kfa_A          169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYE----L------LEKDYRMERPE  235 (288)
T ss_dssp             ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHH----H------HHTTCCCCCCT
T ss_pred             ccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH----H------HhccCCCCCCC
Confidence                  567999999999999999999999999999999 999986433222   111    1      11222233345


Q ss_pred             hhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          233 KFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       233 ~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      .++..+.+++..|+ +.||.+||++.++++.|+...
T Consensus       236 ~~~~~l~~li~~~l-~~dp~~Rps~~~~~~~l~~~~  270 (288)
T 3kfa_A          236 GCPEKVYELMRACW-QWNPSDRPSFAEIHQAFETMF  270 (288)
T ss_dssp             TCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHh-CCChhhCcCHHHHHHHHHHHH
Confidence            56778999999999 999999999999999987653

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.92  E-value=7.3e-26  Score=204.31  Aligned_cols=178  Identities=12%  Similarity=0.110  Sum_probs=128.8

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC--------
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK--------  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~--------  158 (307)
                      .++|...+.||+|+||.||+|... ++.||||++.... .....+.+|+.++.+++||||+++++++.....        
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv  100 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI  100 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence            568899999999999999999874 7899999986543 334456779999999999999999998765311        


Q ss_pred             --------------------------------------------------C-----------------------------
Q 045092          159 --------------------------------------------------Q-----------------------------  159 (307)
Q Consensus       159 --------------------------------------------------~-----------------------------  159 (307)
                                                                        +                             
T Consensus       101 ~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~  180 (322)
T 3soc_A          101 TAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK  180 (322)
T ss_dssp             EECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             EecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccc
Confidence                                                              0                             


Q ss_pred             ---------------CccccchhhhccC-----CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHH-----HH
Q 045092          160 ---------------PIVYMAPEYAKHG-----YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWL-----GS  214 (307)
Q Consensus       160 ---------------t~~y~aPE~~~~~-----~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~-----~~  214 (307)
                                     |+.|+|||.+.+.     .++.++|||||||++|||++|+.||..........+....     ..
T Consensus       181 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~  260 (322)
T 3soc_A          181 FEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLE  260 (322)
T ss_dssp             ECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHH
T ss_pred             cccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchh
Confidence                           7789999998863     4566889999999999999999999754432222111110     00


Q ss_pred             HHHhhhhhcccccCCCch-----hhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          215 YLKRARKLNGASCSKFGF-----KFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       215 ~~~~~~~~~~~~~~~l~~-----~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      .+.... ......+.+..     ..+..+.+++..|| +.||++|||+.+|++.|+.+.
T Consensus       261 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl-~~dP~~Rps~~ell~~L~~l~  317 (322)
T 3soc_A          261 DMQEVV-VHKKKRPVLRDYWQKHAGMAMLCETIEECW-DHDAEARLSAGCVGERITQMQ  317 (322)
T ss_dssp             HHHHHH-TTSCCCCCCCGGGGSSHHHHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhhhhh-hcccCCCCccccccccchHHHHHHHHHHHc-cCChhhCcCHHHHHHHHHHHH
Confidence            000000 11222232222     23446999999999 999999999999999998754

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.92  E-value=3e-25  Score=196.09  Aligned_cols=168  Identities=21%  Similarity=0.280  Sum_probs=131.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc----CCCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           87 TNNFASENEISERGFGPVYRGLLA----DGKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      .++|...+.||+|+||.||+|...    .+..||||.+... .....+.+.+|+.++.+++||||+++++++.+....  
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~lv   93 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII   93 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEE
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccCccEEE
Confidence            567888999999999999999853    2457999998754 333456799999999999999999999987543110  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  173 (281)
T 1mp8_A           94 MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK  173 (281)
T ss_dssp             EECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC--------------
T ss_pred             EecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCcccccc
Confidence                                                                                            


Q ss_pred             ------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCch
Q 045092          160 ------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGF  232 (307)
Q Consensus       160 ------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  232 (307)
                            |+.|+|||.+..+.++.++||||||+++|||++ |+.||.......   +..    .+      .......++.
T Consensus       174 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~---~~~----~i------~~~~~~~~~~  240 (281)
T 1mp8_A          174 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---VIG----RI------ENGERLPMPP  240 (281)
T ss_dssp             -----CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHH----HH------HTTCCCCCCT
T ss_pred             cccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH---HHH----HH------HcCCCCCCCC
Confidence                  457999999998999999999999999999997 999996443221   111    11      1111233445


Q ss_pred             hhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          233 KFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       233 ~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      .++..+.+++..|+ +.||.+||++.++++.|+.+.
T Consensus       241 ~~~~~l~~li~~~l-~~~p~~Rps~~~l~~~l~~~~  275 (281)
T 1mp8_A          241 NCPPTLYSLMTKCW-AYDPSRRPRFTELKAQLSTIL  275 (281)
T ss_dssp             TCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHc-cCChhhCcCHHHHHHHHHHHH
Confidence            66778999999999 999999999999999998753

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.92  E-value=1.8e-25  Score=200.61  Aligned_cols=170  Identities=19%  Similarity=0.246  Sum_probs=129.0

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-------
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-------  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-------  158 (307)
                      .++|...+.||+|+||.||++.. .+++.||||++........+.+.+|+.++..++|+||+++++++.....       
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  107 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL  107 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence            46789999999999999999995 5789999999876666667789999999999999999999998862100       


Q ss_pred             ---------------------C----------------------------------------------------------
Q 045092          159 ---------------------Q----------------------------------------------------------  159 (307)
Q Consensus       159 ---------------------~----------------------------------------------------------  159 (307)
                                           .                                                          
T Consensus       108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~  187 (317)
T 2buj_A          108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIH  187 (317)
T ss_dssp             EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEE
T ss_pred             EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhcccc
Confidence                                 0                                                          


Q ss_pred             ------------------CccccchhhhccCC---CCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHh
Q 045092          160 ------------------PIVYMAPEYAKHGY---LTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKR  218 (307)
Q Consensus       160 ------------------t~~y~aPE~~~~~~---~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~  218 (307)
                                        |+.|+|||.+....   ++.++||||||+++|||++|+.||........ .+..    ..  
T Consensus       188 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~----~~--  260 (317)
T 2buj_A          188 VEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD-SVAL----AV--  260 (317)
T ss_dssp             EESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS-CHHH----HH--
T ss_pred             cccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc-hhhH----Hh--
Confidence                              56799999987543   68999999999999999999999953221111 1111    11  


Q ss_pred             hhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          219 ARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       219 ~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                          ...........++..+.+++..|+ +.||.+||++.++++.|+.+.
T Consensus       261 ----~~~~~~~~~~~~~~~l~~li~~~l-~~dp~~Rps~~~ll~~L~~~~  305 (317)
T 2buj_A          261 ----QNQLSIPQSPRHSSALWQLLNSMM-TVDPHQRPHIPLLLSQLEALQ  305 (317)
T ss_dssp             ----HCC--CCCCTTSCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHTC
T ss_pred             ----hccCCCCccccCCHHHHHHHHHHh-hcChhhCCCHHHHHHHhhhcC
Confidence                111111122345668999999999 999999999999999998764

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.92  E-value=9.9e-25  Score=193.65  Aligned_cols=171  Identities=22%  Similarity=0.327  Sum_probs=130.4

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC------
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK------  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~------  158 (307)
                      .++|...+.||+|+||.||+|...  ..||||.++..  .....+.|.+|+.++.+++|+||+++++++.....      
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~  100 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQW  100 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred             ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCccEEEEEe
Confidence            457888999999999999999853  36999998744  33445789999999999999999999997654310      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  180 (289)
T 3og7_A          101 CEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE  180 (289)
T ss_dssp             CCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC---------------
T ss_pred             cCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceecccccccccccccc
Confidence                                                                                            


Q ss_pred             ---CCccccchhhhc---cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCch
Q 045092          159 ---QPIVYMAPEYAK---HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGF  232 (307)
Q Consensus       159 ---~t~~y~aPE~~~---~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  232 (307)
                         +|+.|+|||.+.   .+.++.++||||||++++||++|+.||......      +.+......+.  .......+..
T Consensus       181 ~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~~--~~~~~~~~~~  252 (289)
T 3og7_A          181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR------DQIIEMVGRGS--LSPDLSKVRS  252 (289)
T ss_dssp             ---CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH------HHHHHHHHHTS--CCCCTTSSCT
T ss_pred             ccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH------HHHHHHhcccc--cCcchhhccc
Confidence               077899999986   567889999999999999999999999643221      11222222221  1111122334


Q ss_pred             hhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          233 KFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       233 ~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      .++..+.+++..|+ +.||.+||++.++++.|+...
T Consensus       253 ~~~~~l~~li~~~l-~~~p~~Rps~~ell~~L~~l~  287 (289)
T 3og7_A          253 NCPKRMKRLMAECL-KKKRDERPSFPRILAEIEELA  287 (289)
T ss_dssp             TSCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHTT
T ss_pred             cCCHHHHHHHHHHc-cCChhhCCCHHHHHHHHHHHh
Confidence            56678999999999 999999999999999998764

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.92  E-value=3.4e-25  Score=195.32  Aligned_cols=164  Identities=23%  Similarity=0.291  Sum_probs=131.3

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      .++|...+.||+|+||.||++.. +++.||||.++...  ..+.+.+|+.++.+++|+||+++++++.+....       
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~   96 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   96 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence            56788999999999999999987 48899999986543  456799999999999999999999987543211       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~  176 (278)
T 1byg_A           97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL  176 (278)
T ss_dssp             CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------------C
T ss_pred             CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccccccccCCCc
Confidence                                                                                            


Q ss_pred             CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHH
Q 045092          160 PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRT  238 (307)
Q Consensus       160 t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  238 (307)
                      ++.|+|||.+.++.++.++||||||++++||++ |+.||.......   +..    .      +.....+..+..++..+
T Consensus       177 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~---~~~----~------~~~~~~~~~~~~~~~~l  243 (278)
T 1byg_A          177 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVP----R------VEKGYKMDAPDGCPPAV  243 (278)
T ss_dssp             CTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG---HHH----H------HTTTCCCCCCTTCCHHH
T ss_pred             cccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH----H------HhcCCCCCCcccCCHHH
Confidence            678999999999999999999999999999998 999996433211   111    1      12222334455667789


Q ss_pred             HHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          239 SDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      .+++..|+ +.||.+||++.++++.|+.+
T Consensus       244 ~~li~~~l-~~~p~~Rps~~~l~~~L~~i  271 (278)
T 1byg_A          244 YEVMKNCW-HLDAAMRPSFLQLREQLEHI  271 (278)
T ss_dssp             HHHHHHHT-CSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHh-cCChhhCCCHHHHHHHHHHH
Confidence            99999999 99999999999999998875

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.92  E-value=8.4e-25  Score=196.50  Aligned_cols=172  Identities=17%  Similarity=0.241  Sum_probs=125.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCCh--hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSK--QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      .++|...+.||+|+||.||+|...+++.||||++.....  .....+.+|+.++.+++||||+++++++.+....     
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   99 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE   99 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred             HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence            477899999999999999999987899999999864422  2346789999999999999999999988764211     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       100 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~  179 (311)
T 3niz_A          100 FMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHE  179 (311)
T ss_dssp             CCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---CC
T ss_pred             CCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcccccCC
Confidence                                                                                            


Q ss_pred             --Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhh---------------
Q 045092          160 --PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARK---------------  221 (307)
Q Consensus       160 --t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~---------------  221 (307)
                        |+.|+|||.+.+ ..++.++|||||||+++||++|+.||........   ...+...+.....               
T Consensus       180 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~  256 (311)
T 3niz_A          180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ---LPKIFSILGTPNPREWPQVQELPLWKQR  256 (311)
T ss_dssp             CCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH---HHHHHHHHCCCCTTTSGGGTTSHHHHSC
T ss_pred             cccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHHCCCChHHhhhhhccchhhhc
Confidence              778999999876 5689999999999999999999999965443221   1111111110000               


Q ss_pred             hcccccC----CCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          222 LNGASCS----KFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       222 ~~~~~~~----~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .......    .+...++.++.+++..|+ +.||.+|||+.|+++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L-~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          257 TFQVFEKKPWSSIIPGFCQEGIDLLSNML-CFDPNKRISARDAMN  300 (311)
T ss_dssp             CCCCCCCCCHHHHSTTCCHHHHHHHHHHS-CSCTTTSCCHHHHHT
T ss_pred             ccccccCCcHHHhCcccCHHHHHHHHHHc-CCChhHCCCHHHHhc
Confidence            0000000    011223457889999999 999999999999986

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.92  E-value=8.4e-26  Score=199.19  Aligned_cols=168  Identities=26%  Similarity=0.334  Sum_probs=133.3

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           86 ATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      ..++|...+.||+|+||.||+|...++..||||.+.... ...+.+.+|++++.+++|+||+++++++.+....      
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~   89 (279)
T 1qpc_A           11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYM   89 (279)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECC
T ss_pred             CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEEEecC
Confidence            356788899999999999999998778899999986543 3457899999999999999999999987643100      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  169 (279)
T 1qpc_A           90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG  169 (279)
T ss_dssp             TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTT
T ss_pred             CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccC
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhH
Q 045092          160 ---PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFY  235 (307)
Q Consensus       160 ---t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  235 (307)
                         +..|+|||.+.++.++.++||||||++++||++ |+.||......      + +...+      .....+..+..++
T Consensus       170 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------~-~~~~~------~~~~~~~~~~~~~  236 (279)
T 1qpc_A          170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP------E-VIQNL------ERGYRMVRPDNCP  236 (279)
T ss_dssp             CCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------H-HHHHH------HTTCCCCCCTTCC
T ss_pred             CCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH------H-HHHHH------hcccCCCCccccc
Confidence               457999999998899999999999999999999 99998543211      1 11111      1112233344566


Q ss_pred             HHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          236 RRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       236 ~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      ..+.+++..|+ +.||++||++.++++.|+...
T Consensus       237 ~~l~~li~~~l-~~~p~~Rps~~~l~~~l~~~~  268 (279)
T 1qpc_A          237 EELYQLMRLCW-KERPEDRPTFDYLRSVLEDFF  268 (279)
T ss_dssp             HHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHh-ccChhhCCCHHHHHHHHHHHH
Confidence            78999999999 999999999999999998753

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.92  E-value=5.4e-25  Score=196.12  Aligned_cols=175  Identities=15%  Similarity=0.131  Sum_probs=133.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      .++|...+.||+|+||.||++.. .+++.||+|.+...   .....+.|.+|+.++.+++||||+++++++.+....   
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            35788999999999999999995 47899999998543   233456899999999999999999999988654110   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        90 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  169 (294)
T 4eqm_A           90 MEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQT  169 (294)
T ss_dssp             EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC--------
T ss_pred             EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccccccc
Confidence                                                                                            


Q ss_pred             -----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          160 -----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       160 -----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                           |+.|+|||.+.+..++.++||||||+++|||++|+.||.....      .......+..   ............+
T Consensus       170 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~------~~~~~~~~~~---~~~~~~~~~~~~~  240 (294)
T 4eqm_A          170 NHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA------VSIAIKHIQD---SVPNVTTDVRKDI  240 (294)
T ss_dssp             -----CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH------HHHHHHHHSS---CCCCHHHHSCTTS
T ss_pred             CccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHhhc---cCCCcchhcccCC
Confidence                 7889999999999999999999999999999999999964321      1111111111   0111112223445


Q ss_pred             HHHHHHHhccccCCCCCCCCC-CHHHHHHHhccccccc
Q 045092          235 YRRTSDGNDQCSSSVTPTNRP-LMSFVVSMLEDKAEVC  271 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RP-s~~~vl~~L~~~~~v~  271 (307)
                      +..+.+++.+|+ +.||.+|| ++.++.+.|.......
T Consensus       241 ~~~l~~li~~~l-~~dp~~R~~~~~~l~~~l~~~~~~~  277 (294)
T 4eqm_A          241 PQSLSNVILRAT-EKDKANRYKTIQEMKDDLSSVLHEN  277 (294)
T ss_dssp             CHHHHHHHHHHS-CSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred             CHHHHHHHHHHh-cCCHhHccccHHHHHHHHHHHHhhc
Confidence            668999999999 99999999 8999999998765433

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.92  E-value=2.7e-25  Score=200.69  Aligned_cols=176  Identities=21%  Similarity=0.248  Sum_probs=134.7

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-----cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           87 TNNFASENEISERGFGPVYRGLL-----ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      .++|...+.||+|+||.||++.+     .+++.||||++........+.+.+|++++.+++|+||+++++++......  
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  101 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL  101 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence            36788899999999999999984     36789999999877666677899999999999999999999987632111  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~  181 (327)
T 3lxl_A          102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK  181 (327)
T ss_dssp             EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTC
T ss_pred             EEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceecccCC
Confidence                                                                                            


Q ss_pred             -----------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccC--------cccHHHHHHHHHHhhh
Q 045092          160 -----------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKED--------KFYLLDWLGSYLKRAR  220 (307)
Q Consensus       160 -----------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~--------~~~l~~~~~~~~~~~~  220 (307)
                                 |+.|+|||.+.++.++.++||||||+++++|++|+.|+.......        .......+...     
T Consensus       182 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  256 (327)
T 3lxl_A          182 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLEL-----  256 (327)
T ss_dssp             SEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHH-----
T ss_pred             ccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHH-----
Confidence                       555999999999899999999999999999999999985322110        00000111111     


Q ss_pred             hhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          221 KLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       221 ~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                       +........+..++..+.+++..|+ +.||.+||++.++++.|+....
T Consensus       257 -~~~~~~~~~~~~~~~~l~~li~~~l-~~dP~~Rps~~ell~~L~~~~~  303 (327)
T 3lxl_A          257 -LEEGQRLPAPPACPAEVHELMKLCW-APSPQDRPSFSALGPQLDMLWS  303 (327)
T ss_dssp             -HHTTCCCCCCTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHC--
T ss_pred             -hhcccCCCCCCcccHHHHHHHHHHc-CCChhhCcCHHHHHHHHHHHHh
Confidence             1222233334566778999999999 9999999999999999987643

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.92  E-value=4.1e-25  Score=197.83  Aligned_cols=171  Identities=20%  Similarity=0.313  Sum_probs=129.7

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      .++|...+.||+|+||.||+|.. .+++.||||++...   .......+.+|+.++.+++|+||+++++++......   
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv  110 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV  110 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence            35789999999999999999995 47899999998743   233456799999999999999999999987654100   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~  190 (310)
T 2wqm_A          111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT  190 (310)
T ss_dssp             EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC----------
T ss_pred             EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCC
Confidence                                                                                            


Q ss_pred             --------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCc
Q 045092          160 --------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFG  231 (307)
Q Consensus       160 --------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~  231 (307)
                              ++.|+|||.+.++.++.++||||||++++||++|+.||.....    ...... ..+....     ..+...
T Consensus       191 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~-~~~~~~~-----~~~~~~  260 (310)
T 2wqm_A          191 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLYSLC-KKIEQCD-----YPPLPS  260 (310)
T ss_dssp             --------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C----CHHHHH-HHHHTTC-----SCCCCT
T ss_pred             ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch----hHHHHH-HHhhccc-----CCCCcc
Confidence                    6789999999999999999999999999999999999963221    111111 1111111     111112


Q ss_pred             hhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          232 FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       232 ~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      ..++..+.+++..|+ +.||.+||++.+|++.|+.+.
T Consensus       261 ~~~~~~l~~li~~~l-~~dp~~Rps~~~il~~l~~l~  296 (310)
T 2wqm_A          261 DHYSEELRQLVNMCI-NPDPEKRPDVTYVYDVAKRMH  296 (310)
T ss_dssp             TTSCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             cccCHHHHHHHHHHc-CCChhhCCCHHHHHHHHHHHH
Confidence            445668999999999 999999999999999988754

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.92  E-value=3.5e-25  Score=205.17  Aligned_cols=166  Identities=18%  Similarity=0.211  Sum_probs=131.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      .++|...+.||+|+||.||+|... +++.||+|.+..........+.+|+.++.+++|+||+++++++.+....      
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            568999999999999999999954 7899999999766555566899999999999999999999988654100      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~  209 (387)
T 1kob_A          130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV  209 (387)
T ss_dssp             CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEE
T ss_pred             CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCcceee
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 ---PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 ---t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                         |+.|+|||++.++.++.++|||||||++|||++|+.||.....      ...+.. +..   .....++.....++.
T Consensus       210 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~------~~~~~~-i~~---~~~~~~~~~~~~~s~  279 (387)
T 1kob_A          210 TTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD------LETLQN-VKR---CDWEFDEDAFSSVSP  279 (387)
T ss_dssp             ECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHH-HHH---CCCCCCSSTTTTSCH
T ss_pred             eccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH------HHHHHH-HHh---CCCCCCccccccCCH
Confidence               8889999999999999999999999999999999999964321      111111 111   111122233345567


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .+.+++..|+ +.||.+||++.++++.
T Consensus       280 ~~~~li~~~L-~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          280 EAKDFIKNLL-QKEPRKRLTVHDALEH  305 (387)
T ss_dssp             HHHHHHHTTS-CSSGGGSCCHHHHHTS
T ss_pred             HHHHHHHHHc-CCChhHCcCHHHHhhC
Confidence            8999999999 9999999999999874

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.92  E-value=3.7e-25  Score=201.42  Aligned_cols=165  Identities=18%  Similarity=0.234  Sum_probs=125.5

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCC--CCccceeeeeecCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQH--PNLVKLYRLCTETLK----  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h--~niv~l~g~~~~~~~----  158 (307)
                      .+.|.+.+.||+|+||.||++...+++.||||++...  .....+.+.+|+.++.+++|  +||+++++++.....    
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv   87 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV   87 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence            3568889999999999999999878999999998643  33445789999999999976  999999998865410    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        88 ~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~~~~~kl~DFG~a~~~~~~~~~~~~~  167 (343)
T 3dbq_A           88 MECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKD  167 (343)
T ss_dssp             ECCCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSSCCC----------
T ss_pred             EeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEECCcEEEeecccccccCcccccccCC
Confidence                                                                                            


Q ss_pred             ---CCccccchhhhcc-----------CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcc
Q 045092          159 ---QPIVYMAPEYAKH-----------GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNG  224 (307)
Q Consensus       159 ---~t~~y~aPE~~~~-----------~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  224 (307)
                         +|+.|+|||++.+           +.++.++|||||||++|||++|+.||.....     ........      +..
T Consensus       168 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~~~------~~~  236 (343)
T 3dbq_A          168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAI------IDP  236 (343)
T ss_dssp             --CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHH------HCT
T ss_pred             CCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh-----HHHHHHHH------hcC
Confidence               1888999999865           6789999999999999999999999953221     11111111      111


Q ss_pred             cccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          225 ASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       225 ~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ......+...+..+.+++..|+ +.||.+||++.++++.
T Consensus       237 ~~~~~~~~~~~~~l~~li~~~L-~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          237 NHEIEFPDIPEKDLQDVLKCCL-KRDPKQRISIPELLAH  274 (343)
T ss_dssp             TSCCCCCCCSCHHHHHHHHHHT-CSSTTTSCCHHHHHTS
T ss_pred             CcccCCcccCCHHHHHHHHHHc-CCChhHCCCHHHHHhC
Confidence            2222333444568899999999 9999999999999864

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.92  E-value=2.5e-25  Score=201.41  Aligned_cols=171  Identities=21%  Similarity=0.341  Sum_probs=133.0

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCE----EEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKV----IEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~----vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-  159 (307)
                      .++|...+.||+|+||.||+|... +++.    ||+|.+... .....+.+.+|+.++.+++||||+++++++...... 
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   93 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL   93 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSEEE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCceE
Confidence            467899999999999999999953 4443    578877543 334567899999999999999999999988664110 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        94 v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~  173 (327)
T 3lzb_A           94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE  173 (327)
T ss_dssp             EECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC----------
T ss_pred             EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcccc
Confidence                                                                                            


Q ss_pred             --------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC
Q 045092          160 --------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF  230 (307)
Q Consensus       160 --------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l  230 (307)
                              |+.|+|||.+.+..++.++|||||||++|||++ |+.||.......   +..    .+.      .......
T Consensus       174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~~----~~~------~~~~~~~  240 (327)
T 3lzb_A          174 YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISS----ILE------KGERLPQ  240 (327)
T ss_dssp             ------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHH----HHH------TTCCCCC
T ss_pred             ccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HHH----HHH------cCCCCCC
Confidence                    557999999999999999999999999999999 999996543322   111    111      1112233


Q ss_pred             chhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccccc
Q 045092          231 GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAEVC  271 (307)
Q Consensus       231 ~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~v~  271 (307)
                      +..++..+.+++..|+ +.||.+||++.++++.|+......
T Consensus       241 ~~~~~~~l~~li~~~l-~~dp~~Rps~~ell~~L~~~~~~~  280 (327)
T 3lzb_A          241 PPICTIDVYMIMRKCW-MIDADSRPKFRELIIEFSKMARDP  280 (327)
T ss_dssp             CTTBCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred             CccCCHHHHHHHHHHc-CCChhHCcCHHHHHHHHHHHHhCc
Confidence            4456668999999999 999999999999999998876543

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.92  E-value=3.7e-25  Score=198.04  Aligned_cols=169  Identities=24%  Similarity=0.344  Sum_probs=133.1

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEE------cCCCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC
Q 045092           86 ATNNFASENEISERGFGPVYRGLL------ADGKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK  158 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  158 (307)
                      ..++|...+.||+|+||.||+|..      .++..||||.+... .....+.+.+|+.++.+++||||+++++++.+...
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  100 (314)
T 2ivs_A           21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP  100 (314)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence            467888999999999999999984      23578999999754 33445789999999999999999999998754310


Q ss_pred             --------------------------------------------C-----------------------------------
Q 045092          159 --------------------------------------------Q-----------------------------------  159 (307)
Q Consensus       159 --------------------------------------------~-----------------------------------  159 (307)
                                                                  .                                   
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~N  180 (314)
T 2ivs_A          101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARN  180 (314)
T ss_dssp             CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchhe
Confidence                                                        0                                   


Q ss_pred             ----------------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccC
Q 045092          160 ----------------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKED  204 (307)
Q Consensus       160 ----------------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~  204 (307)
                                                        |+.|+|||.+.++.++.++||||||+++|||++ |+.||.......
T Consensus       181 Ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~  260 (314)
T 2ivs_A          181 ILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER  260 (314)
T ss_dssp             EEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred             EEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence                                              566999999999899999999999999999999 999996443222


Q ss_pred             cccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          205 KFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       205 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                         +.    ..+      .....+..+..++..+.+++..|+ +.||.+||++.++++.|+...
T Consensus       261 ---~~----~~~------~~~~~~~~~~~~~~~~~~li~~~l-~~dp~~Rps~~~l~~~l~~~~  310 (314)
T 2ivs_A          261 ---LF----NLL------KTGHRMERPDNCSEEMYRLMLQCW-KQEPDKRPVFADISKDLEKMM  310 (314)
T ss_dssp             ---HH----HHH------HTTCCCCCCTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             ---HH----HHh------hcCCcCCCCccCCHHHHHHHHHHc-cCChhhCcCHHHHHHHHHHHH
Confidence               11    111      112223344566778999999999 999999999999999988753

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.92  E-value=3.7e-25  Score=216.49  Aligned_cols=166  Identities=18%  Similarity=0.294  Sum_probs=129.9

Q ss_pred             cCcccCC-cccCCCCeeEEEEEEc---CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           88 NNFASEN-EISERGFGPVYRGLLA---DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        88 ~~f~~~~-~lG~G~~g~Vy~~~~~---~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      +++...+ .||+|+||.||+|...   ++..||||+++... ....+.|.+|+++|.+++|+|||+++++|......   
T Consensus       335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv~  414 (613)
T 2ozo_A          335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVM  414 (613)
T ss_dssp             TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEEE
T ss_pred             cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEEE
Confidence            3444444 7999999999999853   45679999997643 33567899999999999999999999998653100   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       415 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~  494 (613)
T 2ozo_A          415 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT  494 (613)
T ss_dssp             ECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------
T ss_pred             EeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceee
Confidence                                                                                            


Q ss_pred             -------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCc
Q 045092          160 -------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFG  231 (307)
Q Consensus       160 -------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~  231 (307)
                             |+.|+|||++.++.++.++|||||||++|||++ |+.||......+   +    ...+..+      .....+
T Consensus       495 ~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~---~----~~~i~~~------~~~~~p  561 (613)
T 2ozo_A          495 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE---V----MAFIEQG------KRMECP  561 (613)
T ss_dssp             -------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH---H----HHHHHTT------CCCCCC
T ss_pred             eccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---H----HHHHHcC------CCCCCC
Confidence                   467999999999999999999999999999998 999996433211   1    1222222      223344


Q ss_pred             hhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          232 FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       232 ~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      ..++..+.+++..|| +.||++||++.+|++.|+..
T Consensus       562 ~~~~~~l~~li~~cl-~~dP~~RPs~~~l~~~L~~~  596 (613)
T 2ozo_A          562 PECPPELYALMSDCW-IYKWEDRPDFLTVEQRMRAC  596 (613)
T ss_dssp             TTCCHHHHHHHHHTT-CSSTTTSCCHHHHHHHHHHH
T ss_pred             CcCCHHHHHHHHHHc-CCChhHCcCHHHHHHHHHHH
Confidence            567779999999999 99999999999999998874

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=4e-25  Score=195.89  Aligned_cols=167  Identities=18%  Similarity=0.284  Sum_probs=130.6

Q ss_pred             hcCcccCC-cccCCCCeeEEEEEEc---CCCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           87 TNNFASEN-EISERGFGPVYRGLLA---DGKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        87 t~~f~~~~-~lG~G~~g~Vy~~~~~---~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      .++|.... .||+|+||.||+|...   ++..||||.++.. .....+.+.+|+.++.+++||||+++++++......  
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv   87 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLV   87 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEE
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEEE
Confidence            35566665 8999999999999853   5778999999764 334567899999999999999999999988543100  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~  167 (287)
T 1u59_A           88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYY  167 (287)
T ss_dssp             EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEE
T ss_pred             EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCccee
Confidence                                                                                            


Q ss_pred             --------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC
Q 045092          160 --------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF  230 (307)
Q Consensus       160 --------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l  230 (307)
                              |+.|+|||.+.++.++.++||||||+++|||++ |+.||.......   +    ...+.      ....+.+
T Consensus       168 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~----~~~i~------~~~~~~~  234 (287)
T 1u59_A          168 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE---V----MAFIE------QGKRMEC  234 (287)
T ss_dssp             CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH---H----HHHHH------TTCCCCC
T ss_pred             eccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH---H----HHHHh------cCCcCCC
Confidence                    467999999998889999999999999999999 999996433211   1    11111      1222334


Q ss_pred             chhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          231 GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       231 ~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      +..++..+.+++..|+ +.||.+||++.++++.|...
T Consensus       235 ~~~~~~~l~~li~~~l-~~~p~~Rps~~~l~~~l~~~  270 (287)
T 1u59_A          235 PPECPPELYALMSDCW-IYKWEDRPDFLTVEQRMRAC  270 (287)
T ss_dssp             CTTCCHHHHHHHHHTT-CSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCcCHHHHHHHHHHc-CCChhhCcCHHHHHHHHHHH
Confidence            4566779999999999 99999999999999998875

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.92  E-value=1.5e-24  Score=195.14  Aligned_cols=178  Identities=12%  Similarity=0.120  Sum_probs=132.7

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      ++|.+.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++.+++|+||+++++++......      
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence            56888999999999999999964 68999999987543 23456788999999999999999999987653210      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~  168 (319)
T 4euu_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED  168 (319)
T ss_dssp             ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCT
T ss_pred             eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCC
Confidence                                                                                            


Q ss_pred             ---------Cccccchhhhc--------cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhh-
Q 045092          160 ---------PIVYMAPEYAK--------HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARK-  221 (307)
Q Consensus       160 ---------t~~y~aPE~~~--------~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~-  221 (307)
                               |+.|+|||.+.        ++.++.++|||||||++|||++|+.||........  ....+......... 
T Consensus       169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~p~~  246 (319)
T 4euu_A          169 DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR--NKEVMYKIITGKPSG  246 (319)
T ss_dssp             TCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGG--CHHHHHHHHHHCCTT
T ss_pred             CCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccch--hHHHHHHHhcCCCcc
Confidence                     77899999886        57789999999999999999999999964332221  12222222221100 


Q ss_pred             -h---------------cccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          222 -L---------------NGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       222 -~---------------~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                       .               .......+....+..+.+++..|+ +.||++||++.|+++...+..
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L-~~dP~~R~s~~ell~h~~d~~  308 (319)
T 4euu_A          247 AISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANIL-EADQEKCWGFDQFFAETSDIL  308 (319)
T ss_dssp             CCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHS-CCCTTTSCCHHHHHHHHHHHT
T ss_pred             cchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhc-cCChhhhccHHHhhhccHHHh
Confidence             0               001112334455668899999999 999999999999999887643

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.92  E-value=1.7e-25  Score=201.20  Aligned_cols=178  Identities=19%  Similarity=0.307  Sum_probs=138.1

Q ss_pred             ccHHHHHHHhcCcccCCcccCCCCeeEEEEEEc------CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCcccee
Q 045092           78 FHLRQIKAATNNFASENEISERGFGPVYRGLLA------DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLY  150 (307)
Q Consensus        78 ~~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~  150 (307)
                      +...++....++|...+.||+|+||.||+|...      +++.||||.+.... ......+.+|+.++.+++|+||++++
T Consensus        15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~   94 (322)
T 1p4o_A           15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL   94 (322)
T ss_dssp             CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred             cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence            444455566788999999999999999999843      36789999997543 33455799999999999999999999


Q ss_pred             eeeecCCCC-----------------------------------------------------------------------
Q 045092          151 RLCTETLKQ-----------------------------------------------------------------------  159 (307)
Q Consensus       151 g~~~~~~~~-----------------------------------------------------------------------  159 (307)
                      +++.+....                                                                       
T Consensus        95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~  174 (322)
T 1p4o_A           95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED  174 (322)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTT
T ss_pred             EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCC
Confidence            988654211                                                                       


Q ss_pred             ----------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHH
Q 045092          160 ----------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLD  210 (307)
Q Consensus       160 ----------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~  210 (307)
                                                  |+.|+|||.+.++.++.++||||||+++|||++ |+.||.....      ..
T Consensus       175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~~  248 (322)
T 1p4o_A          175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN------EQ  248 (322)
T ss_dssp             CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH------HH
T ss_pred             CeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH------HH
Confidence                                        566999999999999999999999999999999 8899854321      11


Q ss_pred             HHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          211 WLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                       ....+..+      ..+..+..++..+.+++..|+ +.||.+||++.++++.|+....
T Consensus       249 -~~~~~~~~------~~~~~~~~~~~~l~~li~~~l-~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          249 -VLRFVMEG------GLLDKPDNCPDMLFELMRMCW-QYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             -HHHHHHTT------CCCCCCTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHGGGSC
T ss_pred             -HHHHHHcC------CcCCCCCCCCHHHHHHHHHHc-CCCcccCcCHHHHHHHHHHhhc
Confidence             11111111      112334456678999999999 9999999999999999998755

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.92  E-value=3.2e-25  Score=203.65  Aligned_cols=165  Identities=18%  Similarity=0.194  Sum_probs=127.3

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChh------cHHHHHHHHHHHhhCCCCCccceeeeeecCCC-
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQ------GNREIVNEIGMISALQHPNLVKLYRLCTETLK-  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-  158 (307)
                      .+.|...+.||+|+||.||++... +|+.||||.++.....      ..+.+.+|+.++.+++||||+++++++.+... 
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            567999999999999999999954 7899999998754221      34679999999999999999999998876410 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        91 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~  170 (361)
T 2yab_A           91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE  170 (361)
T ss_dssp             EEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECC
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcC
Confidence                                                                                            


Q ss_pred             ---------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC
Q 045092          159 ---------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK  229 (307)
Q Consensus       159 ---------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  229 (307)
                               +|+.|+|||.+.+..++.++|||||||++|+|++|+.||......      +.. ..+..+.   ...++.
T Consensus       171 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~------~~~-~~i~~~~---~~~~~~  240 (361)
T 2yab_A          171 DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ------ETL-ANITAVS---YDFDEE  240 (361)
T ss_dssp             TTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHH-HHHHTTC---CCCCHH
T ss_pred             CCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH------HHH-HHHHhcC---CCCCch
Confidence                     078899999999989999999999999999999999999643211      111 1111111   111111


Q ss_pred             CchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          230 FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       230 l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .....+..+.+++..|+ ..||.+||++.++++
T Consensus       241 ~~~~~s~~~~~li~~~L-~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          241 FFSQTSELAKDFIRKLL-VKETRKRLTIQEALR  272 (361)
T ss_dssp             HHTTSCHHHHHHHHHHS-CSSTTTSCCHHHHHT
T ss_pred             hccCCCHHHHHHHHHHC-CCChhHCcCHHHHhc
Confidence            12234558899999999 999999999999985

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.92  E-value=4.7e-25  Score=197.53  Aligned_cols=178  Identities=22%  Similarity=0.288  Sum_probs=138.1

Q ss_pred             ccHHHHHHHhcCcccCCcccCCCCeeEEEEEE------cCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhC-CCCCccce
Q 045092           78 FHLRQIKAATNNFASENEISERGFGPVYRGLL------ADGKVIEVKQLSSKS-KQGNREIVNEIGMISAL-QHPNLVKL  149 (307)
Q Consensus        78 ~~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l  149 (307)
                      +...++....++|...+.||+|+||.||+|..      .+++.||||.+.... ....+.+.+|+.++.++ +||||+++
T Consensus        17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~   96 (316)
T 2xir_A           17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   96 (316)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence            45566666778999999999999999999983      246789999997543 33456799999999999 79999999


Q ss_pred             eeeeecCCCC----------------------------------------------------------------------
Q 045092          150 YRLCTETLKQ----------------------------------------------------------------------  159 (307)
Q Consensus       150 ~g~~~~~~~~----------------------------------------------------------------------  159 (307)
                      ++++......                                                                      
T Consensus        97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp  176 (316)
T 2xir_A           97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA  176 (316)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCcc
Confidence            9987653110                                                                      


Q ss_pred             ------------------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCc
Q 045092          160 ------------------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTK  202 (307)
Q Consensus       160 ------------------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~  202 (307)
                                                          |+.|+|||.+.++.++.++||||||+++|||++ |+.||.....
T Consensus       177 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~  256 (316)
T 2xir_A          177 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI  256 (316)
T ss_dssp             GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC
T ss_pred             ceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccch
Confidence                                                567999999999999999999999999999998 9999964332


Q ss_pred             cCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          203 EDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       203 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      ..  .    ....+..+      .....+...+..+.+++..|+ +.||.+||++.++++.|+...
T Consensus       257 ~~--~----~~~~~~~~------~~~~~~~~~~~~l~~li~~~l-~~dp~~Rps~~ell~~L~~~~  309 (316)
T 2xir_A          257 DE--E----FCRRLKEG------TRMRAPDYTTPEMYQTMLDCW-HGEPSQRPTFSELVEHLGNLL  309 (316)
T ss_dssp             SH--H----HHHHHHHT------CCCCCCTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             hH--H----HHHHhccC------ccCCCCCCCCHHHHHHHHHHc-CCChhhCcCHHHHHHHHHHHH
Confidence            11  1    11112111      122333445668999999999 999999999999999998754

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.92  E-value=1.9e-24  Score=191.78  Aligned_cols=171  Identities=18%  Similarity=0.240  Sum_probs=125.2

Q ss_pred             cCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCCh--hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           88 NNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSK--QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      ++|...+.||+|+||.||+|...+++.||||++.....  ...+.+.+|+.++.+++||||+++++++......      
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            57888999999999999999987899999999865432  2346789999999999999999999988754211      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  161 (288)
T 1ob3_A           82 LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEI  161 (288)
T ss_dssp             CSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------
T ss_pred             cCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccccccccc
Confidence                                                                                            


Q ss_pred             -Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhh-----hhc--ccccCC-
Q 045092          160 -PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRAR-----KLN--GASCSK-  229 (307)
Q Consensus       160 -t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~-----~~~--~~~~~~-  229 (307)
                       |+.|+|||.+.+ ..++.++|||||||+++||++|+.||.......   ....+........     ...  ...++. 
T Consensus       162 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (288)
T 1ob3_A          162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD---QLMRIFRILGTPNSKNWPNVTELPKYDPNF  238 (288)
T ss_dssp             CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred             ccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHHCCCChhhchhhhccccccccc
Confidence             778999999875 458999999999999999999999996432111   1111111110000     000  000111 


Q ss_pred             ----------CchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          230 ----------FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       230 ----------l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                                .....+..+.+++..|+ +.||++||++.++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~li~~~L-~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          239 TVYEPLPWESFLKGLDESGIDLLSKML-KLDPNQRITAKQALE  280 (288)
T ss_dssp             CCCCCCCGGGTCCSCCHHHHHHHHHHT-CSSTTTSCCHHHHHT
T ss_pred             ccccCccHHHHhhhcCHHHHHHHHHHc-CCCcccCCCHHHHhc
Confidence                      11234568889999999 999999999999975

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.92  E-value=7.1e-25  Score=196.14  Aligned_cols=170  Identities=22%  Similarity=0.285  Sum_probs=132.4

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEE------cCCCEEEEEEccCCCh-hcHHHHHHHHHHHhhC-CCCCccceeeeeecCC
Q 045092           86 ATNNFASENEISERGFGPVYRGLL------ADGKVIEVKQLSSKSK-QGNREIVNEIGMISAL-QHPNLVKLYRLCTETL  157 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~  157 (307)
                      ..++|...+.||+|+||.||+|..      .+++.||||.+..... ...+.+.+|+.++.++ +||||+++++++....
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~  100 (313)
T 1t46_A           21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG  100 (313)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence            356788999999999999999984      2567899999975433 3456899999999999 9999999999876431


Q ss_pred             C----------------------------------------C--------------------------------------
Q 045092          158 K----------------------------------------Q--------------------------------------  159 (307)
Q Consensus       158 ~----------------------------------------~--------------------------------------  159 (307)
                      .                                        .                                      
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~  180 (313)
T 1t46_A          101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH  180 (313)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEET
T ss_pred             CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcC
Confidence            0                                        0                                      


Q ss_pred             -----------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHH
Q 045092          160 -----------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLL  209 (307)
Q Consensus       160 -----------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~  209 (307)
                                                   |+.|+|||.+.++.++.++||||||++++||++ |+.||.......  .  
T Consensus       181 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~--  256 (313)
T 1t46_A          181 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS--K--  256 (313)
T ss_dssp             TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH--H--
T ss_pred             CCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh--H--
Confidence                                         457999999999999999999999999999999 999996433211  1  


Q ss_pred             HHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          210 DWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                        ....+..      ...+..+...+..+.+++..|+ +.||.+||++.++++.|+...
T Consensus       257 --~~~~~~~------~~~~~~~~~~~~~l~~li~~~l-~~dp~~Rps~~ell~~L~~~~  306 (313)
T 1t46_A          257 --FYKMIKE------GFRMLSPEHAPAEMYDIMKTCW-DADPLKRPTFKQIVQLIEKQI  306 (313)
T ss_dssp             --HHHHHHH------TCCCCCCTTSCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             --HHHHhcc------CCCCCCcccCCHHHHHHHHHHc-CCCchhCcCHHHHHHHHHHHH
Confidence              1111111      1222233456678999999999 999999999999999998754

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.92  E-value=3.8e-25  Score=199.92  Aligned_cols=165  Identities=20%  Similarity=0.183  Sum_probs=124.0

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh-hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK-QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      .++|...+.||+|+||.||+|... +++.||||++..... ...+.+.+|+.++..++|+||+++++++.+....     
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   85 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence            468999999999999999999954 789999999864432 2345688999999999999999999988764110     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        86 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~  165 (323)
T 3tki_A           86 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN  165 (323)
T ss_dssp             CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBC
T ss_pred             cCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccC
Confidence                                                                                            


Q ss_pred             ----CccccchhhhccCCC-CchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          160 ----PIVYMAPEYAKHGYL-TDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       160 ----t~~y~aPE~~~~~~~-~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                          |+.|+|||++.+..+ +.++|||||||++|||++|+.||........ ....     +..     ..........+
T Consensus       166 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~-----~~~-----~~~~~~~~~~~  234 (323)
T 3tki_A          166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSD-----WKE-----KKTYLNPWKKI  234 (323)
T ss_dssp             SCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH-HHHH-----HHT-----TCTTSTTGGGS
T ss_pred             CCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH-HHHH-----Hhc-----ccccCCccccC
Confidence                778999999987765 7789999999999999999999964432221 1111     111     11111112345


Q ss_pred             HHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      +..+.+++..|+ +.||.+||++.|+++.
T Consensus       235 ~~~~~~li~~~L-~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          235 DSAPLALLHKIL-VENPSARITIPDIKKD  262 (323)
T ss_dssp             CHHHHHHHHHHS-CSSTTTSCCHHHHTTC
T ss_pred             CHHHHHHHHHHc-cCChhhCcCHHHHhhC
Confidence            568889999999 9999999999999764

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.92  E-value=3.8e-25  Score=200.14  Aligned_cols=166  Identities=18%  Similarity=0.226  Sum_probs=126.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh------hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK------QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  159 (307)
                      .+.|...+.||+|+||.||++... +++.||||.+.....      ...+.+.+|+.++.+++||||+++++++.+....
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   89 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   89 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            456889999999999999999954 789999999864322      1356899999999999999999999988654100


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        90 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~  169 (326)
T 2y0a_A           90 ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID  169 (326)
T ss_dssp             EEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred             EEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECC
Confidence                                                                                            


Q ss_pred             ----------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC
Q 045092          160 ----------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK  229 (307)
Q Consensus       160 ----------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  229 (307)
                                |+.|+|||.+..+.++.++|||||||++|||++|+.||......      +.... +...   .......
T Consensus       170 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~-~~~~---~~~~~~~  239 (326)
T 2y0a_A          170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ------ETLAN-VSAV---NYEFEDE  239 (326)
T ss_dssp             TTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHHH-HHHT---CCCCCHH
T ss_pred             CCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH------HHHHH-HHhc---CCCcCcc
Confidence                      77899999999899999999999999999999999999643211      11111 1111   1111111


Q ss_pred             CchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          230 FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       230 l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .....+..+.+++..|+ +.||.+||++.++++.
T Consensus       240 ~~~~~~~~~~~li~~~L-~~dP~~Rpt~~e~l~h  272 (326)
T 2y0a_A          240 YFSNTSALAKDFIRRLL-VKDPKKRMTIQDSLQH  272 (326)
T ss_dssp             HHTTSCHHHHHHHHHHS-CSSGGGSCCHHHHHHS
T ss_pred             ccccCCHHHHHHHHHHc-cCChhhCCCHHHHhcC
Confidence            11234557889999999 9999999999999873

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.92  E-value=2.5e-25  Score=203.26  Aligned_cols=164  Identities=21%  Similarity=0.321  Sum_probs=125.8

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      .+.|...+.||+|+||.||+|.. .+++.||||++....   ....+.+.+|+.++.+++||||+++++++......   
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  132 (348)
T 1u5q_A           53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV  132 (348)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence            34588889999999999999995 578999999986442   22345789999999999999999999988654110   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       133 ~e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~g  212 (348)
T 1u5q_A          133 MEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG  212 (348)
T ss_dssp             EECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCS
T ss_pred             EecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcccC
Confidence                                                                                            


Q ss_pred             Cccccchhhhc---cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 PIVYMAPEYAK---HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 t~~y~aPE~~~---~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                      |+.|+|||.+.   .+.++.++|||||||+++||++|+.||.....      ...+......      .........++.
T Consensus       213 t~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~------~~~~~~~~~~------~~~~~~~~~~~~  280 (348)
T 1u5q_A          213 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------MSALYHIAQN------ESPALQSGHWSE  280 (348)
T ss_dssp             CGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHS------CCCCCCCTTSCH
T ss_pred             CcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHHhc------CCCCCCCCCCCH
Confidence            78899999884   57899999999999999999999999953321      1112211111      111112234566


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .+.+++..|+ +.||++||++.++++.
T Consensus       281 ~l~~li~~~l-~~dP~~Rps~~~ll~h  306 (348)
T 1u5q_A          281 YFRNFVDSCL-QKIPQDRPTSEVLLKH  306 (348)
T ss_dssp             HHHHHHHHHT-CSSGGGSCCHHHHTTC
T ss_pred             HHHHHHHHHc-ccChhhCcCHHHHhhC
Confidence            8899999999 9999999999999753

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.92  E-value=6.6e-25  Score=195.25  Aligned_cols=169  Identities=17%  Similarity=0.236  Sum_probs=124.7

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhh--CCCCCccceeeeeecCC-------
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISA--LQHPNLVKLYRLCTETL-------  157 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~g~~~~~~-------  157 (307)
                      .++|...+.||+|+||.||+|.. +++.||||++...   ....+.+|.+++..  ++||||+++++++....       
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~   82 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW   82 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence            46899999999999999999987 6889999998543   34566777777776  79999999998754320       


Q ss_pred             ---------------------------------------C----------------------------------------
Q 045092          158 ---------------------------------------K----------------------------------------  158 (307)
Q Consensus       158 ---------------------------------------~----------------------------------------  158 (307)
                                                             +                                        
T Consensus        83 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  162 (301)
T 3q4u_A           83 LITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM  162 (301)
T ss_dssp             EEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             EehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeee
Confidence                                                   0                                        


Q ss_pred             ----------------CCccccchhhhccC------CCCchhHHHHHHHHHHHHHhC----------CCCCcCCCccCcc
Q 045092          159 ----------------QPIVYMAPEYAKHG------YLTDKAEVCSFGIVTLEIESG----------RSNVICRTKEDKF  206 (307)
Q Consensus       159 ----------------~t~~y~aPE~~~~~------~~~~~sDV~s~Gvvl~elltg----------~~p~~~~~~~~~~  206 (307)
                                      +|+.|+|||.+.++      .++.++|||||||++|||++|          +.||........ 
T Consensus       163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~-  241 (301)
T 3q4u_A          163 HSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP-  241 (301)
T ss_dssp             EETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC-
T ss_pred             cccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCc-
Confidence                            06789999999876      445799999999999999999          788754332221 


Q ss_pred             cHHHHHHHHHHhhhhhcccccCCC-----chhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          207 YLLDWLGSYLKRARKLNGASCSKF-----GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       207 ~l~~~~~~~~~~~~~~~~~~~~~l-----~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      .... .....     ......+.+     ....+..+.+++..|+ +.||.+||++.+|++.|+.+
T Consensus       242 ~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl-~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          242 SFED-MRKVV-----CVDQQRPNIPNRWFSDPTLTSLAKLMKECW-YQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             CHHH-HHHHH-----TTSCCCCCCCGGGGGSHHHHHHHHHHHHHC-CSSGGGSCCHHHHHHHHHHH
T ss_pred             chhh-hhHHH-----hccCCCCCCChhhccCccHHHHHHHHHHHh-hcChhhCCCHHHHHHHHhcc
Confidence            1111 11111     111122222     2335568999999999 99999999999999999764

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.92  E-value=1.2e-24  Score=200.50  Aligned_cols=160  Identities=18%  Similarity=0.197  Sum_probs=120.8

Q ss_pred             cCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----------
Q 045092           92 SENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----------  159 (307)
Q Consensus        92 ~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----------  159 (307)
                      ..+.||+|+||.||+|.. .+|+.||||+++.......+.+.+|+.++.+++|+||+++++++.+....           
T Consensus        93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~  172 (373)
T 2x4f_A           93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE  172 (373)
T ss_dssp             EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred             cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence            356899999999999995 47899999999876666677899999999999999999999988764110           


Q ss_pred             ------------------------------------------------------------------------------Cc
Q 045092          160 ------------------------------------------------------------------------------PI  161 (307)
Q Consensus       160 ------------------------------------------------------------------------------t~  161 (307)
                                                                                                    |+
T Consensus       173 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~  252 (373)
T 2x4f_A          173 LFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTP  252 (373)
T ss_dssp             EHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCCSSC
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccccCCC
Confidence                                                                                          77


Q ss_pred             cccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHH
Q 045092          162 VYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDG  241 (307)
Q Consensus       162 ~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l  241 (307)
                      .|+|||++..+.++.++|||||||++|||++|+.||.....      .+.+.......    ..........++..+.++
T Consensus       253 ~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~------~~~~~~i~~~~----~~~~~~~~~~~~~~~~~l  322 (373)
T 2x4f_A          253 EFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND------AETLNNILACR----WDLEDEEFQDISEEAKEF  322 (373)
T ss_dssp             TTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHHTC----CCSCSGGGTTSCHHHHHH
T ss_pred             cEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhcc----CCCChhhhccCCHHHHHH
Confidence            89999999999999999999999999999999999964322      11122222111    011111123456689999


Q ss_pred             hccccCCCCCCCCCCHHHHHH
Q 045092          242 NDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       242 ~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      +..|+ +.||.+||++.++++
T Consensus       323 i~~~L-~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          323 ISKLL-IKEKSWRISASEALK  342 (373)
T ss_dssp             HHTTS-CSSGGGSCCHHHHHH
T ss_pred             HHHHc-CCChhhCCCHHHHhc
Confidence            99999 999999999999986

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.92  E-value=2.8e-25  Score=196.71  Aligned_cols=168  Identities=17%  Similarity=0.277  Sum_probs=128.3

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CC-------CEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DG-------KVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~-------~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  158 (307)
                      .++|...+.||+|+||.||+|... ++       ..||+|.+........+.+.+|+.++.+++|+||+++++++.+...
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE   86 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence            457888999999999999999843 33       4799999976666667789999999999999999999999876521


Q ss_pred             C-------------------------------------------------------------------------------
Q 045092          159 Q-------------------------------------------------------------------------------  159 (307)
Q Consensus       159 ~-------------------------------------------------------------------------------  159 (307)
                      .                                                                               
T Consensus        87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg  166 (289)
T 4fvq_A           87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG  166 (289)
T ss_dssp             CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCC
T ss_pred             CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCc
Confidence            1                                                                               


Q ss_pred             -------------Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhccc
Q 045092          160 -------------PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGA  225 (307)
Q Consensus       160 -------------t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  225 (307)
                                   |+.|+|||.+.+ ..++.++||||||+++|||++|..|+.....  .   .. .......       
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~--~---~~-~~~~~~~-------  233 (289)
T 4fvq_A          167 ISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD--S---QR-KLQFYED-------  233 (289)
T ss_dssp             SCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC--H---HH-HHHHHHT-------
T ss_pred             ccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc--h---HH-HHHHhhc-------
Confidence                         778999999987 7799999999999999999996555432211  1   11 1111111       


Q ss_pred             ccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          226 SCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       226 ~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                       ...++...+..+.+++..|+ +.||.+||++.++++.|+....
T Consensus       234 -~~~~~~~~~~~l~~li~~~l-~~dp~~Rps~~~ll~~l~~l~~  275 (289)
T 4fvq_A          234 -RHQLPAPKAAELANLINNCM-DYEPDHRPSFRAIIRDLNSLFT  275 (289)
T ss_dssp             -TCCCCCCSSCTTHHHHHHHS-CSSGGGSCCHHHHHHHHHTCC-
T ss_pred             -cCCCCCCCCHHHHHHHHHHc-CCChhHCcCHHHHHHHHHHhcC
Confidence             11222333457889999999 9999999999999999988643

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.92  E-value=8e-25  Score=194.18  Aligned_cols=163  Identities=17%  Similarity=0.222  Sum_probs=124.6

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      ++|.....||+|+||.||+|.. .+++.||||.+........+.+.+|+.++..++|+||+++++++......       
T Consensus        22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  101 (295)
T 2clq_A           22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV  101 (295)
T ss_dssp             CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence            3455556899999999999995 47889999999776555667899999999999999999999988654100       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~  181 (295)
T 2clq_A          102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE  181 (295)
T ss_dssp             SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----C
T ss_pred             CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCccc
Confidence                                                                                            


Q ss_pred             ----CccccchhhhccCC--CCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchh
Q 045092          160 ----PIVYMAPEYAKHGY--LTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFK  233 (307)
Q Consensus       160 ----t~~y~aPE~~~~~~--~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  233 (307)
                          |+.|+|||.+.++.  ++.++||||||+++|||++|+.||........    . ..   ..   ......+.++..
T Consensus       182 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~-~~---~~---~~~~~~~~~~~~  250 (295)
T 2clq_A          182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA----A-MF---KV---GMFKVHPEIPES  250 (295)
T ss_dssp             CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH----H-HH---HH---HHHCCCCCCCTT
T ss_pred             ccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH----H-HH---hh---cccccccccccc
Confidence                67899999987654  88999999999999999999999963221110    0 00   00   111223445556


Q ss_pred             hHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          234 FYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       234 ~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ++..+.+++..|+ +.||++||++.++++
T Consensus       251 ~~~~~~~li~~~l-~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          251 MSAEAKAFILKCF-EPDPDKRACANDLLV  278 (295)
T ss_dssp             SCHHHHHHHHHTT-CSSTTTSCCHHHHHT
T ss_pred             CCHHHHHHHHHHc-cCChhhCCCHHHHhc
Confidence            7778999999999 999999999999975

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.92  E-value=4.9e-25  Score=203.64  Aligned_cols=171  Identities=22%  Similarity=0.304  Sum_probs=133.5

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEEc--------CCCEEEEEEccCC-ChhcHHHHHHHHHHHhhC-CCCCccceeeeeec
Q 045092           86 ATNNFASENEISERGFGPVYRGLLA--------DGKVIEVKQLSSK-SKQGNREIVNEIGMISAL-QHPNLVKLYRLCTE  155 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~~--------~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~  155 (307)
                      ..++|.+.+.||+|+||.||+|...        .+..||||+++.. .......+.+|++++.++ +|+||+++++++..
T Consensus        67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~  146 (382)
T 3tt0_A           67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ  146 (382)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence            3578899999999999999999842        2357999999754 334457899999999999 99999999998765


Q ss_pred             CCC--------------------------------------C--------------------------------------
Q 045092          156 TLK--------------------------------------Q--------------------------------------  159 (307)
Q Consensus       156 ~~~--------------------------------------~--------------------------------------  159 (307)
                      ...                                      .                                      
T Consensus       147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~  226 (382)
T 3tt0_A          147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE  226 (382)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred             CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcC
Confidence            410                                      0                                      


Q ss_pred             -----------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHH
Q 045092          160 -----------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLL  209 (307)
Q Consensus       160 -----------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~  209 (307)
                                                   |+.|+|||++.++.++.++|||||||+++||++ |+.||.....      .
T Consensus       227 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~------~  300 (382)
T 3tt0_A          227 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV------E  300 (382)
T ss_dssp             TCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH------H
T ss_pred             CCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH------H
Confidence                                         467999999999999999999999999999999 9999953321      1


Q ss_pred             HHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccccc
Q 045092          210 DWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAEV  270 (307)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~v  270 (307)
                      + +...+.      ....+..+..++..+.+++..|+ +.||++||++.+|++.|+.+...
T Consensus       301 ~-~~~~~~------~~~~~~~~~~~~~~l~~li~~~l-~~dP~~Rps~~ell~~L~~~~~~  353 (382)
T 3tt0_A          301 E-LFKLLK------EGHRMDKPSNCTNELYMMMRDCW-HAVPSQRPTFKQLVEDLDRIVAL  353 (382)
T ss_dssp             H-HHHHHH------TTCCCCCCSSCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             H-HHHHHH------cCCCCCCCccCCHHHHHHHHHHc-CCChhhCcCHHHHHHHHHHHHHH
Confidence            1 112222      22223334456678999999999 99999999999999999876543

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.92  E-value=4e-25  Score=202.96  Aligned_cols=166  Identities=19%  Similarity=0.212  Sum_probs=128.4

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      .++|...+.||+|+||.||+|... +++.||||++...  .....+.+.+|+.++.+++||||+++++++.+...     
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            578999999999999999999954 7899999998654  23345678999999999999999999998865411     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       108 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~  187 (362)
T 2bdw_A          108 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW  187 (362)
T ss_dssp             CCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSC
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCccc
Confidence                                                                                            


Q ss_pred             ----CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          159 ----QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       159 ----~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                          +|+.|+|||++.++.++.++|||||||++|||++|+.||.....      .. +...+..+.  .. ........+
T Consensus       188 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~------~~-~~~~i~~~~--~~-~~~~~~~~~  257 (362)
T 2bdw_A          188 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ------HR-LYAQIKAGA--YD-YPSPEWDTV  257 (362)
T ss_dssp             CCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HH-HHHHHHHTC--CC-CCTTGGGGS
T ss_pred             ccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH------HH-HHHHHHhCC--CC-CCcccccCC
Confidence                07889999999998999999999999999999999999964321      11 111222211  11 111111345


Q ss_pred             HHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      +..+.+++..|+ +.||.+||++.++++.
T Consensus       258 ~~~~~~li~~~L-~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          258 TPEAKSLIDSML-TVNPKKRITADQALKV  285 (362)
T ss_dssp             CHHHHHHHHHHS-CSSGGGSCCHHHHTTS
T ss_pred             CHHHHHHHHHHc-CCChhhCcCHHHHhcC
Confidence            568999999999 9999999999998753

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.92  E-value=1.8e-25  Score=204.26  Aligned_cols=164  Identities=16%  Similarity=0.162  Sum_probs=125.5

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC-----ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC--
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK-----SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK--  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~--  158 (307)
                      .+.|...+.||+|+||.||+|.. .+++.||||++...     .....+.+.+|+.++..++||||+++++++.+...  
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  102 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY  102 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            35689999999999999999995 47899999998532     11235689999999999999999999998765410  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~  182 (351)
T 3c0i_A          103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ  182 (351)
T ss_dssp             EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEE
T ss_pred             EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeE
Confidence                                                                                            


Q ss_pred             ------------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccc
Q 045092          159 ------------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGAS  226 (307)
Q Consensus       159 ------------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  226 (307)
                                  +|+.|+|||.+.++.++.++|||||||++|||++|+.||....    .   . +...+..+.   ...
T Consensus       183 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~----~---~-~~~~i~~~~---~~~  251 (351)
T 3c0i_A          183 LGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK----E---R-LFEGIIKGK---YKM  251 (351)
T ss_dssp             CCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH----H---H-HHHHHHHTC---CCC
T ss_pred             ecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH----H---H-HHHHHHcCC---CCC
Confidence                        0778999999999999999999999999999999999996421    1   1 111111111   011


Q ss_pred             cCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          227 CSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       227 ~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .+.....++..+.+++..|+ +.||++||++.++++
T Consensus       252 ~~~~~~~~s~~~~~li~~~L-~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          252 NPRQWSHISESAKDLVRRML-MLDPAERITVYEALN  286 (351)
T ss_dssp             CHHHHTTSCHHHHHHHHHHT-CSSTTTSCCHHHHHT
T ss_pred             CccccccCCHHHHHHHHHHC-CCChhHCcCHHHHhc
Confidence            11111234568899999999 999999999999975

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.92  E-value=3.1e-25  Score=198.90  Aligned_cols=174  Identities=23%  Similarity=0.342  Sum_probs=131.0

Q ss_pred             HHHHHHhcCcccCCcccCCCCeeEEEEEEc----CCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeee
Q 045092           81 RQIKAATNNFASENEISERGFGPVYRGLLA----DGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCT  154 (307)
Q Consensus        81 ~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~  154 (307)
                      .++....++|...+.||+|+||.||+|...    ++..||||.+...  .....+.+.+|+.++.+++||||+++++++.
T Consensus        27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~  106 (313)
T 3brb_A           27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI  106 (313)
T ss_dssp             TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred             HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence            334445678899999999999999999853    3458999998744  3344567999999999999999999999875


Q ss_pred             cCCC-------------------------------C--------------------------------------------
Q 045092          155 ETLK-------------------------------Q--------------------------------------------  159 (307)
Q Consensus       155 ~~~~-------------------------------~--------------------------------------------  159 (307)
                      +...                               .                                            
T Consensus       107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~  186 (313)
T 3brb_A          107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTV  186 (313)
T ss_dssp             C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCE
T ss_pred             eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcE
Confidence            4210                               0                                            


Q ss_pred             -------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHH
Q 045092          160 -------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLG  213 (307)
Q Consensus       160 -------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~  213 (307)
                                               ++.|+|||.+.+..++.++||||||+++|||++ |+.||.......   +..   
T Consensus       187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~~~---  260 (313)
T 3brb_A          187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE---MYD---  260 (313)
T ss_dssp             EECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHH---
T ss_pred             EEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH---HHH---
Confidence                                     567999999999999999999999999999999 888986433221   111   


Q ss_pred             HHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          214 SYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       214 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                       .      +.....+..+..++..+.+++..|+ +.||.+||++.++++.|+...
T Consensus       261 -~------~~~~~~~~~~~~~~~~l~~li~~~l-~~dp~~Rps~~~l~~~L~~l~  307 (313)
T 3brb_A          261 -Y------LLHGHRLKQPEDCLDELYEIMYSCW-RTDPLDRPTFSVLRLQLEKLL  307 (313)
T ss_dssp             -H------HHTTCCCCCBTTCCHHHHHHHHHTT-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             -H------HHcCCCCCCCccccHHHHHHHHHHc-CCChhhCcCHHHHHHHHHHHH
Confidence             1      1111223344556678999999999 999999999999999988753

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.92  E-value=5.8e-25  Score=195.89  Aligned_cols=163  Identities=20%  Similarity=0.218  Sum_probs=120.0

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCCh--------------------------hcHHHHHHHHHHHh
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSK--------------------------QGNREIVNEIGMIS  139 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~--------------------------~~~~~~~~E~~~l~  139 (307)
                      .++|...+.||+|+||.||+|.. .+++.||||.+.....                          ...+.+.+|++++.
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            46789999999999999999995 4788999999864421                          11346899999999


Q ss_pred             hCCCCCccceeeeeecCCCC------------------------------------------------------------
Q 045092          140 ALQHPNLVKLYRLCTETLKQ------------------------------------------------------------  159 (307)
Q Consensus       140 ~l~h~niv~l~g~~~~~~~~------------------------------------------------------------  159 (307)
                      +++||||+++++++.+....                                                            
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~  171 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG  171 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEC
Confidence            99999999999998752110                                                            


Q ss_pred             ----------------------------CccccchhhhccCC---CCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccH
Q 045092          160 ----------------------------PIVYMAPEYAKHGY---LTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYL  208 (307)
Q Consensus       160 ----------------------------t~~y~aPE~~~~~~---~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l  208 (307)
                                                  |+.|+|||.+.+..   ++.++|||||||++|||++|+.||.....      
T Consensus       172 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~------  245 (298)
T 2zv2_A          172 EDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI------  245 (298)
T ss_dssp             TTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH------
T ss_pred             CCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH------
Confidence                                        77899999987655   47889999999999999999999953221      


Q ss_pred             HHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          209 LDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .. +...+....     ........++..+.+++..|+ +.||++||++.++++
T Consensus       246 ~~-~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l-~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          246 MC-LHSKIKSQA-----LEFPDQPDIAEDLKDLITRML-DKNPESRIVVPEIKL  292 (298)
T ss_dssp             HH-HHHHHHHCC-----CCCCSSSCCCHHHHHHHHHHT-CSCTTTSCCHHHHTT
T ss_pred             HH-HHHHHhccc-----CCCCCccccCHHHHHHHHHHh-hcChhhCCCHHHHhc
Confidence            11 111111111     111112345668999999999 999999999999864

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.92  E-value=1.8e-25  Score=198.53  Aligned_cols=169  Identities=22%  Similarity=0.303  Sum_probs=130.1

Q ss_pred             HHhcCcccCC-cccCCCCeeEEEEEE---cCCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC
Q 045092           85 AATNNFASEN-EISERGFGPVYRGLL---ADGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK  158 (307)
Q Consensus        85 ~~t~~f~~~~-~lG~G~~g~Vy~~~~---~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  158 (307)
                      ...++|...+ .||+|+||.||+|..   .+++.||||.+....  ....+.+.+|+.++.+++|+||+++++++.....
T Consensus        13 ~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   92 (291)
T 1xbb_A           13 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESW   92 (291)
T ss_dssp             CCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSE
T ss_pred             ecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCCCc
Confidence            3456777777 999999999999963   246789999987543  2235689999999999999999999999854310


Q ss_pred             C-------------------------------------------------------------------------------
Q 045092          159 Q-------------------------------------------------------------------------------  159 (307)
Q Consensus       159 ~-------------------------------------------------------------------------------  159 (307)
                      .                                                                               
T Consensus        93 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  172 (291)
T 1xbb_A           93 MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN  172 (291)
T ss_dssp             EEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCS
T ss_pred             EEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCC
Confidence            0                                                                               


Q ss_pred             ----------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccC
Q 045092          160 ----------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCS  228 (307)
Q Consensus       160 ----------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  228 (307)
                                |+.|+|||.+.+..++.++||||||+++|||++ |+.||.......       +...+.      ....+
T Consensus       173 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-------~~~~~~------~~~~~  239 (291)
T 1xbb_A          173 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-------VTAMLE------KGERM  239 (291)
T ss_dssp             EEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-------HHHHHH------TTCCC
T ss_pred             cccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-------HHHHHH------cCCCC
Confidence                      467999999998889999999999999999999 999996432211       111121      12223


Q ss_pred             CCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          229 KFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       229 ~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      ..+..++..+.+++..|+ +.||.+||++.++++.|+..
T Consensus       240 ~~~~~~~~~l~~li~~~l-~~dp~~Rps~~~l~~~L~~~  277 (291)
T 1xbb_A          240 GCPAGCPREMYDLMNLCW-TYDVENRPGFAAVELRLRNY  277 (291)
T ss_dssp             CCCTTCCHHHHHHHHHHT-CSSTTTSCCHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHc-CCChhhCcCHHHHHHHHHHH
Confidence            344566778999999999 99999999999999999874

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.92  E-value=1.7e-25  Score=202.00  Aligned_cols=169  Identities=20%  Similarity=0.302  Sum_probs=129.2

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCE----EEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKV----IEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~----vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-  159 (307)
                      .++|...+.||+|+||.||+|... ++..    ||+|.+.... ......+.+|+.++.+++|+||++++++|.+.... 
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL   91 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSSEEE
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCccEE
Confidence            357888899999999999999953 4543    8888875432 23345688899999999999999999988653100 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~  171 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ  171 (325)
T ss_dssp             EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTC
T ss_pred             EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCccccc
Confidence                                                                                            


Q ss_pred             --------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC
Q 045092          160 --------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF  230 (307)
Q Consensus       160 --------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l  230 (307)
                              |+.|+|||.+.++.++.++|||||||++|||++ |+.||.......   +    ...+..      ......
T Consensus       172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~----~~~~~~------~~~~~~  238 (325)
T 3kex_A          172 LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE---V----PDLLEK------GERLAQ  238 (325)
T ss_dssp             CC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH---H----HHHHHT------TCBCCC
T ss_pred             ccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH---H----HHHHHc------CCCCCC
Confidence                    568999999999999999999999999999999 999996433221   1    111111      112223


Q ss_pred             chhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          231 GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       231 ~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                      +..++..+.+++..|+ +.||.+||++.++++.|+....
T Consensus       239 ~~~~~~~~~~li~~~l-~~dp~~Rps~~el~~~l~~~~~  276 (325)
T 3kex_A          239 PQICTIDVYMVMVKCW-MIDENIRPTFKELANEFTRMAR  276 (325)
T ss_dssp             CTTBCTTTTHHHHHHT-CSCTTTSCCHHHHHHHHHHHTT
T ss_pred             CCcCcHHHHHHHHHHc-CCChhhCcCHHHHHHHHHHHHh
Confidence            3345557889999999 9999999999999999987654

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.92  E-value=7.6e-25  Score=203.09  Aligned_cols=164  Identities=18%  Similarity=0.235  Sum_probs=124.2

Q ss_pred             cCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCC--CCCccceeeeeecCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGLLADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQ--HPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l~g~~~~~~~-----  158 (307)
                      ++|...+.||+|+||.||++...+++.||||++...  .....+.+.+|+.+|.+++  |+||+++++++.....     
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            458999999999999999999777899999998643  3445678999999999996  5999999998765410     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       136 E~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~~~~~~~  215 (390)
T 2zmd_A          136 ECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDS  215 (390)
T ss_dssp             ECCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEESSSCEEECCCSSSCCC---------CC
T ss_pred             ecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEECCeEEEEecCccccccCCCccccCCC
Confidence                                                                                            


Q ss_pred             --CCccccchhhhcc-----------CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhccc
Q 045092          159 --QPIVYMAPEYAKH-----------GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGA  225 (307)
Q Consensus       159 --~t~~y~aPE~~~~-----------~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  225 (307)
                        +|+.|+|||++.+           +.++.++|||||||++|||++|+.||.....     ....+...      +...
T Consensus       216 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-----~~~~~~~~------~~~~  284 (390)
T 2zmd_A          216 QVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAI------IDPN  284 (390)
T ss_dssp             SCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC-----HHHHHHHH------HCTT
T ss_pred             CCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH-----HHHHHHHH------hCcc
Confidence              1788999999865           4689999999999999999999999953221     11111111      1111


Q ss_pred             ccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          226 SCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       226 ~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ....++...+..+.+++..|+ +.||.+||++.++++.
T Consensus       285 ~~~~~~~~~~~~~~~li~~~L-~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          285 HEIEFPDIPEKDLQDVLKCCL-KRDPKQRISIPELLAH  321 (390)
T ss_dssp             SCCCCCCCSCHHHHHHHHHHT-CSSTTTSCCHHHHHTS
T ss_pred             ccCCCCccchHHHHHHHHHHc-ccChhhCCCHHHHhhC
Confidence            122233334568899999999 9999999999999863

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.92  E-value=8.8e-25  Score=197.37  Aligned_cols=175  Identities=20%  Similarity=0.248  Sum_probs=132.7

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-----cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           87 TNNFASENEISERGFGPVYRGLL-----ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      .++|...+.||+|+||.||++..     .+++.||||++........+.+.+|+.++.+++|+||+++++++......  
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  119 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL  119 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence            35688889999999999999984     36889999999876666677899999999999999999999987543110  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~  199 (326)
T 2w1i_A          120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK  199 (326)
T ss_dssp             EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSC
T ss_pred             EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhccccc
Confidence                                                                                            


Q ss_pred             -----------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCc---------cCcccHHHHHHHHHHhh
Q 045092          160 -----------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTK---------EDKFYLLDWLGSYLKRA  219 (307)
Q Consensus       160 -----------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~---------~~~~~l~~~~~~~~~~~  219 (307)
                                 +..|+|||.+.+..++.++||||||++++||++|+.|+.....         .........+...+.  
T Consensus       200 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  277 (326)
T 2w1i_A          200 EYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK--  277 (326)
T ss_dssp             SEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHH--
T ss_pred             cccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhh--
Confidence                       4459999999988899999999999999999999998853210         000011111111111  


Q ss_pred             hhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          220 RKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       220 ~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                          .......+..++..+.+++..|+ +.||.+||++.++++.|+.+.
T Consensus       278 ----~~~~~~~~~~~~~~l~~li~~cl-~~dP~~Rps~~el~~~L~~l~  321 (326)
T 2w1i_A          278 ----NNGRLPRPDGCPDEIYMIMTECW-NNNVNQRPSFRDLALRVDQIR  321 (326)
T ss_dssp             ----TTCCCCCCTTCCHHHHHHHHHHS-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             ----cCCCCCCCCcccHHHHHHHHHHc-CCChhhCcCHHHHHHHHHHHH
Confidence                11122334556778999999999 999999999999999998754

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=6.2e-25  Score=202.54  Aligned_cols=167  Identities=23%  Similarity=0.259  Sum_probs=127.7

Q ss_pred             CcccCCcccCCCCeeEEEEEEc--CC--CEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           89 NFASENEISERGFGPVYRGLLA--DG--KVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~--~~--~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      .|...+.||+|+||.||+|...  ++  ..||||.++.. .....+.|.+|+.++.+++||||++++++|......    
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv  169 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  169 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence            3666789999999999999953  22  36899998654 334567899999999999999999999987543111    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~  249 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS  249 (373)
T ss_dssp             EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-------------
T ss_pred             EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccccccccccccc
Confidence                                                                                            


Q ss_pred             ---------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC
Q 045092          160 ---------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK  229 (307)
Q Consensus       160 ---------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  229 (307)
                               |+.|+|||.+.++.++.++|||||||++|||++ |..||......+   +..    .+..+      ....
T Consensus       250 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~---~~~----~~~~~------~~~~  316 (373)
T 3c1x_A          250 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITV----YLLQG------RRLL  316 (373)
T ss_dssp             --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC---HHH----HHHTT------CCCC
T ss_pred             ccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH---HHH----HHHcC------CCCC
Confidence                     457999999999999999999999999999999 677775433222   111    11111      1222


Q ss_pred             CchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          230 FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       230 l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                      .+..++..+.+++..|| +.||.+||++.++++.|+.+..
T Consensus       317 ~p~~~~~~l~~li~~cl-~~dp~~RPs~~ell~~L~~i~~  355 (373)
T 3c1x_A          317 QPEYCPDPLYEVMLKCW-HPKAEMRPSFSELVSRISAIFS  355 (373)
T ss_dssp             CCTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHc-CCChhhCcCHHHHHHHHHHHHH
Confidence            23456678999999999 9999999999999999987654

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.91  E-value=1.2e-24  Score=196.35  Aligned_cols=169  Identities=22%  Similarity=0.348  Sum_probs=129.8

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE------cCCCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC
Q 045092           87 TNNFASENEISERGFGPVYRGLL------ADGKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  159 (307)
                      .++|...+.||+|+||.||+|..      .++..||||.+... .......+.+|+.++.+++|+||+++++++......
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  108 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence            46788899999999999999983      25678999999744 344556899999999999999999999988654211


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg  188 (327)
T 2yfx_A          109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG  188 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred             EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECccc
Confidence                                                                                            


Q ss_pred             -------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhh
Q 045092          160 -------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRA  219 (307)
Q Consensus       160 -------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~  219 (307)
                                         |+.|+|||.+.++.++.++||||||+++|||++ |+.||......      + +...+.. 
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~-~~~~~~~-  260 (327)
T 2yfx_A          189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ------E-VLEFVTS-  260 (327)
T ss_dssp             HHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------H-HHHHHHT-
T ss_pred             cccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH------H-HHHHHhc-
Confidence                               557999999999999999999999999999998 99998543211      1 1111111 


Q ss_pred             hhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          220 RKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       220 ~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                           ...+..+..++..+.+++..|+ +.||.+||++.++++.|.....
T Consensus       261 -----~~~~~~~~~~~~~l~~li~~~l-~~dp~~Rps~~~ll~~l~~~~~  304 (327)
T 2yfx_A          261 -----GGRMDPPKNCPGPVYRIMTQCW-QHQPEDRPNFAIILERIEYCTQ  304 (327)
T ss_dssp             -----TCCCCCCTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -----CCCCCCCCCCCHHHHHHHHHHh-cCChhhCcCHHHHHHHHHHHhc
Confidence                 1122334456678999999999 9999999999999999886543

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=1e-24  Score=197.05  Aligned_cols=164  Identities=16%  Similarity=0.168  Sum_probs=126.8

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      .++|...+.||+|+||.||+|... +++.||+|.+... ......+.+|+.++..++||||+++++++.+....      
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   82 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence            568999999999999999999954 6889999998654 33456789999999999999999999988654100      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~  162 (321)
T 1tki_A           83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL  162 (321)
T ss_dssp             CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEE
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcccc
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 ---PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 ---t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                         |+.|+|||.+.++.++.++|||||||++|||++|+.||.....      ........ .+.   ...+.......+.
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~-~~~---~~~~~~~~~~~s~  232 (321)
T 1tki_A          163 LFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN------QQIIENIM-NAE---YTFDEEAFKEISI  232 (321)
T ss_dssp             EESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHH-HTC---CCCCHHHHTTSCH
T ss_pred             ccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH------HHHHHHHH-cCC---CCCChhhhccCCH
Confidence               7789999999988899999999999999999999999964321      11111111 111   0111111123456


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ++.+++..|+ ..||.+|||+.|+++
T Consensus       233 ~~~~li~~~L-~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          233 EAMDFVDRLL-VKERKSRMTASEALQ  257 (321)
T ss_dssp             HHHHHHHTTS-CSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHc-CCChhHCcCHHHHhc
Confidence            8899999999 999999999999987

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.91  E-value=4.6e-25  Score=200.66  Aligned_cols=161  Identities=18%  Similarity=0.189  Sum_probs=126.1

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      .++|.+.+.||+|+||.||+|.. .+++.||||++....   ......+.+|+.+++.++||||+++++++......   
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   87 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV   87 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            36799999999999999999995 578999999986431   12245789999999999999999999988764210   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        88 ~E~~~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~  167 (336)
T 3h4j_B           88 IEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS  167 (336)
T ss_dssp             ECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCC
T ss_pred             EECCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCcccccc
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCCC-CchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 --PIVYMAPEYAKHGYL-TDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 --t~~y~aPE~~~~~~~-~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                        |+.|+|||.+.+..+ +.++|||||||++|+|++|+.||..........              ........++...+.
T Consensus       168 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~--------------~i~~~~~~~p~~~s~  233 (336)
T 3h4j_B          168 CGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK--------------KVNSCVYVMPDFLSP  233 (336)
T ss_dssp             TTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC--------------CCCSSCCCCCTTSCH
T ss_pred             cCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH--------------HHHcCCCCCcccCCH
Confidence              788999999987765 689999999999999999999996543222100              001111223445667


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .+.+++..|+ +.||.+|||+.|+++
T Consensus       234 ~~~~li~~~L-~~dP~~Rpt~~eil~  258 (336)
T 3h4j_B          234 GAQSLIRRMI-VADPMQRITIQEIRR  258 (336)
T ss_dssp             HHHHHHHTTS-CSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHc-CCChhHCcCHHHHHh
Confidence            8999999999 999999999999975

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.91  E-value=1.5e-24  Score=198.12  Aligned_cols=166  Identities=19%  Similarity=0.197  Sum_probs=122.2

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           86 ATNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      ..++|...+.||+|+||.||+|... +++.||||.++...  ..+.+.+|+.++.+++|+||+++++++.+....     
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  128 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE  128 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence            3578999999999999999999965 68899999987542  345788999999999999999999988764110     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       129 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~  208 (349)
T 2w4o_A          129 LVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK  208 (349)
T ss_dssp             CCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC------------
T ss_pred             eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcccccc
Confidence                                                                                            


Q ss_pred             ----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhH
Q 045092          160 ----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFY  235 (307)
Q Consensus       160 ----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  235 (307)
                          |+.|+|||++.+..++.++|||||||++|||++|+.||.......      .....+....   ...........+
T Consensus       209 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~------~~~~~i~~~~---~~~~~~~~~~~~  279 (349)
T 2w4o_A          209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ------FMFRRILNCE---YYFISPWWDEVS  279 (349)
T ss_dssp             ----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH------HHHHHHHTTC---CCCCTTTTTTSC
T ss_pred             cccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH------HHHHHHHhCC---CccCCchhhhCC
Confidence                778999999999999999999999999999999999996432211      1111121111   111112223456


Q ss_pred             HHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          236 RRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       236 ~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ..+.+++..|+ +.||++||++.++++.
T Consensus       280 ~~~~~li~~~L-~~dP~~Rpt~~e~l~h  306 (349)
T 2w4o_A          280 LNAKDLVRKLI-VLDPKKRLTTFQALQH  306 (349)
T ss_dssp             HHHHHHHHTTS-CSSGGGSCCHHHHHHS
T ss_pred             HHHHHHHHHHc-cCChhhCcCHHHHhcC
Confidence            68999999999 9999999999999873

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=1e-24  Score=197.81  Aligned_cols=170  Identities=21%  Similarity=0.300  Sum_probs=130.7

Q ss_pred             cCcccCCcccCCCCeeEEEEEEcC-----CCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           88 NNFASENEISERGFGPVYRGLLAD-----GKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~~-----~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      ++|...+.||+|+||.||+|....     +..||||.+.... ......+.+|+.++.+++|+||+++++++......  
T Consensus        44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  123 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI  123 (333)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence            457778999999999999998542     2359999997543 33456799999999999999999999988654110  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~  203 (333)
T 1mqb_A          124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA  203 (333)
T ss_dssp             EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC----------
T ss_pred             EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhcccccc
Confidence                                                                                            


Q ss_pred             ---------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC
Q 045092          160 ---------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK  229 (307)
Q Consensus       160 ---------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  229 (307)
                               |+.|+|||.+.++.++.++|||||||++|||++ |+.||.....      .+ +...+..      .....
T Consensus       204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~------~~-~~~~~~~------~~~~~  270 (333)
T 1mqb_A          204 TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN------HE-VMKAIND------GFRLP  270 (333)
T ss_dssp             -------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HH-HHHHHHT------TCCCC
T ss_pred             ccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH------HH-HHHHHHC------CCcCC
Confidence                     456999999999999999999999999999999 9999953321      11 1111111      11222


Q ss_pred             CchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccccc
Q 045092          230 FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAEVC  271 (307)
Q Consensus       230 l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~v~  271 (307)
                      .+..++..+.+++..|+ +.||.+||++.++++.|+......
T Consensus       271 ~~~~~~~~l~~li~~~l-~~~p~~Rps~~~l~~~L~~~~~~~  311 (333)
T 1mqb_A          271 TPMDCPSAIYQLMMQCW-QQERARRPKFADIVSILDKLIRAP  311 (333)
T ss_dssp             CCTTCBHHHHHHHHHHT-CSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred             CcccCCHHHHHHHHHHc-CCChhhCcCHHHHHHHHHHHHhcc
Confidence            33456678999999999 999999999999999998765443

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.91  E-value=1.2e-24  Score=193.93  Aligned_cols=173  Identities=20%  Similarity=0.236  Sum_probs=128.8

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-----cCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           88 NNFASENEISERGFGPVYRGLL-----ADGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-----~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      +.|+..+.||+|+||.||+|.+     .+++.||||++.... ....+.+.+|+.++.+++|+||+++++++......  
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            4578889999999999999984     368899999987543 33457899999999999999999999988754111  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  180 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK  180 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred             EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCC
Confidence                                                                                            


Q ss_pred             -----------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCC--------ccCcccHHHHHHHHHHhhh
Q 045092          160 -----------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRT--------KEDKFYLLDWLGSYLKRAR  220 (307)
Q Consensus       160 -----------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~--------~~~~~~l~~~~~~~~~~~~  220 (307)
                                 |..|+|||.+.+..++.++||||||++++||++|+.|+....        ..........+...     
T Consensus       181 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  255 (302)
T 4e5w_A          181 EYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT-----  255 (302)
T ss_dssp             CEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHH-----
T ss_pred             cceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHH-----
Confidence                       555999999999999999999999999999999999864211        00111111111111     


Q ss_pred             hhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          221 KLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       221 ~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                       +........+..++..+.+++..|+ +.||.+||++.++++.|+..
T Consensus       256 -~~~~~~~~~~~~~~~~l~~li~~~l-~~dp~~Rps~~~ll~~L~~l  300 (302)
T 4e5w_A          256 -LKEGKRLPCPPNCPDEVYQLMRKCW-EFQPSNRTSFQNLIEGFEAL  300 (302)
T ss_dssp             -HHTTCCCCCCTTCCHHHHHHHHHTT-CSSGGGSCCHHHHHHHHHHH
T ss_pred             -HhccCCCCCCCCCCHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHHH
Confidence             1222233344556778999999999 99999999999999999764

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.91  E-value=8.2e-25  Score=199.07  Aligned_cols=162  Identities=18%  Similarity=0.160  Sum_probs=128.2

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      .++|+..+.||+|+||.||++... +++.||||+++..   .......+.+|+.++..++||||+++++++.+....   
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   83 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence            468999999999999999999954 7899999998643   223456789999999999999999999988754110   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        84 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~  163 (337)
T 1o6l_A           84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK  163 (337)
T ss_dssp             EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBC
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCccc
Confidence                                                                                            


Q ss_pred             ----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhH
Q 045092          160 ----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFY  235 (307)
Q Consensus       160 ----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  235 (307)
                          |+.|+|||.+.++.++.++|||||||++|||++|+.||.....      .. +...+...       ...++..++
T Consensus       164 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~-~~~~i~~~-------~~~~p~~~s  229 (337)
T 1o6l_A          164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------ER-LFELILME-------EIRFPRTLS  229 (337)
T ss_dssp             CCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HH-HHHHHHHC-------CCCCCTTSC
T ss_pred             ccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH------HH-HHHHHHcC-------CCCCCCCCC
Confidence                7889999999999999999999999999999999999964321      11 11111111       123344566


Q ss_pred             HHHHHHhccccCCCCCCCCC-----CHHHHHHH
Q 045092          236 RRTSDGNDQCSSSVTPTNRP-----LMSFVVSM  263 (307)
Q Consensus       236 ~~~~~l~~~C~~~~dP~~RP-----s~~~vl~~  263 (307)
                      ..+.+++..|+ +.||.+||     ++.++++.
T Consensus       230 ~~~~~li~~lL-~~dP~~R~g~~~~~~~ei~~h  261 (337)
T 1o6l_A          230 PEAKSLLAGLL-KKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             HHHHHHHHHHT-CSSTTTSTTCSTTTHHHHHTS
T ss_pred             HHHHHHHHHHh-hcCHHHhcCCCCCCHHHHHcC
Confidence            78999999999 99999999     89998753

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.91  E-value=1.4e-24  Score=193.32  Aligned_cols=164  Identities=21%  Similarity=0.236  Sum_probs=125.9

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      .+.|+..+.||+|+||.||+|... ++..||+|.+........+.+.+|+.++.+++||||+++++++......      
T Consensus        18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   97 (302)
T 2j7t_A           18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF   97 (302)
T ss_dssp             GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred             ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence            567899999999999999999965 6899999999766666678899999999999999999999988754211      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  177 (302)
T 2j7t_A           98 CPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF  177 (302)
T ss_dssp             CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC----
T ss_pred             CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccccccccccc
Confidence                                                                                            


Q ss_pred             --Cccccchhhhc-----cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCch
Q 045092          160 --PIVYMAPEYAK-----HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGF  232 (307)
Q Consensus       160 --t~~y~aPE~~~-----~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  232 (307)
                        |+.|+|||++.     .+.++.++||||||++++||++|+.|+.....      ..........     .......+.
T Consensus       178 ~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~-----~~~~~~~~~  246 (302)
T 2j7t_A          178 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP------MRVLLKIAKS-----DPPTLLTPS  246 (302)
T ss_dssp             -CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHS-----CCCCCSSGG
T ss_pred             cCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH------HHHHHHHhcc-----CCcccCCcc
Confidence              77899999883     66789999999999999999999999964321      1111111111     111111234


Q ss_pred             hhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          233 KFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       233 ~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .++..+.+++..|+ +.||.+||++.++++
T Consensus       247 ~~~~~l~~li~~~l-~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          247 KWSVEFRDFLKIAL-DKNPETRPSAAQLLE  275 (302)
T ss_dssp             GSCHHHHHHHHHHS-CSCTTTSCCHHHHTT
T ss_pred             ccCHHHHHHHHHHc-ccChhhCCCHHHHhc
Confidence            45668999999999 999999999999875

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.91  E-value=1.7e-24  Score=192.30  Aligned_cols=169  Identities=15%  Similarity=0.179  Sum_probs=123.9

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      ++|+..+.||+|+||.||+|... +++.||||++....  ......+.+|+.++.+++|+||+++++++.+....     
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            57889999999999999999964 78999999986442  23346789999999999999999999988654110     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  161 (292)
T 3o0g_A           82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAE  161 (292)
T ss_dssp             CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSC
T ss_pred             cCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccccccCC
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCC-CCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhh--------cc---c
Q 045092          160 --PIVYMAPEYAKHGY-LTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKL--------NG---A  225 (307)
Q Consensus       160 --t~~y~aPE~~~~~~-~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~--------~~---~  225 (307)
                        |+.|+|||.+.+.. ++.++|||||||+++||++|..|+.....  .   .+.+..........        ..   .
T Consensus       162 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~--~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~  236 (292)
T 3o0g_A          162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND--V---DDQLKRIFRLLGTPTEEQWPSMTKLPDY  236 (292)
T ss_dssp             CSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS--H---HHHHHHHHHHHCCCCTTTCTTGGGSTTC
T ss_pred             ccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC--H---HHHHHHHHHHhCCCChhhhhhhcccccc
Confidence              77899999998765 89999999999999999999888643221  1   11122221110000        00   0


Q ss_pred             ----------ccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          226 ----------SCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       226 ----------~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                                .........+..+.+++..|+ +.||++|||+.|+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L-~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLL-KCNPVQRISAEEALQ  282 (292)
T ss_dssp             CCCCCCCTTCCCTTTSTTCCHHHHHHHHHHS-CSSGGGSCCHHHHHT
T ss_pred             cccccccCCcchhhcccccChHHHHHHHHHh-ccChhhCCCHHHHhc
Confidence                      000111234557889999999 999999999999976

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=8.6e-25  Score=198.54  Aligned_cols=172  Identities=23%  Similarity=0.279  Sum_probs=131.5

Q ss_pred             HHhcCcccCCcccCCCCeeEEEEEE------cCCCEEEEEEccCC-ChhcHHHHHHHHHHHhhC-CCCCccceeeeeecC
Q 045092           85 AATNNFASENEISERGFGPVYRGLL------ADGKVIEVKQLSSK-SKQGNREIVNEIGMISAL-QHPNLVKLYRLCTET  156 (307)
Q Consensus        85 ~~t~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~  156 (307)
                      ...++|...+.||+|+||.||+|..      .++..||||.+... .....+.+.+|+.++.++ +||||+++++++...
T Consensus        42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  121 (344)
T 1rjb_A           42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS  121 (344)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence            3467899999999999999999995      24568999999754 233456899999999999 899999999987543


Q ss_pred             CC----------------------------------------------C-------------------------------
Q 045092          157 LK----------------------------------------------Q-------------------------------  159 (307)
Q Consensus       157 ~~----------------------------------------------~-------------------------------  159 (307)
                      ..                                              .                               
T Consensus       122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~  201 (344)
T 1rjb_A          122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAAR  201 (344)
T ss_dssp             SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGG
T ss_pred             CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChh
Confidence            10                                              0                               


Q ss_pred             -----------------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCcc
Q 045092          160 -----------------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKE  203 (307)
Q Consensus       160 -----------------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~  203 (307)
                                                         |+.|+|||.+.++.++.++|||||||++|||++ |+.||......
T Consensus       202 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~  281 (344)
T 1rjb_A          202 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD  281 (344)
T ss_dssp             GEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred             hEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcH
Confidence                                               557999999999999999999999999999998 99999644321


Q ss_pred             CcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          204 DKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       204 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                      .  .    ....+.      ....+..+..++..+.+++..|+ +.||.+||++.++++.|+....
T Consensus       282 ~--~----~~~~~~------~~~~~~~~~~~~~~l~~li~~~l-~~dp~~Rps~~~l~~~l~~~~~  334 (344)
T 1rjb_A          282 A--N----FYKLIQ------NGFKMDQPFYATEEIYIIMQSCW-AFDSRKRPSFPNLTSFLGCQLA  334 (344)
T ss_dssp             H--H----HHHHHH------TTCCCCCCTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHC-
T ss_pred             H--H----HHHHHh------cCCCCCCCCCCCHHHHHHHHHHc-CCCchhCcCHHHHHHHHHHHHH
Confidence            1  1    111111      12223334456678999999999 9999999999999999987543

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.91  E-value=8.8e-25  Score=192.52  Aligned_cols=168  Identities=15%  Similarity=0.284  Sum_probs=131.5

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      .++|...+.||+|+||.||++... +++.||+|.+...  .....+.+.+|+.++.+++|+||+++++++.+....    
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            468899999999999999999964 7899999998653  234456799999999999999999999977432000    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~  164 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR  164 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence                                                                                            


Q ss_pred             --------------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhccc
Q 045092          160 --------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGA  225 (307)
Q Consensus       160 --------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  225 (307)
                                    |+.|+|||.+.+..++.++||||||+++|||++|+.||.....      .+ +...+..+      
T Consensus       165 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~-~~~~i~~~------  231 (279)
T 2w5a_A          165 ILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ------KE-LAGKIREG------  231 (279)
T ss_dssp             HC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HH-HHHHHHHT------
T ss_pred             eeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH------HH-HHHHHhhc------
Confidence                          6779999999999999999999999999999999999964321      11 11122222      


Q ss_pred             ccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          226 SCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       226 ~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      ..+.++..++..+.+++..|+ +.||.+||++.++++.+....
T Consensus       232 ~~~~~~~~~~~~l~~li~~~l-~~~p~~Rps~~~ll~~~~~~~  273 (279)
T 2w5a_A          232 KFRRIPYRYSDELNEIITRML-NLKDYHRPSVEEILENPLILE  273 (279)
T ss_dssp             CCCCCCTTSCHHHHHHHHHHT-CSSGGGSCCHHHHHTSTTCCG
T ss_pred             ccccCCcccCHHHHHHHHHHc-CCCcccCCCHHHHHhChhhhh
Confidence            123344566778999999999 999999999999998775543

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.91  E-value=7.8e-25  Score=206.35  Aligned_cols=166  Identities=16%  Similarity=0.182  Sum_probs=126.7

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      .++|...+.||+|+||.||+|.. .+|+.||+|.+....  ....+.+.+|+.++.+++||||+++++++.+...     
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~   89 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF   89 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence            57799999999999999999985 478999999986543  2345678999999999999999999998865411     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        90 E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~  169 (444)
T 3soa_A           90 DLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA  169 (444)
T ss_dssp             CCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCB
T ss_pred             EeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCce
Confidence                                                                                            


Q ss_pred             -----CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchh
Q 045092          159 -----QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFK  233 (307)
Q Consensus       159 -----~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  233 (307)
                           +|+.|+|||.+.+..++.++||||+||++|+|++|+.||.....      .. +...+..+.  ... .......
T Consensus       170 ~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~------~~-~~~~i~~~~--~~~-~~~~~~~  239 (444)
T 3soa_A          170 WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ------HR-LYQQIKAGA--YDF-PSPEWDT  239 (444)
T ss_dssp             CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HH-HHHHHHHTC--CCC-CTTTTTT
T ss_pred             eecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH------HH-HHHHHHhCC--CCC-Ccccccc
Confidence                 07889999999998999999999999999999999999954321      11 112222221  111 1111134


Q ss_pred             hHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          234 FYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       234 ~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ++..+.+++..|+ +.||.+||++.|+++.
T Consensus       240 ~s~~~~~li~~~L-~~dP~~Rpta~e~L~h  268 (444)
T 3soa_A          240 VTPEAKDLINKML-TINPSKRITAAEALKH  268 (444)
T ss_dssp             SCHHHHHHHHHHS-CSSTTTSCCHHHHHHS
T ss_pred             CCHHHHHHHHHHc-CCChhHCCCHHHHhcC
Confidence            5668999999999 9999999999999863

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.91  E-value=1.2e-24  Score=192.21  Aligned_cols=165  Identities=19%  Similarity=0.219  Sum_probs=127.9

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      .++|...+.||+|+||.||+|... +++.||+|.+...  .....+.+.+|+.++.+++|+||+++++++......    
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            578999999999999999999954 6899999998643  333456789999999999999999999988654110    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        85 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~  164 (284)
T 3kk8_A           85 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW  164 (284)
T ss_dssp             CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBC
T ss_pred             ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccc
Confidence                                                                                            


Q ss_pred             -----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          160 -----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       160 -----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                           |+.|+|||.+.++.++.++||||||+++++|++|+.||......      . ....+..+.  .. ........+
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~------~-~~~~~~~~~--~~-~~~~~~~~~  234 (284)
T 3kk8_A          165 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH------R-LYAQIKAGA--YD-YPSPEWDTV  234 (284)
T ss_dssp             CCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------H-HHHHHHHTC--CC-CCTTTTTTS
T ss_pred             cCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh------H-HHHHHHhcc--cc-CCchhhccc
Confidence                 77899999999999999999999999999999999999543211      1 111111111  11 111112345


Q ss_pred             HHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      +..+.+++..|+ +.||.+||++.++++
T Consensus       235 ~~~~~~li~~~l-~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          235 TPEAKSLIDSML-TVNPKKRITADQALK  261 (284)
T ss_dssp             CHHHHHHHHHHS-CSSTTTSCCHHHHTT
T ss_pred             CHHHHHHHHHHc-ccChhhCCCHHHHhc
Confidence            668999999999 999999999999976

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.91  E-value=7.4e-25  Score=198.52  Aligned_cols=169  Identities=22%  Similarity=0.318  Sum_probs=131.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE--------cCCCEEEEEEccCC-ChhcHHHHHHHHHHHhhC-CCCCccceeeeeecC
Q 045092           87 TNNFASENEISERGFGPVYRGLL--------ADGKVIEVKQLSSK-SKQGNREIVNEIGMISAL-QHPNLVKLYRLCTET  156 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~--------~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~  156 (307)
                      .++|...+.||+|+||.||+|..        .++..||||++... .....+.+.+|+.++.++ +||||+++++++...
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  113 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  113 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence            57889999999999999999985        24678999999754 334456899999999999 899999999987643


Q ss_pred             CCC-----------------------------------------------------------------------------
Q 045092          157 LKQ-----------------------------------------------------------------------------  159 (307)
Q Consensus       157 ~~~-----------------------------------------------------------------------------  159 (307)
                      ...                                                                             
T Consensus       114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~  193 (334)
T 2pvf_A          114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN  193 (334)
T ss_dssp             SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT
T ss_pred             CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCC
Confidence            100                                                                             


Q ss_pred             ----------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHH
Q 045092          160 ----------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLD  210 (307)
Q Consensus       160 ----------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~  210 (307)
                                                  |+.|+|||.+.++.++.++||||||+++|||++ |+.||.....      .+
T Consensus       194 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~------~~  267 (334)
T 2pvf_A          194 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV------EE  267 (334)
T ss_dssp             CCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH------HH
T ss_pred             CCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH------HH
Confidence                                        466999999998899999999999999999999 9999964321      11


Q ss_pred             HHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          211 WLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                       +...+..      ...+..+..++..+.+++..|+ +.||.+||++.++++.|+.+..
T Consensus       268 -~~~~~~~------~~~~~~~~~~~~~l~~li~~~l-~~dp~~Rps~~ell~~L~~l~~  318 (334)
T 2pvf_A          268 -LFKLLKE------GHRMDKPANCTNELYMMMRDCW-HAVPSQRPTFKQLVEDLDRILT  318 (334)
T ss_dssp             -HHHHHHH------TCCCCCCTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -HHHHHhc------CCCCCCCccCCHHHHHHHHHHc-cCChhhCcCHHHHHHHHHHHHh
Confidence             1111211      1123334556678999999999 9999999999999999988654

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.91  E-value=1.8e-25  Score=200.81  Aligned_cols=158  Identities=20%  Similarity=0.222  Sum_probs=119.3

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC--ChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK--SKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~-----  158 (307)
                      ++|+..++||+|+||.||+|... +++.||||++...  .......+..|+..+.++ +|+||++++++|.+...     
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            67999999999999999999965 7899999998643  233344566677666666 99999999998865411     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       137 e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  216 (311)
T 3p1a_A          137 ELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQ  216 (311)
T ss_dssp             ECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC------CC
T ss_pred             eccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCCCccc
Confidence                                                                                            


Q ss_pred             -CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHH
Q 045092          159 -QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRR  237 (307)
Q Consensus       159 -~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  237 (307)
                       +|+.|+|||++.+ .++.++|||||||++|||++|..|+....     .     ...+.     .....+.+...++..
T Consensus       217 ~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~-----~-----~~~~~-----~~~~~~~~~~~~~~~  280 (311)
T 3p1a_A          217 EGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE-----G-----WQQLR-----QGYLPPEFTAGLSSE  280 (311)
T ss_dssp             CCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH-----H-----HHHHT-----TTCCCHHHHTTSCHH
T ss_pred             CCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc-----H-----HHHHh-----ccCCCcccccCCCHH
Confidence             0789999998875 79999999999999999999977663211     0     11111     111222223345568


Q ss_pred             HHHHhccccCCCCCCCCCCHHHHHH
Q 045092          238 TSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       238 ~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      +.+++..|+ +.||++||++.++++
T Consensus       281 l~~li~~~L-~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          281 LRSVLVMML-EPDPKLRATAEALLA  304 (311)
T ss_dssp             HHHHHHHHS-CSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHc-CCChhhCcCHHHHHh
Confidence            999999999 999999999999976

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.91  E-value=1.2e-24  Score=213.74  Aligned_cols=160  Identities=23%  Similarity=0.317  Sum_probs=127.0

Q ss_pred             CcccCCCCeeEEEEEEc---CCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---------
Q 045092           94 NEISERGFGPVYRGLLA---DGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---------  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~~---~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---------  159 (307)
                      +.||+|+||.||+|.+.   +++.||||+++...  ....+.|.+|+++|.+++|+|||+++++|......         
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~~g  454 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG  454 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEEccCCC
Confidence            47999999999999742   46789999997542  23457899999999999999999999998654100         


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       455 ~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~  534 (635)
T 4fl3_A          455 PLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW  534 (635)
T ss_dssp             EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------
T ss_pred             CHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCC
Confidence                                                                                            


Q ss_pred             CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHH
Q 045092          160 PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRT  238 (307)
Q Consensus       160 t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  238 (307)
                      |+.|+|||++.++.++.++|||||||++|||++ |+.||.......       +...+.      .......+..++..+
T Consensus       535 t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-------~~~~i~------~~~~~~~p~~~~~~l  601 (635)
T 4fl3_A          535 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-------VTAMLE------KGERMGCPAGCPREM  601 (635)
T ss_dssp             CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-------HHHHHH------TTCCCCCCTTCCHHH
T ss_pred             ceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHH------cCCCCCCCCCCCHHH
Confidence            567999999999999999999999999999998 999996433211       112222      222334455677799


Q ss_pred             HHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          239 SDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      .+++..|| +.||++||++.+|++.|++.
T Consensus       602 ~~li~~cl-~~dP~~RPs~~~l~~~L~~~  629 (635)
T 4fl3_A          602 YDLMNLCW-TYDVENRPGFAAVELRLRNY  629 (635)
T ss_dssp             HHHHHHHT-CSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHHHHc-CCCHhHCcCHHHHHHHHHHH
Confidence            99999999 99999999999999998864

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.91  E-value=1.8e-24  Score=194.71  Aligned_cols=173  Identities=19%  Similarity=0.234  Sum_probs=131.2

Q ss_pred             cccCCcccCCCCeeEEEEEEc-----CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           90 FASENEISERGFGPVYRGLLA-----DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~~-----~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      |...+.||+|+||.||++.+.     +++.||||+++... ....+.+.+|+.++.+++|+||+++++++.+....    
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            478899999999999998742     67889999997543 34456799999999999999999999998763111    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       113 v~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~  192 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR  192 (318)
T ss_dssp             EECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEE
T ss_pred             EEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccccccccccccc
Confidence                                                                                            


Q ss_pred             -------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccC--------cccHHHHHHHHHHhhhhhcc
Q 045092          160 -------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKED--------KFYLLDWLGSYLKRARKLNG  224 (307)
Q Consensus       160 -------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~--------~~~l~~~~~~~~~~~~~~~~  224 (307)
                             |..|+|||.+.+..++.++||||||++++||++|+.|+.......        ...-...+...      +..
T Consensus       193 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~  266 (318)
T 3lxp_A          193 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL------LER  266 (318)
T ss_dssp             C---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHH------HHT
T ss_pred             cccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHH------Hhc
Confidence                   555999999999899999999999999999999999985321110        00000001111      122


Q ss_pred             cccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          225 ASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       225 ~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                      ......+..++..+.+++..|+ +.||.+||++.++++.|+...+
T Consensus       267 ~~~~~~~~~~~~~l~~li~~~l-~~dP~~Rps~~ell~~L~~l~~  310 (318)
T 3lxp_A          267 GERLPRPDKCPAEVYHLMKNCW-ETEASFRPTFENLIPILKTVHE  310 (318)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccCCCCCccccHHHHHHHHHHc-CCCcccCcCHHHHHHHHHHHHH
Confidence            2233344566778999999999 9999999999999999987643

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.91  E-value=1.6e-24  Score=195.16  Aligned_cols=172  Identities=18%  Similarity=0.257  Sum_probs=111.8

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      .++|...+.||+|+||.||+|.. .+++.||||.++... ....+.+.+|+.++++++||||+++++++......     
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            46788999999999999999995 478999999987543 23456789999999999999999999987654100     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        84 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~  163 (317)
T 2pmi_A           84 FMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN  163 (317)
T ss_dssp             CCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCC
T ss_pred             ecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcc
Confidence                                                                                            


Q ss_pred             -------Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhh--------hhc
Q 045092          160 -------PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRAR--------KLN  223 (307)
Q Consensus       160 -------t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~--------~~~  223 (307)
                             |+.|+|||.+.+ ..++.++|||||||++|||++|+.||.......   ....+........        ...
T Consensus       164 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~  240 (317)
T 2pmi_A          164 TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE---QLKLIFDIMGTPNESLWPSVTKLP  240 (317)
T ss_dssp             CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCSCCTTTCGGGGGCT
T ss_pred             cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCCChhHhhhhhhhh
Confidence                   778999999876 468999999999999999999999996433211   1111111110000        000


Q ss_pred             ---------------ccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          224 ---------------GASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       224 ---------------~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                                     ....+......+..+.+++..|+ +.||++||++.|+++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L-~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          241 KYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLL-QLNPDMRLSAKQALH  293 (317)
T ss_dssp             TCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHS-CSSGGGSCCHHHHTT
T ss_pred             hcccccccccchhHHHhhcccccccCCHHHHHHHHHHC-CCCcccCCCHHHHhC
Confidence                           00011111234558899999999 999999999999875

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.91  E-value=1.8e-24  Score=195.59  Aligned_cols=173  Identities=25%  Similarity=0.301  Sum_probs=132.9

Q ss_pred             HHHHhcCcccCCcccCCCCeeEEEEEEc-CC-----CEEEEEEccCCC-hhcHHHHHHHHHHHhhC-CCCCccceeeeee
Q 045092           83 IKAATNNFASENEISERGFGPVYRGLLA-DG-----KVIEVKQLSSKS-KQGNREIVNEIGMISAL-QHPNLVKLYRLCT  154 (307)
Q Consensus        83 l~~~t~~f~~~~~lG~G~~g~Vy~~~~~-~~-----~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~  154 (307)
                      +....++|...+.||+|+||.||+|... ++     ..||||.+.... ....+.+.+|+.++.++ +||||+++++++.
T Consensus        41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~  120 (333)
T 2i1m_A           41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT  120 (333)
T ss_dssp             GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence            3344678999999999999999999953 22     479999997543 33456799999999999 8999999999876


Q ss_pred             cCCCC---------------------------------------------------------------------------
Q 045092          155 ETLKQ---------------------------------------------------------------------------  159 (307)
Q Consensus       155 ~~~~~---------------------------------------------------------------------------  159 (307)
                      .....                                                                           
T Consensus       121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~  200 (333)
T 2i1m_A          121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG  200 (333)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGG
T ss_pred             cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCC
Confidence            54110                                                                           


Q ss_pred             ----------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHH
Q 045092          160 ----------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLD  210 (307)
Q Consensus       160 ----------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~  210 (307)
                                                  |+.|+|||.+.++.++.++|||||||++|||++ |..||.......      
T Consensus       201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~------  274 (333)
T 2i1m_A          201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS------  274 (333)
T ss_dssp             GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH------
T ss_pred             CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH------
Confidence                                        457999999999999999999999999999999 999986433211      


Q ss_pred             HHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          211 WLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      ........      ......+...+..+.+++..|+ +.||.+||++.++++.|+...
T Consensus       275 ~~~~~~~~------~~~~~~~~~~~~~l~~li~~~l-~~~p~~Rps~~~l~~~L~~~~  325 (333)
T 2i1m_A          275 KFYKLVKD------GYQMAQPAFAPKNIYSIMQACW-ALEPTHRPTFQQICSFLQEQA  325 (333)
T ss_dssp             HHHHHHHH------TCCCCCCTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHhc------CCCCCCCCCCCHHHHHHHHHHh-ccChhhCcCHHHHHHHHHHHH
Confidence            11112211      1122233445668999999999 999999999999999987653

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.91  E-value=1.5e-24  Score=191.24  Aligned_cols=162  Identities=19%  Similarity=0.301  Sum_probs=127.7

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      .++|...+.||+|+||.||+|... ++..||||.+....   ......+.+|+.++.+++|+||+++++++.+....   
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            578999999999999999999954 67899999985432   22346789999999999999999999998765210   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        88 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~  167 (279)
T 3fdn_A           88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL  167 (279)
T ss_dssp             ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC--------
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCccccccc
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHH
Q 045092          160 --PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRR  237 (307)
Q Consensus       160 --t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  237 (307)
                        |+.|+|||.+.+..++.++||||||+++++|++|+.||.....      .. ....+..       ....++...+..
T Consensus       168 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~-~~~~~~~-------~~~~~~~~~~~~  233 (279)
T 3fdn_A          168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY------QE-TYKRISR-------VEFTFPDFVTEG  233 (279)
T ss_dssp             CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HH-HHHHHHH-------TCCCCCTTSCHH
T ss_pred             CCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH------HH-HHHHHHh-------CCCCCCCcCCHH
Confidence              7889999999999999999999999999999999999963321      11 1111111       122333445668


Q ss_pred             HHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          238 TSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       238 ~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      +.+++..|+ +.||.+||++.++++.
T Consensus       234 ~~~li~~~l-~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          234 ARDLISRLL-KHNPSQRPMLREVLEH  258 (279)
T ss_dssp             HHHHHHHHC-CSSGGGSCCHHHHHHC
T ss_pred             HHHHHHHHh-ccChhhCCCHHHHhhC
Confidence            899999999 9999999999999863

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.91  E-value=1e-24  Score=195.60  Aligned_cols=172  Identities=15%  Similarity=0.138  Sum_probs=128.8

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      .++|...+.||+|+||.||+|... +++.||||.+....   ....+.+.+|+.++.+++|+||+++++++......   
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD  112 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence            578999999999999999999954 78899999987542   22346789999999999999999999988654110   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       113 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~  192 (309)
T 2h34_A          113 MRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQL  192 (309)
T ss_dssp             EECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC------------
T ss_pred             EEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccccccc
Confidence                                                                                            


Q ss_pred             -----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          160 -----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       160 -----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                           |+.|+|||.+.++.++.++||||||+++|||++|+.||.....       ..+...+....    .........+
T Consensus       193 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~~~----~~~~~~~~~~  261 (309)
T 2h34_A          193 GNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL-------SVMGAHINQAI----PRPSTVRPGI  261 (309)
T ss_dssp             ----CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH-------HHHHHHHHSCC----CCGGGTSTTC
T ss_pred             cccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH-------HHHHHHhccCC----CCccccCCCC
Confidence                 6779999999999999999999999999999999999963221       11111111110    1111223445


Q ss_pred             HHHHHHHhccccCCCCCCCCC-CHHHHHHHhcccccc
Q 045092          235 YRRTSDGNDQCSSSVTPTNRP-LMSFVVSMLEDKAEV  270 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RP-s~~~vl~~L~~~~~v  270 (307)
                      +..+.+++..|+ +.||++|| ++.++++.|+.....
T Consensus       262 ~~~l~~li~~~l-~~dP~~Rp~s~~~l~~~l~~~l~~  297 (309)
T 2h34_A          262 PVAFDAVIARGM-AKNPEDRYVTCGDLSAAAHAALAT  297 (309)
T ss_dssp             CTHHHHHHHHHT-CSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred             CHHHHHHHHHhc-cCCHHHHHHhHHHHHHHHHHHHHh
Confidence            668999999999 99999999 999999999876443

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=3e-24  Score=190.73  Aligned_cols=167  Identities=22%  Similarity=0.262  Sum_probs=126.5

Q ss_pred             CcccCCcccCCCCeeEEEEEEc-CCC---EEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           89 NFASENEISERGFGPVYRGLLA-DGK---VIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~~-~~~---~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      .|...+.||+|+||.||+|... ++.   .||+|.+.... ....+.+.+|+.++++++|+||+++++++.+....    
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence            3556689999999999999843 333   79999987543 34457899999999999999999999998654211    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~  181 (298)
T 3pls_A          102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYS  181 (298)
T ss_dssp             ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGC
T ss_pred             EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccc
Confidence                                                                                            


Q ss_pred             ---------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC
Q 045092          160 ---------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF  230 (307)
Q Consensus       160 ---------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l  230 (307)
                               |+.|+|||.+.+..++.++||||||+++|||++|..|+.....  ...+..    .+      ........
T Consensus       182 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~--~~~~~~----~~------~~~~~~~~  249 (298)
T 3pls_A          182 VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID--PFDLTH----FL------AQGRRLPQ  249 (298)
T ss_dssp             SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC--GGGHHH----HH------HTTCCCCC
T ss_pred             cccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC--HHHHHH----Hh------hcCCCCCC
Confidence                     5679999999999999999999999999999996665532221  111111    11      11122233


Q ss_pred             chhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          231 GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       231 ~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      +..++..+.+++..|+ +.||.+||++.++++.|+...
T Consensus       250 ~~~~~~~l~~li~~~l-~~~p~~Rps~~~ll~~l~~~~  286 (298)
T 3pls_A          250 PEYCPDSLYQVMQQCW-EADPAVRPTFRVLVGEVEQIV  286 (298)
T ss_dssp             CTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             CccchHHHHHHHHHHc-cCChhhCcCHHHHHHHHHHHH
Confidence            4456678999999999 999999999999999998754

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.91  E-value=1.7e-24  Score=195.09  Aligned_cols=166  Identities=17%  Similarity=0.175  Sum_probs=127.4

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChh------cHHHHHHHHHHHhhCCCCCccceeeeeecCCC-
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQ------GNREIVNEIGMISALQHPNLVKLYRLCTETLK-  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-  158 (307)
                      .++|...+.||+|+||.||++... +++.||||.+......      ..+.+.+|+.++.+++||||+++++++.+... 
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   90 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV   90 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            467899999999999999999954 7899999998654221      35679999999999999999999998865410 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~  170 (321)
T 2a2a_A           91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE  170 (321)
T ss_dssp             EEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECC
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecC
Confidence                                                                                            


Q ss_pred             ---------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC
Q 045092          159 ---------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK  229 (307)
Q Consensus       159 ---------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  229 (307)
                               +|+.|+|||.+.++.++.++||||||++++||++|+.||......      +... .+...   ....++.
T Consensus       171 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~-~i~~~---~~~~~~~  240 (321)
T 2a2a_A          171 DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ------ETLA-NITSV---SYDFDEE  240 (321)
T ss_dssp             TTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHH-HHHTT---CCCCCHH
T ss_pred             ccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH------HHHH-HHHhc---ccccChh
Confidence                     067899999999999999999999999999999999999643211      1111 11111   1111111


Q ss_pred             CchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          230 FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       230 l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .....+..+.+++..|+ +.||.+||++.++++.
T Consensus       241 ~~~~~~~~~~~li~~~l-~~dp~~Rps~~e~l~h  273 (321)
T 2a2a_A          241 FFSHTSELAKDFIRKLL-VKETRKRLTIQEALRH  273 (321)
T ss_dssp             HHTTCCHHHHHHHHTTS-CSSTTTSCCHHHHHHS
T ss_pred             hhcccCHHHHHHHHHHc-CCChhhCcCHHHHhcC
Confidence            22334558899999999 9999999999999873

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.91  E-value=1.5e-24  Score=193.81  Aligned_cols=165  Identities=19%  Similarity=0.190  Sum_probs=126.4

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      .++|...+.||+|+||.||++... +++.||||.+........+.+.+|+.++.+++||||+++++++.+....      
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL   87 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence            467889999999999999999954 7899999999765444556789999999999999999999987654110      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        88 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~  167 (304)
T 2jam_A           88 VSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTA  167 (304)
T ss_dssp             CCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHHH
T ss_pred             CCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccccc
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHH
Q 045092          160 --PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRR  237 (307)
Q Consensus       160 --t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  237 (307)
                        |+.|+|||.+.++.++.++||||||++++||++|+.||.....      .. ....+..+.   ..........++..
T Consensus       168 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~-~~~~i~~~~---~~~~~~~~~~~~~~  237 (304)
T 2jam_A          168 CGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE------SK-LFEKIKEGY---YEFESPFWDDISES  237 (304)
T ss_dssp             HSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH------HH-HHHHHHHCC---CCCCTTTTTTSCHH
T ss_pred             cCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH------HH-HHHHHHcCC---CCCCccccccCCHH
Confidence              7789999999999999999999999999999999999964321      11 111222211   11122223445668


Q ss_pred             HHHHhccccCCCCCCCCCCHHHHHH
Q 045092          238 TSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       238 ~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      +.+++..|+ +.||.+||++.++++
T Consensus       238 ~~~li~~~l-~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          238 AKDFICHLL-EKDPNERYTCEKALS  261 (304)
T ss_dssp             HHHHHHHHH-CSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHc-CCChhHCcCHHHHhc
Confidence            999999999 999999999999986

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.91  E-value=1.4e-24  Score=192.37  Aligned_cols=163  Identities=20%  Similarity=0.241  Sum_probs=123.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      .++|...+.||+|+||.||++.. .++..||+|.+.... ....+.+.+|++++.+++||||+++++++.+....     
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  100 (285)
T 3is5_A           21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME  100 (285)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence            35688899999999999999995 478999999986543 33457899999999999999999999988654100     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~  180 (285)
T 3is5_A          101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD  180 (285)
T ss_dssp             CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----
T ss_pred             eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCc
Confidence                                                                                            


Q ss_pred             --------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCc
Q 045092          160 --------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFG  231 (307)
Q Consensus       160 --------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~  231 (307)
                              |+.|+|||.+. +.++.++||||||++++||++|+.||.....      .+ .......    .........
T Consensus       181 ~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~------~~-~~~~~~~----~~~~~~~~~  248 (285)
T 3is5_A          181 EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL------EE-VQQKATY----KEPNYAVEC  248 (285)
T ss_dssp             ------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HH-HHHHHHH----CCCCCCC--
T ss_pred             ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH------HH-HHhhhcc----CCccccccc
Confidence                    77899999875 5789999999999999999999999964321      11 1111111    111111111


Q ss_pred             hhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          232 FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       232 ~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ...+..+.+++..|+ +.||.+||++.|+++
T Consensus       249 ~~~~~~~~~li~~~L-~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          249 RPLTPQAVDLLKQML-TKDPERRPSAAQVLH  278 (285)
T ss_dssp             CCCCHHHHHHHHHHT-CSCTTTSCCHHHHHT
T ss_pred             CcCCHHHHHHHHHHc-cCChhhCcCHHHHhc
Confidence            224568889999999 999999999999975

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.91  E-value=3.6e-24  Score=202.92  Aligned_cols=173  Identities=15%  Similarity=0.131  Sum_probs=125.9

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      .++|...+.||+|+||.||+|.. .+++.||||++...  .....+.+.+|+.+++.++|+||+++++++.....     
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            57899999999999999999984 47899999998754  33445678999999999999999999998754311     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       141 ~~~lv~E~~~~~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  220 (464)
T 3ttj_A          141 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM  220 (464)
T ss_dssp             EEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CCCC
T ss_pred             eEEEEEeCCCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCccc
Confidence                                                                                            


Q ss_pred             ----CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHH------------------
Q 045092          159 ----QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYL------------------  216 (307)
Q Consensus       159 ----~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~------------------  216 (307)
                          +|+.|+|||++.+..++.++|||||||+++||++|+.||......+   ....+...+                  
T Consensus       221 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~---~~~~i~~~lg~p~~~~~~~~~~~~~~~  297 (464)
T 3ttj_A          221 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID---QWNKVIEQLGTPCPEFMKKLQPTVRNY  297 (464)
T ss_dssp             ----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHHHCSCCHHHHTTSCHHHHHH
T ss_pred             CCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHhcCCCCHHHHHHcchhhhhH
Confidence                0788999999999999999999999999999999999996433211   111010000                  


Q ss_pred             -Hhhhhhcc-----ccc----CC---CchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          217 -KRARKLNG-----ASC----SK---FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       217 -~~~~~~~~-----~~~----~~---l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                       ........     ...    +.   .....+..+.+++.+|+ ..||.+|||+.|+++.
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL-~~dP~~R~ta~e~L~H  356 (464)
T 3ttj_A          298 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML-VIDPAKRISVDDALQH  356 (464)
T ss_dssp             HTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHS-CSSTTTSCCHHHHHTS
T ss_pred             hhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHc-CCChhhCCCHHHHhcC
Confidence             00000000     000    00   00011346899999999 9999999999999863

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.91  E-value=1.2e-24  Score=193.38  Aligned_cols=173  Identities=11%  Similarity=0.136  Sum_probs=131.3

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC------
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK------  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~------  158 (307)
                      .++|...+.||+|+||.||+|.. .+++.||||.+....  ....+.+|+.++.++ +|+|++++++++.....      
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   86 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   86 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence            35799999999999999999995 578999999986442  234688899999999 89999999988765410      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        87 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~  166 (298)
T 1csn_A           87 LLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVT  166 (298)
T ss_dssp             CCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTT
T ss_pred             ecCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccc
Confidence                                                                                            


Q ss_pred             -------------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhccc
Q 045092          159 -------------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGA  225 (307)
Q Consensus       159 -------------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  225 (307)
                                   +|+.|+|||.+.+..++.++||||||+++|||++|+.||..............+    ....  ...
T Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~----~~~~--~~~  240 (298)
T 1csn_A          167 KQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERI----GEKK--QST  240 (298)
T ss_dssp             CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHH----HHHH--HHS
T ss_pred             cccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHH----Hhhc--cCc
Confidence                         057799999999999999999999999999999999999754433322111111    1111  111


Q ss_pred             ccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          226 SCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       226 ~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      ..+.+...++..+.+++..|+ +.||++||++.+|++.|+...
T Consensus       241 ~~~~~~~~~~~~l~~li~~~l-~~dp~~RP~~~~l~~~l~~~~  282 (298)
T 1csn_A          241 PLRELCAGFPEEFYKYMHYAR-NLAFDATPDYDYLQGLFSKVL  282 (298)
T ss_dssp             CHHHHTTTSCHHHHHHHHHHH-HCCTTCCCCHHHHHHHHHHHH
T ss_pred             cHHHHHhhCcHHHHHHHHHHh-cCCcccCCCHHHHHHHHHHHH
Confidence            111122345668999999999 999999999999999988754

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.91  E-value=3e-24  Score=191.02  Aligned_cols=168  Identities=23%  Similarity=0.230  Sum_probs=126.7

Q ss_pred             cCcccCCcccCCCCeeEEEEEEcC----CCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           88 NNFASENEISERGFGPVYRGLLAD----GKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~~----~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      ..|...+.||+|+||.||+|...+    ...||+|.+... .....+.+.+|+.++++++|+||++++++|......   
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            457788999999999999998532    235899998754 334457899999999999999999999986543111   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~  184 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY  184 (298)
T ss_dssp             EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGC
T ss_pred             EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccchh
Confidence                                                                                            


Q ss_pred             ----------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccC
Q 045092          160 ----------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCS  228 (307)
Q Consensus       160 ----------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  228 (307)
                                |+.|+|||.+.+..++.++||||||++++||++ |.+|+.......   +..    .+      ......
T Consensus       185 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---~~~----~~------~~~~~~  251 (298)
T 3f66_A          185 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITV----YL------LQGRRL  251 (298)
T ss_dssp             BC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT---HHH----HH------HTTCCC
T ss_pred             ccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH---HHH----HH------hcCCCC
Confidence                      457999999999999999999999999999999 555554322211   111    11      111122


Q ss_pred             CCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          229 KFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       229 ~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                      ..+..++..+.+++..|+ +.||.+||++.++++.|+....
T Consensus       252 ~~~~~~~~~l~~li~~~l-~~~p~~Rps~~ell~~L~~~~~  291 (298)
T 3f66_A          252 LQPEYCPDPLYEVMLKCW-HPKAEMRPSFSELVSRISAIFS  291 (298)
T ss_dssp             CCCTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCccCCHHHHHHHHHHc-CCChhhCcCHHHHHHHHHHHHH
Confidence            223445668999999999 9999999999999999987643

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.91  E-value=5.2e-24  Score=190.58  Aligned_cols=176  Identities=19%  Similarity=0.257  Sum_probs=124.5

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh--hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK--QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      .++|...+.||+|+||.||+|... +++.||||++.....  ...+.+.+|+.++.+++|+||+++++++......    
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF   81 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence            367899999999999999999964 689999998865432  2346788999999999999999999998764210    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        82 e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  161 (311)
T 4agu_A           82 EYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDD  161 (311)
T ss_dssp             ECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC--------
T ss_pred             EeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCC
Confidence                                                                                            


Q ss_pred             ---Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHH--------HHHHHHhhhhhcccc-
Q 045092          160 ---PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDW--------LGSYLKRARKLNGAS-  226 (307)
Q Consensus       160 ---t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~~~-  226 (307)
                         |+.|+|||.+.+ ..++.++||||||++++||++|+.||..............        ............... 
T Consensus       162 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (311)
T 4agu_A          162 EVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKI  241 (311)
T ss_dssp             ----GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCC
T ss_pred             CcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcC
Confidence               677999999875 6789999999999999999999999964432221111000        000000000000000 


Q ss_pred             -cCCC-------chhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          227 -CSKF-------GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       227 -~~~l-------~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                       ++..       ....+..+.+++..|+ +.||.+|||+.++++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~li~~~L-~~dP~~Rpt~~ell~h  285 (311)
T 4agu_A          242 PDPEDMEPLELKFPNISYPALGLLKGCL-HMDPTERLTCEQLLHH  285 (311)
T ss_dssp             CCCSSCCCHHHHCTTCCHHHHHHHHHHC-CSSTTTSCCHHHHHTS
T ss_pred             CCccccchhhhhcccccHHHHHHHHHHc-cCChhhcCCHHHHhcC
Confidence             1100       0123447889999999 9999999999999863

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.91  E-value=1.1e-24  Score=197.04  Aligned_cols=172  Identities=11%  Similarity=0.079  Sum_probs=129.2

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC------
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK------  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~------  158 (307)
                      .++|...+.||+|+||.||+|.. .+++.||||.+.....  .+.+.+|+.++.++ +|+||+++++++.....      
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e   85 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE   85 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence            36789999999999999999995 5789999999865432  24688999999999 99999999988765410      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        86 ~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~  165 (330)
T 2izr_A           86 LLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPET  165 (330)
T ss_dssp             CCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTT
T ss_pred             eCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCC
Confidence                                                                                            


Q ss_pred             -------------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhccc
Q 045092          159 -------------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGA  225 (307)
Q Consensus       159 -------------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  225 (307)
                                   +|+.|+|||.+.+..++.++|||||||++|||++|+.||........   ....... .... .. .
T Consensus       166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~---~~~~~~i-~~~~-~~-~  239 (330)
T 2izr_A          166 KKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL---KERYQKI-GDTK-RA-T  239 (330)
T ss_dssp             CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH---HHHHHHH-HHHH-HH-S
T ss_pred             CccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH---HHHHHHH-Hhhh-cc-C
Confidence                         05789999999999999999999999999999999999975433322   2211111 1111 00 0


Q ss_pred             ccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          226 SCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       226 ~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      ....+...++ ++.+++..|+ +.||.+||++.+|.+.|++..
T Consensus       240 ~~~~~~~~~p-~~~~li~~~l-~~~p~~RP~~~~l~~~l~~~~  280 (330)
T 2izr_A          240 PIEVLCENFP-EMATYLRYVR-RLDFFEKPDYDYLRKLFTDLF  280 (330)
T ss_dssp             CHHHHTTTCH-HHHHHHHHHH-HCCTTCCCCHHHHHHHHHHHH
T ss_pred             CHHHHhccCh-HHHHHHHHHH-hCCCCCCCCHHHHHHHHHHHH
Confidence            0111122344 8999999999 999999999999999887543

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.91  E-value=1.3e-24  Score=193.92  Aligned_cols=163  Identities=21%  Similarity=0.322  Sum_probs=129.1

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      .+.|...+.||+|+||.||+|.. .+++.||||.+.... ....+.+.+|+.++.+++|+||+++++++......     
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  100 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME  100 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence            35688889999999999999985 478999999986543 34457899999999999999999999988654110     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       101 ~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  180 (303)
T 3a7i_A          101 YLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV  180 (303)
T ss_dssp             CCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCCCC
T ss_pred             eCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccccccCccC
Confidence                                                                                            


Q ss_pred             -CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHH
Q 045092          160 -PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRT  238 (307)
Q Consensus       160 -t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  238 (307)
                       |+.|+|||.+.++.++.++||||||++++||++|+.||......      ... ..      +.....+.+...++..+
T Consensus       181 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~-~~------~~~~~~~~~~~~~~~~l  247 (303)
T 3a7i_A          181 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM------KVL-FL------IPKNNPPTLEGNYSKPL  247 (303)
T ss_dssp             SCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHH-HH------HHHSCCCCCCSSCCHHH
T ss_pred             CCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH------HHH-HH------hhcCCCCCCccccCHHH
Confidence             67799999999999999999999999999999999999643211      111 11      11122334445667789


Q ss_pred             HHHhccccCCCCCCCCCCHHHHHHH
Q 045092          239 SDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .+++..|+ +.||.+||++.++++.
T Consensus       248 ~~li~~~l-~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          248 KEFVEACL-NKEPSFRPTAKELLKH  271 (303)
T ss_dssp             HHHHHHHC-CSSGGGSCCHHHHTTC
T ss_pred             HHHHHHHc-CCChhhCcCHHHHhhC
Confidence            99999999 9999999999999763

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.91  E-value=1.3e-24  Score=196.11  Aligned_cols=166  Identities=20%  Similarity=0.253  Sum_probs=117.5

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCC-CCCccceeeeeecCCC------
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQ-HPNLVKLYRLCTETLK------  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~------  158 (307)
                      ..+|...+.||+|+||.||+|.. .+++.||||++........+.+.+|+.++.++. |+||+++++++.....      
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~  106 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ  106 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence            45788899999999999999995 478999999987666666678999999999995 9999999988732100      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       107 ~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~  186 (337)
T 3ll6_A          107 AEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSAT  186 (337)
T ss_dssp             EEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCB
T ss_pred             ceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccce
Confidence                                                                                            


Q ss_pred             -------------------------CCccccchhhh---ccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHH
Q 045092          159 -------------------------QPIVYMAPEYA---KHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLD  210 (307)
Q Consensus       159 -------------------------~t~~y~aPE~~---~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~  210 (307)
                                               .|+.|+|||.+   .+..++.++|||||||++|||++|+.||.......      
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~------  260 (337)
T 3ll6_A          187 TISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR------  260 (337)
T ss_dssp             CCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------------
T ss_pred             eccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH------
Confidence                                     14559999998   56678999999999999999999999995322111      


Q ss_pred             HHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          211 WLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                          .      .............+..+.+++..|+ +.||.+||++.++++.|.....
T Consensus       261 ----~------~~~~~~~~~~~~~~~~~~~li~~~l-~~~p~~Rps~~e~l~~l~~~~~  308 (337)
T 3ll6_A          261 ----I------VNGKYSIPPHDTQYTVFHSLIRAML-QVNPEERLSIAEVVHQLQEIAA  308 (337)
T ss_dssp             ---------------CCCCTTCCSSGGGHHHHHHHS-CSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ----h------hcCcccCCcccccchHHHHHHHHHc-cCChhhCcCHHHHHHHHHHHHh
Confidence                0      1111111112233446889999999 9999999999999999887543

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.91  E-value=1.5e-24  Score=200.65  Aligned_cols=164  Identities=18%  Similarity=0.246  Sum_probs=125.9

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      .++|...+.||+|+||.||++... +++.||+|.+....   ....+.+.+|+.++..++||||+++++++.+....   
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv   93 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV   93 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            367889999999999999999954 78999999986432   23456789999999999999999999988764110   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        94 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~  173 (384)
T 4fr4_A           94 VDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT  173 (384)
T ss_dssp             ECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCC
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCCceec
Confidence                                                                                            


Q ss_pred             ---Cccccchhhhcc---CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchh
Q 045092          160 ---PIVYMAPEYAKH---GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFK  233 (307)
Q Consensus       160 ---t~~y~aPE~~~~---~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  233 (307)
                         |+.|+|||++..   ..++.++|||||||++|||++|+.||..........+.    ..+..       .....+..
T Consensus       174 ~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~----~~~~~-------~~~~~p~~  242 (384)
T 4fr4_A          174 MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV----HTFET-------TVVTYPSA  242 (384)
T ss_dssp             CCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHH----HHHHH-------CCCCCCTT
T ss_pred             cCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHH----HHHhh-------cccCCCCc
Confidence               888999999863   45899999999999999999999999654333321111    11111       11233445


Q ss_pred             hHHHHHHHhccccCCCCCCCCCC-HHHHHH
Q 045092          234 FYRRTSDGNDQCSSSVTPTNRPL-MSFVVS  262 (307)
Q Consensus       234 ~~~~~~~l~~~C~~~~dP~~RPs-~~~vl~  262 (307)
                      ++..+.+++..|+ +.||.+||+ +.++.+
T Consensus       243 ~s~~~~~li~~lL-~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          243 WSQEMVSLLKKLL-EPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             SCHHHHHHHHHHS-CSSGGGSCCSHHHHHT
T ss_pred             CCHHHHHHHHHHh-cCCHhHhcccHHHHHc
Confidence            6678999999999 999999998 777654

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.91  E-value=2.8e-24  Score=197.19  Aligned_cols=167  Identities=15%  Similarity=0.141  Sum_probs=124.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      .++|...+.||+|+||.||++... +++.||||.+.... ...+.+.+|+.++++++||||+++++++.+....      
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   97 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY   97 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence            467899999999999999999964 78999999986543 3346788999999999999999999988654110      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        98 ~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~  177 (361)
T 3uc3_A           98 ASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST  177 (361)
T ss_dssp             CCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC------------
T ss_pred             CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCC
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCCCCch-hHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 --PIVYMAPEYAKHGYLTDK-AEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 --t~~y~aPE~~~~~~~~~~-sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                        |+.|+|||.+.+..++.+ +|||||||++|||++|+.||.......  .+...+..... .     ..........+.
T Consensus       178 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~~~~~-~-----~~~~~~~~~~s~  249 (361)
T 3uc3_A          178 VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR--DYRKTIQRILS-V-----KYSIPDDIRISP  249 (361)
T ss_dssp             ---CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC--CHHHHHHHHHT-T-----CCCCCTTSCCCH
T ss_pred             cCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH--HHHHHHHHHhc-C-----CCCCCCcCCCCH
Confidence              789999999988887766 899999999999999999996433222  12221111111 1     001111123456


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .+.+++.+|+ +.||.+|||+.++++.
T Consensus       250 ~~~~li~~~L-~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          250 ECCHLISRIF-VADPATRISIPEIKTH  275 (361)
T ss_dssp             HHHHHHHHHS-CSCTTTSCCHHHHHTS
T ss_pred             HHHHHHHHHc-cCChhHCcCHHHHHhC
Confidence            8899999999 9999999999999864

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.91  E-value=3.3e-24  Score=196.18  Aligned_cols=182  Identities=16%  Similarity=0.165  Sum_probs=132.4

Q ss_pred             ccHHHHHHHhcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCCh-----------hcHHHHHHHHHHHhhCCCCCc
Q 045092           78 FHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSK-----------QGNREIVNEIGMISALQHPNL  146 (307)
Q Consensus        78 ~~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~-----------~~~~~~~~E~~~l~~l~h~ni  146 (307)
                      ....++....++|...+.||+|+||.||+|...++..||||++.....           ...+.+.+|+.++.+++|+||
T Consensus        12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   91 (362)
T 3pg1_A           12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI   91 (362)
T ss_dssp             HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence            456788888999999999999999999999977799999999864321           123679999999999999999


Q ss_pred             cceeeeeecCCCC-------------------------------------------------------------------
Q 045092          147 VKLYRLCTETLKQ-------------------------------------------------------------------  159 (307)
Q Consensus       147 v~l~g~~~~~~~~-------------------------------------------------------------------  159 (307)
                      +++++++......                                                                   
T Consensus        92 v~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~  171 (362)
T 3pg1_A           92 LGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNN  171 (362)
T ss_dssp             CCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC
T ss_pred             cceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCC
Confidence            9999987432100                                                                   


Q ss_pred             ------------------------Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHH
Q 045092          160 ------------------------PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGS  214 (307)
Q Consensus       160 ------------------------t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~  214 (307)
                                              |+.|+|||.+.+ +.++.++|||||||++|||++|+.||.......   ....+..
T Consensus       172 ~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~i~~  248 (362)
T 3pg1_A          172 DITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN---QLNKIVE  248 (362)
T ss_dssp             CEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHH
T ss_pred             CEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH---HHHHHHH
Confidence                                    778999999876 678999999999999999999999996432111   1111110


Q ss_pred             HHHhh--------------hhhcccccC-------CCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          215 YLKRA--------------RKLNGASCS-------KFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       215 ~~~~~--------------~~~~~~~~~-------~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .....              ..+......       ......+..+.+++..|+ +.||.+|||+.++++.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L-~~dP~~Rpt~~ell~h  317 (362)
T 3pg1_A          249 VVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKML-EFNPQRRISTEQALRH  317 (362)
T ss_dssp             HHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHT-CSSGGGSCCHHHHHTS
T ss_pred             HcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHh-cCChhhCCCHHHHHcC
Confidence            00000              000000000       001123447899999999 9999999999999863

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.91  E-value=2.1e-24  Score=190.54  Aligned_cols=165  Identities=19%  Similarity=0.244  Sum_probs=126.4

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh------hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK------QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  159 (307)
                      .++|...+.||+|+||.||++... +++.||+|.++....      ...+.+.+|+.++.+++|+||+++++++.+....
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   83 (283)
T 3bhy_A            4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV   83 (283)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence            356889999999999999999965 789999999864321      1357899999999999999999999988754110


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~  163 (283)
T 3bhy_A           84 VLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE  163 (283)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred             EEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceecc
Confidence                                                                                            


Q ss_pred             ----------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC
Q 045092          160 ----------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK  229 (307)
Q Consensus       160 ----------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  229 (307)
                                |+.|+|||.+.++.++.++||||||+++++|++|+.||......      +.. ..+...   .....+.
T Consensus       164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~-~~~~~~---~~~~~~~  233 (283)
T 3bhy_A          164 AGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ------ETL-TNISAV---NYDFDEE  233 (283)
T ss_dssp             --------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHH-HHHHTT---CCCCCHH
T ss_pred             CCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH------HHH-HHhHhc---ccCCcch
Confidence                      67799999999999999999999999999999999999643211      111 111111   1111111


Q ss_pred             CchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          230 FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       230 l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .....+..+.+++..|+ +.||.+||++.++++
T Consensus       234 ~~~~~~~~~~~li~~~l-~~dp~~Rps~~~~l~  265 (283)
T 3bhy_A          234 YFSNTSELAKDFIRRLL-VKDPKRRMTIAQSLE  265 (283)
T ss_dssp             HHTTCCHHHHHHHHTTS-CSSGGGSCCHHHHHH
T ss_pred             hcccCCHHHHHHHHHHc-cCCHhHCcCHHHHHh
Confidence            12234558899999999 999999999999986

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.91  E-value=1.1e-24  Score=192.88  Aligned_cols=169  Identities=20%  Similarity=0.320  Sum_probs=123.7

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc--CCC--EEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC
Q 045092           87 TNNFASENEISERGFGPVYRGLLA--DGK--VIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~--~~~--~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  159 (307)
                      .++|...+.||+|+||.||+|...  ++.  .||||+++..   .....+.+.+|+.++.+++|+||+++++++......
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   96 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK   96 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCE
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCCce
Confidence            457888999999999999999853  333  6899998754   233456899999999999999999999988764210


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        97 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~  176 (291)
T 1u46_A           97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD  176 (291)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CC
T ss_pred             eeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEcccccccccccccc
Confidence                                                                                            


Q ss_pred             ----------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccC
Q 045092          160 ----------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCS  228 (307)
Q Consensus       160 ----------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  228 (307)
                                |..|+|||.+.+..++.++||||||++++||++ |+.||.....      .+.... +.     ......
T Consensus       177 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~~-~~-----~~~~~~  244 (291)
T 1u46_A          177 HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG------SQILHK-ID-----KEGERL  244 (291)
T ss_dssp             EEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHH-HH-----TSCCCC
T ss_pred             chhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH------HHHHHH-HH-----ccCCCC
Confidence                      457999999998889999999999999999999 9999964321      111111 11     111122


Q ss_pred             CCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          229 KFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       229 ~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      ..+..++..+.+++..|+ +.||.+||++.++++.|+...
T Consensus       245 ~~~~~~~~~l~~li~~~l-~~~p~~Rps~~~l~~~l~~~~  283 (291)
T 1u46_A          245 PRPEDCPQDIYNVMVQCW-AHKPEDRPTFVALRDFLLEAQ  283 (291)
T ss_dssp             CCCTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHC
T ss_pred             CCCcCcCHHHHHHHHHHc-cCCcccCcCHHHHHHHHHHhC
Confidence            233456678999999999 999999999999999988754

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.91  E-value=3.7e-24  Score=192.67  Aligned_cols=161  Identities=18%  Similarity=0.302  Sum_probs=122.2

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC------
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK------  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~------  158 (307)
                      .++|+..+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++.+++||||+++++++.+...      
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   84 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE   84 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence            467899999999999999999965 78999999987443 3345789999999999999999999987632100      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  164 (332)
T 3qd2_B           85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG  164 (332)
T ss_dssp             HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred             hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence                                                                                            


Q ss_pred             -------------------------------------------------------------------------CCccccc
Q 045092          159 -------------------------------------------------------------------------QPIVYMA  165 (307)
Q Consensus       159 -------------------------------------------------------------------------~t~~y~a  165 (307)
                                                                                               +|+.|+|
T Consensus       165 ~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  244 (332)
T 3qd2_B          165 VCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS  244 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred             HHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence                                                                                     1567999


Q ss_pred             hhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccc
Q 045092          166 PEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQC  245 (307)
Q Consensus       166 PE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C  245 (307)
                      ||.+.+..++.++|||||||+++||++|..|+..     .   .. ....      ......+.........+.+++..|
T Consensus       245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~-----~---~~-~~~~------~~~~~~~~~~~~~~~~~~~li~~~  309 (332)
T 3qd2_B          245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME-----R---VR-IITD------VRNLKFPLLFTQKYPQEHMMVQDM  309 (332)
T ss_dssp             HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH-----H---HH-HHHH------HHTTCCCHHHHHHCHHHHHHHHHH
T ss_pred             hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH-----H---HH-HHHH------hhccCCCcccccCChhHHHHHHHH
Confidence            9999999999999999999999999998776521     0   00 0000      111122222233445788999999


Q ss_pred             cCCCCCCCCCCHHHHHHH
Q 045092          246 SSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       246 ~~~~dP~~RPs~~~vl~~  263 (307)
                      + +.||.+||++.++++.
T Consensus       310 l-~~~p~~Rps~~~~l~~  326 (332)
T 3qd2_B          310 L-SPSPTERPEATDIIEN  326 (332)
T ss_dssp             H-CSSGGGSCCHHHHHHS
T ss_pred             c-cCCCCcCCCHHHHhhc
Confidence            9 9999999999999863

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.91  E-value=1.9e-24  Score=199.84  Aligned_cols=174  Identities=17%  Similarity=0.229  Sum_probs=123.9

Q ss_pred             hcCcccCCcccCC--CCeeEEEEEEc-CCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           87 TNNFASENEISER--GFGPVYRGLLA-DGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        87 t~~f~~~~~lG~G--~~g~Vy~~~~~-~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      .++|++.+.||+|  +||.||+|... +++.||||++...  .....+.+.+|+.++++++||||+++++++.+....  
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  103 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV  103 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence            4678999999999  99999999965 7899999998644  233456788999999999999999999987654110  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~  183 (389)
T 3gni_B          104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQ  183 (389)
T ss_dssp             EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTE
T ss_pred             EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeeccccc
Confidence                                                                                            


Q ss_pred             --------------Cccccchhhhcc--CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHh----h
Q 045092          160 --------------PIVYMAPEYAKH--GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKR----A  219 (307)
Q Consensus       160 --------------t~~y~aPE~~~~--~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~----~  219 (307)
                                    |+.|+|||.+.+  ..++.++|||||||++|||++|+.||........  +..........    .
T Consensus       184 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~  261 (389)
T 3gni_B          184 RQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM--LLEKLNGTVPCLLDTS  261 (389)
T ss_dssp             ECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH--HHHC------------
T ss_pred             cccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHhcCCCCcccccc
Confidence                          556999999987  5799999999999999999999999965332221  11100000000    0


Q ss_pred             -----------------hhh-------------cccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          220 -----------------RKL-------------NGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       220 -----------------~~~-------------~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                                       ...             ...........++..+.+++..|+ +.||.+|||+.++++.
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L-~~dP~~Rpta~ell~h  334 (389)
T 3gni_B          262 TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCL-QRNPDARPSASTLLNH  334 (389)
T ss_dssp             --------------------------------------------CCHHHHHHHHHHT-CSCTTTSCCHHHHTTS
T ss_pred             ccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHh-hcCcccCCCHHHHhcC
Confidence                             000             000001122334557899999999 9999999999999854

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.91  E-value=2.7e-24  Score=190.83  Aligned_cols=173  Identities=14%  Similarity=0.153  Sum_probs=130.2

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-------
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-------  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-------  158 (307)
                      .++|...+.||+|+||.||+|.. .+++.||||.+.....  ...+.+|+.++..++|+|++..++++.....       
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence            56899999999999999999995 5789999999865432  2468899999999999887776665532200       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        86 ~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~  165 (296)
T 3uzp_A           86 LLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ  165 (296)
T ss_dssp             CCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred             ecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccccc
Confidence                                                                                            


Q ss_pred             -----------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhccccc
Q 045092          159 -----------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC  227 (307)
Q Consensus       159 -----------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  227 (307)
                                 +|+.|+|||.+.++.++.++|||||||++|||++|+.||..............+....     . ....
T Consensus       166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-----~-~~~~  239 (296)
T 3uzp_A          166 HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK-----M-STPI  239 (296)
T ss_dssp             BCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHH-----H-HSCH
T ss_pred             ccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccc-----c-CCch
Confidence                       0567999999999999999999999999999999999997644333322222221111     0 0111


Q ss_pred             CCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          228 SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       228 ~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      +.+...++..+.+++..|+ +.||.+||++.+|++.|+...
T Consensus       240 ~~~~~~~~~~l~~li~~~l-~~dp~~Rps~~~l~~~l~~~~  279 (296)
T 3uzp_A          240 EVLCKGYPSEFATYLNFCR-SLRFDDKPDYSYLRQLFRNLF  279 (296)
T ss_dssp             HHHTTTSCHHHHHHHHHHH-TSCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHhhCCHHHHHHHHHHH-hcCcCcCCCHHHHHHHHHHHH
Confidence            1122345668999999999 999999999999999998753

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.91  E-value=2.1e-24  Score=193.67  Aligned_cols=165  Identities=16%  Similarity=0.150  Sum_probs=124.3

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK----  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~----  158 (307)
                      .++|...+.||+|+||.||++.. .+++.||||++....   ......+.+|+.++.+++||||+++++++.....    
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            46799999999999999999995 578999999997542   2334578999999999999999999987654210    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        91 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~  170 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG  170 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC-------
T ss_pred             cEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccc
Confidence                                                                                            


Q ss_pred             ----------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccC
Q 045092          159 ----------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCS  228 (307)
Q Consensus       159 ----------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  228 (307)
                                +|+.|+|||.+.+..++.++|||||||++|||++|+.||.....      ............    ....
T Consensus       171 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~------~~~~~~~~~~~~----~~~~  240 (311)
T 3ork_A          171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP------VSVAYQHVREDP----IPPS  240 (311)
T ss_dssp             -----------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHCCC----CCHH
T ss_pred             cccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHhcCCC----CCcc
Confidence                      07789999999999999999999999999999999999964322      111111111110    0111


Q ss_pred             CCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          229 KFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       229 ~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .....++..+.+++..|+ +.||.+||+..+++.
T Consensus       241 ~~~~~~~~~l~~li~~~l-~~dP~~R~~~~~~l~  273 (311)
T 3ork_A          241 ARHEGLSADLDAVVLKAL-AKNPENRYQTAAEMR  273 (311)
T ss_dssp             HHSTTCCHHHHHHHHHHT-CSSGGGSCSSHHHHH
T ss_pred             cccCCCCHHHHHHHHHHH-hcCHhhChhhHHHHH
Confidence            112235568999999999 999999997666553

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.91  E-value=3.8e-24  Score=196.23  Aligned_cols=177  Identities=11%  Similarity=0.044  Sum_probs=127.3

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcC------CCEEEEEEccCCChhc-----------HHHHHHHHHHHhhCCCCCccce
Q 045092           87 TNNFASENEISERGFGPVYRGLLAD------GKVIEVKQLSSKSKQG-----------NREIVNEIGMISALQHPNLVKL  149 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~------~~~vAvK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~l  149 (307)
                      .++|.+.+.||+|+||.||+|....      ++.||||.+.......           ...+..|+..+..++|+||+++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~  113 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY  113 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence            5689999999999999999998643      4789999986553221           1224556667788899999999


Q ss_pred             eeeeecCCC-----------------------------------------------------------------------
Q 045092          150 YRLCTETLK-----------------------------------------------------------------------  158 (307)
Q Consensus       150 ~g~~~~~~~-----------------------------------------------------------------------  158 (307)
                      ++++.....                                                                       
T Consensus       114 ~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~  193 (364)
T 3op5_A          114 WGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQV  193 (364)
T ss_dssp             EEEEEEEETTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCE
T ss_pred             EeeeeeccCCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeE
Confidence            998755310                                                                       


Q ss_pred             -----------------------------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHH
Q 045092          159 -----------------------------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLL  209 (307)
Q Consensus       159 -----------------------------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~  209 (307)
                                                   +|+.|+|||++.+..++.++|||||||++|||++|+.||......  ....
T Consensus       194 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~--~~~~  271 (364)
T 3op5_A          194 YLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD--PKYV  271 (364)
T ss_dssp             EECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC--HHHH
T ss_pred             EEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC--HHHH
Confidence                                         167899999999999999999999999999999999999643221  1112


Q ss_pred             HHHHHHHHhhhhhcccccCCCc-hhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          210 DWLGSYLKRARKLNGASCSKFG-FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      ......... . +....++.+. ..++.++.+++..|+ +.||.+||++.+|++.|+...
T Consensus       272 ~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~li~~cl-~~~p~~RP~~~~l~~~l~~~~  328 (364)
T 3op5_A          272 RDSKIRYRE-N-IASLMDKCFPAANAPGEIAKYMETVK-LLDYTEKPLYENLRDILLQGL  328 (364)
T ss_dssp             HHHHHHHHH-C-HHHHHHHHSCTTCCCHHHHHHHHHHH-TCCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHhhh-h-HHHHHHHhcccccCHHHHHHHHHHHh-cCCCCCCCCHHHHHHHHHHHH
Confidence            111111111 1 2222222221 344668999999999 999999999999999887654

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.91  E-value=4.5e-24  Score=191.42  Aligned_cols=172  Identities=15%  Similarity=0.159  Sum_probs=125.2

Q ss_pred             cCcccC-CcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC------
Q 045092           88 NNFASE-NEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK------  158 (307)
Q Consensus        88 ~~f~~~-~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~------  158 (307)
                      +.|.+. +.||+|+||.||+|.. .+++.||||++..........+.+|+.++.++ +|+||+++++++.+...      
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   91 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE   91 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence            567764 7899999999999994 47899999999766555567899999999995 79999999998865410      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        92 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~  171 (316)
T 2ac3_A           92 KMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS  171 (316)
T ss_dssp             CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---------
T ss_pred             cCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccc
Confidence                                                                                            


Q ss_pred             -----------CCccccchhhhcc-----CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccH--------HHHHHH
Q 045092          159 -----------QPIVYMAPEYAKH-----GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYL--------LDWLGS  214 (307)
Q Consensus       159 -----------~t~~y~aPE~~~~-----~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l--------~~~~~~  214 (307)
                                 +|+.|+|||.+..     +.++.++|||||||++|||++|+.||...........        ...+..
T Consensus       172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  251 (316)
T 2ac3_A          172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFE  251 (316)
T ss_dssp             ----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHH
T ss_pred             cccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHH
Confidence                       1567999999875     5688999999999999999999999975433221100        011111


Q ss_pred             HHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          215 YLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       215 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .+..+. . . ........++..+.+++..|+ +.||.+||++.++++.
T Consensus       252 ~i~~~~-~-~-~~~~~~~~~~~~~~~li~~~L-~~dP~~Rps~~e~l~h  296 (316)
T 2ac3_A          252 SIQEGK-Y-E-FPDKDWAHISCAAKDLISKLL-VRDAKQRLSAAQVLQH  296 (316)
T ss_dssp             HHHHCC-C-C-CCHHHHTTSCHHHHHHHHHHS-CSSTTTSCCHHHHHHS
T ss_pred             HHhccC-c-c-cCchhcccCCHHHHHHHHHHh-hCChhhCCCHHHHhcC
Confidence            111111 0 0 000001234558899999999 9999999999999873

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.91  E-value=4.6e-24  Score=193.05  Aligned_cols=161  Identities=17%  Similarity=0.199  Sum_probs=121.1

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE----cCCCEEEEEEccCCC----hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC
Q 045092           87 TNNFASENEISERGFGPVYRGLL----ADGKVIEVKQLSSKS----KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~----~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  158 (307)
                      .++|...+.||+|+||.||++..    .+++.||||+++...    ......+.+|+.++.+++|+||+++++++.....
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            46789999999999999999995    478999999987542    2234568899999999999999999998876421


Q ss_pred             C-------------------------------------------------------------------------------
Q 045092          159 Q-------------------------------------------------------------------------------  159 (307)
Q Consensus       159 ~-------------------------------------------------------------------------------  159 (307)
                      .                                                                               
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~  175 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG  175 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC-------
T ss_pred             EEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCC
Confidence            1                                                                               


Q ss_pred             --------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCc
Q 045092          160 --------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFG  231 (307)
Q Consensus       160 --------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~  231 (307)
                              |+.|+|||.+.++.++.++|||||||++|||++|+.||.....      ........ ..       ...++
T Consensus       176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~i~-~~-------~~~~p  241 (327)
T 3a62_A          176 TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR------KKTIDKIL-KC-------KLNLP  241 (327)
T ss_dssp             ---CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHH-HT-------CCCCC
T ss_pred             ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH------HHHHHHHH-hC-------CCCCC
Confidence                    7889999999999999999999999999999999999964321      11111111 11       12233


Q ss_pred             hhhHHHHHHHhccccCCCCCCCCC-----CHHHHHH
Q 045092          232 FKFYRRTSDGNDQCSSSVTPTNRP-----LMSFVVS  262 (307)
Q Consensus       232 ~~~~~~~~~l~~~C~~~~dP~~RP-----s~~~vl~  262 (307)
                      ...+..+.+++..|+ +.||.+||     ++.++++
T Consensus       242 ~~~~~~~~~li~~~L-~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          242 PYLTQEARDLLKKLL-KRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             TTSCHHHHHHHHHHS-CSCGGGSTTSSTTTHHHHHH
T ss_pred             CCCCHHHHHHHHHHH-hcCHhhccCCCCCCHHHHHc
Confidence            456678999999999 99999999     7778875

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.91  E-value=1.4e-24  Score=191.27  Aligned_cols=161  Identities=20%  Similarity=0.262  Sum_probs=111.2

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      .++|...+.||+|+||.||+|.. .+++.||||.+....   ....+.+.+|+.++.+++|+||+++++++.+....   
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV   89 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence            46799999999999999999995 578999999986432   12346799999999999999999999988764110   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~  169 (278)
T 3cok_A           90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH  169 (278)
T ss_dssp             EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC------
T ss_pred             EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcc
Confidence                                                                                            


Q ss_pred             -----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          160 -----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       160 -----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                           |+.|+|||.+.+..++.++||||||++++||++|+.||........  + .           .....+..++..+
T Consensus       170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~-~-----------~~~~~~~~~~~~~  235 (278)
T 3cok_A          170 YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT--L-N-----------KVVLADYEMPSFL  235 (278)
T ss_dssp             ----------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------------CCSSCCCCCTTS
T ss_pred             eeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH--H-H-----------HHhhcccCCcccc
Confidence                 6789999999988899999999999999999999999964332211  0 0           0011122334456


Q ss_pred             HHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      +..+.+++..|+ +.||++||++.++++
T Consensus       236 ~~~~~~li~~~l-~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          236 SIEAKDLIHQLL-RRNPADRLSLSSVLD  262 (278)
T ss_dssp             CHHHHHHHHHHS-CSSGGGSCCHHHHTT
T ss_pred             CHHHHHHHHHHc-ccCHhhCCCHHHHhc
Confidence            678999999999 999999999999975

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.91  E-value=7.9e-24  Score=192.14  Aligned_cols=168  Identities=14%  Similarity=0.147  Sum_probs=126.5

Q ss_pred             HHHhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC-----ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCC
Q 045092           84 KAATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK-----SKQGNREIVNEIGMISALQHPNLVKLYRLCTETL  157 (307)
Q Consensus        84 ~~~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~  157 (307)
                      ....++|...+.||+|+||.||+|.. .++..||||.+...     .....+.+.+|+.++.+++||||+++++++.+..
T Consensus        22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~  101 (345)
T 3hko_A           22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ  101 (345)
T ss_dssp             HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence            34477899999999999999999995 47889999998543     2344568999999999999999999998775321


Q ss_pred             ------------------------------------------------------------C-------------------
Q 045092          158 ------------------------------------------------------------K-------------------  158 (307)
Q Consensus       158 ------------------------------------------------------------~-------------------  158 (307)
                                                                                  .                   
T Consensus       102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l  181 (345)
T 3hko_A          102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL  181 (345)
T ss_dssp             EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence                                                                        0                   


Q ss_pred             ------------------------------------------------------CCccccchhhhcc--CCCCchhHHHH
Q 045092          159 ------------------------------------------------------QPIVYMAPEYAKH--GYLTDKAEVCS  182 (307)
Q Consensus       159 ------------------------------------------------------~t~~y~aPE~~~~--~~~~~~sDV~s  182 (307)
                                                                            +|+.|+|||.+..  +.++.++||||
T Consensus       182 ~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diws  261 (345)
T 3hko_A          182 HYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS  261 (345)
T ss_dssp             HHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHH
T ss_pred             HHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHH
Confidence                                                                  0677999999875  67899999999


Q ss_pred             HHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          183 FGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       183 ~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      |||++|||++|+.||.....      .+.........    ..........++..+.+++..|+ +.||.+||++.++++
T Consensus       262 lG~il~el~~g~~pf~~~~~------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~l-~~~p~~Rps~~~~l~  330 (345)
T 3hko_A          262 AGVLLHLLLMGAVPFPGVND------ADTISQVLNKK----LCFENPNYNVLSPLARDLLSNLL-NRNVDERFDAMRALQ  330 (345)
T ss_dssp             HHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCC----CCTTSGGGGGSCHHHHHHHHHHS-CSCTTTSCCHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCCCCh------HHHHHHHHhcc----cccCCcccccCCHHHHHHHHHHc-CCChhHCCCHHHHhc
Confidence            99999999999999964332      11122222111    01111111234568999999999 999999999999986

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.91  E-value=1e-24  Score=195.67  Aligned_cols=174  Identities=17%  Similarity=0.241  Sum_probs=129.7

Q ss_pred             cccHHHHHHHhcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCC--CCCccceeee
Q 045092           77 SFHLRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQ--HPNLVKLYRL  152 (307)
Q Consensus        77 ~~~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l~g~  152 (307)
                      .+.+..+....++|...+.||+|+||.||++...+++.||||.+...  .....+.+.+|+.++.+++  |+||++++++
T Consensus        17 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~   96 (313)
T 3cek_A           17 NLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY   96 (313)
T ss_dssp             ---CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEE
T ss_pred             CCCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEE
Confidence            34444444556789999999999999999999878999999998643  3345578999999999996  5999999998


Q ss_pred             eecCCC--------------------------------------------------------------------------
Q 045092          153 CTETLK--------------------------------------------------------------------------  158 (307)
Q Consensus       153 ~~~~~~--------------------------------------------------------------------------  158 (307)
                      +.....                                                                          
T Consensus        97 ~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~kL~Dfg~~~~~  176 (313)
T 3cek_A           97 EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQM  176 (313)
T ss_dssp             EECSSEEEEEECCCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSSCC-
T ss_pred             eecCCEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEECCeEEEeeccccccc
Confidence            765410                                                                          


Q ss_pred             -------------CCccccchhhhcc-----------CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHH
Q 045092          159 -------------QPIVYMAPEYAKH-----------GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGS  214 (307)
Q Consensus       159 -------------~t~~y~aPE~~~~-----------~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~  214 (307)
                                   +|+.|+|||.+.+           +.++.++||||||+++|||++|+.||......     ...+..
T Consensus       177 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-----~~~~~~  251 (313)
T 3cek_A          177 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-----ISKLHA  251 (313)
T ss_dssp             -------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-----HHHHHH
T ss_pred             cCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH-----HHHHHH
Confidence                         0778999999875           47889999999999999999999999532211     111111


Q ss_pred             HHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          215 YLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       215 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .      ........++...+..+.+++..|+ +.||.+||++.++++
T Consensus       252 ~------~~~~~~~~~~~~~~~~l~~li~~~l-~~dp~~Rps~~ell~  292 (313)
T 3cek_A          252 I------IDPNHEIEFPDIPEKDLQDVLKCCL-KRDPKQRISIPELLA  292 (313)
T ss_dssp             H------HCTTSCCCCCCCSCHHHHHHHHHHT-CSSTTTSCCHHHHHT
T ss_pred             H------HhcccccCCcccchHHHHHHHHHHc-cCCcccCcCHHHHhc
Confidence            1      1111222333444568999999999 999999999999986

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.90  E-value=6.4e-24  Score=189.97  Aligned_cols=173  Identities=17%  Similarity=0.229  Sum_probs=121.4

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC-----hhcHHHHHHHHHHHhhCC---CCCccceeeeeecC
Q 045092           86 ATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS-----KQGNREIVNEIGMISALQ---HPNLVKLYRLCTET  156 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-----~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~  156 (307)
                      .+++|+..+.||+|+||.||+|.. .+++.||||++....     ......+.+|+.++.+++   |+||+++++++...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            367899999999999999999994 578999999986321     112346778888877764   99999999987653


Q ss_pred             CCC-----------------------------------------------------------------------------
Q 045092          157 LKQ-----------------------------------------------------------------------------  159 (307)
Q Consensus       157 ~~~-----------------------------------------------------------------------------  159 (307)
                      ...                                                                             
T Consensus        87 ~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~  166 (308)
T 3g33_A           87 RTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL  166 (308)
T ss_dssp             CSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred             CCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCcc
Confidence            210                                                                             


Q ss_pred             ---------------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhh--hh
Q 045092          160 ---------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRAR--KL  222 (307)
Q Consensus       160 ---------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~--~~  222 (307)
                                     |+.|+|||.+.++.++.++|||||||++|||++|+.||.......   ....+........  ..
T Consensus       167 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~  243 (308)
T 3g33_A          167 ARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD---QLGKIFDLIGLPPEDDW  243 (308)
T ss_dssp             TTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH---HHHHHHHHHCCCCTTTS
T ss_pred             ccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCChhhc
Confidence                           788999999999999999999999999999999999996433211   1111111110000  00


Q ss_pred             cc-------cccCC-------CchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          223 NG-------ASCSK-------FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       223 ~~-------~~~~~-------l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ..       ...+.       +....+..+.+++..|+ +.||.+|||+.++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L-~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          244 PRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEML-TFNPHKRISAFRALQ  296 (308)
T ss_dssp             CSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHT-CSSTTTSCCHHHHHT
T ss_pred             cchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHh-cCCCccCCCHHHHhc
Confidence            00       00000       01123457889999999 999999999999976

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.90  E-value=1e-23  Score=188.08  Aligned_cols=162  Identities=18%  Similarity=0.145  Sum_probs=124.8

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC----hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS----KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK---  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~---  158 (307)
                      .++|...+.||+|+||.||++.. .+++.||||.+....    ......+.+|+.++.+++|+||+++++++.....   
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence            47899999999999999999995 478899999986432    2345679999999999999999999998743210   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        84 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~  163 (305)
T 2wtk_C           84 YMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA  163 (305)
T ss_dssp             EEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC
T ss_pred             EEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCccc
Confidence                                                                                            


Q ss_pred             ---------CCccccchhhhccCC--CCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhccccc
Q 045092          159 ---------QPIVYMAPEYAKHGY--LTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC  227 (307)
Q Consensus       159 ---------~t~~y~aPE~~~~~~--~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  227 (307)
                               +|+.|+|||.+.+..  ++.++||||||++++||++|+.||.....      .. ....+..+       .
T Consensus       164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~-~~~~i~~~-------~  229 (305)
T 2wtk_C          164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI------YK-LFENIGKG-------S  229 (305)
T ss_dssp             SSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH------HH-HHHHHHHC-------C
T ss_pred             cccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH------HH-HHHHHhcC-------C
Confidence                     067899999987643  47899999999999999999999964321      11 11111111       1


Q ss_pred             CCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          228 SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       228 ~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ..++..++..+.+++..|+ +.||.+||++.++++.
T Consensus       230 ~~~~~~~~~~l~~li~~~l-~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          230 YAIPGDCGPPLSDLLKGML-EYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             CCCCSSSCHHHHHHHHHHT-CSSTTTSCCHHHHHHS
T ss_pred             CCCCCccCHHHHHHHHHHc-cCChhhCCCHHHHhcC
Confidence            2234456678899999999 9999999999999864

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.90  E-value=1.8e-24  Score=190.42  Aligned_cols=164  Identities=14%  Similarity=0.178  Sum_probs=125.5

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      .++|...+.||+|+||.||+|... ++..||+|.+........+.+.+|++++.+++|+||+++++++.+....      
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL   87 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence            467899999999999999999954 6789999998765555677899999999999999999999988764110      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        88 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~  167 (277)
T 3f3z_A           88 CTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT  167 (277)
T ss_dssp             CCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBCC
T ss_pred             cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchhc
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 ---PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 ---t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                         |+.|+|||.+.+ .++.++||||||++++||++|+.||......      + ....+..+.   ..........++.
T Consensus       168 ~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~-~~~~~~~~~---~~~~~~~~~~~~~  236 (277)
T 3f3z_A          168 KVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDS------E-VMLKIREGT---FTFPEKDWLNVSP  236 (277)
T ss_dssp             CCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------H-HHHHHHHCC---CCCCHHHHTTSCH
T ss_pred             cCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHH------H-HHHHHHhCC---CCCCchhhhcCCH
Confidence               778999998764 5899999999999999999999999643211      1 111111111   0000000113456


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .+.+++..|+ +.||.+||++.++++
T Consensus       237 ~~~~li~~~l-~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          237 QAESLIRRLL-TKSPKQRITSLQALE  261 (277)
T ss_dssp             HHHHHHHHHT-CSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHc-cCChhhCcCHHHHhc
Confidence            8899999999 999999999999875

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.90  E-value=4e-24  Score=198.57  Aligned_cols=163  Identities=15%  Similarity=0.140  Sum_probs=123.0

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCCC--
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~--  159 (307)
                      .++|...+.||+|+||.||+++.. +++.||||+++...   ....+.+.+|..++.++ +||||+++++++.+....  
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            468999999999999999999964 68899999987542   22345688999999887 899999999988764110  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       131 V~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~  210 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT  210 (396)
T ss_dssp             EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCB
T ss_pred             EEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCCCcc
Confidence                                                                                            


Q ss_pred             -----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCc--ccHHHHHHHHHHhhhhhcccccCCCch
Q 045092          160 -----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDK--FYLLDWLGSYLKRARKLNGASCSKFGF  232 (307)
Q Consensus       160 -----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~l~~  232 (307)
                           |+.|+|||++.+..++.++|||||||++|||++|+.||........  ....+.+...+...       ...++.
T Consensus       211 ~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~-------~~~~p~  283 (396)
T 4dc2_A          211 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-------QIRIPR  283 (396)
T ss_dssp             CCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHC-------CCCCCT
T ss_pred             ccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcc-------ccCCCC
Confidence                 8889999999999999999999999999999999999964322111  11112222222221       123445


Q ss_pred             hhHHHHHHHhccccCCCCCCCCCCH
Q 045092          233 KFYRRTSDGNDQCSSSVTPTNRPLM  257 (307)
Q Consensus       233 ~~~~~~~~l~~~C~~~~dP~~RPs~  257 (307)
                      .++..+.+++..|+ +.||.+||++
T Consensus       284 ~~s~~~~~li~~lL-~~dP~~R~~~  307 (396)
T 4dc2_A          284 SLSVKAASVLKSFL-NKDPKERLGC  307 (396)
T ss_dssp             TSCHHHHHHHHHHT-CSCTTTSTTC
T ss_pred             cCCHHHHHHHHHHh-cCCHhHcCCC
Confidence            56678999999999 9999999985

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.90  E-value=6.6e-24  Score=193.66  Aligned_cols=163  Identities=15%  Similarity=0.145  Sum_probs=123.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC---ChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK---SKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK---  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~---  158 (307)
                      .++|...+.||+|+||.||+++.. +++.||||++...   .....+.+.+|+.++.++ +||||+++++++.+...   
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   87 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF   87 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence            367889999999999999999964 6889999998753   233456788999999988 89999999998865411   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        88 v~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~  167 (345)
T 3a8x_A           88 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT  167 (345)
T ss_dssp             EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCB
T ss_pred             EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCCCcc
Confidence                                                                                            


Q ss_pred             ----CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcc--cHHHHHHHHHHhhhhhcccccCCCch
Q 045092          159 ----QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKF--YLLDWLGSYLKRARKLNGASCSKFGF  232 (307)
Q Consensus       159 ----~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~l~~  232 (307)
                          +|+.|+|||.+.+..++.++|||||||++|||++|+.||.........  .....+...+...       ...++.
T Consensus       168 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~-------~~~~p~  240 (345)
T 3a8x_A          168 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-------QIRIPR  240 (345)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC-------CCCCCT
T ss_pred             cccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC-------CCCCCC
Confidence                078899999999999999999999999999999999999643221110  1111122222211       123445


Q ss_pred             hhHHHHHHHhccccCCCCCCCCCCH
Q 045092          233 KFYRRTSDGNDQCSSSVTPTNRPLM  257 (307)
Q Consensus       233 ~~~~~~~~l~~~C~~~~dP~~RPs~  257 (307)
                      ..+..+.+++..|+ +.||.+||++
T Consensus       241 ~~s~~~~~li~~lL-~~dP~~R~~~  264 (345)
T 3a8x_A          241 SLSVKAASVLKSFL-NKDPKERLGC  264 (345)
T ss_dssp             TSCHHHHHHHHHHT-CSSTTTSTTC
T ss_pred             CCCHHHHHHHHHHh-cCCHhHCCCC
Confidence            56678999999999 9999999985

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.90  E-value=5.2e-24  Score=187.10  Aligned_cols=164  Identities=20%  Similarity=0.195  Sum_probs=125.2

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      .++|...+.||+|+||.||+|... +++.||||.+.... ....+.+.+|+.++..++|+||+++++++.+....     
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence            467899999999999999999964 78999999986432 33456899999999999999999999988654110     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        86 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  165 (276)
T 2yex_A           86 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN  165 (276)
T ss_dssp             CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBC
T ss_pred             ecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhccc
Confidence                                                                                            


Q ss_pred             ----CccccchhhhccCCC-CchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          160 ----PIVYMAPEYAKHGYL-TDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       160 ----t~~y~aPE~~~~~~~-~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                          |+.|+|||.+.+..+ +.++||||||++++||++|+.||........ .+..     +....     ........+
T Consensus       166 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~-----~~~~~-----~~~~~~~~~  234 (276)
T 2yex_A          166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSD-----WKEKK-----TYLNPWKKI  234 (276)
T ss_dssp             CCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH-HHHH-----HHTTC-----TTSTTGGGS
T ss_pred             CCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH-HHHH-----hhhcc-----cccCchhhc
Confidence                667999999987665 7789999999999999999999965432211 1111     11111     111112345


Q ss_pred             HHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      +..+.+++..|+ +.||.+||++.++++
T Consensus       235 ~~~~~~li~~~l-~~~p~~Rps~~~il~  261 (276)
T 2yex_A          235 DSAPLALLHKIL-VENPSARITIPDIKK  261 (276)
T ss_dssp             CHHHHHHHHHHS-CSSTTTSCCHHHHTT
T ss_pred             CHHHHHHHHHHC-CCCchhCCCHHHHhc
Confidence            668899999999 999999999999875

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.90  E-value=3.9e-24  Score=189.66  Aligned_cols=174  Identities=14%  Similarity=0.144  Sum_probs=126.9

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC------
Q 045092           86 ATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK------  158 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~------  158 (307)
                      ..++|...+.||+|+||.||+|.. .+++.||||.+.....  ...+.+|+.++..++|+|++..++++.....      
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence            357899999999999999999995 5789999998654322  2358889999999998888877766533210      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        85 e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~  164 (296)
T 4hgt_A           85 ELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH  164 (296)
T ss_dssp             ECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred             EccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccC
Confidence                                                                                            


Q ss_pred             ------------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccc
Q 045092          159 ------------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGAS  226 (307)
Q Consensus       159 ------------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  226 (307)
                                  +|+.|+|||.+.+..++.++|||||||++|||++|+.||..............+.....      ...
T Consensus       165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~------~~~  238 (296)
T 4hgt_A          165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM------STP  238 (296)
T ss_dssp             CBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH------HSC
T ss_pred             ccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccc------cch
Confidence                        06789999999999999999999999999999999999976544333332221111110      011


Q ss_pred             cCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          227 CSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       227 ~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      .+.+...++..+.+++..|+ +.||++||++.++++.|+...
T Consensus       239 ~~~~~~~~~~~l~~li~~~l-~~~p~~Rpt~~~l~~~l~~~~  279 (296)
T 4hgt_A          239 IEVLCKGYPSEFATYLNFCR-SLRFDDKPDYSYLRQLFRNLF  279 (296)
T ss_dssp             HHHHTTTSCHHHHHHHHHHH-TSCTTCCCCHHHHHHHHHHHH
T ss_pred             hhhhhccCCHHHHHHHHHHH-hcCCCCCCCHHHHHHHHHHHH
Confidence            11112334568999999999 999999999999999988754

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.90  E-value=4.7e-24  Score=195.06  Aligned_cols=172  Identities=16%  Similarity=0.234  Sum_probs=127.8

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      .++|...+.||+|+||.||++... ++..||+|.+... .....+.+.+|+.++.+++|+||+++++++......     
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  111 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME  111 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence            357899999999999999999964 7899999998754 334456899999999999999999999988764110     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       112 ~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  191 (360)
T 3eqc_A          112 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV  191 (360)
T ss_dssp             CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----C
T ss_pred             CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCCC
Confidence                                                                                            


Q ss_pred             -CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHH---------------------------
Q 045092          160 -PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDW---------------------------  211 (307)
Q Consensus       160 -t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~---------------------------  211 (307)
                       |+.|+|||.+.+..++.++|||||||+++||++|+.||..............                           
T Consensus       192 gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (360)
T 3eqc_A          192 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDS  271 (360)
T ss_dssp             CCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC----------------------------
T ss_pred             CCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCC
Confidence             8889999999999999999999999999999999999964332110000000                           


Q ss_pred             -----HHHHHHhhhhhcccccCCC-chhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          212 -----LGSYLKRARKLNGASCSKF-GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       212 -----~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                           ......  . +.....+.+ ...++..+.+++..|+ +.||.+|||+.++++
T Consensus       272 ~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~li~~~L-~~dP~~Rpt~~ell~  324 (360)
T 3eqc_A          272 RPPMAIFELLD--Y-IVNEPPPKLPSGVFSLEFQDFVNKCL-IKNPAERADLKQLMV  324 (360)
T ss_dssp             --CCCHHHHHH--H-HHHSCCCCCCTTTSCHHHHHHHHHHH-CSSTTTSCCHHHHHT
T ss_pred             CCcccchhhhh--H-HhccCCCCCCcccccHHHHHHHHHHh-hcChhhCCCHHHHhh
Confidence                 000000  0 011111122 2234568999999999 999999999999985

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.90  E-value=6.6e-24  Score=190.16  Aligned_cols=163  Identities=20%  Similarity=0.306  Sum_probs=121.2

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           86 ATNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      ..++|...+.||+|+||.||+|... +|+.||||.+....  ....+.+|+.++.+++|+||+++++++......     
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            4567999999999999999999964 68999999986543  346799999999999999999999987654110     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  184 (314)
T 3com_A          105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT  184 (314)
T ss_dssp             CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCC
T ss_pred             cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCc
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 ---PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 ---t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                         |+.|+|||.+.+..++.++||||||+++|+|++|+.||......      .... .....    .......+..++.
T Consensus       185 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~-~~~~~----~~~~~~~~~~~~~  253 (314)
T 3com_A          185 VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM------RAIF-MIPTN----PPPTFRKPELWSD  253 (314)
T ss_dssp             CCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHH-HHHHS----CCCCCSSGGGSCH
T ss_pred             cCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH------HHHH-HHhcC----CCcccCCcccCCH
Confidence               67799999999989999999999999999999999999643211      1111 11111    1111112334566


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .+.+++..|+ +.||.+||++.++++
T Consensus       254 ~l~~li~~~l-~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          254 NFTDFVKQCL-VKSPEQRATATQLLQ  278 (314)
T ss_dssp             HHHHHHHHHT-CSCTTTSCCHHHHTT
T ss_pred             HHHHHHHHHc-cCChhhCcCHHHHHh
Confidence            8999999999 999999999999975

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.90  E-value=7.9e-24  Score=192.76  Aligned_cols=176  Identities=14%  Similarity=0.092  Sum_probs=122.5

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc----CCCEEEEEEccCCChh-----------cHHHHHHHHHHHhhCCCCCccceee
Q 045092           87 TNNFASENEISERGFGPVYRGLLA----DGKVIEVKQLSSKSKQ-----------GNREIVNEIGMISALQHPNLVKLYR  151 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vAvK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~g  151 (307)
                      .++|...+.||+|+||.||+|...    ++..||||.+......           ....+.+|+..+..++|+||+++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            367899999999999999999964    5788999998754321           1234678889999999999999999


Q ss_pred             eeecCCC-------------------------------------------------------------------------
Q 045092          152 LCTETLK-------------------------------------------------------------------------  158 (307)
Q Consensus       152 ~~~~~~~-------------------------------------------------------------------------  158 (307)
                      ++.....                                                                         
T Consensus       116 ~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~  195 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLA  195 (345)
T ss_dssp             EEEEESSSCEEEEEEEECEEEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEEC
T ss_pred             ccccccCCCcEEEEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEE
Confidence            8766100                                                                         


Q ss_pred             --------------------------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHH
Q 045092          159 --------------------------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWL  212 (307)
Q Consensus       159 --------------------------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~  212 (307)
                                                +|+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+.. .
T Consensus       196 Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~-~~~~~-~  273 (345)
T 2v62_A          196 DYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP-VAVQT-A  273 (345)
T ss_dssp             CCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH-HHHHH-H
T ss_pred             eCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc-HHHHH-H
Confidence                                      0678999999999999999999999999999999999995322111 11111 1


Q ss_pred             HHHHHhhhhhcccccCCC-chhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          213 GSYLKRARKLNGASCSKF-GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       213 ~~~~~~~~~~~~~~~~~l-~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      .......  +........ ...++..+.+++..|+ +.||.+||++.+|++.|+..
T Consensus       274 ~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~~l-~~dp~~Rps~~~l~~~L~~~  326 (345)
T 2v62_A          274 KTNLLDE--LPQSVLKWAPSGSSCCEIAQFLVCAH-SLAYDEKPNYQALKKILNPH  326 (345)
T ss_dssp             HHHHHHT--TTHHHHHHSCTTSCCHHHHHHHHHHH-TCCTTCCCCHHHHHHHHCTT
T ss_pred             HHhhccc--ccHHHHhhccccccHHHHHHHHHHHh-hcCcccCCCHHHHHHHHhcc
Confidence            1111100  111110000 1145568999999999 99999999999999999875

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.90  E-value=1.4e-23  Score=193.05  Aligned_cols=170  Identities=15%  Similarity=0.161  Sum_probs=120.5

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      .++|...+.||+|+||.||+|.. .+|+.||||++...  .....+.+.+|+.++++++|+||+++++++.....     
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            46789999999999999999995 47899999998643  23345678999999999999999999998765311     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       104 ~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  183 (367)
T 1cm8_A          104 DFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMT  183 (367)
T ss_dssp             CCEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCC
T ss_pred             eEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccccccC
Confidence                                                                                            


Q ss_pred             ---CCccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHh-hh-------------
Q 045092          159 ---QPIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKR-AR-------------  220 (307)
Q Consensus       159 ---~t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~-~~-------------  220 (307)
                         .|+.|+|||.+.+ ..++.++||||+||+++||++|+.||......      +.+...... +.             
T Consensus       184 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~l~~i~~~~g~~~~~~~~~~~~~~  257 (367)
T 1cm8_A          184 GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL------DQLKEIMKVTGTPPAEFVQRLQSDE  257 (367)
T ss_dssp             SSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHHHCCCCHHHHHTCSCHH
T ss_pred             cCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHhcCCCCHHHHHHhhhHH
Confidence               0788999999887 67999999999999999999999999643321      111111110 00             


Q ss_pred             ------hhcccccC---CCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          221 ------KLNGASCS---KFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       221 ------~~~~~~~~---~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                            .+......   .+....+..+.+++.+|+ ..||.+|||+.++++.
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL-~~dP~~R~t~~e~l~h  308 (367)
T 1cm8_A          258 AKNYMKGLPELEKKDFASILTNASPLAVNLLEKML-VLDAEQRVTAGEALAH  308 (367)
T ss_dssp             HHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHS-CSSTTTSCCHHHHHHS
T ss_pred             HHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHc-cCChhHCCCHHHHhcC
Confidence                  00001111   111234558899999999 9999999999999873

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.90  E-value=1.1e-23  Score=193.14  Aligned_cols=172  Identities=16%  Similarity=0.174  Sum_probs=124.8

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC------
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK------  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~------  158 (307)
                      .++|...+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++.+++|+||+++++++.....      
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            567999999999999999999954 78899999987543 3344679999999999999999999998754310      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       106 ~iv~e~~~~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~  185 (364)
T 3qyz_A          106 YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT  185 (364)
T ss_dssp             EEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBC
T ss_pred             EEEEcccCcCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCcc
Confidence                                                                                            


Q ss_pred             -------CCccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHh------------
Q 045092          159 -------QPIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKR------------  218 (307)
Q Consensus       159 -------~t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~------------  218 (307)
                             +|+.|+|||.+.+ ..++.++|||||||++|||++|+.||......+.   ...+......            
T Consensus       186 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~  262 (364)
T 3qyz_A          186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ---LNHILGILGSPSQEDLNCIINL  262 (364)
T ss_dssp             CTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGH---HHHHHHHHCSCCHHHHHTCCCH
T ss_pred             ccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHH---HHHHHHHhCCCCHHHHHHhhhh
Confidence                   0677999998765 4589999999999999999999999965432221   1111111000            


Q ss_pred             --hhhhcccc-cC-----CCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          219 --ARKLNGAS-CS-----KFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       219 --~~~~~~~~-~~-----~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                        ........ ..     .+....+..+.+++..|+ +.||.+||++.++++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L-~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML-TFNPHKRIEVEQALA  313 (364)
T ss_dssp             HHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHT-CSSTTTSCCHHHHHT
T ss_pred             hHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHc-CCChhhCCCHHHHhc
Confidence              00000000 00     011233457899999999 999999999999986

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.90  E-value=4.2e-24  Score=192.84  Aligned_cols=161  Identities=18%  Similarity=0.193  Sum_probs=127.0

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK----  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~----  158 (307)
                      .++|...+.||+|+||.||++... +|+.||+|.++...   ....+.+.+|+.++..++||||+++++++.+...    
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv   84 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   84 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence            467899999999999999999954 78999999986432   2345678899999999999999999998865411    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        85 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~~  164 (318)
T 1fot_A           85 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLC  164 (318)
T ss_dssp             ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCC
T ss_pred             EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCcccccc
Confidence                                                                                            


Q ss_pred             CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHH
Q 045092          159 QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRT  238 (307)
Q Consensus       159 ~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  238 (307)
                      +|+.|+|||.+.+..++.++|||||||++|||++|+.||.....      ......... +       ...++..++..+
T Consensus       165 gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~i~~-~-------~~~~p~~~~~~~  230 (318)
T 1fot_A          165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT------MKTYEKILN-A-------ELRFPPFFNEDV  230 (318)
T ss_dssp             SCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHH-C-------CCCCCTTSCHHH
T ss_pred             CCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH------HHHHHHHHh-C-------CCCCCCCCCHHH
Confidence            08889999999999999999999999999999999999964321      111111111 1       122344566789


Q ss_pred             HHHhccccCCCCCCCCC-----CHHHHHH
Q 045092          239 SDGNDQCSSSVTPTNRP-----LMSFVVS  262 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RP-----s~~~vl~  262 (307)
                      .+++..|+ ..||.+||     ++.++++
T Consensus       231 ~~li~~lL-~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          231 KDLLSRLI-TRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             HHHHHHHT-CSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHHHHh-ccCHHHcCCCcCCCHHHHhc
Confidence            99999999 99999999     8888874

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.90  E-value=1.5e-23  Score=190.96  Aligned_cols=172  Identities=16%  Similarity=0.160  Sum_probs=119.1

Q ss_pred             HHhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChh-----cHHHHHHHHHHHhhCCCCCccceeeeeecCCC
Q 045092           85 AATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQ-----GNREIVNEIGMISALQHPNLVKLYRLCTETLK  158 (307)
Q Consensus        85 ~~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  158 (307)
                      ...++|...+.||+|+||.||+|.. .+|+.||||.+......     ..+.+.+|+.++.+++|+||+++++++.+...
T Consensus         7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (346)
T 1ua2_A            7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN   86 (346)
T ss_dssp             ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred             HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence            3457899999999999999999995 47899999998643221     12468899999999999999999998865421


Q ss_pred             C-------------------------------------------------------------------------------
Q 045092          159 Q-------------------------------------------------------------------------------  159 (307)
Q Consensus       159 ~-------------------------------------------------------------------------------  159 (307)
                      .                                                                               
T Consensus        87 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~  166 (346)
T 1ua2_A           87 ISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN  166 (346)
T ss_dssp             CEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC
T ss_pred             eEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCc
Confidence            1                                                                               


Q ss_pred             --------CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhh-----ccc
Q 045092          160 --------PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKL-----NGA  225 (307)
Q Consensus       160 --------t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~  225 (307)
                              |+.|+|||.+.+. .++.++|||||||++|||++|..||.....      .+.+...+......     ...
T Consensus       167 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~------~~~~~~i~~~~~~~~~~~~~~~  240 (346)
T 1ua2_A          167 RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD------LDQLTRIFETLGTPTEEQWPDM  240 (346)
T ss_dssp             CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHHHCCCCTTTSSST
T ss_pred             ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHHHcCCCChhhhhhh
Confidence                    7789999998754 589999999999999999999999854321      11122222110000     000


Q ss_pred             ------c----cCCC-----chhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          226 ------S----CSKF-----GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       226 ------~----~~~l-----~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                            .    .+..     ....+..+.+++..|+ +.||.+|||+.|+++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L-~~dP~~Rpt~~ell~h  292 (346)
T 1ua2_A          241 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLF-LFNPCARITATQALKM  292 (346)
T ss_dssp             TSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHH-CSSTTTSCCHHHHHTS
T ss_pred             ccCcccccccccCCCChHHhhccCCHHHHHHHHHHh-ccChhhCCCHHHHhcC
Confidence                  0    0000     1233458999999999 9999999999999874

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.90  E-value=2.8e-24  Score=201.11  Aligned_cols=169  Identities=15%  Similarity=0.174  Sum_probs=123.5

Q ss_pred             HHhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC--------hhcHHHHHHHHHHHhhCCCCCccceeeeeec
Q 045092           85 AATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS--------KQGNREIVNEIGMISALQHPNLVKLYRLCTE  155 (307)
Q Consensus        85 ~~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~  155 (307)
                      ...++|...+.||+|+||.||+|.. .+++.||||++....        ......+.+|+.+|.+++||||+++++++..
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~  211 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA  211 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence            3468899999999999999999995 478999999986431        1112358899999999999999999998754


Q ss_pred             CCC-----------------------------------------------------------------------------
Q 045092          156 TLK-----------------------------------------------------------------------------  158 (307)
Q Consensus       156 ~~~-----------------------------------------------------------------------------  158 (307)
                      ...                                                                             
T Consensus       212 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~  291 (419)
T 3i6u_A          212 EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI  291 (419)
T ss_dssp             SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTS
T ss_pred             CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeeccccee
Confidence            310                                                                             


Q ss_pred             -----------CCccccchhhhc---cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcc
Q 045092          159 -----------QPIVYMAPEYAK---HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNG  224 (307)
Q Consensus       159 -----------~t~~y~aPE~~~---~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  224 (307)
                                 +|+.|+|||++.   .+.++.++|||||||++|||++|+.||.......  .+..    .+..+.   .
T Consensus       292 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~--~~~~----~i~~~~---~  362 (419)
T 3i6u_A          292 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKD----QITSGK---Y  362 (419)
T ss_dssp             CC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC--CHHH----HHHTTC---C
T ss_pred             cCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH--HHHH----HHhcCC---C
Confidence                       078899999885   3678899999999999999999999996433221  2211    111111   0


Q ss_pred             cccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          225 ASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       225 ~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ...+......+..+.+++..|+ +.||.+||++.++++.
T Consensus       363 ~~~~~~~~~~~~~~~~li~~~L-~~dP~~Rps~~e~l~h  400 (419)
T 3i6u_A          363 NFIPEVWAEVSEKALDLVKKLL-VVDPKARFTTEEALRH  400 (419)
T ss_dssp             CCCHHHHTTSCHHHHHHHHHHS-CSSTTTSCCHHHHHHS
T ss_pred             CCCchhhcccCHHHHHHHHHHc-cCChhHCcCHHHHhCC
Confidence            1111111234568999999999 9999999999999863

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.90  E-value=1.6e-24  Score=196.78  Aligned_cols=156  Identities=15%  Similarity=0.196  Sum_probs=123.9

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCCh--------hcHHHHHHHHHHHhhCCCCCccceeeeeecCC
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSK--------QGNREIVNEIGMISALQHPNLVKLYRLCTETL  157 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~  157 (307)
                      .++|...+.||+|+||.||+|.. .+++.||||.+.....        .....+.+|+.++.+++|+||+++++++.+..
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG  102 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence            56799999999999999999994 4788999999875421        12346788999999999999999999886541


Q ss_pred             CC------------------------------------------------------------------------------
Q 045092          158 KQ------------------------------------------------------------------------------  159 (307)
Q Consensus       158 ~~------------------------------------------------------------------------------  159 (307)
                      ..                                                                              
T Consensus       103 ~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~  182 (335)
T 3dls_A          103 FFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER  182 (335)
T ss_dssp             EEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCC
Confidence            10                                                                              


Q ss_pred             ---------CccccchhhhccCCC-CchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC
Q 045092          160 ---------PIVYMAPEYAKHGYL-TDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK  229 (307)
Q Consensus       160 ---------t~~y~aPE~~~~~~~-~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  229 (307)
                               |+.|+|||.+.+..+ +.++|||||||++|||++|+.||......                  .....  .
T Consensus       183 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------------------~~~~~--~  242 (335)
T 3dls_A          183 GKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------------------VEAAI--H  242 (335)
T ss_dssp             TCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------------------TTTCC--C
T ss_pred             CCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------------------Hhhcc--C
Confidence                     789999999988776 78999999999999999999999532110                  11111  1


Q ss_pred             CchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          230 FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       230 l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .+..++..+.+++..|+ +.||.+||++.++++.
T Consensus       243 ~~~~~~~~l~~li~~~L-~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          243 PPYLVSKELMSLVSGLL-QPVPERRTTLEKLVTD  275 (335)
T ss_dssp             CSSCCCHHHHHHHHHHT-CSSGGGSCCHHHHHHC
T ss_pred             CCcccCHHHHHHHHHHc-cCChhhCcCHHHHhcC
Confidence            12335668999999999 9999999999999875

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.90  E-value=2e-24  Score=195.39  Aligned_cols=163  Identities=18%  Similarity=0.207  Sum_probs=107.8

Q ss_pred             CCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCC-CCCccceeeeeecCCCC-----------
Q 045092           93 ENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQ-HPNLVKLYRLCTETLKQ-----------  159 (307)
Q Consensus        93 ~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~-----------  159 (307)
                      .+.||+|+||.||+|... +++.||||++...   ....+.+|+.++..+. ||||+++++++.+....           
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~   92 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE   92 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence            478999999999999964 7899999998543   3467889999999996 99999999998765110           


Q ss_pred             -------------------------------------------------------------------------------C
Q 045092          160 -------------------------------------------------------------------------------P  160 (307)
Q Consensus       160 -------------------------------------------------------------------------------t  160 (307)
                                                                                                     |
T Consensus        93 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t  172 (325)
T 3kn6_A           93 LFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFT  172 (325)
T ss_dssp             HHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----------
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCCC
Confidence                                                                                           7


Q ss_pred             ccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHH
Q 045092          161 IVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSD  240 (307)
Q Consensus       161 ~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  240 (307)
                      +.|+|||.+.+..++.++|||||||++|||++|+.||..........-...+...+..+.   ..........++..+.+
T Consensus       173 ~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~~~~~s~~~~~  249 (325)
T 3kn6_A          173 LHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGD---FSFEGEAWKNVSQEAKD  249 (325)
T ss_dssp             -----------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTC---CCCCSHHHHTSCHHHHH
T ss_pred             cCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCC---CCCCcccccCCCHHHHH
Confidence            789999999999999999999999999999999999965432211111111111121111   00111111234568999


Q ss_pred             HhccccCCCCCCCCCCHHHHHH
Q 045092          241 GNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       241 l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ++..|+ +.||.+||++.++++
T Consensus       250 li~~~L-~~dP~~Rpt~~ell~  270 (325)
T 3kn6_A          250 LIQGLL-TVDPNKRLKMSGLRY  270 (325)
T ss_dssp             HHHHHH-CCCTTTCCCTTTSTT
T ss_pred             HHHHHC-CCChhHCCCHHHHhc
Confidence            999999 999999999999874

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.90  E-value=9.3e-24  Score=191.04  Aligned_cols=170  Identities=14%  Similarity=0.194  Sum_probs=122.5

Q ss_pred             HHhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCCh--hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           85 AATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSK--QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        85 ~~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      ...++|...+.||+|+||.||+|.. .+++.||||++.....  ...+.+.+|+.++.+++|+||+++++++.+....  
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  110 (329)
T 3gbz_A           31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL  110 (329)
T ss_dssp             -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred             cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence            3457899999999999999999994 4789999999975432  2245688999999999999999999988654110  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       111 v~e~~~~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~  190 (329)
T 3gbz_A          111 IFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIP  190 (329)
T ss_dssp             EEECCSEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC--
T ss_pred             EEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCc
Confidence                                                                                            


Q ss_pred             ---------CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcc-----
Q 045092          160 ---------PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNG-----  224 (307)
Q Consensus       160 ---------t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----  224 (307)
                               |+.|+|||.+.+. .++.++|||||||+++||++|+.||......      +.+........ ...     
T Consensus       191 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~~~~~~~-~~~~~~~~  263 (329)
T 3gbz_A          191 IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI------DQLFKIFEVLG-LPDDTTWP  263 (329)
T ss_dssp             ---------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHHHC-CCCTTTST
T ss_pred             ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH------HHHHHHHHHhC-CCchhhhh
Confidence                     7789999999874 4899999999999999999999999643221      11111111100 000     


Q ss_pred             --------------cccCC----CchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          225 --------------ASCSK----FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       225 --------------~~~~~----l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                                    .....    +....+..+.+++..|+ +.||.+|||+.|+++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L-~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAML-EMDPVKRISAKNALE  318 (329)
T ss_dssp             TGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHT-CSSGGGSCCHHHHHT
T ss_pred             hhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHc-cCChhhCCCHHHHhC
Confidence                          00000    01113457889999999 999999999999986

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.90  E-value=5.1e-24  Score=194.80  Aligned_cols=161  Identities=17%  Similarity=0.171  Sum_probs=127.5

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      .++|...+.||+|+||.||++... +|+.||||++....   ....+.+.+|+.++.+++||||+++++++.+....   
T Consensus        40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv  119 (350)
T 1rdq_E           40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV  119 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence            367899999999999999999964 78999999986432   23456789999999999999999999988754110   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       120 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~~  199 (350)
T 1rdq_E          120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC  199 (350)
T ss_dssp             EECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCE
T ss_pred             EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCCccccc
Confidence                                                                                            


Q ss_pred             -CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHH
Q 045092          160 -PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRT  238 (307)
Q Consensus       160 -t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  238 (307)
                       |+.|+|||.+.+..++.++|||||||++|||++|+.||.....      .. +...+..+       ...++..++..+
T Consensus       200 gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~-~~~~i~~~-------~~~~p~~~~~~~  265 (350)
T 1rdq_E          200 GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP------IQ-IYEKIVSG-------KVRFPSHFSSDL  265 (350)
T ss_dssp             ECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HH-HHHHHHHC-------CCCCCTTCCHHH
T ss_pred             CCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH------HH-HHHHHHcC-------CCCCCCCCCHHH
Confidence             8889999999999999999999999999999999999964321      11 11111111       123344567789


Q ss_pred             HHHhccccCCCCCCCCCC-----HHHHHH
Q 045092          239 SDGNDQCSSSVTPTNRPL-----MSFVVS  262 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RPs-----~~~vl~  262 (307)
                      .+++..|+ +.||.+||+     +.++++
T Consensus       266 ~~li~~lL-~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          266 KDLLRNLL-QVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             HHHHHHHS-CSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHHHHh-hcCHHhccCCccCCHHHHHh
Confidence            99999999 999999998     888865

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.90  E-value=1.1e-23  Score=186.77  Aligned_cols=160  Identities=21%  Similarity=0.314  Sum_probs=121.3

Q ss_pred             cccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC--------
Q 045092           90 FASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK--------  158 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~--------  158 (307)
                      |...+.||+|+||.||+|.. .++..||+|.+...  .....+.+.+|+.++.+++|+||+++++++.....        
T Consensus        28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv  107 (290)
T 1t4h_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence            66678899999999999995 47889999998643  33445679999999999999999999987654210        


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       108 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~  187 (290)
T 1t4h_A          108 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFA  187 (290)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSB
T ss_pred             EEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccccccc
Confidence                                                                                            


Q ss_pred             ----CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          159 ----QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       159 ----~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                          +|+.|+|||.+. +.++.++||||||+++++|++|+.||......     .. ....+.     .......+....
T Consensus       188 ~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-----~~-~~~~~~-----~~~~~~~~~~~~  255 (290)
T 1t4h_A          188 KAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA-----AQ-IYRRVT-----SGVKPASFDKVA  255 (290)
T ss_dssp             EESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-----HH-HHHHHT-----TTCCCGGGGGCC
T ss_pred             ccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH-----HH-HHHHHh-----ccCCccccCCCC
Confidence                078899999876 56999999999999999999999999542211     11 111111     111122223334


Q ss_pred             HHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      +..+.+++..|+ +.||.+||++.++++
T Consensus       256 ~~~l~~li~~~l-~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          256 IPEVKEIIEGCI-RQNKDERYSIKDLLN  282 (290)
T ss_dssp             CHHHHHHHHHHS-CSSGGGSCCHHHHHT
T ss_pred             CHHHHHHHHHHc-cCChhhCCCHHHHhh
Confidence            458999999999 999999999999986

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.90  E-value=7.8e-24  Score=191.55  Aligned_cols=173  Identities=18%  Similarity=0.313  Sum_probs=125.2

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      .++|...+.||+|+||.||+|... +++.||||++....  ....+.+.+|+.++.+++|+||+++++++.+....    
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  103 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF  103 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence            467888999999999999999964 68999999986442  23345688999999999999999999998764210    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       104 e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  183 (331)
T 4aaa_A          104 EFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDD  183 (331)
T ss_dssp             ECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC------------
T ss_pred             ecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccccCC
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHH----------HHHHHhhhhhccc
Q 045092          160 ---PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWL----------GSYLKRARKLNGA  225 (307)
Q Consensus       160 ---t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~----------~~~~~~~~~~~~~  225 (307)
                         |+.|+|||.+.+. .++.++|||||||++|||++|+.||.......  .+....          ...+.........
T Consensus       184 ~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (331)
T 4aaa_A          184 EVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID--QLYHIMMCLGNLIPRHQELFNKNPVFAGV  261 (331)
T ss_dssp             CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCSCCHHHHHHHHHCGGGTTC
T ss_pred             CcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH--HHHHHHHHhCCCChhhhhHhhhccccccc
Confidence               7789999998865 78999999999999999999999996433211  111100          0011111101111


Q ss_pred             ccCCC---------chhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          226 SCSKF---------GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       226 ~~~~l---------~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ..+.+         ...++..+.+++..|+ +.||.+||++.|+++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~L-~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          262 RLPEIKEREPLERRYPKLSEVVIDLAKKCL-HIDPDKRPFCAELLH  306 (331)
T ss_dssp             CCCCCSSCCCHHHHSTTSCHHHHHHHHHHT-CSSGGGSCCGGGGGG
T ss_pred             cCccccccchhhhcccchhHHHHHHHHHHh-ccCcccCCCHHHHhc
Confidence            11111         0123458999999999 999999999999875

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.90  E-value=1.1e-23  Score=193.74  Aligned_cols=170  Identities=17%  Similarity=0.212  Sum_probs=126.2

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      .++|...+.||+|+||.||+|.. .+|+.||||++...  .....+.+.+|+.++..++|+||+++++++......    
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            46899999999999999999995 47899999998753  233356789999999999999999999987643210    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       121 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~  200 (371)
T 4exu_A          121 DFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTG  200 (371)
T ss_dssp             CCEEEEECCCEEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC--------C
T ss_pred             eEEEEEccccccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccccCcCC
Confidence                                                                                            


Q ss_pred             ---Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhh---------------
Q 045092          160 ---PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRAR---------------  220 (307)
Q Consensus       160 ---t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~---------------  220 (307)
                         |+.|+|||.+.+ ..++.++|||||||+++||++|+.||......      +.+........               
T Consensus       201 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~i~~~~~~~~~~~~~~~~~~~~  274 (371)
T 4exu_A          201 YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL------DQLTQILKVTGVPGTEFVQKLNDKAA  274 (371)
T ss_dssp             TTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHHHCCCCHHHHTTCSCHHH
T ss_pred             cccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHHHHhCCCcHHHHHHhhhhhh
Confidence               788999999887 67899999999999999999999999643211      11111111000               


Q ss_pred             -----hhcccccCC---CchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          221 -----KLNGASCSK---FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       221 -----~~~~~~~~~---l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                           .+.......   +....+..+.+++..|+ +.||.+||++.|+++.
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L-~~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          275 KSYIQSLPQTPRKDFTQLFPRASPQAADLLEKML-ELDVDKRLTAAQALTH  324 (371)
T ss_dssp             HHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHS-CSCTTTSCCHHHHHTS
T ss_pred             hhhhhccCCCcchhHHHhccccChHHHHHHHHHC-CCChhhcCCHHHHhcC
Confidence                 000000000   11223558899999999 9999999999999863

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.90  E-value=1.4e-23  Score=189.29  Aligned_cols=170  Identities=12%  Similarity=0.178  Sum_probs=124.6

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCC-CCCccceeeeeecCCCC------
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQ-HPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~------  159 (307)
                      ++|...+.||+|+||.||+|.. .+++.||||+++..   ..+.+.+|+.++.+++ |+||+++++++.+....      
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~  112 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  112 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence            6789999999999999999984 57899999998643   3467899999999996 99999999998763111      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       113 e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  192 (330)
T 3nsz_A          113 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVA  192 (330)
T ss_dssp             ECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCS
T ss_pred             eccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccccccc
Confidence                                                                                            


Q ss_pred             Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHH--------HHHHhhh----------
Q 045092          160 PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLG--------SYLKRAR----------  220 (307)
Q Consensus       160 t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~--------~~~~~~~----------  220 (307)
                      |..|+|||.+.+ ..++.++|||||||+++||++|+.||....... ..+.....        ..+....          
T Consensus       193 ~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (330)
T 3nsz_A          193 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY-DQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI  271 (330)
T ss_dssp             CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHH-HHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHH
T ss_pred             cccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchH-HHHHHHHHhcCCchhhhHHHHhccccccchhhh
Confidence            777999999876 678999999999999999999999995332211 11111000        0000000          


Q ss_pred             -------hhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          221 -------KLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       221 -------~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                             .............++..+.+++..|+ +.||.+|||+.|+++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L-~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          272 LGRHSRKRWERFVHSENQHLVSPEALDFLDKLL-RYDHQSRLTAREAME  319 (330)
T ss_dssp             HCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTS-CSSGGGSCCHHHHHT
T ss_pred             hhhccccchhhhccccccccCCHHHHHHHHHHh-cCCcccCCCHHHHhc
Confidence                   00011111112224568999999999 999999999999986

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.90  E-value=1.2e-23  Score=191.83  Aligned_cols=170  Identities=15%  Similarity=0.193  Sum_probs=122.9

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      .++|...+.||+|+||.||+|.. .+++.||||++....  ......+.+|+.++.+++|+||+++++++.....     
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence            46799999999999999999996 578999999986442  2234578899999999999999999998765210     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        96 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~  175 (351)
T 3mi9_A           96 KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS  175 (351)
T ss_dssp             -CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             CceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhccccc
Confidence                                                                                            


Q ss_pred             --------------CCccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhc
Q 045092          159 --------------QPIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLN  223 (307)
Q Consensus       159 --------------~t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  223 (307)
                                    +|+.|+|||.+.+ ..++.++|||||||+++||++|+.||.......   ....+......   ..
T Consensus       176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~i~~~~~~---~~  249 (351)
T 3mi9_A          176 LAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH---QLALISQLCGS---IT  249 (351)
T ss_dssp             CCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCC---CC
T ss_pred             ccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCC---CC
Confidence                          0667999998875 458999999999999999999999996433211   11111111100   00


Q ss_pred             ccccCCC-------------------chh-----hHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          224 GASCSKF-------------------GFK-----FYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       224 ~~~~~~l-------------------~~~-----~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ....+..                   ...     .+..+.+++..|+ +.||.+||++.|+++.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L-~~dP~~R~t~~e~l~h  312 (351)
T 3mi9_A          250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLL-VLDPAQRIDSDDALNH  312 (351)
T ss_dssp             TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHS-CSSGGGSCCHHHHHTS
T ss_pred             hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHh-cCChhhCCCHHHHhCC
Confidence            0000000                   000     1336889999999 9999999999999863

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.90  E-value=6.2e-24  Score=187.79  Aligned_cols=161  Identities=17%  Similarity=0.252  Sum_probs=126.8

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      .++|...+.||+|+||.||+|... ++..||||.+....   ......+.+|+.++.+++|+||+++++++.+....   
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   92 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM   92 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence            367899999999999999999964 67889999985431   22346789999999999999999999988754110   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  172 (284)
T 2vgo_A           93 LEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTM  172 (284)
T ss_dssp             ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCCC
T ss_pred             EEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcccccccc
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHH
Q 045092          160 --PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRR  237 (307)
Q Consensus       160 --t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  237 (307)
                        ++.|+|||.+.+..++.++||||||++++||++|+.||.....      .+. ...+..       .+..++...+..
T Consensus       173 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~-~~~~~~-------~~~~~~~~~~~~  238 (284)
T 2vgo_A          173 CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH------TET-HRRIVN-------VDLKFPPFLSDG  238 (284)
T ss_dssp             CSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HHH-HHHHHT-------TCCCCCTTSCHH
T ss_pred             cCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH------hHH-HHHHhc-------cccCCCCcCCHH
Confidence              7789999999999999999999999999999999999964321      111 111111       122334456678


Q ss_pred             HHHHhccccCCCCCCCCCCHHHHHH
Q 045092          238 TSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       238 ~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      +.+++..|+ +.||.+||++.++++
T Consensus       239 ~~~li~~~l-~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          239 SKDLISKLL-RYHPPQRLPLKGVME  262 (284)
T ss_dssp             HHHHHHHHS-CSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHh-hcCHhhCCCHHHHhh
Confidence            999999999 999999999999975

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.90  E-value=7.4e-24  Score=196.68  Aligned_cols=179  Identities=12%  Similarity=0.119  Sum_probs=132.2

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      +.|.+.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++.+++|+||+++++++......      
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~   88 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence            56888999999999999999964 68999999987543 23456788999999999999999999987653210      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~  168 (396)
T 4eut_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED  168 (396)
T ss_dssp             CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCC
T ss_pred             ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccC
Confidence                                                                                            


Q ss_pred             ---------Cccccchhhhcc--------CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhh-
Q 045092          160 ---------PIVYMAPEYAKH--------GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARK-  221 (307)
Q Consensus       160 ---------t~~y~aPE~~~~--------~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~-  221 (307)
                               |+.|+|||.+..        +.++.++|||||||++|||++|+.||........  ..+.+...+..... 
T Consensus       169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~--~~~~~~~~~~~~p~~  246 (396)
T 4eut_A          169 DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR--NKEVMYKIITGKPSG  246 (396)
T ss_dssp             GGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTT--CHHHHHHHHHSCCTT
T ss_pred             CCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccc--hHHHHHHHhcCCCcc
Confidence                     788999998865        5678899999999999999999999964332221  11222222221100 


Q ss_pred             -h---------------cccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          222 -L---------------NGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       222 -~---------------~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                       +               .......+....+..+.+++..|+ +.||++||++.++++.+.++.+
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L-~~dP~~R~s~~e~l~~l~~il~  309 (396)
T 4eut_A          247 AISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANIL-EADQEKCWGFDQFFAETSDILH  309 (396)
T ss_dssp             CCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHS-CCCTTTSCCHHHHHHHHHHHHT
T ss_pred             cchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhh-ccChhhhccHHHHHHHHHHHhh
Confidence             0               000111233455668899999999 9999999999999988876543

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.90  E-value=7.6e-24  Score=194.84  Aligned_cols=173  Identities=16%  Similarity=0.199  Sum_probs=121.3

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      .++|...+.||+|+||.||+|.. .+|+.||||++...  .....+.+.+|+.+++.++|+||+++++++.....     
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            47899999999999999999994 47899999998653  33445678999999999999999999998754200     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       108 ~~~lv~e~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~  187 (367)
T 2fst_X          108 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT  187 (367)
T ss_dssp             CCEEEEECCCEECC-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC------------
T ss_pred             eEEEEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccccccccCC
Confidence                                                                                            


Q ss_pred             ---CCccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhh--------------h
Q 045092          159 ---QPIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRA--------------R  220 (307)
Q Consensus       159 ---~t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~--------------~  220 (307)
                         .|+.|+|||.+.+ ..++.++|||||||+++||++|+.||.......   ....+...+...              .
T Consensus       188 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~l~~i~~~~g~p~~~~~~~~~~~~~~~  264 (367)
T 2fst_X          188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID---QLKLILRLVGTPGAELLKKISSESARN  264 (367)
T ss_dssp             ---CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCSCCHHHHTTCCCHHHHH
T ss_pred             CcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCCHHHHHHhhhHHHHH
Confidence               0788999999876 678999999999999999999999996433211   111111110000              0


Q ss_pred             ---hhcccccCCC---chhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          221 ---KLNGASCSKF---GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       221 ---~~~~~~~~~l---~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                         .+.......+   ....+..+.+++.+|+ ..||.+|||+.++++.
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL-~~dP~~R~t~~e~L~h  312 (367)
T 2fst_X          265 YIQSLTQMPKMNFANVFIGANPLAVDLLEKML-VLDSDKRITAAQALAH  312 (367)
T ss_dssp             HHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHS-CSSGGGSCCHHHHHTS
T ss_pred             HHhccCCCCCCCHHHHCCCCCHHHHHHHHHhC-CCCcccCcCHHHHhcC
Confidence               0000000000   1123447899999999 9999999999999863

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.90  E-value=7.7e-24  Score=187.36  Aligned_cols=164  Identities=19%  Similarity=0.210  Sum_probs=118.8

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC-hhcH-HHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS-KQGN-REIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~-~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      .++|+..+.||+|+||.||++.. .+++.||||++.... .... +.+.++...+..++||||+++++++.+....    
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence            56889999999999999999995 478999999987542 2222 3345555567888999999999988654111    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        86 e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  165 (290)
T 3fme_A           86 ELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA  165 (290)
T ss_dssp             ECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC-----------
T ss_pred             ehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccccccccc
Confidence                                                                                            


Q ss_pred             ------Cccccchhhh----ccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC
Q 045092          160 ------PIVYMAPEYA----KHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK  229 (307)
Q Consensus       160 ------t~~y~aPE~~----~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  229 (307)
                            |+.|+|||.+    .++.++.++||||||++++||++|+.||......     ...+.....      ......
T Consensus       166 ~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~------~~~~~~  234 (290)
T 3fme_A          166 KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-----FQQLKQVVE------EPSPQL  234 (290)
T ss_dssp             ----CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-----HHHHHHHHH------SCCCCC
T ss_pred             ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch-----HHHHHHHhc------cCCCCc
Confidence                  7889999996    4567899999999999999999999999632211     111111111      111111


Q ss_pred             CchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          230 FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       230 l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ....++..+.+++..|+ +.||.+||++.++++
T Consensus       235 ~~~~~~~~~~~li~~~l-~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          235 PADKFSAEFVDFTSQCL-KKNSKERPTYPELMQ  266 (290)
T ss_dssp             CTTTSCHHHHHHHHHHT-CSSGGGSCCHHHHTT
T ss_pred             ccccCCHHHHHHHHHHh-hcChhhCcCHHHHHh
Confidence            12345668999999999 999999999999975

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.90  E-value=4.4e-24  Score=203.09  Aligned_cols=164  Identities=19%  Similarity=0.263  Sum_probs=126.2

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      .+.|...+.||+|+||.||+|... +++.||||++....   ....+.+.+|+.++.+++||||+++++++.+....   
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  104 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV  104 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            467899999999999999999964 78999999986432   33467899999999999999999999988764110   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       105 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~  184 (484)
T 3nyv_A          105 GEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK  184 (484)
T ss_dssp             ECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCS
T ss_pred             EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccc
Confidence                                                                                            


Q ss_pred             ------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchh
Q 045092          160 ------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFK  233 (307)
Q Consensus       160 ------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  233 (307)
                            |+.|+|||.+.+ .++.++||||+||++|+|++|+.||.....      .+ +...+..+. .  .........
T Consensus       185 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~-~~~~i~~~~-~--~~~~~~~~~  253 (484)
T 3nyv_A          185 MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE------YD-ILKKVEKGK-Y--TFELPQWKK  253 (484)
T ss_dssp             HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HH-HHHHHHHCC-C--CCCSGGGGG
T ss_pred             cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH------HH-HHHHHHcCC-C--CCCCccccc
Confidence                  788999998865 799999999999999999999999964322      11 111122211 0  011111134


Q ss_pred             hHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          234 FYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       234 ~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ++..+.+++..|+ +.||.+|||+.++++
T Consensus       254 ~s~~~~~li~~~L-~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          254 VSESAKDLIRKML-TYVPSMRISARDALD  281 (484)
T ss_dssp             SCHHHHHHHHHHT-CSSGGGSCCHHHHHT
T ss_pred             CCHHHHHHHHHHC-CCChhHCcCHHHHhh
Confidence            5568999999999 999999999999985

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.90  E-value=2.6e-24  Score=194.32  Aligned_cols=171  Identities=15%  Similarity=0.234  Sum_probs=121.5

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChh-cHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQ-GNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      ++|...+.||+|+||.||+|... +++.||||++...... ....+.+|+.++.+++|+||+++++++......      
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            57889999999999999999964 7899999998654322 122466899999999999999999988665211      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  161 (324)
T 3mtl_A           82 LDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEV  161 (324)
T ss_dssp             CSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC-----------
T ss_pred             cccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcccccccc
Confidence                                                                                            


Q ss_pred             -Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhh--hhc---------ccc
Q 045092          160 -PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRAR--KLN---------GAS  226 (307)
Q Consensus       160 -t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~--~~~---------~~~  226 (307)
                       |+.|+|||.+.+ ..++.++|||||||+++||++|+.||.......   ....+........  ...         ...
T Consensus       162 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  238 (324)
T 3mtl_A          162 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE---QLHFIFRILGTPTEETWPGILSNEEFKTYN  238 (324)
T ss_dssp             -CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSTTGGGCHHHHHTC
T ss_pred             CcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCChHhchhhhcchhhcccc
Confidence             778999999876 568999999999999999999999996433211   1111111111000  000         000


Q ss_pred             cCC--------CchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          227 CSK--------FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       227 ~~~--------l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .+.        ....++..+.+++..|+ +.||.+|||+.|+++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~li~~~L-~~dP~~R~t~~e~l~  281 (324)
T 3mtl_A          239 YPKYRAEALLSHAPRLDSDGADLLTKLL-QFEGRNRISAEDAMK  281 (324)
T ss_dssp             CCCCCCCCHHHHCTTSCHHHHHHHHHHS-CSSGGGSCCHHHHTT
T ss_pred             cccccchhhhhhcCCCCHHHHHHHHHHc-CcCcccCCCHHHHhc
Confidence            000        01123457889999999 999999999999976

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.90  E-value=5e-24  Score=189.31  Aligned_cols=162  Identities=14%  Similarity=0.152  Sum_probs=127.2

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      .++|...+.||+|+||.||++... +++.||+|.+...   .....+.+.+|+.++++++|+||+++++++.+....   
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            357888999999999999999964 6889999998643   233456789999999999999999999998764210   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        94 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~  173 (294)
T 2rku_A           94 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK  173 (294)
T ss_dssp             EECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred             EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCccccc
Confidence                                                                                            


Q ss_pred             ----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhH
Q 045092          160 ----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFY  235 (307)
Q Consensus       160 ----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  235 (307)
                          |+.|+|||.+.+..++.++||||||++++||++|+.||.....      .+.. ..+...       ...++...+
T Consensus       174 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~-~~~~~~-------~~~~~~~~~  239 (294)
T 2rku_A          174 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL------KETY-LRIKKN-------EYSIPKHIN  239 (294)
T ss_dssp             CCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHH-HHHHTT-------CCCCCTTSC
T ss_pred             cccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHH-HHHhhc-------cCCCccccC
Confidence                6779999999988899999999999999999999999964321      1111 111111       122334556


Q ss_pred             HHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          236 RRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       236 ~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ..+.+++..|+ +.||++||++.++++.
T Consensus       240 ~~~~~li~~~l-~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          240 PVAASLIQKML-QTDPTARPTINELLND  266 (294)
T ss_dssp             HHHHHHHHHHT-CSSGGGSCCGGGGGGS
T ss_pred             HHHHHHHHHHc-ccChhhCcCHHHHhhC
Confidence            68899999999 9999999999998763

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.90  E-value=7.1e-24  Score=201.87  Aligned_cols=165  Identities=18%  Similarity=0.257  Sum_probs=126.2

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      .++|.+.+.||+|+||.||+|... +++.||||++...  .......+.+|+.++.+++||||+++++++.+....    
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  100 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence            467999999999999999999964 7899999998532  223456899999999999999999999988764110    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       101 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~  180 (486)
T 3mwu_A          101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM  180 (486)
T ss_dssp             CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC---
T ss_pred             EcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCcc
Confidence                                                                                            


Q ss_pred             -----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          160 -----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       160 -----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                           |+.|+|||.+.+ .++.++||||+||++|+|++|+.||.....      .+.+ ..+..+. .  ..+......+
T Consensus       181 ~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~-~~i~~~~-~--~~~~~~~~~~  249 (486)
T 3mwu_A          181 KDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE------YDIL-KRVETGK-Y--AFDLPQWRTI  249 (486)
T ss_dssp             -CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHH-HHHHHTC-C--CSCSGGGGGS
T ss_pred             CCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHH-HHHHhCC-C--CCCCcccCCC
Confidence                 788999998864 699999999999999999999999964321      1111 1122111 0  1111112345


Q ss_pred             HHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      +..+.+++..|+ +.||.+|||+.++++.
T Consensus       250 s~~~~~li~~~L-~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          250 SDDAKDLIRKML-TFHPSLRITATQCLEH  277 (486)
T ss_dssp             CHHHHHHHHHHT-CSSTTTSCCHHHHHHC
T ss_pred             CHHHHHHHHHHc-CCChhhCcCHHHHhcC
Confidence            568999999999 9999999999999863

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.90  E-value=2.2e-24  Score=194.33  Aligned_cols=172  Identities=19%  Similarity=0.291  Sum_probs=128.0

Q ss_pred             cccHHHHHHHhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhC-CCCCccceeeeee
Q 045092           77 SFHLRQIKAATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISAL-QHPNLVKLYRLCT  154 (307)
Q Consensus        77 ~~~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~  154 (307)
                      .+++.++....++|...+.||+|+||.||+|.. .+++.||||.+.... .....+.+|+.++.++ +|+||+++++++.
T Consensus        13 ~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   91 (326)
T 2x7f_A           13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFI   91 (326)
T ss_dssp             ---CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEE
T ss_pred             hccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEe
Confidence            345555566688999999999999999999996 478999999986543 3456889999999999 8999999999986


Q ss_pred             cCCC----C-----------------------------------------------------------------------
Q 045092          155 ETLK----Q-----------------------------------------------------------------------  159 (307)
Q Consensus       155 ~~~~----~-----------------------------------------------------------------------  159 (307)
                      ....    .                                                                       
T Consensus        92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~  171 (326)
T 2x7f_A           92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLV  171 (326)
T ss_dssp             ECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEEC
T ss_pred             eccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEe
Confidence            5210    0                                                                       


Q ss_pred             --------------------Cccccchhhhc-----cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHH
Q 045092          160 --------------------PIVYMAPEYAK-----HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGS  214 (307)
Q Consensus       160 --------------------t~~y~aPE~~~-----~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~  214 (307)
                                          |+.|+|||.+.     ++.++.++|||||||++|||++|+.||......      .....
T Consensus       172 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~  245 (326)
T 2x7f_A          172 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM------RALFL  245 (326)
T ss_dssp             CCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHH
T ss_pred             eCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH------HHHHH
Confidence                                77899999987     567899999999999999999999999533211      11111


Q ss_pred             HHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          215 YLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       215 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                       +...     .........++..+.+++..|+ ..||.+||++.++++
T Consensus       246 -~~~~-----~~~~~~~~~~~~~l~~li~~~l-~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          246 -IPRN-----PAPRLKSKKWSKKFQSFIESCL-VKNHSQRPATEQLMK  286 (326)
T ss_dssp             -HHHS-----CCCCCSCSCSCHHHHHHHHHHC-CSSGGGSCCHHHHHT
T ss_pred             -hhcC-----ccccCCccccCHHHHHHHHHHh-ccChhhCCCHHHHhh
Confidence             1111     1111112345668999999999 999999999999986

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.90  E-value=2.9e-24  Score=196.64  Aligned_cols=161  Identities=16%  Similarity=0.198  Sum_probs=125.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC---ChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK---SKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK---  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~---  158 (307)
                      .++|...+.||+|+||.||++... +++.||||+++..   .......+.+|+.++..+ +||||+++++++.+...   
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            578999999999999999999954 7899999998643   223456788999999998 79999999998866411   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       102 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~  181 (353)
T 3txo_A          102 VMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTT  181 (353)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-----
T ss_pred             EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCCccc
Confidence                                                                                            


Q ss_pred             ----CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          159 ----QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       159 ----~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                          +|+.|+|||.+.+..++.++|||||||++|||++|+.||.....      .+... .+..+.       ..++...
T Consensus       182 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~------~~~~~-~i~~~~-------~~~p~~~  247 (353)
T 3txo_A          182 ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE------DDLFE-AILNDE-------VVYPTWL  247 (353)
T ss_dssp             ----CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHH-HHHHCC-------CCCCTTS
T ss_pred             cccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH------HHHHH-HHHcCC-------CCCCCCC
Confidence                08889999999988899999999999999999999999964322      11111 111111       2233445


Q ss_pred             HHHHHHHhccccCCCCCCCCCCH------HHHHH
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPLM------SFVVS  262 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs~------~~vl~  262 (307)
                      +..+.+++..|+ +.||.+||++      .++++
T Consensus       248 ~~~~~~li~~lL-~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          248 HEDATGILKSFM-TKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             CHHHHHHHHHHT-CSSGGGSTTSGGGTCTHHHHT
T ss_pred             CHHHHHHHHHHh-hhCHHHccCCcccCCHHHHhh
Confidence            668899999999 9999999998      67764

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.90  E-value=2.1e-23  Score=191.98  Aligned_cols=174  Identities=14%  Similarity=0.130  Sum_probs=124.8

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      .++|...+.||+|+||.||+|.. .+++.||||++...  .....+.+.+|+.+++.++||||+++++++.....     
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            46899999999999999999995 47889999998653  23345678999999999999999999998754321     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       104 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~  183 (371)
T 2xrw_A          104 DVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM  183 (371)
T ss_dssp             EEEEEEECCSEEHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC----------
T ss_pred             ceEEEEEcCCCCHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccccccccccc
Confidence                                                                                            


Q ss_pred             ----CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHH------------------HHHHH
Q 045092          159 ----QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDW------------------LGSYL  216 (307)
Q Consensus       159 ----~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~------------------~~~~~  216 (307)
                          +|+.|+|||.+.+..++.++|||||||+++||++|+.||........  +...                  +....
T Consensus       184 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~  261 (371)
T 2xrw_A          184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ--WNKVIEQLGTPCPEFMKKLQPTVRTYV  261 (371)
T ss_dssp             ------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHC-CCCCCHHHHTTSCHHHHHHH
T ss_pred             CCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHHHHHHhhhHHHHHH
Confidence                07789999999999999999999999999999999999964332110  0000                  00000


Q ss_pred             Hhhhh---------hcccccCCC---chhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          217 KRARK---------LNGASCSKF---GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       217 ~~~~~---------~~~~~~~~l---~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .....         ......+..   ....+..+.+++..|+ +.||.+|||+.++++.
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL-~~dP~~R~t~~e~l~h  319 (371)
T 2xrw_A          262 ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKML-VIDASKRISVDEALQH  319 (371)
T ss_dssp             HSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHS-CSSGGGSCCHHHHHHS
T ss_pred             hhCccccccchhhhcccccCcccccccccccHHHHHHHHHHC-cCChhhCCCHHHHhCC
Confidence            00000         000000000   0112457899999999 9999999999999863

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.90  E-value=1e-23  Score=188.87  Aligned_cols=169  Identities=17%  Similarity=0.206  Sum_probs=120.8

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-------
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-------  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-------  158 (307)
                      .++|...+.||+|+||.||+|... +++.||||.+........+.+.+|+.++.+++|+||+++++++.....       
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence            367888999999999999999965 589999999977666667889999999999999999999987632100       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        90 ~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~  169 (320)
T 2i6l_A           90 SLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLAR  169 (320)
T ss_dssp             -CCSCSEEEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCB
T ss_pred             cccccCceeEEeeccCCCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCcccc
Confidence                                                                                            


Q ss_pred             ----------------CCccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhh-
Q 045092          159 ----------------QPIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRAR-  220 (307)
Q Consensus       159 ----------------~t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~-  220 (307)
                                      .|..|+|||.+.. +.++.++||||||++++||++|+.||.......      .......... 
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~------~~~~~~~~~~~  243 (320)
T 2i6l_A          170 IMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE------QMQLILESIPV  243 (320)
T ss_dssp             CC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHHSCC
T ss_pred             ccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH------HHHHHHHhcCC
Confidence                            0566999998865 678999999999999999999999996433211      1111111000 


Q ss_pred             -------hhc---------ccccC-----CCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          221 -------KLN---------GASCS-----KFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       221 -------~~~---------~~~~~-----~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                             .+.         ....+     .+...++..+.+++..|+ +.||.+||++.++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L-~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          244 VHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQIL-TFSPMDRLTAEEALS  305 (320)
T ss_dssp             CCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTS-CSSGGGSCCHHHHHT
T ss_pred             CchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHc-CCCccccCCHHHHhC
Confidence                   000         00001     011234568999999999 999999999999976

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.90  E-value=9.4e-24  Score=200.49  Aligned_cols=161  Identities=17%  Similarity=0.181  Sum_probs=125.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK----  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~----  158 (307)
                      .++|.+.+.||+|+||.||+|... +|+.||||++....   ......+.+|+.+++.++||||+++++++.....    
T Consensus        15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv   94 (476)
T 2y94_A           15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV   94 (476)
T ss_dssp             ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            367889999999999999999964 79999999986432   1234678999999999999999999998865411    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        95 ~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~  174 (476)
T 2y94_A           95 MEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT  174 (476)
T ss_dssp             EECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCC
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhccccccccc
Confidence                                                                                            


Q ss_pred             --CCccccchhhhccCCC-CchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhH
Q 045092          159 --QPIVYMAPEYAKHGYL-TDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFY  235 (307)
Q Consensus       159 --~t~~y~aPE~~~~~~~-~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  235 (307)
                        +|+.|+|||.+.+..+ +.++|||||||++|||++|+.||......      . +...+..+.       ...+...+
T Consensus       175 ~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~------~-~~~~i~~~~-------~~~p~~~s  240 (476)
T 2y94_A          175 SCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP------T-LFKKICDGI-------FYTPQYLN  240 (476)
T ss_dssp             CCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH------H-HHHHHHTTC-------CCCCTTCC
T ss_pred             cCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH------H-HHHHHhcCC-------cCCCccCC
Confidence              0788999999987765 68999999999999999999999643211      1 111121111       12233455


Q ss_pred             HHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          236 RRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       236 ~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ..+.+++..|+ +.||.+||++.++++
T Consensus       241 ~~~~~Li~~~L-~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          241 PSVISLLKHML-QVDPMKRATIKDIRE  266 (476)
T ss_dssp             HHHHHHHHHHT-CSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHc-CCCchhCcCHHHHHh
Confidence            68899999999 999999999999986

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.90  E-value=7.7e-24  Score=202.09  Aligned_cols=164  Identities=16%  Similarity=0.225  Sum_probs=122.0

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      .+.|...+.||+|+||.||+|... ++..||||++....  ......+.+|+.+++.++||||+++++++.+....    
T Consensus        36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  115 (494)
T 3lij_A           36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM  115 (494)
T ss_dssp             HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            456899999999999999999964 78999999987542  33456799999999999999999999998764110    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       116 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~  195 (494)
T 3lij_A          116 ECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM  195 (494)
T ss_dssp             ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCB
T ss_pred             ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccc
Confidence                                                                                            


Q ss_pred             -----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          160 -----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       160 -----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                           |+.|+|||++. +.++.++||||+||++|+|++|+.||.....      .+ +...+..+.   ...+.......
T Consensus       196 ~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~-~~~~i~~~~---~~~~~~~~~~~  264 (494)
T 3lij_A          196 KERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD------QE-ILRKVEKGK---YTFDSPEWKNV  264 (494)
T ss_dssp             CCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HH-HHHHHHHTC---CCCCSGGGTTS
T ss_pred             cccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH------HH-HHHHHHhCC---CCCCchhcccC
Confidence                 88899999876 5799999999999999999999999964332      11 111222211   11111111235


Q ss_pred             HHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      +..+.+++..|+ +.||.+|||+.++++
T Consensus       265 s~~~~~li~~~L-~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          265 SEGAKDLIKQML-QFDSQRRISAQQALE  291 (494)
T ss_dssp             CHHHHHHHHHHT-CSSTTTSCCHHHHHT
T ss_pred             CHHHHHHHHHHC-CCChhhCccHHHHhc
Confidence            568899999999 999999999999875

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.90  E-value=4e-24  Score=193.06  Aligned_cols=169  Identities=25%  Similarity=0.363  Sum_probs=129.1

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCE--EEEEEccCC-ChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCC----
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKV--IEVKQLSSK-SKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETL----  157 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~--vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~----  157 (307)
                      .++|...+.||+|+||.||+|.. .++..  ||||.+... .....+.+.+|+.++.++ +||||+++++++.+..    
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l  103 (327)
T 1fvr_A           24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL  103 (327)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred             HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence            36788899999999999999995 35654  499988643 233456799999999999 9999999999875431    


Q ss_pred             -----------------C----------------C---------------------------------------------
Q 045092          158 -----------------K----------------Q---------------------------------------------  159 (307)
Q Consensus       158 -----------------~----------------~---------------------------------------------  159 (307)
                                       .                .                                             
T Consensus       104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL  183 (327)
T 1fvr_A          104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKI  183 (327)
T ss_dssp             EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEE
T ss_pred             EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEE
Confidence                             0                0                                             


Q ss_pred             --------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHh
Q 045092          160 --------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKR  218 (307)
Q Consensus       160 --------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~  218 (307)
                                          ++.|+|||.+.+..++.++||||||+++|||++ |+.||.....      .+ +...   
T Consensus       184 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~------~~-~~~~---  253 (327)
T 1fvr_A          184 ADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC------AE-LYEK---  253 (327)
T ss_dssp             CCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HH-HHHH---
T ss_pred             cccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH------HH-HHHH---
Confidence                                667999999998889999999999999999998 9999964321      11 1111   


Q ss_pred             hhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          219 ARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       219 ~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                         +........+..++..+.+++..|+ +.||.+||++.++++.|+....
T Consensus       254 ---~~~~~~~~~~~~~~~~l~~li~~~l-~~dp~~Rps~~ell~~L~~~~~  300 (327)
T 1fvr_A          254 ---LPQGYRLEKPLNCDDEVYDLMRQCW-REKPYERPSFAQILVSLNRMLE  300 (327)
T ss_dssp             ---GGGTCCCCCCTTBCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ---hhcCCCCCCCCCCCHHHHHHHHHHc-cCChhhCcCHHHHHHHHHHHHH
Confidence               2222233344556778999999999 9999999999999999887543

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.90  E-value=2.9e-24  Score=195.76  Aligned_cols=164  Identities=14%  Similarity=0.224  Sum_probs=124.5

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~-----  159 (307)
                      .++|...+.||+|+||.||++... +++.||||++.....    .+.+|++++.++ +||||+++++++.+....     
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E   96 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE   96 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence            567999999999999999999964 788999999965432    245688888888 799999999988764110     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        97 ~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~  176 (342)
T 2qr7_A           97 LMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL  176 (342)
T ss_dssp             CCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCC
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCc
Confidence                                                                                            


Q ss_pred             ------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchh
Q 045092          160 ------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFK  233 (307)
Q Consensus       160 ------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  233 (307)
                            |+.|+|||.+.+..++.++|||||||++|||++|+.||.........   + +...+..+.   ..........
T Consensus       177 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~---~-~~~~i~~~~---~~~~~~~~~~  249 (342)
T 2qr7_A          177 LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPE---E-ILARIGSGK---FSLSGGYWNS  249 (342)
T ss_dssp             BCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHH---H-HHHHHHHCC---CCCCSTTTTT
T ss_pred             eeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHH---H-HHHHHccCC---cccCcccccc
Confidence                  77899999998878899999999999999999999999643322211   1 122222221   1111112234


Q ss_pred             hHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          234 FYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       234 ~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ++..+.+++..|+ ..||.+||++.++++
T Consensus       250 ~s~~~~~li~~~L-~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          250 VSDTAKDLVSKML-HVDPHQRLTAALVLR  277 (342)
T ss_dssp             SCHHHHHHHHHHT-CSSTTTSCCHHHHTT
T ss_pred             CCHHHHHHHHHHC-CCChhHCcCHHHHhc
Confidence            5668999999999 999999999999875

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.90  E-value=5.8e-24  Score=192.87  Aligned_cols=161  Identities=14%  Similarity=0.155  Sum_probs=127.2

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      .++|...+.||+|+||.||++... +++.||+|.+...   .....+.+.+|+.++.+++|+||+++++++.+....   
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  119 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV  119 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            467888999999999999999964 6889999998643   233456789999999999999999999998764110   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       120 ~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~  199 (335)
T 2owb_A          120 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK  199 (335)
T ss_dssp             ECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred             EecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCccccc
Confidence                                                                                            


Q ss_pred             ----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhH
Q 045092          160 ----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFY  235 (307)
Q Consensus       160 ----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  235 (307)
                          |+.|+|||.+.+..++.++||||||+++|||++|+.||.....      .+... .+...       ...++..++
T Consensus       200 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~-~~~~~-------~~~~~~~~~  265 (335)
T 2owb_A          200 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL------KETYL-RIKKN-------EYSIPKHIN  265 (335)
T ss_dssp             CCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHH-HHHHT-------CCCCCTTSC
T ss_pred             ccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH------HHHHH-HHhcC-------CCCCCccCC
Confidence                6779999999998899999999999999999999999964321      11111 11111       122334556


Q ss_pred             HHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          236 RRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       236 ~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ..+.+++..|+ +.||.+||++.++++
T Consensus       266 ~~~~~li~~~l-~~dp~~Rps~~ell~  291 (335)
T 2owb_A          266 PVAASLIQKML-QTDPTARPTINELLN  291 (335)
T ss_dssp             HHHHHHHHHHT-CSSGGGSCCGGGGGG
T ss_pred             HHHHHHHHHHc-cCChhHCcCHHHHhc
Confidence            68899999999 999999999999976

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.90  E-value=3.1e-24  Score=202.27  Aligned_cols=161  Identities=17%  Similarity=0.161  Sum_probs=119.1

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      .++|...+.||+|+||.||++.. .+++.||||++...   .......+.+|+.++..++||||+++++++......   
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence            46799999999999999999995 47899999998643   233445788999999999999999999988654110   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       227 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  306 (446)
T 4ejn_A          227 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM  306 (446)
T ss_dssp             ECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----
T ss_pred             EeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCccc
Confidence                                                                                            


Q ss_pred             -----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          160 -----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       160 -----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                           |+.|+|||++.++.++.++|||||||++|||++|+.||.....      ..... .+...       ...++..+
T Consensus       307 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~-~i~~~-------~~~~p~~~  372 (446)
T 4ejn_A          307 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------EKLFE-LILME-------EIRFPRTL  372 (446)
T ss_dssp             CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHH-HHHHC-------CCCCCTTS
T ss_pred             ccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH------HHHHH-HHHhC-------CCCCCccC
Confidence                 8899999999999999999999999999999999999964321      11111 11111       12234456


Q ss_pred             HHHHHHHhccccCCCCCCCCC-----CHHHHHH
Q 045092          235 YRRTSDGNDQCSSSVTPTNRP-----LMSFVVS  262 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RP-----s~~~vl~  262 (307)
                      +..+.+++..|+ +.||.+||     ++.++++
T Consensus       373 ~~~~~~li~~~L-~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          373 GPEAKSLLSGLL-KKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             CHHHHHHHHHHT-CSSTTTSTTCSTTTHHHHHT
T ss_pred             CHHHHHHHHHHc-ccCHHHhCCCCCCCHHHHHh
Confidence            678999999999 99999999     9999876

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.90  E-value=1.4e-23  Score=189.02  Aligned_cols=166  Identities=15%  Similarity=0.170  Sum_probs=122.7

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh--------hcHHHHHHHHHHHhhCCCCCccceeeeeecCC
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK--------QGNREIVNEIGMISALQHPNLVKLYRLCTETL  157 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~  157 (307)
                      .++|...+.||+|+||.||+|... +++.||||.+.....        .....+.+|+.++.+++|+||+++++++....
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   88 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED   88 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence            467999999999999999999954 688999999864321        12345889999999999999999999875531


Q ss_pred             CC------------------------------------------------------------------------------
Q 045092          158 KQ------------------------------------------------------------------------------  159 (307)
Q Consensus       158 ~~------------------------------------------------------------------------------  159 (307)
                      ..                                                                              
T Consensus        89 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~  168 (322)
T 2ycf_A           89 YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG  168 (322)
T ss_dssp             EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECC
T ss_pred             eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceecc
Confidence            00                                                                              


Q ss_pred             ----------Cccccchhhhc---cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccc
Q 045092          160 ----------PIVYMAPEYAK---HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGAS  226 (307)
Q Consensus       160 ----------t~~y~aPE~~~---~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  226 (307)
                                |+.|+|||.+.   .+.++.++|||||||++|||++|+.||.......  .+..    .+..+.   ...
T Consensus       169 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~----~~~~~~---~~~  239 (322)
T 2ycf_A          169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKD----QITSGK---YNF  239 (322)
T ss_dssp             CCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS--CHHH----HHHHTC---CCC
T ss_pred             cccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH--HHHH----HHHhCc---ccc
Confidence                      78899999874   5678999999999999999999999996433221  1221    111111   011


Q ss_pred             cCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          227 CSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       227 ~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .+.....++..+.+++..|+ +.||.+||++.++++
T Consensus       240 ~~~~~~~~~~~~~~li~~~l-~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          240 IPEVWAEVSEKALDLVKKLL-VVDPKARFTTEEALR  274 (322)
T ss_dssp             CHHHHTTSCHHHHHHHHHHS-CSSTTTSCCHHHHHT
T ss_pred             CchhhhhcCHHHHHHHHHHc-ccCHhhCCCHHHHhh
Confidence            11122334568999999999 999999999999975

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.90  E-value=9.2e-24  Score=195.33  Aligned_cols=174  Identities=16%  Similarity=0.215  Sum_probs=117.3

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCC-CCCccceeeeeecCCC---
Q 045092           86 ATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQ-HPNLVKLYRLCTETLK---  158 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~---  158 (307)
                      ..++|...+.||+|+||.||+|.. .+++.||||++...  .......+.+|+.++.++. |+||+++++++.....   
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~   86 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV   86 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence            467899999999999999999995 47899999998643  3344567889999999996 9999999998864311   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        87 ~lv~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  166 (388)
T 3oz6_A           87 YLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVT  166 (388)
T ss_dssp             EEEEECCSEEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCC
T ss_pred             EEEecccCcCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCccccccccccccc
Confidence                                                                                            


Q ss_pred             -------------------------CCccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHH
Q 045092          159 -------------------------QPIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWL  212 (307)
Q Consensus       159 -------------------------~t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~  212 (307)
                                               +|+.|+|||.+.+ ..++.++|||||||+++||++|+.||.......   ....+
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~---~~~~i  243 (388)
T 3oz6_A          167 NNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN---QLERI  243 (388)
T ss_dssp             CCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHH
T ss_pred             ccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHH
Confidence                                     1345999999876 678999999999999999999999996433211   11111


Q ss_pred             HHHHH-----------------------hhhhhcccccC-------------CCchhhHHHHHHHhccccCCCCCCCCCC
Q 045092          213 GSYLK-----------------------RARKLNGASCS-------------KFGFKFYRRTSDGNDQCSSSVTPTNRPL  256 (307)
Q Consensus       213 ~~~~~-----------------------~~~~~~~~~~~-------------~l~~~~~~~~~~l~~~C~~~~dP~~RPs  256 (307)
                      ...+.                       ...........             .....++..+.+++..|+ +.||.+|||
T Consensus       244 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L-~~dP~~R~t  322 (388)
T 3oz6_A          244 IGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLL-QFNPNKRIS  322 (388)
T ss_dssp             HHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHC-CSSGGGSCC
T ss_pred             HHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhh-ccCcccCCC
Confidence            00000                       00000000000             000133457899999999 999999999


Q ss_pred             HHHHHHH
Q 045092          257 MSFVVSM  263 (307)
Q Consensus       257 ~~~vl~~  263 (307)
                      +.|+++.
T Consensus       323 ~~e~l~H  329 (388)
T 3oz6_A          323 ANDALKH  329 (388)
T ss_dssp             HHHHTTS
T ss_pred             HHHHhCC
Confidence            9999865

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.90  E-value=5.1e-24  Score=203.79  Aligned_cols=164  Identities=16%  Similarity=0.191  Sum_probs=122.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh-------------hcHHHHHHHHHHHhhCCCCCccceeee
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK-------------QGNREIVNEIGMISALQHPNLVKLYRL  152 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~g~  152 (307)
                      .++|...+.||+|+||.||+|... +++.||||.+.....             ...+.+.+|+.++.+++||||++++++
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~  114 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV  114 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            678999999999999999999954 688999999865321             234678999999999999999999999


Q ss_pred             eecCCCC-------------------------------------------------------------------------
Q 045092          153 CTETLKQ-------------------------------------------------------------------------  159 (307)
Q Consensus       153 ~~~~~~~-------------------------------------------------------------------------  159 (307)
                      +.+....                                                                         
T Consensus       115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg  194 (504)
T 3q5i_A          115 FEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFG  194 (504)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCT
T ss_pred             EEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECC
Confidence            8765110                                                                         


Q ss_pred             ----------------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhc
Q 045092          160 ----------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLN  223 (307)
Q Consensus       160 ----------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  223 (307)
                                      |+.|+|||.+. +.++.++||||+||++|+|++|+.||......      + +...+..+. . 
T Consensus       195 ~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~-~~~~i~~~~-~-  264 (504)
T 3q5i_A          195 LSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ------D-IIKKVEKGK-Y-  264 (504)
T ss_dssp             TCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------H-HHHHHHHCC-C-
T ss_pred             CCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH------H-HHHHHHcCC-C-
Confidence                            78899999876 56999999999999999999999999643321      1 111122111 0 


Q ss_pred             ccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          224 GASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       224 ~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                       ..+.......+..+.+++..|+ +.||.+|||+.++++
T Consensus       265 -~~~~~~~~~~s~~~~~li~~~L-~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          265 -YFDFNDWKNISDEAKELIKLML-TYDYNKRCTAEEALN  301 (504)
T ss_dssp             -CCCHHHHTTSCHHHHHHHHHHT-CSSTTTSCCHHHHHT
T ss_pred             -CCCccccCCCCHHHHHHHHHHc-CCChhHCCCHHHHhc
Confidence             0010111234558999999999 999999999999975

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.90  E-value=7.8e-24  Score=191.40  Aligned_cols=171  Identities=16%  Similarity=0.229  Sum_probs=128.5

Q ss_pred             HHHHHhcCcccC-CcccCCCCeeEEEEEEc-CCCEEEEEEccCCC--hhcHHHHHHHHHHHhhC-CCCCccceeeeeecC
Q 045092           82 QIKAATNNFASE-NEISERGFGPVYRGLLA-DGKVIEVKQLSSKS--KQGNREIVNEIGMISAL-QHPNLVKLYRLCTET  156 (307)
Q Consensus        82 el~~~t~~f~~~-~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~  156 (307)
                      ......+.|.+. +.||+|+||.||+|... +++.||||.+....  ......+.+|+.++.++ +|+||+++++++.+.
T Consensus        22 ~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~  101 (327)
T 3lm5_A           22 SMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENT  101 (327)
T ss_dssp             CHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred             HHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeC
Confidence            333445567766 88999999999999954 78999999987542  23357899999999999 579999999987654


Q ss_pred             CC------------------------------------------------------------------------------
Q 045092          157 LK------------------------------------------------------------------------------  158 (307)
Q Consensus       157 ~~------------------------------------------------------------------------------  158 (307)
                      ..                                                                              
T Consensus       102 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a  181 (327)
T 3lm5_A          102 SEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMS  181 (327)
T ss_dssp             SEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGC
T ss_pred             CeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccc
Confidence            10                                                                              


Q ss_pred             -------------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhccc
Q 045092          159 -------------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGA  225 (307)
Q Consensus       159 -------------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  225 (307)
                                   +|+.|+|||.+.++.++.++||||||+++|||++|+.||.......      .... +..   ....
T Consensus       182 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~-i~~---~~~~  251 (327)
T 3lm5_A          182 RKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE------TYLN-ISQ---VNVD  251 (327)
T ss_dssp             EEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHH-HHH---TCCC
T ss_pred             cccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH------HHHH-HHh---cccc
Confidence                         0778999999999999999999999999999999999996432211      1111 111   1111


Q ss_pred             ccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          226 SCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       226 ~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ........++..+.+++..|+ +.||.+||++.++++.
T Consensus       252 ~~~~~~~~~~~~~~~li~~~L-~~dP~~Rpt~~~ll~h  288 (327)
T 3lm5_A          252 YSEETFSSVSQLATDFIQSLL-VKNPEKRPTAEICLSH  288 (327)
T ss_dssp             CCTTTTTTSCHHHHHHHHHHS-CSSGGGSCCHHHHTTC
T ss_pred             cCchhhcccCHHHHHHHHHHc-CCChhhCcCHHHHhCC
Confidence            222223345668999999999 9999999999999753

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.90  E-value=1.5e-23  Score=184.25  Aligned_cols=162  Identities=17%  Similarity=0.200  Sum_probs=122.5

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      .++|.+.+.||+|+||.||+|... +++.||||.+....   ....+.+.+|+.++..++|+||+++++++......   
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV   89 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence            367889999999999999999965 78999999986432   22356789999999999999999999988654110   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~  169 (276)
T 2h6d_A           90 MEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT  169 (276)
T ss_dssp             EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC------
T ss_pred             EeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCCcceec
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccCCC-CchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhH
Q 045092          160 ---PIVYMAPEYAKHGYL-TDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFY  235 (307)
Q Consensus       160 ---t~~y~aPE~~~~~~~-~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  235 (307)
                         |+.|+|||.+.+..+ +.++||||||+++++|++|+.||.....      .. ....+..+.       ..++..++
T Consensus       170 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~-~~~~~~~~~-------~~~~~~~~  235 (276)
T 2h6d_A          170 SCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV------PT-LFKKIRGGV-------FYIPEYLN  235 (276)
T ss_dssp             -------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH------HH-HHHHHHHCC-------CCCCTTSC
T ss_pred             ccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH------HH-HHHHhhcCc-------ccCchhcC
Confidence               677999999987665 5899999999999999999999964221      11 111111111       12334456


Q ss_pred             HHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          236 RRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       236 ~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ..+.+++..|+ +.||.+||++.++++.
T Consensus       236 ~~l~~li~~~l-~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          236 RSVATLLMHML-QVDPLKRATIKDIREH  262 (276)
T ss_dssp             HHHHHHHHHHT-CSSGGGSCCHHHHHHS
T ss_pred             HHHHHHHHHHc-cCChhhCCCHHHHHhC
Confidence            68899999999 9999999999999874

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.89  E-value=1.3e-23  Score=207.08  Aligned_cols=173  Identities=20%  Similarity=0.265  Sum_probs=133.9

Q ss_pred             HHHHHhcCcccCCcccCCCCeeEEEEEEc----CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecC
Q 045092           82 QIKAATNNFASENEISERGFGPVYRGLLA----DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTET  156 (307)
Q Consensus        82 el~~~t~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~  156 (307)
                      +.....++|...+.||+|+||.||+|...    .+..||||.+.... ....+.|.+|+.++.+++||||++++|++.+.
T Consensus       384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~  463 (656)
T 2j0j_A          384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN  463 (656)
T ss_dssp             GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence            33344577889999999999999999863    24579999987543 33456899999999999999999999998653


Q ss_pred             CCC-----------------------------------------------------------------------------
Q 045092          157 LKQ-----------------------------------------------------------------------------  159 (307)
Q Consensus       157 ~~~-----------------------------------------------------------------------------  159 (307)
                      ...                                                                             
T Consensus       464 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~  543 (656)
T 2j0j_A          464 PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED  543 (656)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred             ceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence            110                                                                             


Q ss_pred             -----------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhccccc
Q 045092          160 -----------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC  227 (307)
Q Consensus       160 -----------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  227 (307)
                                 |+.|+|||.+.++.++.++|||||||++|||++ |+.||......      +.. ..+..      ...
T Consensus       544 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~------~~~-~~i~~------~~~  610 (656)
T 2j0j_A          544 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN------DVI-GRIEN------GER  610 (656)
T ss_dssp             ----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHH-HHHHH------TCC
T ss_pred             CcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH------HHH-HHHHc------CCC
Confidence                       468999999999999999999999999999997 99999643221      111 11111      112


Q ss_pred             CCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          228 SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       228 ~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      +.++..++..+.+++..|+ +.||.+||++.++++.|+.+.
T Consensus       611 ~~~~~~~~~~l~~li~~~l-~~dP~~RPs~~el~~~L~~il  650 (656)
T 2j0j_A          611 LPMPPNCPPTLYSLMTKCW-AYDPSRRPRFTELKAQLSTIL  650 (656)
T ss_dssp             CCCCTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCccccHHHHHHHHHHc-CCChhHCcCHHHHHHHHHHHH
Confidence            3344566778999999999 999999999999999998754

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.89  E-value=4.5e-24  Score=200.64  Aligned_cols=176  Identities=13%  Similarity=0.115  Sum_probs=131.0

Q ss_pred             ccHHHHHHHhcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh---hcHHHHHHHHHHHhhCCCCCccceeeee
Q 045092           78 FHLRQIKAATNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK---QGNREIVNEIGMISALQHPNLVKLYRLC  153 (307)
Q Consensus        78 ~~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~  153 (307)
                      +.+.++...+++|+..+.||+|+||.||+|... +++.||||+++....   .....+.+|+.++..++|+||++++++|
T Consensus        64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  143 (437)
T 4aw2_A           64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF  143 (437)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             chhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            345666777899999999999999999999965 678999999864211   1223488999999999999999999988


Q ss_pred             ecCCC---------------------------------------------------------------------------
Q 045092          154 TETLK---------------------------------------------------------------------------  158 (307)
Q Consensus       154 ~~~~~---------------------------------------------------------------------------  158 (307)
                      .+...                                                                           
T Consensus       144 ~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~  223 (437)
T 4aw2_A          144 QDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCL  223 (437)
T ss_dssp             ECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             eeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhh
Confidence            76411                                                                           


Q ss_pred             --------------CCccccchhhhc-----cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhh
Q 045092          159 --------------QPIVYMAPEYAK-----HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRA  219 (307)
Q Consensus       159 --------------~t~~y~aPE~~~-----~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~  219 (307)
                                    +|+.|+|||++.     .+.++.++|||||||++|||++|+.||.....      .+.....+...
T Consensus       224 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~------~~~~~~i~~~~  297 (437)
T 4aw2_A          224 KLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL------VETYGKIMNHK  297 (437)
T ss_dssp             ECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHTHH
T ss_pred             hcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh------hHHHHhhhhcc
Confidence                          088999999987     56789999999999999999999999964322      11111111111


Q ss_pred             hhhcccccCCCchhhHHHHHHHhccccCCCCCCC--CCCHHHHHHH
Q 045092          220 RKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTN--RPLMSFVVSM  263 (307)
Q Consensus       220 ~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~--RPs~~~vl~~  263 (307)
                         .....|......+..+.+++..|+ ..+|++  ||++.++++.
T Consensus       298 ---~~~~~p~~~~~~s~~~~dLi~~lL-~~~~~r~~r~~~~eil~H  339 (437)
T 4aw2_A          298 ---ERFQFPTQVTDVSENAKDLIRRLI-CSREHRLGQNGIEDFKKH  339 (437)
T ss_dssp             ---HHCCCCSSCCCSCHHHHHHHHTTS-SCGGGCTTTTTTHHHHTS
T ss_pred             ---ccccCCcccccCCHHHHHHHHHHh-cccccccCCCCHHHHhCC
Confidence               111122222345668899999998 888888  9999999863

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.89  E-value=2e-23  Score=190.08  Aligned_cols=172  Identities=15%  Similarity=0.193  Sum_probs=123.9

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCC----C--
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETL----K--  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~----~--  158 (307)
                      .++|...+.||+|+||.||+|... +|+.||||.+.... ......+.+|+.++.+++|+||+++++++....    .  
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            578999999999999999999964 78999999996543 334567889999999999999999998865431    0  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        90 ~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~  169 (353)
T 2b9h_A           90 YIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADN  169 (353)
T ss_dssp             EEEECCCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC------
T ss_pred             EEEEeccCccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccccccccc
Confidence                                                                                            


Q ss_pred             --------------CCccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhh----
Q 045092          159 --------------QPIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRA----  219 (307)
Q Consensus       159 --------------~t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~----  219 (307)
                                    +|+.|+|||.+.+ +.++.++|||||||+++||++|+.||........   ...+.......    
T Consensus       170 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~  246 (353)
T 2b9h_A          170 SEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ---LLLIFGIIGTPHSDN  246 (353)
T ss_dssp             ----------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCCSTT
T ss_pred             cCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH---HHHHHHHhCCCchhc
Confidence                          0456999998765 6789999999999999999999999964332110   00010000000    


Q ss_pred             --------------hhhcccccC---CCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          220 --------------RKLNGASCS---KFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       220 --------------~~~~~~~~~---~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                                    ..+......   .+...++..+.+++..|+ +.||.+||++.++++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L-~~dP~~Rpt~~ell~  305 (353)
T 2b9h_A          247 DLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRML-VFDPAKRITAKEALE  305 (353)
T ss_dssp             TTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHS-CSSGGGSCCHHHHHT
T ss_pred             cccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhc-CcCcccCCCHHHHhc
Confidence                          000000000   011234558899999999 999999999999986

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.89  E-value=4.4e-23  Score=188.25  Aligned_cols=169  Identities=17%  Similarity=0.221  Sum_probs=125.8

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      .++|...+.||+|+||.||+|.. .+|+.||||.+...  .....+.+.+|+.++.+++|+||+++++++.....     
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            46788899999999999999995 47899999998653  23335678999999999999999999998764311     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       103 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~  182 (353)
T 3coi_A          103 DFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTG  182 (353)
T ss_dssp             CCEEEEECCSEEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-------
T ss_pred             eEEEEeccccCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCCCccc
Confidence                                                                                            


Q ss_pred             --CCccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhh---------------
Q 045092          159 --QPIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRAR---------------  220 (307)
Q Consensus       159 --~t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~---------------  220 (307)
                        .|+.|+|||.+.+ ..++.++|||||||+++||++|+.||......      +.+........               
T Consensus       183 ~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~------~~~~~i~~~~~~~~~~~~~~~~~~~~  256 (353)
T 3coi_A          183 YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL------DQLTQILKVTGVPGTEFVQKLNDKAA  256 (353)
T ss_dssp             -CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH------HHHHHHHHHHCBCCHHHHTTCSCHHH
T ss_pred             cccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHHhCCCCHHHHHHHhhHHH
Confidence              0778999999876 67899999999999999999999999643321      11111111000               


Q ss_pred             -----hhccccc---CCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          221 -----KLNGASC---SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       221 -----~~~~~~~---~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                           .+.....   ..+....+..+.+++..|+ +.||.+||++.++++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L-~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          257 KSYIQSLPQTPRKDFTQLFPRASPQAADLLEKML-ELDVDKRLTAAQALT  305 (353)
T ss_dssp             HHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHS-CSCTTTSCCHHHHHT
T ss_pred             HHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHc-CCCcccCCCHHHHhc
Confidence                 0000001   1112344568999999999 999999999999986

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.89  E-value=3.5e-24  Score=195.52  Aligned_cols=163  Identities=17%  Similarity=0.194  Sum_probs=125.8

Q ss_pred             HHHhcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC
Q 045092           84 KAATNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK  158 (307)
Q Consensus        84 ~~~t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~  158 (307)
                      ....++|...+.||+|+||.||+|... +++.||||+++...   ......+..|..++..+ +||||+++++++.+...
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~   92 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN   92 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence            345688999999999999999999964 78999999986432   23456788999999887 99999999998876411


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        93 ~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~  172 (345)
T 1xjd_A           93 LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD  172 (345)
T ss_dssp             EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCC
Confidence                                                                                            


Q ss_pred             -------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCc
Q 045092          159 -------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFG  231 (307)
Q Consensus       159 -------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~  231 (307)
                             +|+.|+|||.+.+..++.++|||||||++|||++|+.||......      . +...+..+       .+.++
T Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~-~~~~i~~~-------~~~~p  238 (345)
T 1xjd_A          173 AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE------E-LFHSIRMD-------NPFYP  238 (345)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------H-HHHHHHHC-------CCCCC
T ss_pred             CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH------H-HHHHHHhC-------CCCCC
Confidence                   078899999999999999999999999999999999999643211      1 11111111       12334


Q ss_pred             hhhHHHHHHHhccccCCCCCCCCCCHH-HHH
Q 045092          232 FKFYRRTSDGNDQCSSSVTPTNRPLMS-FVV  261 (307)
Q Consensus       232 ~~~~~~~~~l~~~C~~~~dP~~RPs~~-~vl  261 (307)
                      ..++..+.+++..|+ ..||.+||++. +++
T Consensus       239 ~~~s~~~~~li~~lL-~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          239 RWLEKEAKDLLVKLF-VREPEKRLGVRGDIR  268 (345)
T ss_dssp             TTSCHHHHHHHHHHS-CSSGGGSBTTBSCGG
T ss_pred             cccCHHHHHHHHHHh-cCCHhHcCCChHHHH
Confidence            456678999999999 99999999987 554

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.89  E-value=1.3e-23  Score=185.28  Aligned_cols=160  Identities=19%  Similarity=0.242  Sum_probs=126.5

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCC--------
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETL--------  157 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~--------  157 (307)
                      .++|...+.||+|+||.||+|... +++.||||.+....    ..+.+|+.++.+++|+||+++++++....        
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   85 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK   85 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred             ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence            467899999999999999999965 78999999986543    35678999999999999999998764300        


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          158 --------------------------------------------------------------------------------  157 (307)
Q Consensus       158 --------------------------------------------------------------------------------  157 (307)
                                                                                                      
T Consensus        86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~D  165 (284)
T 2a19_B           86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGD  165 (284)
T ss_dssp             ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECC
T ss_pred             cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECc
Confidence                                                                                            


Q ss_pred             ----------------CCCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhh
Q 045092          158 ----------------KQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARK  221 (307)
Q Consensus       158 ----------------~~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~  221 (307)
                                      ..|+.|+|||.+.+..++.++||||||+++|||++|..|+...        .. ....+.    
T Consensus       166 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--------~~-~~~~~~----  232 (284)
T 2a19_B          166 FGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--------SK-FFTDLR----  232 (284)
T ss_dssp             CTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--------HH-HHHHHH----
T ss_pred             chhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--------HH-HHHHhh----
Confidence                            0077899999999999999999999999999999999887311        00 111111    


Q ss_pred             hcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          222 LNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       222 ~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                           ...++..++..+.+++..|+ +.||.+||++.++++.|.....
T Consensus       233 -----~~~~~~~~~~~~~~li~~~l-~~dp~~Rps~~e~l~~l~~~~~  274 (284)
T 2a19_B          233 -----DGIISDIFDKKEKTLLQKLL-SKKPEDRPNTSEILRTLTVWKK  274 (284)
T ss_dssp             -----TTCCCTTSCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHTC
T ss_pred             -----cccccccCCHHHHHHHHHHc-cCChhhCcCHHHHHHHHHHHhh
Confidence                 12223445668899999999 9999999999999999876543

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.89  E-value=2e-23  Score=195.30  Aligned_cols=168  Identities=19%  Similarity=0.206  Sum_probs=120.3

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC--------
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK--------  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~--------  158 (307)
                      .+|...+.||+|+||.||+|... +++.||||++....    ..+.+|+++|++++|+||+++++++.....        
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~  129 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN  129 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence            45888899999999999999964 68999999986432    223479999999999999999887743100        


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       130 lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~  209 (420)
T 1j1b_A          130 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR  209 (420)
T ss_dssp             EEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred             eehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhccc
Confidence                                                                                            


Q ss_pred             --------CCccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHH-------HHHhhh-h
Q 045092          159 --------QPIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGS-------YLKRAR-K  221 (307)
Q Consensus       159 --------~t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~-------~~~~~~-~  221 (307)
                              .|+.|+|||++.+. .++.++|||||||++|||++|+.||......  ..+...+..       .+.... .
T Consensus       210 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~--~~l~~i~~~lg~p~~~~~~~~~~~  287 (420)
T 1j1b_A          210 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV--DQLVEIIKVLGTPTREQIREMNPN  287 (420)
T ss_dssp             TCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCSCCHHHHHHHCSC
T ss_pred             CCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCCHHHHHhhChh
Confidence                    07789999998764 7999999999999999999999999643321  111111110       000000 0


Q ss_pred             hcccccCC---------CchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          222 LNGASCSK---------FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       222 ~~~~~~~~---------l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ......+.         +....+.++.+++.+|+ +.||.+||++.|+++
T Consensus       288 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L-~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          288 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLL-EYTPTARLTPLEACA  336 (420)
T ss_dssp             CCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHS-CSSGGGSCCHHHHHT
T ss_pred             hhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhc-cCChhHCCCHHHHhC
Confidence            11111111         11234568999999999 999999999999985

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.89  E-value=8.3e-24  Score=186.43  Aligned_cols=160  Identities=14%  Similarity=0.187  Sum_probs=125.7

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC--ChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK--SKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~---  159 (307)
                      .++|...+.||+|+||.||+|... +++.||||.+...  .......+.+|+..+.++ +||||+++++++.+....   
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            567999999999999999999965 7899999998753  233456789999999999 999999999988654100   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~  169 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN  169 (289)
T ss_dssp             EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------
T ss_pred             EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCC
Confidence                                                                                            


Q ss_pred             -----------------------CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHH
Q 045092          160 -----------------------PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSY  215 (307)
Q Consensus       160 -----------------------t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~  215 (307)
                                             |+.|+|||.+.+. .++.++|||||||+++||++|.+++....     .     ...
T Consensus       170 ~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-----~-----~~~  239 (289)
T 1x8b_A          170 KVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD-----Q-----WHE  239 (289)
T ss_dssp             CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH-----H-----HHH
T ss_pred             ceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh-----H-----HHH
Confidence                                   6679999998866 56689999999999999999988763211     1     111


Q ss_pred             HHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          216 LKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       216 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                            +.....+.++..++..+.+++..|+ +.||++||++.++++.
T Consensus       240 ------~~~~~~~~~~~~~~~~~~~li~~~l-~~dp~~Rps~~~ll~h  280 (289)
T 1x8b_A          240 ------IRQGRLPRIPQVLSQEFTELLKVMI-HPDPERRPSAMALVKH  280 (289)
T ss_dssp             ------HHTTCCCCCSSCCCHHHHHHHHHHT-CSSGGGSCCHHHHHTC
T ss_pred             ------HHcCCCCCCCcccCHHHHHHHHHHh-CCCcccCCCHHHHhhC
Confidence                  1222234445566778999999999 9999999999999753

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.89  E-value=5.2e-24  Score=198.71  Aligned_cols=173  Identities=13%  Similarity=0.134  Sum_probs=129.3

Q ss_pred             HHHHHHHhcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeec
Q 045092           80 LRQIKAATNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTE  155 (307)
Q Consensus        80 ~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~  155 (307)
                      +.++....++|...+.||+|+||.||+|... +++.||+|+++...   ......+.+|+.++..++||||+++++++.+
T Consensus        61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~  140 (410)
T 3v8s_A           61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  140 (410)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence            4455666789999999999999999999964 68999999986421   1223458899999999999999999998876


Q ss_pred             CCC-----------------------------------------------------------------------------
Q 045092          156 TLK-----------------------------------------------------------------------------  158 (307)
Q Consensus       156 ~~~-----------------------------------------------------------------------------  158 (307)
                      ...                                                                             
T Consensus       141 ~~~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~  220 (410)
T 3v8s_A          141 DRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK  220 (410)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             CCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeecc
Confidence            521                                                                             


Q ss_pred             ----------CCccccchhhhccCC----CCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcc
Q 045092          159 ----------QPIVYMAPEYAKHGY----LTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNG  224 (307)
Q Consensus       159 ----------~t~~y~aPE~~~~~~----~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  224 (307)
                                +|+.|+|||++.+..    ++.++|||||||++|||++|+.||.....      ............   .
T Consensus       221 ~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~------~~~~~~i~~~~~---~  291 (410)
T 3v8s_A          221 EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL------VGTYSKIMNHKN---S  291 (410)
T ss_dssp             TSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHTHHH---H
T ss_pred             CCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh------hhHHHHHHhccc---c
Confidence                      188999999998654    78999999999999999999999964321      111111111110   0


Q ss_pred             cccCCCchhhHHHHHHHhccccCCCCCCC--CCCHHHHHHH
Q 045092          225 ASCSKFGFKFYRRTSDGNDQCSSSVTPTN--RPLMSFVVSM  263 (307)
Q Consensus       225 ~~~~~l~~~~~~~~~~l~~~C~~~~dP~~--RPs~~~vl~~  263 (307)
                      ...| ....++..+.+++..|+ ..+|.+  ||++.+|+++
T Consensus       292 ~~~p-~~~~~s~~~~~li~~lL-~~~~~rlgR~~~~ei~~H  330 (410)
T 3v8s_A          292 LTFP-DDNDISKEAKNLICAFL-TDREVRLGRNGVEEIKRH  330 (410)
T ss_dssp             CCCC-TTCCCCHHHHHHHHHHS-SCGGGCTTSSCHHHHHTS
T ss_pred             ccCC-CcccccHHHHHHHHHHc-cChhhhCCCCCHHHHhcC
Confidence            1111 11235568899999999 888988  9999999864

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.89  E-value=2.4e-24  Score=196.86  Aligned_cols=123  Identities=21%  Similarity=0.186  Sum_probs=102.3

Q ss_pred             cccHHHHHHHhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCC-----CCCcccee
Q 045092           77 SFHLRQIKAATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQ-----HPNLVKLY  150 (307)
Q Consensus        77 ~~~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~  150 (307)
                      .|++.+-....++|...+.||+|+||.||+|.. .+++.||||+++.. ....+.+..|+.++..+.     |+||++++
T Consensus        24 ~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~  102 (360)
T 3llt_A           24 HFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYH  102 (360)
T ss_dssp             SCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEE
T ss_pred             eeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeeccc
Confidence            355555555678999999999999999999995 47899999998643 344567888999999986     99999999


Q ss_pred             eeeecCC--------------------------------------------------------------C----------
Q 045092          151 RLCTETL--------------------------------------------------------------K----------  158 (307)
Q Consensus       151 g~~~~~~--------------------------------------------------------------~----------  158 (307)
                      +++....                                                              .          
T Consensus       103 ~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~  182 (360)
T 3llt_A          103 GKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITV  182 (360)
T ss_dssp             EEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEE
T ss_pred             ceeeECCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccch
Confidence            9775431                                                              0          


Q ss_pred             --------------------------------------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCC
Q 045092          159 --------------------------------------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICR  200 (307)
Q Consensus       159 --------------------------------------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~  200 (307)
                                                            +|+.|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus       183 ~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  262 (360)
T 3llt_A          183 RRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH  262 (360)
T ss_dssp             ECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             hcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence                                                  067899999999999999999999999999999999999643

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.89  E-value=6e-23  Score=193.94  Aligned_cols=68  Identities=18%  Similarity=0.374  Sum_probs=50.0

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeee
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCT  154 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~  154 (307)
                      .++|...+.||+|+||.||+|.. .+++.||||++...  .....+.+.+|+.+|.+++|+||+++++++.
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~  122 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVI  122 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEe
Confidence            46899999999999999999995 47899999998653  3344568999999999999999999999874

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.89  E-value=1.2e-23  Score=191.99  Aligned_cols=179  Identities=17%  Similarity=0.166  Sum_probs=117.3

Q ss_pred             cHHHHHHHhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCC
Q 045092           79 HLRQIKAATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETL  157 (307)
Q Consensus        79 ~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~  157 (307)
                      ...+.....++|...+.||+|+||.||+|.. .+++.||||++.... .....+.+|++.+..++|+||+++++++....
T Consensus        14 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~   92 (360)
T 3e3p_A           14 ADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLG   92 (360)
T ss_dssp             SSHHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEEC
T ss_pred             hhhhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccc
Confidence            3345567789999999999999999999996 478999999885532 33346778888899999999999998874311


Q ss_pred             C-------------------------------------------------------------------------------
Q 045092          158 K-------------------------------------------------------------------------------  158 (307)
Q Consensus       158 ~-------------------------------------------------------------------------------  158 (307)
                      .                                                                               
T Consensus        93 ~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~k  172 (360)
T 3e3p_A           93 ERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLK  172 (360)
T ss_dssp             SSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEE
T ss_pred             cccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEE
Confidence            0                                                                               


Q ss_pred             --------------------CCccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHH-
Q 045092          159 --------------------QPIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYL-  216 (307)
Q Consensus       159 --------------------~t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~-  216 (307)
                                          .|+.|+|||.+.+. .++.++|||||||++|||++|+.||.......  .+.. +.... 
T Consensus       173 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~--~~~~-~~~~~~  249 (360)
T 3e3p_A          173 LCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG--QLHE-IVRVLG  249 (360)
T ss_dssp             ECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHH-HHHHHC
T ss_pred             EeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHH--HHHH-HHHHcC
Confidence                                07789999998654 48999999999999999999999996433211  1111 11100 


Q ss_pred             -------Hhhh----hhccc---------ccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          217 -------KRAR----KLNGA---------SCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       217 -------~~~~----~~~~~---------~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                             ....    .....         ..+......+..+.+++..|+ +.||.+||++.|+++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L-~~dP~~Rpt~~e~l~  314 (360)
T 3e3p_A          250 CPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALL-QYLPEERMKPYEALC  314 (360)
T ss_dssp             CCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHT-CSSGGGSCCHHHHTT
T ss_pred             CCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHh-ccCccccCCHHHHhc
Confidence                   0000    00000         001111124558999999999 999999999999986

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.89  E-value=4.9e-24  Score=199.01  Aligned_cols=175  Identities=13%  Similarity=0.130  Sum_probs=129.6

Q ss_pred             ccHHHHHHHhcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeee
Q 045092           78 FHLRQIKAATNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLC  153 (307)
Q Consensus        78 ~~~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~  153 (307)
                      +.++++....++|+..+.||+|+||.||++... +++.||||+++...   ....+.+.+|+.++..++|+||+++++++
T Consensus        51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  130 (412)
T 2vd5_A           51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF  130 (412)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            456666677899999999999999999999964 78999999986431   12234588999999999999999999988


Q ss_pred             ecCCC---------------------------------------------------------------------------
Q 045092          154 TETLK---------------------------------------------------------------------------  158 (307)
Q Consensus       154 ~~~~~---------------------------------------------------------------------------  158 (307)
                      .+...                                                                           
T Consensus       131 ~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~  210 (412)
T 2vd5_A          131 QDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCL  210 (412)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             eeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhhe
Confidence            76411                                                                           


Q ss_pred             --------------CCccccchhhhc-------cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHH
Q 045092          159 --------------QPIVYMAPEYAK-------HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLK  217 (307)
Q Consensus       159 --------------~t~~y~aPE~~~-------~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~  217 (307)
                                    +|+.|+|||++.       .+.++.++|||||||++|||++|+.||......      +.......
T Consensus       211 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~------~~~~~i~~  284 (412)
T 2vd5_A          211 KLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA------ETYGKIVH  284 (412)
T ss_dssp             ECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHT
T ss_pred             eccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH------HHHHHHHh
Confidence                          088899999987       357899999999999999999999999643221      11111111


Q ss_pred             hhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCC---CCHHHHHHH
Q 045092          218 RARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNR---PLMSFVVSM  263 (307)
Q Consensus       218 ~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~R---Ps~~~vl~~  263 (307)
                      ..   .....|.+...++.++.+++.+|+ . +|.+|   |++.++++.
T Consensus       285 ~~---~~~~~p~~~~~~s~~~~dli~~lL-~-~p~~Rlgr~~~~ei~~H  328 (412)
T 2vd5_A          285 YK---EHLSLPLVDEGVPEEARDFIQRLL-C-PPETRLGRGGAGDFRTH  328 (412)
T ss_dssp             HH---HHCCCC----CCCHHHHHHHHTTS-S-CGGGCTTTTTHHHHHTS
T ss_pred             cc---cCcCCCccccCCCHHHHHHHHHHc-C-ChhhcCCCCCHHHHhcC
Confidence            10   111122233456678999999999 8 89988   689998753

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.89  E-value=5.7e-24  Score=189.21  Aligned_cols=171  Identities=19%  Similarity=0.269  Sum_probs=111.0

Q ss_pred             HHhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           85 AATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        85 ~~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      ...++|...+.||+|+||.||+|.. .+++.||||.+.... ....+.+.+|+.++.+++||||+++++++......   
T Consensus        12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   91 (303)
T 2vwi_A           12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV   91 (303)
T ss_dssp             -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred             cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence            3467899999999999999999994 478999999986542 33456789999999999999999999987643110   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  171 (303)
T 2vwi_A           92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFL  171 (303)
T ss_dssp             EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHC
T ss_pred             ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchhee
Confidence                                                                                            


Q ss_pred             -----------------Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhh-
Q 045092          160 -----------------PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRAR-  220 (307)
Q Consensus       160 -----------------t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~-  220 (307)
                                       |+.|+|||.+.+ ..++.++||||||+++|||++|+.||........  +    ........ 
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~----~~~~~~~~~  245 (303)
T 2vwi_A          172 ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV--L----MLTLQNDPP  245 (303)
T ss_dssp             C---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH--H----HHHHTSSCC
T ss_pred             ccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH--H----HHHhccCCC
Confidence                             567999999875 5689999999999999999999999965432221  1    11111100 


Q ss_pred             hh-cccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          221 KL-NGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       221 ~~-~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .. ....++.....++..+.+++..|+ +.||.+||++.++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~li~~~l-~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          246 SLETGVQDKEMLKKYGKSFRKMISLCL-QKDPEKRPTAAELLR  287 (303)
T ss_dssp             CTTC-----CCCCCCCHHHHHHHHHHC-CSSGGGSCCHHHHHT
T ss_pred             ccccccccchhhhhhhHHHHHHHHHHc-cCChhhCcCHHHHhh
Confidence            00 011122223445668999999999 999999999999976

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.89  E-value=3.8e-24  Score=192.06  Aligned_cols=175  Identities=15%  Similarity=0.223  Sum_probs=129.8

Q ss_pred             HHHHHHHhcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCC
Q 045092           80 LRQIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETL  157 (307)
Q Consensus        80 ~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~  157 (307)
                      ..++....++|...+.||+|+||.||+|....  .||+|.++...  ....+.+.+|+.++.+++|+||+++++++.+..
T Consensus        25 ~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~  102 (319)
T 2y4i_B           25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP  102 (319)
T ss_dssp             GGGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS
T ss_pred             cccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence            33444446789999999999999999999753  49999986432  223456888999999999999999999887642


Q ss_pred             CC------------------------------------------------------------------------------
Q 045092          158 KQ------------------------------------------------------------------------------  159 (307)
Q Consensus       158 ~~------------------------------------------------------------------------------  159 (307)
                      ..                                                                              
T Consensus       103 ~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~~~~~~l~Dfg~~~~~~~~  182 (319)
T 2y4i_B          103 HLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVVITDFGLFSISGVL  182 (319)
T ss_dssp             CEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC--CCEECCCSCCC-----
T ss_pred             ceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEeCCCEEEeecCCccccccc
Confidence            10                                                                              


Q ss_pred             --------------Cccccchhhhcc---------CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHH
Q 045092          160 --------------PIVYMAPEYAKH---------GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYL  216 (307)
Q Consensus       160 --------------t~~y~aPE~~~~---------~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~  216 (307)
                                    |+.|+|||.+..         ..++.++||||||+++|||++|+.||......      . ....+
T Consensus       183 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~-~~~~~  255 (319)
T 2y4i_B          183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE------A-IIWQM  255 (319)
T ss_dssp             -----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH------H-HHHHH
T ss_pred             cccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------H-HHHHh
Confidence                          567999999874         45789999999999999999999999643211      1 11111


Q ss_pred             HhhhhhcccccCCC-chhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccccc
Q 045092          217 KRARKLNGASCSKF-GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAEV  270 (307)
Q Consensus       217 ~~~~~~~~~~~~~l-~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~v  270 (307)
                      ..      ...+.+ ...++..+.+++..|+ ..||.+||++.++++.|+.....
T Consensus       256 ~~------~~~~~~~~~~~~~~l~~li~~~l-~~~p~~Rpt~~~l~~~l~~l~~~  303 (319)
T 2y4i_B          256 GT------GMKPNLSQIGMGKEISDILLFCW-AFEQEERPTFTKLMDMLEKLPKR  303 (319)
T ss_dssp             HT------TCCCCCCCSSCCTTHHHHHHHHH-CSSTTTSCCHHHHHHHHTTC---
T ss_pred             cc------CCCCCCCcCCCCHHHHHHHHHHh-cCChhhCcCHHHHHHHHHHHHHh
Confidence            11      112222 2245568899999999 99999999999999999987543

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.89  E-value=3.8e-23  Score=190.94  Aligned_cols=169  Identities=18%  Similarity=0.152  Sum_probs=120.0

Q ss_pred             HHHHhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC---
Q 045092           83 IKAATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK---  158 (307)
Q Consensus        83 l~~~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~---  158 (307)
                      +....++|...+.||+|+||.||+|.. .+|+.||||++.....    ...+|+++++.++|+||+++++++.....   
T Consensus         2 l~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~   77 (383)
T 3eb0_A            2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP   77 (383)
T ss_dssp             ----CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred             CccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence            345577899999999999999999995 5789999999864422    23479999999999999999998732100   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L  157 (383)
T 3eb0_A           78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI  157 (383)
T ss_dssp             --------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence                                                                                            


Q ss_pred             ---------------------------------------------CCccccchhhhccC-CCCchhHHHHHHHHHHHHHh
Q 045092          159 ---------------------------------------------QPIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIES  192 (307)
Q Consensus       159 ---------------------------------------------~t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~ellt  192 (307)
                                                                   .|+.|+|||.+.+. .++.++||||+||+++||++
T Consensus       158 H~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~  237 (383)
T 3eb0_A          158 HSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELIL  237 (383)
T ss_dssp             HTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred             HHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHh
Confidence                                                         07789999998764 48999999999999999999


Q ss_pred             CCCCCcCCCccCcccHHHHHHHHHHh------------hhhhcccccC---------CCchhhHHHHHHHhccccCCCCC
Q 045092          193 GRSNVICRTKEDKFYLLDWLGSYLKR------------ARKLNGASCS---------KFGFKFYRRTSDGNDQCSSSVTP  251 (307)
Q Consensus       193 g~~p~~~~~~~~~~~l~~~~~~~~~~------------~~~~~~~~~~---------~l~~~~~~~~~~l~~~C~~~~dP  251 (307)
                      |+.||......+      .+...+..            ........-+         .++...+..+.+++..|+ +.||
T Consensus       238 g~~pf~~~~~~~------~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L-~~dP  310 (383)
T 3eb0_A          238 GKPLFSGETSID------QLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQIL-RYEP  310 (383)
T ss_dssp             SSCSSCCSSHHH------HHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHC-CSSG
T ss_pred             CCCCCCCCChHH------HHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHc-cCCh
Confidence            999996433211      11111110            0000000011         122334557999999999 9999


Q ss_pred             CCCCCHHHHHH
Q 045092          252 TNRPLMSFVVS  262 (307)
Q Consensus       252 ~~RPs~~~vl~  262 (307)
                      .+|||+.|+++
T Consensus       311 ~~R~t~~e~l~  321 (383)
T 3eb0_A          311 DLRINPYEAMA  321 (383)
T ss_dssp             GGSCCHHHHHT
T ss_pred             hhCCCHHHHhc
Confidence            99999999985

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.89  E-value=4.6e-23  Score=191.72  Aligned_cols=173  Identities=17%  Similarity=0.233  Sum_probs=113.7

Q ss_pred             cCccc-CCcccCCCCeeEEEEEEc---CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           88 NNFAS-ENEISERGFGPVYRGLLA---DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        88 ~~f~~-~~~lG~G~~g~Vy~~~~~---~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      +.|.. +++||+|+||.||+|...   +++.||||++....  ....+.+|+.+|.+++|+||+++++++......    
T Consensus        20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l   97 (405)
T 3rgf_A           20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWL   97 (405)
T ss_dssp             HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred             hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence            34555 568999999999999954   57889999996542  235788999999999999999999988431000    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        98 v~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg  177 (405)
T 3rgf_A           98 LFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG  177 (405)
T ss_dssp             EEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTT
T ss_pred             EEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECC
Confidence                                                                                            


Q ss_pred             --------------------Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccC---cccHHHHHHHH
Q 045092          160 --------------------PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKED---KFYLLDWLGSY  215 (307)
Q Consensus       160 --------------------t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~---~~~l~~~~~~~  215 (307)
                                          |+.|+|||.+.+ ..++.++|||||||++|||++|+.||.......   .....+.+...
T Consensus       178 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i  257 (405)
T 3rgf_A          178 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI  257 (405)
T ss_dssp             CCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHH
T ss_pred             CceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHH
Confidence                                777999999887 458999999999999999999999996433210   00001111111


Q ss_pred             HHhhh-h----hcc-------------cccC-----C-------CchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          216 LKRAR-K----LNG-------------ASCS-----K-------FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       216 ~~~~~-~----~~~-------------~~~~-----~-------l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      +..-. .    ...             ....     .       .....+..+.+++..|+ +.||.+|||+.|+++.
T Consensus       258 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L-~~dP~~R~ta~e~L~h  334 (405)
T 3rgf_A          258 FNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLL-TMDPIKRITSEQAMQD  334 (405)
T ss_dssp             HHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHS-CSSGGGSCCHHHHHTS
T ss_pred             HHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHc-cCCcccCCCHHHHhcC
Confidence            11000 0    000             0000     0       00011346789999999 9999999999999873

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.89  E-value=1.1e-22  Score=183.60  Aligned_cols=175  Identities=17%  Similarity=0.222  Sum_probs=126.1

Q ss_pred             HHHhcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhC--CCCCccceeeeeecCCC---
Q 045092           84 KAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISAL--QHPNLVKLYRLCTETLK---  158 (307)
Q Consensus        84 ~~~t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~g~~~~~~~---  158 (307)
                      ....++|...+.||+|+||.||+|... ++.||||++...   ....+.+|.+++..+  +|+||+++++++.....   
T Consensus        33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~  108 (337)
T 3mdy_A           33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT  108 (337)
T ss_dssp             TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred             cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence            334578999999999999999999974 889999998543   234556666666655  89999999988765310   


Q ss_pred             -----------------------------------------------------C--------------------------
Q 045092          159 -----------------------------------------------------Q--------------------------  159 (307)
Q Consensus       159 -----------------------------------------------------~--------------------------  159 (307)
                                                                           +                          
T Consensus       109 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~  188 (337)
T 3mdy_A          109 QLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL  188 (337)
T ss_dssp             EEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             ceEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCC
Confidence                                                                 0                          


Q ss_pred             --------------------CccccchhhhccCCCCch------hHHHHHHHHHHHHHhC----------CCCCcCCCcc
Q 045092          160 --------------------PIVYMAPEYAKHGYLTDK------AEVCSFGIVTLEIESG----------RSNVICRTKE  203 (307)
Q Consensus       160 --------------------t~~y~aPE~~~~~~~~~~------sDV~s~Gvvl~elltg----------~~p~~~~~~~  203 (307)
                                          |+.|+|||.+.+...+.+      +|||||||++|||++|          +.||......
T Consensus       189 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~  268 (337)
T 3mdy_A          189 AVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPS  268 (337)
T ss_dssp             CEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred             ceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCC
Confidence                                678999999987766654      9999999999999999          6666433222


Q ss_pred             CcccHHHHHHHHHHhhhhhcccccCCCc-----hhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccccc
Q 045092          204 DKFYLLDWLGSYLKRARKLNGASCSKFG-----FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAEV  270 (307)
Q Consensus       204 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~v  270 (307)
                      .. .... .....     ......+.++     ..++..+.+++..|+ +.||.+||++.+|++.|+.....
T Consensus       269 ~~-~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l-~~dP~~Rps~~ell~~L~~l~~~  332 (337)
T 3mdy_A          269 DP-SYED-MREIV-----CIKKLRPSFPNRWSSDECLRQMGKLMTECW-AHNPASRLTALRVKKTLAKMSES  332 (337)
T ss_dssp             SC-CHHH-HHHHH-----TTSCCCCCCCGGGGGSHHHHHHHHHHHHHS-CSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             CC-chhh-hHHHH-----hhhccCccccccchhhHHHHHHHHHHHHhh-hhChhhCCCHHHHHHHHHHHHhh
Confidence            21 1111 11111     1122223332     245668999999999 99999999999999999876543

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.89  E-value=9.2e-23  Score=184.72  Aligned_cols=174  Identities=18%  Similarity=0.230  Sum_probs=129.4

Q ss_pred             HHHhcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhh--CCCCCccceeeeeecCCC---
Q 045092           84 KAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISA--LQHPNLVKLYRLCTETLK---  158 (307)
Q Consensus        84 ~~~t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~g~~~~~~~---  158 (307)
                      ....++|...+.||+|+||.||+|.. +++.||||.+...   ....+.+|++++..  ++|+||+++++++.....   
T Consensus        38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~  113 (342)
T 1b6c_B           38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT  113 (342)
T ss_dssp             HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred             ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence            34467899999999999999999997 5889999998543   34678889999887  799999999998765421   


Q ss_pred             C-------------------------------------------------------------------------------
Q 045092          159 Q-------------------------------------------------------------------------------  159 (307)
Q Consensus       159 ~-------------------------------------------------------------------------------  159 (307)
                      .                                                                               
T Consensus       114 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~  193 (342)
T 1b6c_B          114 QLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL  193 (342)
T ss_dssp             CEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred             eeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCC
Confidence            0                                                                               


Q ss_pred             --------------------CccccchhhhccCC------CCchhHHHHHHHHHHHHHhC----------CCCCcCCCcc
Q 045092          160 --------------------PIVYMAPEYAKHGY------LTDKAEVCSFGIVTLEIESG----------RSNVICRTKE  203 (307)
Q Consensus       160 --------------------t~~y~aPE~~~~~~------~~~~sDV~s~Gvvl~elltg----------~~p~~~~~~~  203 (307)
                                          |+.|+|||.+.+..      ++.++|||||||++|||++|          +.||......
T Consensus       194 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~  273 (342)
T 1b6c_B          194 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS  273 (342)
T ss_dssp             CEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred             ceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcC
Confidence                                67899999988653      33689999999999999999          6777543322


Q ss_pred             CcccHHHHHHHHHHhhhhhcccccCCCch-----hhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          204 DKFYLLDWLGSYLKRARKLNGASCSKFGF-----KFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       204 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                      .. ....+ ...+     ......+.++.     .....+.+++..|+ +.||++||++.+|++.|+.+..
T Consensus       274 ~~-~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl-~~dp~~Rps~~~i~~~L~~i~~  336 (342)
T 1b6c_B          274 DP-SVEEM-RKVV-----CEQKLRPNIPNRWQSCEALRVMAKIMRECW-YANGAARLTALRIKKTLSQLSQ  336 (342)
T ss_dssp             SC-CHHHH-HHHH-----TTSCCCCCCCGGGGTSHHHHHHHHHHHHHC-CSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cc-cHHHH-HHHH-----HHHHhCCCCcccccchhHHHHHHHHHHHHh-ccChhhCCCHHHHHHHHHHHHH
Confidence            11 11111 1111     12223333332     34458999999999 9999999999999999987643

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.89  E-value=4.8e-23  Score=189.26  Aligned_cols=171  Identities=14%  Similarity=0.139  Sum_probs=126.0

Q ss_pred             HHHHHHhcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh--------hcHHHHHHHHHHHhhC-CCCCcccee
Q 045092           81 RQIKAATNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK--------QGNREIVNEIGMISAL-QHPNLVKLY  150 (307)
Q Consensus        81 ~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l-~h~niv~l~  150 (307)
                      .......++|...+.||+|+||.||+|... +|+.||||++.....        ...+.+.+|+.++.++ +|+||++++
T Consensus        87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~  166 (365)
T 2y7j_A           87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI  166 (365)
T ss_dssp             HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred             hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence            344555678999999999999999999964 799999999864421        1135688999999999 899999999


Q ss_pred             eeeecCCCC-----------------------------------------------------------------------
Q 045092          151 RLCTETLKQ-----------------------------------------------------------------------  159 (307)
Q Consensus       151 g~~~~~~~~-----------------------------------------------------------------------  159 (307)
                      +++......                                                                       
T Consensus       167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~  246 (365)
T 2y7j_A          167 DSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGF  246 (365)
T ss_dssp             EEEEBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             EEEeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCc
Confidence            988654110                                                                       


Q ss_pred             ---------------Cccccchhhhcc------CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHh
Q 045092          160 ---------------PIVYMAPEYAKH------GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKR  218 (307)
Q Consensus       160 ---------------t~~y~aPE~~~~------~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~  218 (307)
                                     |+.|+|||++.+      ..++.++|||||||++|||++|+.||.....      .. ....+..
T Consensus       247 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~------~~-~~~~i~~  319 (365)
T 2y7j_A          247 SCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ------IL-MLRMIME  319 (365)
T ss_dssp             CEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HH-HHHHHHH
T ss_pred             ccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH------HH-HHHHHHh
Confidence                           788999998863      3588899999999999999999999964321      11 1111111


Q ss_pred             hhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          219 ARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       219 ~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      +.  .....+ .....+..+.+++..|+ +.||.+||++.++++
T Consensus       320 ~~--~~~~~~-~~~~~~~~~~~li~~~L-~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          320 GQ--YQFSSP-EWDDRSSTVKDLISRLL-QVDPEARLTAEQALQ  359 (365)
T ss_dssp             TC--CCCCHH-HHSSSCHHHHHHHHHHS-CSSTTTSCCHHHHHH
T ss_pred             CC--CCCCCc-ccccCCHHHHHHHHHHc-CCChhHCcCHHHHhc
Confidence            11  000000 01233457899999999 999999999999986

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.89  E-value=3.6e-23  Score=183.90  Aligned_cols=165  Identities=15%  Similarity=0.174  Sum_probs=124.4

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---------hhcHHHHHHHHHHHhhCC-CCCccceeeeeec
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---------KQGNREIVNEIGMISALQ-HPNLVKLYRLCTE  155 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~  155 (307)
                      .++|...+.||+|+||.||+|... +++.||||.+....         ....+.+.+|+.++.++. ||||+++++++..
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   95 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence            578999999999999999999964 78899999986442         112356889999999995 9999999998865


Q ss_pred             CCCC----------------------------------------------------------------------------
Q 045092          156 TLKQ----------------------------------------------------------------------------  159 (307)
Q Consensus       156 ~~~~----------------------------------------------------------------------------  159 (307)
                      ....                                                                            
T Consensus        96 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~  175 (298)
T 1phk_A           96 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD  175 (298)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcC
Confidence            4110                                                                            


Q ss_pred             ----------Cccccchhhhc------cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhc
Q 045092          160 ----------PIVYMAPEYAK------HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLN  223 (307)
Q Consensus       160 ----------t~~y~aPE~~~------~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  223 (307)
                                |+.|+|||.+.      ...++.++||||||++++||++|+.||.....      .. ....+..+.  .
T Consensus       176 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~-~~~~~~~~~--~  246 (298)
T 1phk_A          176 PGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ------ML-MLRMIMSGN--Y  246 (298)
T ss_dssp             TTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HH-HHHHHHHTC--C
T ss_pred             CCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH------HH-HHHHHhcCC--c
Confidence                      77899999885      45688999999999999999999999954321      11 111111111  1


Q ss_pred             ccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          224 GASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       224 ~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                       .........++..+.+++..|+ +.||.+||++.++++
T Consensus       247 -~~~~~~~~~~~~~l~~li~~~l-~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          247 -QFGSPEWDDYSDTVKDLVSRFL-VVQPQKRYTAEEALA  283 (298)
T ss_dssp             -CCCTTTGGGSCHHHHHHHHHHC-CSSGGGSCCHHHHTT
T ss_pred             -ccCcccccccCHHHHHHHHHHc-cCCcccCCCHHHHHh
Confidence             1111112345668999999999 999999999999975

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.89  E-value=1.7e-23  Score=190.99  Aligned_cols=171  Identities=9%  Similarity=0.019  Sum_probs=123.9

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc---------CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccc----------
Q 045092           88 NNFASENEISERGFGPVYRGLLA---------DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVK----------  148 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~---------~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~----------  148 (307)
                      ++|...+.||+|+||.||+|...         +++.||||.+...     +.+.+|+.++.+++|+||++          
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  116 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL  116 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence            67899999999999999999964         3789999998643     36889999999999999998          


Q ss_pred             -----eeeeeecCC------------------------------------------------------------------
Q 045092          149 -----LYRLCTETL------------------------------------------------------------------  157 (307)
Q Consensus       149 -----l~g~~~~~~------------------------------------------------------------------  157 (307)
                           +++++....                                                                  
T Consensus       117 ~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~  196 (352)
T 2jii_A          117 LAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPED  196 (352)
T ss_dssp             CSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTE
T ss_pred             cCccchhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCC
Confidence                 344443310                                                                  


Q ss_pred             --------------------------------CCCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCc
Q 045092          158 --------------------------------KQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDK  205 (307)
Q Consensus       158 --------------------------------~~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~  205 (307)
                                                      .+|+.|+|||.+.+..++.++|||||||++|||++|+.||....... 
T Consensus       197 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-  275 (352)
T 2jii_A          197 QSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNT-  275 (352)
T ss_dssp             EEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH-
T ss_pred             CceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCH-
Confidence                                            01668999999999899999999999999999999999996443211 


Q ss_pred             ccHHHHHHHHHHhhhhhcccccCCC-chhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          206 FYLLDWLGSYLKRARKLNGASCSKF-GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       206 ~~l~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      ..+...... +...  ......... ...++..+.+++..|+ +.||.+||++.++++.|+...
T Consensus       276 ~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~l~~li~~~l-~~dp~~Rps~~~l~~~L~~~~  335 (352)
T 2jii_A          276 EDIMKQKQK-FVDK--PGPFVGPCGHWIRPSETLQKYLKVVM-ALTYEEKPPYAMLRNNLEALL  335 (352)
T ss_dssp             HHHHHHHHH-HHHS--CCCEECTTSCEECCCHHHHHHHHHHH-TCCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHh-ccCC--hhhhhhhccccCCCcHHHHHHHHHHH-hCChhhCCCHHHHHHHHHHHH
Confidence            111111111 1110  111111111 1234668999999999 999999999999999998754

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.89  E-value=2.6e-23  Score=184.15  Aligned_cols=164  Identities=17%  Similarity=0.254  Sum_probs=125.1

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      .++|...+.||+|+||.||+|... +++.||||++...  .....+.+.+|+.++.+++|+||+++++++.+....    
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  100 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence            467999999999999999999964 7899999998643  233467899999999999999999999988654110    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       101 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~  180 (287)
T 2wei_A          101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM  180 (287)
T ss_dssp             CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSC
T ss_pred             EccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCcc
Confidence                                                                                            


Q ss_pred             -----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          160 -----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       160 -----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                           |+.|+|||.+.+ .++.++||||||+++++|++|+.||.....      .+ +...+..+. .  ..+......+
T Consensus       181 ~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~-~~~~~~~~~-~--~~~~~~~~~~  249 (287)
T 2wei_A          181 KDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE------YD-ILKRVETGK-Y--AFDLPQWRTI  249 (287)
T ss_dssp             SCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HH-HHHHHHHCC-C--CCCSGGGTTS
T ss_pred             ccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH------HH-HHHHHHcCC-C--CCCchhhhhc
Confidence                 556999998764 589999999999999999999999964321      11 111122111 1  0111111345


Q ss_pred             HHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      +..+.+++..|+ +.||.+||++.++++
T Consensus       250 ~~~~~~li~~~l-~~dp~~Rps~~ell~  276 (287)
T 2wei_A          250 SDDAKDLIRKML-TFHPSLRITATQCLE  276 (287)
T ss_dssp             CHHHHHHHHHHT-CSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHc-ccChhhCcCHHHHhc
Confidence            568999999999 999999999999986

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.89  E-value=7.9e-23  Score=187.34  Aligned_cols=174  Identities=14%  Similarity=0.090  Sum_probs=123.7

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCC-----------CCCccceeeeee
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQ-----------HPNLVKLYRLCT  154 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~g~~~  154 (307)
                      .++|...+.||+|+||.||+|.. .+++.||||++... ....+.+.+|+.++.+++           |+||+++++++.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~   96 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   96 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence            35789999999999999999995 47899999998643 334567889999999886           889999998875


Q ss_pred             cCCC----------------------------------------------------------------------------
Q 045092          155 ETLK----------------------------------------------------------------------------  158 (307)
Q Consensus       155 ~~~~----------------------------------------------------------------------------  158 (307)
                      ....                                                                            
T Consensus        97 ~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~  176 (373)
T 1q8y_A           97 HKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQ  176 (373)
T ss_dssp             EEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEE
T ss_pred             ccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcce
Confidence            4210                                                                            


Q ss_pred             --------------------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHh
Q 045092          159 --------------------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKR  218 (307)
Q Consensus       159 --------------------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~  218 (307)
                                          .|+.|+|||.+.+..++.++|||||||++|||++|+.||..........-.+.+......
T Consensus       177 ~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  256 (373)
T 1q8y_A          177 IKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL  256 (373)
T ss_dssp             EEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHH
T ss_pred             EEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHh
Confidence                                078899999999999999999999999999999999999744322111111111111110


Q ss_pred             -----------hhhh----------cc-------------cccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          219 -----------ARKL----------NG-------------ASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       219 -----------~~~~----------~~-------------~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                                 +...          ..             .....++...+..+.+++..|+ +.||.+||++.++++
T Consensus       257 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L-~~dP~~Rpt~~ell~  333 (373)
T 1q8y_A          257 LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPML-QLDPRKRADAGGLVN  333 (373)
T ss_dssp             HCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGG-CSSTTTCBCHHHHHT
T ss_pred             cCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHh-ccCccccCCHHHHhh
Confidence                       0000          00             0011223455668899999999 999999999999986

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.88  E-value=3.4e-23  Score=186.83  Aligned_cols=163  Identities=18%  Similarity=0.275  Sum_probs=108.4

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC-hhcHHHHHHHHH-HHhhCCCCCccceeeeeecCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS-KQGNREIVNEIG-MISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      .++|...+.||+|+||.||+|... +++.||||++.... ......+..|+. +++.++|+||+++++++.....     
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~  100 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM  100 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence            467888999999999999999964 78999999987542 333456666766 6777899999999998765310     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       101 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~  180 (327)
T 3aln_A          101 ELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI  180 (327)
T ss_dssp             CCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-----
T ss_pred             eecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceeccccc
Confidence                                                                                            


Q ss_pred             ------CCccccchhhh----ccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccC
Q 045092          159 ------QPIVYMAPEYA----KHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCS  228 (307)
Q Consensus       159 ------~t~~y~aPE~~----~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  228 (307)
                            +|+.|+|||.+    .++.++.++||||||+++|||++|+.||.......     +.+.      . +.....+
T Consensus       181 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~~------~-~~~~~~~  248 (327)
T 3aln_A          181 AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-----DQLT------Q-VVKGDPP  248 (327)
T ss_dssp             -------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------C------C-CCCSCCC
T ss_pred             ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-----HHHH------H-HhcCCCC
Confidence                  06779999998    45678999999999999999999999996422110     0000      0 1111111


Q ss_pred             CC----chhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          229 KF----GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       229 ~l----~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .+    ...++..+.+++..|+ +.||.+||++.++++
T Consensus       249 ~~~~~~~~~~~~~l~~li~~~l-~~dp~~Rps~~ell~  285 (327)
T 3aln_A          249 QLSNSEEREFSPSFINFVNLCL-TKDESKRPKYKELLK  285 (327)
T ss_dssp             CCCCCSSCCCCHHHHHHHHHHT-CSSGGGSCCHHHHTT
T ss_pred             CCCCcccccCCHHHHHHHHHHh-hCChhhCcCHHHHHh
Confidence            22    2345668999999999 999999999999975

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.88  E-value=2.1e-23  Score=190.92  Aligned_cols=161  Identities=14%  Similarity=0.116  Sum_probs=125.2

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK---  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~---  158 (307)
                      .++|...+.||+|+||.||++... +++.||||+++...   ....+.+.+|..++..+ +|+||+++++++.+...   
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   98 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF   98 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence            578999999999999999999965 57899999986431   23456788999999988 89999999998765411   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        99 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~  178 (353)
T 2i0e_A           99 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT  178 (353)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCB
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCccc
Confidence                                                                                            


Q ss_pred             ----CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          159 ----QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       159 ----~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                          +|+.|+|||.+.+..++.++|||||||++|||++|+.||.....      ...... +...       ...++...
T Consensus       179 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~------~~~~~~-i~~~-------~~~~p~~~  244 (353)
T 2i0e_A          179 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE------DELFQS-IMEH-------NVAYPKSM  244 (353)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHH-HHHC-------CCCCCTTS
T ss_pred             ccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH------HHHHHH-HHhC-------CCCCCCCC
Confidence                07889999999999999999999999999999999999964321      111111 1111       12334456


Q ss_pred             HHHHHHHhccccCCCCCCCCCC-----HHHHHH
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPL-----MSFVVS  262 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs-----~~~vl~  262 (307)
                      +..+.+++..|+ ..||.+||+     +.++++
T Consensus       245 s~~~~~li~~lL-~~dP~~R~~~~~~~~~~i~~  276 (353)
T 2i0e_A          245 SKEAVAICKGLM-TKHPGKRLGCGPEGERDIKE  276 (353)
T ss_dssp             CHHHHHHHHHHT-CSCTTSCTTCSTTHHHHHHT
T ss_pred             CHHHHHHHHHHh-hcCHHHcCCCCCCCHHHHhc
Confidence            678999999999 999999995     466654

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.88  E-value=7.4e-23  Score=192.01  Aligned_cols=113  Identities=19%  Similarity=0.229  Sum_probs=94.5

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhC------CCCCccceeeeeecCCC-
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISAL------QHPNLVKLYRLCTETLK-  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~g~~~~~~~-  158 (307)
                      .++|...+.||+|+||.||+|... +++.||||++... ....+.+.+|+.++..+      +|+||+++++++..... 
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  174 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI  174 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence            456999999999999999999854 6889999999653 33456788888888876      57799999988764310 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       175 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~  254 (429)
T 3kvw_A          175 CMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ  254 (429)
T ss_dssp             EEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred             EEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecCC
Confidence                                                                                            


Q ss_pred             ------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCC
Q 045092          159 ------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICR  200 (307)
Q Consensus       159 ------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~  200 (307)
                            +|+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus       255 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~  302 (429)
T 3kvw_A          255 RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE  302 (429)
T ss_dssp             CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence                  078899999999999999999999999999999999999644

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.88  E-value=3.2e-23  Score=200.36  Aligned_cols=165  Identities=22%  Similarity=0.260  Sum_probs=128.3

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      .++|...+.||+|+||.||+|... +|+.||||++....   ......+.+|+.+|.+++|+||+++++++.+....   
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence            467999999999999999999964 79999999986431   23346789999999999999999999987654100   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~  342 (576)
T 2acx_A          263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI  342 (576)
T ss_dssp             ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCE
T ss_pred             EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccCccc
Confidence                                                                                            


Q ss_pred             -----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          160 -----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       160 -----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                           |+.|+|||++.++.++.++|||||||++|||++|+.||........  . ..+...+..       ....++..+
T Consensus       343 ~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~--~-~~i~~~i~~-------~~~~~p~~~  412 (576)
T 2acx_A          343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK--R-EEVERLVKE-------VPEEYSERF  412 (576)
T ss_dssp             ECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC--H-HHHHHHHHH-------CCCCCCTTS
T ss_pred             cccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh--H-HHHHHHhhc-------ccccCCccC
Confidence                 8889999999998999999999999999999999999975432211  1 111121111       122334456


Q ss_pred             HHHHHHHhccccCCCCCCCCC-----CHHHHHH
Q 045092          235 YRRTSDGNDQCSSSVTPTNRP-----LMSFVVS  262 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RP-----s~~~vl~  262 (307)
                      +..+.+++..|+ +.||.+||     ++.++++
T Consensus       413 s~~~~dLI~~lL-~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          413 SPQARSLCSQLL-CKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             CHHHHHHHHHHT-CSSGGGSTTCSSSHHHHHHT
T ss_pred             CHHHHHHHHHhc-cCCHHHcCCCCCCCHHHHHh
Confidence            678999999999 99999999     6788875

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.88  E-value=7.5e-23  Score=192.09  Aligned_cols=70  Identities=20%  Similarity=0.380  Sum_probs=59.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecC
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTET  156 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~  156 (307)
                      .++|...+.||+|+||.||+|.. .+++.||||++...  .....+.+.+|+.+|.+++|+||+++++++...
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~   97 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPD   97 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCS
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecC
Confidence            56899999999999999999995 47889999999753  334456899999999999999999999887543

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.88  E-value=9.2e-24  Score=194.66  Aligned_cols=157  Identities=8%  Similarity=0.021  Sum_probs=116.7

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC---ChhcHHHHHHHH---HHHhhCCCCCccceeeee------
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK---SKQGNREIVNEI---GMISALQHPNLVKLYRLC------  153 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~---~~l~~l~h~niv~l~g~~------  153 (307)
                      .++|...+.||+|+||.||+|.. .+|+.||||++...   .....+.+.+|+   +.+++++|||||++++.+      
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            46788899999999999999994 57999999998632   334457899999   555566899999988322      


Q ss_pred             -ecCC-----------------------------------------C-------C-------------------------
Q 045092          154 -TETL-----------------------------------------K-------Q-------------------------  159 (307)
Q Consensus       154 -~~~~-----------------------------------------~-------~-------------------------  159 (307)
                       .+..                                         .       .                         
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrD  231 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTY  231 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence             2110                                         0       0                         


Q ss_pred             ---------------------------------CccccchhhhccC-----------CCCchhHHHHHHHHHHHHHhCCC
Q 045092          160 ---------------------------------PIVYMAPEYAKHG-----------YLTDKAEVCSFGIVTLEIESGRS  195 (307)
Q Consensus       160 ---------------------------------t~~y~aPE~~~~~-----------~~~~~sDV~s~Gvvl~elltg~~  195 (307)
                                                       .+.|+|||++.+.           .++.++|||||||++|||++|+.
T Consensus       232 ikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~  311 (377)
T 3byv_A          232 LRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADL  311 (377)
T ss_dssp             CCGGGEEECTTCCEEECCGGGCEETTCEEECCCCTTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred             CCHHHEEEcCCCCEEEEechhheecCCcccCCCCcCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCC
Confidence                                             3789999999887           89999999999999999999999


Q ss_pred             CCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          196 NVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       196 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ||........                ..... . ....++..+.+++..|+ +.||.+||++.++++
T Consensus       312 Pf~~~~~~~~----------------~~~~~-~-~~~~~~~~~~~li~~~L-~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          312 PITKDAALGG----------------SEWIF-R-SCKNIPQPVRALLEGFL-RYPKEDRLLPLQAME  359 (377)
T ss_dssp             CC------CC----------------SGGGG-S-SCCCCCHHHHHHHHHHT-CSSGGGCCCHHHHHT
T ss_pred             CCcccccccc----------------hhhhh-h-hccCCCHHHHHHHHHHc-CCCchhCCCHHHHhh
Confidence            9964332111                11111 1 11345568999999999 999999999999975

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.88  E-value=1.2e-22  Score=188.82  Aligned_cols=164  Identities=11%  Similarity=0.078  Sum_probs=120.6

Q ss_pred             hcCcccC-CcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC-----
Q 045092           87 TNNFASE-NEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        87 t~~f~~~-~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~-----  158 (307)
                      .++|... +.||+|+||.||++... +++.||||++...     ..+.+|+.++.++ +|+||+++++++.....     
T Consensus        60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~  134 (400)
T 1nxk_A           60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL  134 (400)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence            4567765 68999999999999954 7899999998532     4577899887554 89999999987753100     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~  214 (400)
T 1nxk_A          135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET  214 (400)
T ss_dssp             EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEeccccccc
Confidence                                                                                            


Q ss_pred             ----------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcc-cHHHHHHHHHHhhhhhccccc
Q 045092          159 ----------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKF-YLLDWLGSYLKRARKLNGASC  227 (307)
Q Consensus       159 ----------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~  227 (307)
                                +|+.|+|||++.++.++.++|||||||++|||++|+.||......... .+.    ..+..+. . .. .
T Consensus       215 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~----~~i~~~~-~-~~-~  287 (400)
T 1nxk_A          215 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK----TRIRMGQ-Y-EF-P  287 (400)
T ss_dssp             C-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHH----HHHHHTC-C-CC-C
T ss_pred             CCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHH----HHHHcCc-c-cC-C
Confidence                      077899999999999999999999999999999999999654332211 111    1111111 1 11 1


Q ss_pred             CCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          228 SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       228 ~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ......++.++.+++..|+ +.||.+||++.++++.
T Consensus       288 ~~~~~~~s~~~~~li~~~L-~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          288 NPEWSEVSEEVKMLIRNLL-KTEPTQRMTITEFMNH  322 (400)
T ss_dssp             TTTTTTSCHHHHHHHHTTS-CSSGGGSCCHHHHHHS
T ss_pred             CcccccCCHHHHHHHHHHC-CCChhHCcCHHHHhcC
Confidence            1111345668999999999 9999999999999874

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.88  E-value=7.7e-23  Score=194.54  Aligned_cols=173  Identities=15%  Similarity=0.139  Sum_probs=125.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCC-ccceeeeeecCCC------
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPN-LVKLYRLCTETLK------  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~g~~~~~~~------  158 (307)
                      .++|.+.+.||+|+||.||+|.. .+++.||||++.....  ...+.+|+.++..++|.+ |..+..++.....      
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            46899999999999999999995 5789999998764432  235889999999997754 4444333222100      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        84 ~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~  163 (483)
T 3sv0_A           84 LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQ  163 (483)
T ss_dssp             CCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred             CCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcccc
Confidence                                                                                            


Q ss_pred             -----------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhccccc
Q 045092          159 -----------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC  227 (307)
Q Consensus       159 -----------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  227 (307)
                                 +|+.|+|||.+.+..++.++|||||||++|||++|+.||..............+....     ... ..
T Consensus       164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~-----~~~-~~  237 (483)
T 3sv0_A          164 HIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK-----VAT-SI  237 (483)
T ss_dssp             BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHH-----HHS-CH
T ss_pred             ccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcc-----ccc-cH
Confidence                       0668999999999999999999999999999999999997544333222221111111     111 11


Q ss_pred             CCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          228 SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       228 ~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      ..+...++.++.+++..|+ +.+|++||++.+|++.|+...
T Consensus       238 ~~l~~~~p~~l~~li~~cl-~~dP~~RPs~~el~~~L~~l~  277 (483)
T 3sv0_A          238 EALCRGYPTEFASYFHYCR-SLRFDDKPDYSYLKRLFRDLF  277 (483)
T ss_dssp             HHHHTTSCHHHHHHHHHHH-TCCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHhcCCcHHHHHHHHHHh-cCChhhCcCHHHHHHHHHHHH
Confidence            1122345668999999999 999999999999999887753

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.88  E-value=7.4e-23  Score=196.96  Aligned_cols=164  Identities=17%  Similarity=0.202  Sum_probs=125.9

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      ++|...+.||+|+||.||++... +|+.||||++....   ......+.+|+.++.+++||||+++++++.+...     
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm  264 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM  264 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence            67888899999999999999964 78999999986432   2334678999999999999999999988765410     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~  344 (543)
T 3c4z_A          265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT  344 (543)
T ss_dssp             CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred             EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc
Confidence                                                                                            


Q ss_pred             ------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCch
Q 045092          159 ------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGF  232 (307)
Q Consensus       159 ------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  232 (307)
                            +|+.|+|||.+.+..++.++|||||||++|||++|+.||.......  .... +...+...       ...++.
T Consensus       345 ~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~--~~~~-~~~~i~~~-------~~~~p~  414 (543)
T 3c4z_A          345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV--ENKE-LKQRVLEQ-------AVTYPD  414 (543)
T ss_dssp             CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC--CHHH-HHHHHHHC-------CCCCCT
T ss_pred             ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch--hHHH-HHHHHhhc-------ccCCCc
Confidence                  0788999999999999999999999999999999999996543211  1111 11111111       122344


Q ss_pred             hhHHHHHHHhccccCCCCCCCCCCH-----HHHHH
Q 045092          233 KFYRRTSDGNDQCSSSVTPTNRPLM-----SFVVS  262 (307)
Q Consensus       233 ~~~~~~~~l~~~C~~~~dP~~RPs~-----~~vl~  262 (307)
                      .++..+.+++..|+ +.||.+||++     .++++
T Consensus       415 ~~s~~~~~li~~lL-~~dP~~R~~~~~~~a~ei~~  448 (543)
T 3c4z_A          415 KFSPASKDFCEALL-QKDPEKRLGFRDGSCDGLRT  448 (543)
T ss_dssp             TSCHHHHHHHHHHS-CSSGGGSCCCBTTBSHHHHT
T ss_pred             ccCHHHHHHHHHhc-cCCHhHCCCCcccCHHHHHc
Confidence            56678999999999 9999999975     56653

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.88  E-value=1.8e-22  Score=186.18  Aligned_cols=174  Identities=12%  Similarity=0.076  Sum_probs=125.9

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCC--------CCCccceeeeeec--
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQ--------HPNLVKLYRLCTE--  155 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~g~~~~--  155 (307)
                      .++|.+.+.||+|+||.||+|.. .+++.||||++... ....+.+.+|+.++.+++        |+||+++++++..  
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~  114 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG  114 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence            46799999999999999999984 47889999999643 344567899999999885        7889999987651  


Q ss_pred             --C-----------------------------------------------C-----------------C-----------
Q 045092          156 --T-----------------------------------------------L-----------------K-----------  158 (307)
Q Consensus       156 --~-----------------------------------------------~-----------------~-----------  158 (307)
                        .                                               .                 .           
T Consensus       115 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~  194 (397)
T 1wak_A          115 VNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEA  194 (397)
T ss_dssp             TTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred             CCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhh
Confidence              1                                               0                 0           


Q ss_pred             ------------------------------------------------------------CCccccchhhhccCCCCchh
Q 045092          159 ------------------------------------------------------------QPIVYMAPEYAKHGYLTDKA  178 (307)
Q Consensus       159 ------------------------------------------------------------~t~~y~aPE~~~~~~~~~~s  178 (307)
                                                                                  +|+.|+|||++.+..++.++
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  274 (397)
T 1wak_A          195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPA  274 (397)
T ss_dssp             C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHH
T ss_pred             HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHH
Confidence                                                                        05679999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHh-----------hhhhccccc--------------------
Q 045092          179 EVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKR-----------ARKLNGASC--------------------  227 (307)
Q Consensus       179 DV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~-----------~~~~~~~~~--------------------  227 (307)
                      |||||||++|||++|+.||..........-.+.+......           +........                    
T Consensus       275 DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (397)
T 1wak_A          275 DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVL  354 (397)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHH
T ss_pred             HHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhh
Confidence            9999999999999999999754433322111111111110           000000000                    


Q ss_pred             ---CCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          228 ---SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       228 ---~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                         .......+..+.+++..|+ +.||.+|||+.|+++
T Consensus       355 ~~~~~~~~~~~~~~~~li~~~L-~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          355 VEKYEWSQEEAAGFTDFLLPML-ELIPEKRATAAECLR  391 (397)
T ss_dssp             HHTSCCCHHHHHHHHHHHGGGG-CSSGGGSCCHHHHHT
T ss_pred             hhhcccchhhHHHHHHHHHHHh-ccChhhcCCHHHHhh
Confidence               0112334457889999999 999999999999975

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.88  E-value=1.7e-22  Score=181.76  Aligned_cols=170  Identities=21%  Similarity=0.321  Sum_probs=122.7

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEE--cCCCEEEEEEccCCC--hhcHHHHHHHHHHHhhC---CCCCccceeeeeecCC-
Q 045092           86 ATNNFASENEISERGFGPVYRGLL--ADGKVIEVKQLSSKS--KQGNREIVNEIGMISAL---QHPNLVKLYRLCTETL-  157 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~--~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~g~~~~~~-  157 (307)
                      +.++|...+.||+|+||.||+|..  .+++.||||++....  ......+.+|+.++..+   +||||+++++++.... 
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            457899999999999999999996  467899999986432  22234567788877766   8999999999876210 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          158 --------------------------------------------------------------------------------  157 (307)
Q Consensus       158 --------------------------------------------------------------------------------  157 (307)
                                                                                                      
T Consensus        89 ~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~  168 (326)
T 1blx_A           89 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR  168 (326)
T ss_dssp             SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred             CCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcccc
Confidence                                                                                            


Q ss_pred             -----------CCCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhh-----h
Q 045092          158 -----------KQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRAR-----K  221 (307)
Q Consensus       158 -----------~~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~-----~  221 (307)
                                 ..|+.|+|||.+.++.++.++|||||||++|||++|+.||......      +.+........     .
T Consensus       169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~i~~~~~~~~~~~  242 (326)
T 1blx_A          169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV------DQLGKILDVIGLPGEED  242 (326)
T ss_dssp             CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHHHCCCCGGG
T ss_pred             cccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH------HHHHHHHHHcCCCCccc
Confidence                       0077899999999999999999999999999999999999643221      11111111100     0


Q ss_pred             hccc-----------c---cCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          222 LNGA-----------S---CSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       222 ~~~~-----------~---~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ....           .   ...+...++..+.+++..|+ +.||.+||++.++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L-~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          243 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCL-TFNPAKRISAYSALS  296 (326)
T ss_dssp             SCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHS-CSSTTTSCCHHHHHT
T ss_pred             CccccccchhhhcccCcchhhhccccCCHHHHHHHHHHc-CCCcccCCCHHHHhc
Confidence            0000           0   00112334558899999999 999999999999985

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.88  E-value=5.8e-23  Score=187.92  Aligned_cols=167  Identities=20%  Similarity=0.225  Sum_probs=125.5

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE----cCCCEEEEEEccCCC----hhcHHHHHHHHHHHhhC-CCCCccceeeeeecCC
Q 045092           87 TNNFASENEISERGFGPVYRGLL----ADGKVIEVKQLSSKS----KQGNREIVNEIGMISAL-QHPNLVKLYRLCTETL  157 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~----~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~  157 (307)
                      .++|...+.||+|+||.||++..    .+++.||||+++...    ....+.+.+|++++.++ +|+||+++++++....
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  132 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  132 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence            46799999999999999999996    378999999986432    22345678899999999 7999999998876541


Q ss_pred             CC------------------------------------------------------------------------------
Q 045092          158 KQ------------------------------------------------------------------------------  159 (307)
Q Consensus       158 ~~------------------------------------------------------------------------------  159 (307)
                      ..                                                                              
T Consensus       133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~  212 (355)
T 1vzo_A          133 KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVAD  212 (355)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGG
T ss_pred             eEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccC
Confidence            10                                                                              


Q ss_pred             ----------CccccchhhhccC--CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhccccc
Q 045092          160 ----------PIVYMAPEYAKHG--YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC  227 (307)
Q Consensus       160 ----------t~~y~aPE~~~~~--~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  227 (307)
                                |+.|+|||++.++  .++.++|||||||++|||++|+.||.......  ...........        ..
T Consensus       213 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~--~~~~~~~~~~~--------~~  282 (355)
T 1vzo_A          213 ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN--SQAEISRRILK--------SE  282 (355)
T ss_dssp             GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC--CHHHHHHHHHH--------CC
T ss_pred             CCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc--hHHHHHHHHhc--------cC
Confidence                      7889999999853  47899999999999999999999996433222  12221111111        12


Q ss_pred             CCCchhhHHHHHHHhccccCCCCCCCCC-----CHHHHHHHh
Q 045092          228 SKFGFKFYRRTSDGNDQCSSSVTPTNRP-----LMSFVVSML  264 (307)
Q Consensus       228 ~~l~~~~~~~~~~l~~~C~~~~dP~~RP-----s~~~vl~~L  264 (307)
                      +.++..++..+.+++.+|+ ..||.+||     ++.++++..
T Consensus       283 ~~~~~~~~~~~~~li~~~L-~~dP~~R~~~~~~s~~ell~h~  323 (355)
T 1vzo_A          283 PPYPQEMSALAKDLIQRLL-MKDPKKRLGCGPRDADEIKEHL  323 (355)
T ss_dssp             CCCCTTSCHHHHHHHHHHT-CSSGGGSTTSSTTTHHHHHTSG
T ss_pred             CCCCcccCHHHHHHHHHHh-hhCHHHhcCCCCCCHHHHHcCc
Confidence            3344556678899999999 99999999     899987653

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.88  E-value=8.4e-23  Score=184.66  Aligned_cols=177  Identities=16%  Similarity=0.245  Sum_probs=123.1

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHH--hhCCCCCccceeeeeecC--------
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMI--SALQHPNLVKLYRLCTET--------  156 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l--~~l~h~niv~l~g~~~~~--------  156 (307)
                      .++|...+.||+|+||.||+|.. +++.||||++...   ....+..|.+++  ..++|+||+++++++...        
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   87 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY   87 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence            46889999999999999999986 6889999998543   234455555554  457999999998633210        


Q ss_pred             -----------------------------------------CC---------C---------------------------
Q 045092          157 -----------------------------------------LK---------Q---------------------------  159 (307)
Q Consensus       157 -----------------------------------------~~---------~---------------------------  159 (307)
                                                               ..         +                           
T Consensus        88 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a  167 (336)
T 3g2f_A           88 LLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS  167 (336)
T ss_dssp             EEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccce
Confidence                                                     00         1                           


Q ss_pred             -----------------------Cccccchhhhcc-------CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCccc--
Q 045092          160 -----------------------PIVYMAPEYAKH-------GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFY--  207 (307)
Q Consensus       160 -----------------------t~~y~aPE~~~~-------~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~--  207 (307)
                                             |+.|+|||.+.+       ..++.++|||||||++|||++|..|+..........  
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~  247 (336)
T 3g2f_A          168 MRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMA  247 (336)
T ss_dssp             EECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCT
T ss_pred             eecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHh
Confidence                                   678999999876       356678999999999999999988774332211100  


Q ss_pred             H---------HHHHHHHHHhhhhhcccccCCCch------hhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccccccc
Q 045092          208 L---------LDWLGSYLKRARKLNGASCSKFGF------KFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAEVCS  272 (307)
Q Consensus       208 l---------~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~v~~  272 (307)
                      +         .........     .....+.++.      .++..+.+++..|| +.||++|||+.++++.|+.+...|.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl-~~dP~~Rps~~e~l~~L~~ll~~~~  321 (336)
T 3g2f_A          248 FQTEVGNHPTFEDMQVLVS-----REKQRPKFPEAWKENSLAVRSLKETIEDCW-DQDAEARLTAQXAEERMAELMMIWE  321 (336)
T ss_dssp             THHHHCSSCCHHHHHHHHT-----TSCCCCCCCTTCCCCSHHHHHHHHHHHHHS-CSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred             hhcccCCCchHHHHHhhhc-----ccccCCCCCcccccccchHHHHHHHHHHHh-cCChhhCcchHHHHHHHHHHHHHHH
Confidence            0         011111111     1111222222      24457999999999 9999999999999999999877665


Q ss_pred             c
Q 045092          273 F  273 (307)
Q Consensus       273 ~  273 (307)
                      -
T Consensus       322 ~  322 (336)
T 3g2f_A          322 R  322 (336)
T ss_dssp             C
T ss_pred             h
Confidence            3

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.88  E-value=4e-23  Score=185.04  Aligned_cols=159  Identities=18%  Similarity=0.255  Sum_probs=117.3

Q ss_pred             HHHhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChh------cHHHHHHHHHHHhhC----CCCCccceeee
Q 045092           84 KAATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQ------GNREIVNEIGMISAL----QHPNLVKLYRL  152 (307)
Q Consensus        84 ~~~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l----~h~niv~l~g~  152 (307)
                      ....++|...+.||+|+||.||+|.. .+++.||||.+......      ....+.+|+.++.++    +|+||++++++
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~  106 (312)
T 2iwi_A           27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW  106 (312)
T ss_dssp             ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred             hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence            34467899999999999999999985 47899999999654321      223466799999988    89999999998


Q ss_pred             eecCCCC-------------------------------------------------------------------------
Q 045092          153 CTETLKQ-------------------------------------------------------------------------  159 (307)
Q Consensus       153 ~~~~~~~-------------------------------------------------------------------------  159 (307)
                      +......                                                                         
T Consensus       107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~  186 (312)
T 2iwi_A          107 FETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGS  186 (312)
T ss_dssp             C-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSS
T ss_pred             EecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcch
Confidence            7643110                                                                         


Q ss_pred             --------------CccccchhhhccCCCC-chhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcc
Q 045092          160 --------------PIVYMAPEYAKHGYLT-DKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNG  224 (307)
Q Consensus       160 --------------t~~y~aPE~~~~~~~~-~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  224 (307)
                                    |..|+|||++.++.+. .++||||||+++|||++|+.||....            . ....     
T Consensus       187 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------------~-~~~~-----  248 (312)
T 2iwi_A          187 GALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------------E-ILEA-----  248 (312)
T ss_dssp             CEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------H-HHHT-----
T ss_pred             hhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------------H-Hhhh-----
Confidence                          7789999998877664 58999999999999999999995211            0 0000     


Q ss_pred             cccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          225 ASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       225 ~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                        ...++..++..+.+++..|+ +.||++||++.++++.
T Consensus       249 --~~~~~~~~~~~~~~li~~~l-~~~p~~Rps~~e~l~~  284 (312)
T 2iwi_A          249 --ELHFPAHVSPDCCALIRRCL-APKPSSRPSLEEILLD  284 (312)
T ss_dssp             --CCCCCTTSCHHHHHHHHHHT-CSSTTTSCCHHHHHHS
T ss_pred             --ccCCcccCCHHHHHHHHHHc-cCChhhCcCHHHHhcC
Confidence              11233455668899999999 9999999999999873

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.88  E-value=2.1e-22  Score=180.41  Aligned_cols=163  Identities=20%  Similarity=0.274  Sum_probs=113.1

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh-hcH-HHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK-QGN-REIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~-~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      .++|...+.||+|+||.||+|... +++.||||.+..... ... +.+.++..++..++|+||+++++++.+....    
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~  103 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM  103 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence            567888999999999999999964 789999999875432 222 3344555677888999999999988654110    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       104 e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~  183 (318)
T 2dyl_A          104 ELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDR  183 (318)
T ss_dssp             CCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC-----------
T ss_pred             eccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCccccc
Confidence                                                                                            


Q ss_pred             ---Cccccchhhhc-----cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCc
Q 045092          160 ---PIVYMAPEYAK-----HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFG  231 (307)
Q Consensus       160 ---t~~y~aPE~~~-----~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~  231 (307)
                         |+.|+|||.+.     .+.++.++||||||+++|||++|+.||.....  .   ..........       ..+.++
T Consensus       184 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~---~~~~~~~~~~-------~~~~~~  251 (318)
T 2dyl_A          184 SAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT--D---FEVLTKVLQE-------EPPLLP  251 (318)
T ss_dssp             ---CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS--H---HHHHHHHHHS-------CCCCCC
T ss_pred             cCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc--c---HHHHHHHhcc-------CCCCCC
Confidence               77899999984     56789999999999999999999999963221  1   1111221111       111111


Q ss_pred             --hhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          232 --FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       232 --~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                        ..++..+.+++..|+ +.||.+||++.++++
T Consensus       252 ~~~~~~~~l~~li~~~l-~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          252 GHMGFSGDFQSFVKDCL-TKDHRKRPKYNKLLE  283 (318)
T ss_dssp             SSSCCCHHHHHHHHHHT-CSCTTTSCCHHHHTT
T ss_pred             ccCCCCHHHHHHHHHHc-cCChhHCcCHHHHhh
Confidence              235668999999999 999999999999875

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.88  E-value=3.1e-23  Score=191.16  Aligned_cols=157  Identities=19%  Similarity=0.188  Sum_probs=113.4

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHH-HhhCCCCCccceeeeeecCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGM-ISALQHPNLVKLYRLCTETLK---  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~-l~~l~h~niv~l~g~~~~~~~---  158 (307)
                      .++|...+.||+|+||.||+++.. +++.||||+++...   ......+.+|..+ +..++||||+++++++.+...   
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l  116 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF  116 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence            467899999999999999999964 68899999986542   2234456777776 467899999999998876411   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       117 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~~  196 (373)
T 2r5t_A          117 VLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTT  196 (373)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCCC
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCCCcc
Confidence                                                                                            


Q ss_pred             ----CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          159 ----QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       159 ----~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                          +|+.|+|||.+.+..++.++|||||||++|||++|+.||.....      .+...... ..       ...++..+
T Consensus       197 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~------~~~~~~i~-~~-------~~~~~~~~  262 (373)
T 2r5t_A          197 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT------AEMYDNIL-NK-------PLQLKPNI  262 (373)
T ss_dssp             CSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH------HHHHHHHH-HS-------CCCCCSSS
T ss_pred             ccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHH-hc-------ccCCCCCC
Confidence                07889999999999999999999999999999999999964321      11111111 11       11233445


Q ss_pred             HHHHHHHhccccCCCCCCCCCCHH
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPLMS  258 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs~~  258 (307)
                      +..+.+++..|+ +.||.+||++.
T Consensus       263 ~~~~~~li~~lL-~~dp~~R~~~~  285 (373)
T 2r5t_A          263 TNSARHLLEGLL-QKDRTKRLGAK  285 (373)
T ss_dssp             CHHHHHHHHHHT-CSSGGGSTTTT
T ss_pred             CHHHHHHHHHHc-ccCHHhCCCCC
Confidence            668899999999 99999999975

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.88  E-value=6.4e-23  Score=186.32  Aligned_cols=167  Identities=12%  Similarity=0.090  Sum_probs=123.4

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhc-----------------HHHHHHHHHHHhhCCCCCccce
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQG-----------------NREIVNEIGMISALQHPNLVKL  149 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~l  149 (307)
                      .++|...+.||+|+||.||+|.. +++.||||.+.......                 .+.+.+|+.++.+++|+||+++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            46899999999999999999998 89999999986432111                 1789999999999999999999


Q ss_pred             eeeeecCC----------------------------CC------------------------------------------
Q 045092          150 YRLCTETL----------------------------KQ------------------------------------------  159 (307)
Q Consensus       150 ~g~~~~~~----------------------------~~------------------------------------------  159 (307)
                      ++++.+..                            ..                                          
T Consensus       109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~  188 (348)
T 2pml_X          109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKN  188 (348)
T ss_dssp             SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTT
T ss_pred             EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCC
Confidence            98765431                            00                                          


Q ss_pred             ------------------------CccccchhhhccC-CCCc-hhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHH
Q 045092          160 ------------------------PIVYMAPEYAKHG-YLTD-KAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLG  213 (307)
Q Consensus       160 ------------------------t~~y~aPE~~~~~-~~~~-~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~  213 (307)
                                              |+.|+|||.+.++ .++. ++||||||++++||++|+.||......  ..+    .
T Consensus       189 ~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~----~  262 (348)
T 2pml_X          189 GRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL--VEL----F  262 (348)
T ss_dssp             SCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS--HHH----H
T ss_pred             CcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH--HHH----H
Confidence                                    7789999999877 6666 999999999999999999999643321  111    1


Q ss_pred             HHHHhhhhhccccc-------------CCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          214 SYLKRARKLNGASC-------------SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       214 ~~~~~~~~~~~~~~-------------~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ..+..+. ......             ......++..+.+++..|+ +.||.+||++.++++
T Consensus       263 ~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L-~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          263 NNIRTKN-IEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFL-RKNPAERITSEDALK  322 (348)
T ss_dssp             HHHTSCC-CCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHC-CSSGGGSCCHHHHHT
T ss_pred             HHHhccC-cCCccchhhhhccccccccccchhhcCHHHHHHHHHHc-cCChhhCCCHHHHhc
Confidence            1111111 000000             0001335568999999999 999999999999986

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.88  E-value=1.4e-22  Score=188.09  Aligned_cols=169  Identities=18%  Similarity=0.218  Sum_probs=119.3

Q ss_pred             cCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--------
Q 045092           88 NNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--------  159 (307)
                      .+|...+.||+|+||.||+|....+..||+|++.....    ...+|+++++.++|+||+++++++......        
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l  115 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL  115 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence            46888999999999999999976666799998754322    223699999999999999999887432110        


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~  195 (394)
T 4e7w_A          116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG  195 (394)
T ss_dssp             EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred             EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCC
Confidence                                                                                            


Q ss_pred             --------CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHH-------HHHh-hhhh
Q 045092          160 --------PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGS-------YLKR-ARKL  222 (307)
Q Consensus       160 --------t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~-------~~~~-~~~~  222 (307)
                              |+.|+|||.+.+. .++.++|||||||++|||++|+.||.......  .+...+..       .+.. ....
T Consensus       196 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~--~l~~i~~~~g~p~~~~~~~~~~~~  273 (394)
T 4e7w_A          196 EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID--QLVEIIKVLGTPSREQIKTMNPNY  273 (394)
T ss_dssp             CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCCCCHHHHHHHCGGG
T ss_pred             CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCCHHHHHhhChhh
Confidence                    7789999998764 58999999999999999999999996433211  11111110       0000 0000


Q ss_pred             cccccCC---------CchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          223 NGASCSK---------FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       223 ~~~~~~~---------l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .....+.         +....+..+.+++.+|+ +.||.+||++.++++.
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L-~~dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          274 MEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLL-EYTPSARLTAIEALCH  322 (394)
T ss_dssp             SSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHC-CSSGGGSCCHHHHHTS
T ss_pred             hhhccccccCCcHHHhccccCCHHHHHHHHHHh-CCChhhCCCHHHHhcC
Confidence            0010111         11224558999999999 9999999999999863

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.87  E-value=8.7e-22  Score=174.76  Aligned_cols=163  Identities=17%  Similarity=0.253  Sum_probs=120.9

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-------
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-------  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-------  158 (307)
                      .++|+..+.||+|+||.||+|.. .+++.||||.+... ....+.+.+|+.++.+++||||+++++++.+...       
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA   83 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence            56799999999999999999995 47899999998543 3445789999999999999999999987643100       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~  163 (303)
T 1zy4_A           84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA  163 (303)
T ss_dssp             --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCC
T ss_pred             cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcch
Confidence                                                                                            


Q ss_pred             ----------------------------CCccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHH
Q 045092          159 ----------------------------QPIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLL  209 (307)
Q Consensus       159 ----------------------------~t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~  209 (307)
                                                  +|+.|+|||.+.+ +.++.++|||||||++|||++   |+....  .   ..
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~--~---~~  235 (303)
T 1zy4_A          164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM--E---RV  235 (303)
T ss_dssp             SCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH--H---HH
T ss_pred             hhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch--h---HH
Confidence                                        0345999999875 478999999999999999998   442110  1   01


Q ss_pred             HHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          210 DWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      . ....+..   ......+.+....+..+.+++..|+ +.||.+||++.++++.
T Consensus       236 ~-~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~~l-~~dp~~Rps~~~ll~h  284 (303)
T 1zy4_A          236 N-ILKKLRS---VSIEFPPDFDDNKMKVEKKIIRLLI-DHDPNKRPGARTLLNS  284 (303)
T ss_dssp             H-HHHHHHS---TTCCCCTTCCTTTSHHHHHHHHHHT-CSSGGGSCCHHHHHHS
T ss_pred             H-HHHhccc---cccccCccccccchHHHHHHHHHHH-hcCcccCcCHHHHhCC
Confidence            1 1111111   1122233444555667899999999 9999999999999863

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.87  E-value=2.3e-22  Score=198.65  Aligned_cols=162  Identities=14%  Similarity=0.108  Sum_probs=125.9

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC---ChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC--
Q 045092           86 ATNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK---SKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK--  158 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~--  158 (307)
                      ..++|...+.||+|+||.||+|... +++.||||+++..   .....+.+..|..++..+ +|+||+++++++.+...  
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            3467999999999999999999954 7889999998643   223456788999999988 79999999988765411  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       419 lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~  498 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT  498 (674)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCC
T ss_pred             EEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCCcc
Confidence                                                                                            


Q ss_pred             -----CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchh
Q 045092          159 -----QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFK  233 (307)
Q Consensus       159 -----~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  233 (307)
                           +|+.|+|||++.+..++.++|||||||++|||++|+.||.....      .+ +...+...       ...++..
T Consensus       499 ~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~------~~-~~~~i~~~-------~~~~p~~  564 (674)
T 3pfq_A          499 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE------DE-LFQSIMEH-------NVAYPKS  564 (674)
T ss_dssp             BCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH------HH-HHHHHHSS-------CCCCCTT
T ss_pred             cccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH------HH-HHHHHHhC-------CCCCCcc
Confidence                 08899999999999999999999999999999999999964322      11 11111111       1233455


Q ss_pred             hHHHHHHHhccccCCCCCCCCCCH-----HHHHH
Q 045092          234 FYRRTSDGNDQCSSSVTPTNRPLM-----SFVVS  262 (307)
Q Consensus       234 ~~~~~~~l~~~C~~~~dP~~RPs~-----~~vl~  262 (307)
                      .+.++.+++..|+ +.||.+||++     .+|++
T Consensus       565 ~s~~~~~li~~lL-~~dP~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          565 MSKEAVAICKGLM-TKHPGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             SCHHHHHHHHHHS-CSSSTTCTTCSTTHHHHHHS
T ss_pred             CCHHHHHHHHHHc-cCCHHHCCCCCCCcHHHHhc
Confidence            6778999999999 9999999997     66653

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.87  E-value=2.1e-22  Score=178.97  Aligned_cols=165  Identities=8%  Similarity=0.031  Sum_probs=121.1

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      ++|.+.+.||+|+||.||+|... +++.||||.+....   ....+.|.+|+.++.+++|+||+++++++.+....    
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            56888999999999999999964 58999999997543   23346899999999999999999999998765211    


Q ss_pred             -------------------------------------------------------------CccccchhhhccCCCCchh
Q 045092          160 -------------------------------------------------------------PIVYMAPEYAKHGYLTDKA  178 (307)
Q Consensus       160 -------------------------------------------------------------t~~y~aPE~~~~~~~~~~s  178 (307)
                                                                                   +.+|++       .++.++
T Consensus       111 e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~~~-------~~~~~~  183 (286)
T 3uqc_A          111 EWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPATMP-------DANPQD  183 (286)
T ss_dssp             ECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCCCCT-------TCCHHH
T ss_pred             EecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEeccccC-------CCCchh
Confidence                                                                         333433       368899


Q ss_pred             HHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhccccc--CCCchhhHHHHHHHhccccCCCCCCCCCC
Q 045092          179 EVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASC--SKFGFKFYRRTSDGNDQCSSSVTPTNRPL  256 (307)
Q Consensus       179 DV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~l~~~C~~~~dP~~RPs  256 (307)
                      |||||||++|||++|+.||.............         ..+.....  ..+...++..+.+++.+|+ +.||.+| |
T Consensus       184 Di~slG~il~elltg~~Pf~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~l~~li~~~l-~~dP~~R-s  252 (286)
T 3uqc_A          184 DIRGIGASLYALLVNRWPLPEAGVRSGLAPAE---------RDTAGQPIEPADIDRDIPFQISAVAARSV-QGDGGIR-S  252 (286)
T ss_dssp             HHHHHHHHHHHHHHSEECSCCCSBCCCSEECC---------BCTTSCBCCHHHHCTTSCHHHHHHHHHHH-CTTSSCC-C
T ss_pred             HHHHHHHHHHHHHHCCCCCCcCCcchhhHHHH---------HHhccCCCChhhcccCCCHHHHHHHHHHc-ccCCccC-C
Confidence            99999999999999999997544322110000         00000000  0112345568999999999 9999999 9


Q ss_pred             HHHHHHHhcccccc
Q 045092          257 MSFVVSMLEDKAEV  270 (307)
Q Consensus       257 ~~~vl~~L~~~~~v  270 (307)
                      +.++++.|+.....
T Consensus       253 ~~el~~~L~~~~~~  266 (286)
T 3uqc_A          253 ASTLLNLMQQATAV  266 (286)
T ss_dssp             HHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHhcc
Confidence            99999999886543

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.87  E-value=4.3e-23  Score=185.97  Aligned_cols=158  Identities=16%  Similarity=0.308  Sum_probs=121.9

Q ss_pred             HHHhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChh------cHHHHHHHHHHHhhCC--CCCccceeeeee
Q 045092           84 KAATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQ------GNREIVNEIGMISALQ--HPNLVKLYRLCT  154 (307)
Q Consensus        84 ~~~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~g~~~  154 (307)
                      ....++|...+.||+|+||.||+|.. .+++.||||.+......      ....+.+|+.++.+++  |+||+++++++.
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~  118 (320)
T 3a99_A           39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE  118 (320)
T ss_dssp             -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred             CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence            34467899999999999999999985 47889999998643211      2245778999999996  599999999886


Q ss_pred             cCCC----------------------------------------------------------------------------
Q 045092          155 ETLK----------------------------------------------------------------------------  158 (307)
Q Consensus       155 ~~~~----------------------------------------------------------------------------  158 (307)
                      ....                                                                            
T Consensus       119 ~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~  198 (320)
T 3a99_A          119 RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA  198 (320)
T ss_dssp             CSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             cCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCcccc
Confidence            5411                                                                            


Q ss_pred             -----------CCccccchhhhccCCC-CchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccc
Q 045092          159 -----------QPIVYMAPEYAKHGYL-TDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGAS  226 (307)
Q Consensus       159 -----------~t~~y~aPE~~~~~~~-~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  226 (307)
                                 +|+.|+|||++.++.+ +.++||||||+++|||++|+.||....            . ...+   .   
T Consensus       199 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------------~-~~~~---~---  259 (320)
T 3a99_A          199 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------------E-IIRG---Q---  259 (320)
T ss_dssp             ECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------H-HHHC---C---
T ss_pred             ccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------------h-hhcc---c---
Confidence                       0778999999887665 678999999999999999999995311            0 0000   0   


Q ss_pred             cCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          227 CSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       227 ~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                       ..++..++..+.+++..|+ +.||.+||++.++++
T Consensus       260 -~~~~~~~~~~~~~li~~~l-~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          260 -VFFRQRVSSECQHLIRWCL-ALRPSDRPTFEEIQN  293 (320)
T ss_dssp             -CCCSSCCCHHHHHHHHHHT-CSSGGGSCCHHHHHT
T ss_pred             -ccccccCCHHHHHHHHHHc-cCChhhCcCHHHHhc
Confidence             1123345668999999999 999999999999986

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.87  E-value=2.1e-22  Score=189.10  Aligned_cols=161  Identities=15%  Similarity=0.165  Sum_probs=115.7

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC-------
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK-------  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~-------  158 (307)
                      ..+|...+.||+|+||.|+.....+++.||||++.....   ..+.+|+++|.++ +|||||++++++.+...       
T Consensus        23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~   99 (432)
T 3p23_A           23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL   99 (432)
T ss_dssp             TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence            346888899999999996654456789999999865432   2356899999999 89999999988765410       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       100 ~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~  179 (432)
T 3p23_A          100 CAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS  179 (432)
T ss_dssp             CSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------
T ss_pred             CCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcc
Confidence                                                                                            


Q ss_pred             --------CCccccchhhhc---cCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccc
Q 045092          159 --------QPIVYMAPEYAK---HGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGAS  226 (307)
Q Consensus       159 --------~t~~y~aPE~~~---~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  226 (307)
                              +|+.|+|||.+.   ...++.++|||||||+++||++ |+.||.......       . .....   .....
T Consensus       180 ~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~-------~-~~~~~---~~~~~  248 (432)
T 3p23_A          180 FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ-------A-NILLG---ACSLD  248 (432)
T ss_dssp             ------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH-------H-HHHTT---CCCCT
T ss_pred             eeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH-------H-HHHhc---cCCcc
Confidence                    178899999987   4567889999999999999999 899984322111       0 00000   00111


Q ss_pred             cCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          227 CSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       227 ~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ........+..+.+++..|+ +.||.+||++.++++
T Consensus       249 ~~~~~~~~~~~~~~li~~~L-~~dP~~Rps~~evl~  283 (432)
T 3p23_A          249 CLHPEKHEDVIARELIEKMI-AMDPQKRPSAKHVLK  283 (432)
T ss_dssp             TSCTTCHHHHHHHHHHHHHS-CSSGGGSCCHHHHHT
T ss_pred             ccCccccccHHHHHHHHHHH-hCCHhhCCCHHHHHh
Confidence            11112233446889999999 999999999999984

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.86  E-value=1.4e-21  Score=183.60  Aligned_cols=160  Identities=19%  Similarity=0.164  Sum_probs=117.3

Q ss_pred             cccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC----------
Q 045092           90 FASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK----------  158 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~----------  158 (307)
                      |...+.||+|+||+||.+...+|+.||||++...   ..+.+.+|+.++.++ +||||+++++++.+...          
T Consensus        17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~g   93 (434)
T 2rio_A           17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNL   93 (434)
T ss_dssp             EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCSE
T ss_pred             eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCCC
Confidence            4446789999999998766667999999998543   235678999999986 89999999987754310          


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        94 sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG  173 (434)
T 2rio_A           94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG  173 (434)
T ss_dssp             EHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCT
T ss_pred             CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccc
Confidence                                                                                            


Q ss_pred             --------------------CCccccchhhhcc-------CCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHH
Q 045092          159 --------------------QPIVYMAPEYAKH-------GYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLD  210 (307)
Q Consensus       159 --------------------~t~~y~aPE~~~~-------~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~  210 (307)
                                          +|+.|+|||++.+       +.++.++|||||||++|||++ |+.||.......      
T Consensus       174 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~------  247 (434)
T 2rio_A          174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE------  247 (434)
T ss_dssp             TCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH------
T ss_pred             cceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH------
Confidence                                0668999999875       678999999999999999999 999995332111      


Q ss_pred             HHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          211 WLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                        ........ .............+.++.+++..|+ +.||.+||++.++++
T Consensus       248 --~~i~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L-~~dP~~Rps~~eil~  295 (434)
T 2rio_A          248 --SNIIRGIF-SLDEMKCLHDRSLIAEATDLISQMI-DHDPLKRPTAMKVLR  295 (434)
T ss_dssp             --HHHHHTCC-CCCCCTTCCCHHHHHHHHHHHHHHT-CSSGGGSCCHHHHHT
T ss_pred             --HHHhcCCC-CcccccccccccchHHHHHHHHHHh-hCChhhCCCHHHHHh
Confidence              11111110 0011111112345668999999999 999999999999975

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.86  E-value=1.1e-21  Score=176.78  Aligned_cols=171  Identities=17%  Similarity=0.159  Sum_probs=122.3

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE--cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCC------ccceeeeeecCCC
Q 045092           87 TNNFASENEISERGFGPVYRGLL--ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPN------LVKLYRLCTETLK  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~--~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~g~~~~~~~  158 (307)
                      .++|...+.||+|+||.||+|..  .+++.||||+++.. ....+.+.+|+.++..++|+|      ++++++++.....
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~   91 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH   91 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence            45789999999999999999985  36789999998653 344567889999999886654      8998887654310


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        92 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~  171 (339)
T 1z57_A           92 ICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTL  171 (339)
T ss_dssp             EEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEE
T ss_pred             EEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccc
Confidence                                                                                            


Q ss_pred             ------------------------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHH
Q 045092          159 ------------------------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGS  214 (307)
Q Consensus       159 ------------------------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~  214 (307)
                                              +|+.|+|||.+.+..++.++|||||||++|||++|+.||........   ...+..
T Consensus       172 ~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~~~~  248 (339)
T 1z57_A          172 INPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH---LAMMER  248 (339)
T ss_dssp             SCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHH---HHHHHH
T ss_pred             cCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHH
Confidence                                    06789999999998999999999999999999999999964332211   111111


Q ss_pred             HHH--------hhhh------------------------hccccc-CCCchhhHHHHHHHhccccCCCCCCCCCCHHHHH
Q 045092          215 YLK--------RARK------------------------LNGASC-SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVV  261 (307)
Q Consensus       215 ~~~--------~~~~------------------------~~~~~~-~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl  261 (307)
                      ...        ....                        ...... .......+..+.+++..|+ +.||.+||++.|++
T Consensus       249 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L-~~dP~~Rpt~~ell  327 (339)
T 1z57_A          249 ILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKML-EYDPAKRITLREAL  327 (339)
T ss_dssp             HHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHT-CSSTTTSCCHHHHT
T ss_pred             HhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHh-CcCcccccCHHHHh
Confidence            100        0000                        000000 0012234557899999999 99999999999997


Q ss_pred             H
Q 045092          262 S  262 (307)
Q Consensus       262 ~  262 (307)
                      +
T Consensus       328 ~  328 (339)
T 1z57_A          328 K  328 (339)
T ss_dssp             T
T ss_pred             c
Confidence            5

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.86  E-value=1.2e-21  Score=180.82  Aligned_cols=114  Identities=18%  Similarity=0.229  Sum_probs=94.0

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCC-CCC-----ccceeeeeecCCC
Q 045092           86 ATNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQ-HPN-----LVKLYRLCTETLK  158 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~n-----iv~l~g~~~~~~~  158 (307)
                      ..++|...+.||+|+||.||+|... +++.||||+++.. ......+.+|+.++..++ |+|     |+++++++.....
T Consensus        52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  130 (382)
T 2vx3_A           52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH  130 (382)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred             eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence            4678999999999999999999954 7889999999643 344567888999988884 554     8888877654210


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       131 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~  210 (382)
T 2vx3_A          131 LCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ  210 (382)
T ss_dssp             EEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred             eEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCcee
Confidence                                                                                            


Q ss_pred             ---------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCC
Q 045092          159 ---------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICR  200 (307)
Q Consensus       159 ---------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~  200 (307)
                               +|+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus       211 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  261 (382)
T 2vx3_A          211 LGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA  261 (382)
T ss_dssp             TTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             cccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence                     078899999999999999999999999999999999999643

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.85  E-value=9.8e-22  Score=178.39  Aligned_cols=164  Identities=13%  Similarity=0.103  Sum_probs=102.2

Q ss_pred             hcCcccCC-cccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHH-HHHhhCCCCCccceeeeeecCCCC----
Q 045092           87 TNNFASEN-EISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEI-GMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        87 t~~f~~~~-~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~-~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      .++|.+.+ .||+|+||.||+|... +++.||||++... .    ...+|+ ..+..+.|+||+++++++......    
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  101 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-P----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL  101 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-H----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-H----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence            67888854 6999999999999965 7899999998543 1    222333 345567999999999987541000    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~  181 (336)
T 3fhr_A          102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET  181 (336)
T ss_dssp             EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceec
Confidence                                                                                            


Q ss_pred             ----------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC
Q 045092          160 ----------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK  229 (307)
Q Consensus       160 ----------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  229 (307)
                                |+.|+|||.+..+.++.++||||||+++|+|++|+.||........   .......+....   ......
T Consensus       182 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~---~~~~~~  255 (336)
T 3fhr_A          182 TQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAI---SPGMKRRIRLGQ---YGFPNP  255 (336)
T ss_dssp             ----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------------CCCTT
T ss_pred             cccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhh---hhhHHHhhhccc---cccCch
Confidence                      7789999999888899999999999999999999999964332211   000011111100   011111


Q ss_pred             CchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          230 FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       230 l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ....++..+.+++..|+ +.||.+||++.++++
T Consensus       256 ~~~~~~~~~~~li~~~L-~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          256 EWSEVSEDAKQLIRLLL-KTDPTERLTITQFMN  287 (336)
T ss_dssp             TSTTCCHHHHHHHHHHS-CSSGGGSCCHHHHHH
T ss_pred             hhccCCHHHHHHHHHHC-CCChhHCcCHHHHhc
Confidence            12345668999999999 999999999999987

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.85  E-value=1.9e-21  Score=178.63  Aligned_cols=170  Identities=8%  Similarity=-0.074  Sum_probs=109.0

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCCh---hcHHHHHHHHHHHhhC--CCCCccceeeee-------
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSK---QGNREIVNEIGMISAL--QHPNLVKLYRLC-------  153 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l--~h~niv~l~g~~-------  153 (307)
                      ..+|...+.||+|+||.||+|... +++.||||++.....   ...+.+.+|+.++..+  +||||++++..+       
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence            445888999999999999999954 789999999976432   3345678885544444  699988744211       


Q ss_pred             ecCC---------------------------------------------C------------------------------
Q 045092          154 TETL---------------------------------------------K------------------------------  158 (307)
Q Consensus       154 ~~~~---------------------------------------------~------------------------------  158 (307)
                      ....                                             .                              
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDi  220 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHF  220 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcC
Confidence            1000                                             0                              


Q ss_pred             --------------------------------CCccccchhhhcc--CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccC
Q 045092          159 --------------------------------QPIVYMAPEYAKH--GYLTDKAEVCSFGIVTLEIESGRSNVICRTKED  204 (307)
Q Consensus       159 --------------------------------~t~~y~aPE~~~~--~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~  204 (307)
                                                      .|+.|+|||++.+  ..++.++|||||||++|||++|+.||.......
T Consensus       221 kp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~  300 (371)
T 3q60_A          221 TPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGI  300 (371)
T ss_dssp             SGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTC
T ss_pred             CHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCccc
Confidence                                            0788999999987  679999999999999999999999997543221


Q ss_pred             cccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          205 KFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       205 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ......     ..................++..+.+++..|+ +.||++||++.++++
T Consensus       301 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L-~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          301 KGSWKR-----PSLRVPGTDSLAFGSCTPLPDFVKTLIGRFL-NFDRRRRLLPLEAME  352 (371)
T ss_dssp             TTCCCB-----CCTTSCCCCSCCCTTSSCCCHHHHHHHHHHT-CSSTTTCCCHHHHTT
T ss_pred             ccchhh-----hhhhhccccccchhhccCCCHHHHHHHHHHc-CCChhhCCCHHHHhc
Confidence            100000     0000000000011111245668999999999 999999999999864

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.85  E-value=2.4e-21  Score=175.89  Aligned_cols=171  Identities=15%  Similarity=0.098  Sum_probs=120.1

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-CC-CEEEEEEccCCChhcHHHHHHHHHHHhhCCCCC------ccceeeeeecCC-
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-DG-KVIEVKQLSSKSKQGNREIVNEIGMISALQHPN------LVKLYRLCTETL-  157 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~~-~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~g~~~~~~-  157 (307)
                      .++|...+.||+|+||.||+|... ++ ..||||+++.. ....+.+.+|+.++.+++|+|      ++.+++++.... 
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~   96 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH   96 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence            468999999999999999999954 44 68999998643 344567889999999987665      787777654320 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          158 --------------------------------------------------------------------------------  157 (307)
Q Consensus       158 --------------------------------------------------------------------------------  157 (307)
                                                                                                      
T Consensus        97 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~  176 (355)
T 2eu9_A           97 MCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSV  176 (355)
T ss_dssp             EEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEE
T ss_pred             EEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccccccccccccccc
Confidence                                                                                            


Q ss_pred             -----------------------CCCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHH
Q 045092          158 -----------------------KQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGS  214 (307)
Q Consensus       158 -----------------------~~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~  214 (307)
                                             .+|+.|+|||.+.++.++.++|||||||++|||++|+.||.......   ....+..
T Consensus       177 ~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~~~~~~~  253 (355)
T 2eu9_A          177 KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE---HLVMMEK  253 (355)
T ss_dssp             SCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHH
T ss_pred             CCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHH
Confidence                                   00678999999999999999999999999999999999996433211   1111111


Q ss_pred             HHHh--------hhh--------------------h---cccccC--CCchhhHHHHHHHhccccCCCCCCCCCCHHHHH
Q 045092          215 YLKR--------ARK--------------------L---NGASCS--KFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVV  261 (307)
Q Consensus       215 ~~~~--------~~~--------------------~---~~~~~~--~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl  261 (307)
                      ....        ...                    .   ......  ......+..+.+++..|+ +.||.+|||+.+++
T Consensus       254 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L-~~dP~~Rpt~~e~l  332 (355)
T 2eu9_A          254 ILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRML-EFDPAQRITLAEAL  332 (355)
T ss_dssp             HHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHT-CSSTTTSCCHHHHT
T ss_pred             HcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHh-cCChhhCcCHHHHh
Confidence            1000        000                    0   000000  001123447889999999 99999999999997


Q ss_pred             H
Q 045092          262 S  262 (307)
Q Consensus       262 ~  262 (307)
                      +
T Consensus       333 ~  333 (355)
T 2eu9_A          333 L  333 (355)
T ss_dssp             T
T ss_pred             c
Confidence            4

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.84  E-value=9.7e-22  Score=192.32  Aligned_cols=168  Identities=17%  Similarity=0.229  Sum_probs=118.2

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeec------CCC
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTE------TLK  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~------~~~  158 (307)
                      .++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.++.+++||||+++++++..      ...
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~   92 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL   92 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence            36899999999999999999995 47899999998754 34445679999999999999999999988644      100


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~  172 (676)
T 3qa8_A           93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK  172 (676)
T ss_dssp             CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCC
T ss_pred             EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccccc
Confidence                                                                                            


Q ss_pred             ------------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhh---hhc
Q 045092          159 ------------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRAR---KLN  223 (307)
Q Consensus       159 ------------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~---~~~  223 (307)
                                  +|+.|+|||.+.++.++.++|||||||++|||++|+.||......     ..|.........   ...
T Consensus       173 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-----~~~~~~i~~~~~~~~~~~  247 (676)
T 3qa8_A          173 ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-----VQWHGKVREKSNEHIVVY  247 (676)
T ss_dssp             BTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH-----HHSSTTCC------CCSC
T ss_pred             ccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch-----hhhhhhhhcccchhhhhh
Confidence                        067899999999999999999999999999999999999642110     110000000000   000


Q ss_pred             c------------cccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHH
Q 045092          224 G------------ASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFV  260 (307)
Q Consensus       224 ~------------~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~v  260 (307)
                      .            .....+....+..+.+++..|+ ..||++||++.++
T Consensus       248 ~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL-~~DP~kRPTa~el  295 (676)
T 3qa8_A          248 DDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCML-MWHQRQRGTDPQN  295 (676)
T ss_dssp             CCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHS-CSSCC---CCTTC
T ss_pred             hhhccccccccccCCchhhchhhhHHHHHHHHHHc-cCCHhhCcCHHHH
Confidence            0            0011233446678999999999 9999999998764

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.83  E-value=7.8e-21  Score=174.16  Aligned_cols=164  Identities=9%  Similarity=0.057  Sum_probs=122.3

Q ss_pred             HHHHHhcCcccCCcccCCCCeeEEEEE------EcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCC---CCCccceeee
Q 045092           82 QIKAATNNFASENEISERGFGPVYRGL------LADGKVIEVKQLSSKSKQGNREIVNEIGMISALQ---HPNLVKLYRL  152 (307)
Q Consensus        82 el~~~t~~f~~~~~lG~G~~g~Vy~~~------~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~g~  152 (307)
                      ++....++|...+.||+|+||.||+|.      ..+++.||||++...   ...++.+|++++.+++   |+||++++++
T Consensus        59 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~  135 (365)
T 3e7e_A           59 EFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSA  135 (365)
T ss_dssp             EEECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEE
T ss_pred             eEEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhhee
Confidence            334456789999999999999999994      446889999999654   3457888888888886   9999999998


Q ss_pred             eecCCCC-------------------------------------------------------------------------
Q 045092          153 CTETLKQ-------------------------------------------------------------------------  159 (307)
Q Consensus       153 ~~~~~~~-------------------------------------------------------------------------  159 (307)
                      +......                                                                         
T Consensus       136 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~  215 (365)
T 3e7e_A          136 HLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDE  215 (365)
T ss_dssp             EECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC---
T ss_pred             eecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcccc
Confidence            7653100                                                                         


Q ss_pred             --------------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCccc
Q 045092          160 --------------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFY  207 (307)
Q Consensus       160 --------------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~  207 (307)
                                                      |+.|+|||++.+..++.++|||||||++|||++|+.||......... 
T Consensus       216 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~-  294 (365)
T 3e7e_A          216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK-  294 (365)
T ss_dssp             ---CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE-
T ss_pred             ccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee-
Confidence                                            88899999999999999999999999999999999998533221100 


Q ss_pred             HHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCC-CCHHHHHHHhccc
Q 045092          208 LLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNR-PLMSFVVSMLEDK  267 (307)
Q Consensus       208 l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~R-Ps~~~vl~~L~~~  267 (307)
                                    +.... +..  .....+.+++..|+ +.+|.+| |++.++.+.|+..
T Consensus       295 --------------~~~~~-~~~--~~~~~~~~~~~~~l-~~~p~~r~~~~~~l~~~l~~~  337 (365)
T 3e7e_A          295 --------------PEGLF-RRL--PHLDMWNEFFHVML-NIPDCHHLPSLDLLRQKLKKV  337 (365)
T ss_dssp             --------------ECSCC-TTC--SSHHHHHHHHHHHH-CCCCTTCCCCHHHHHHHHHHH
T ss_pred             --------------echhc-ccc--CcHHHHHHHHHHHc-CCCCCCcchHHHHHHHHHHHH
Confidence                          11111 111  12446778888899 9999988 5778777777654

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.83  E-value=6.8e-21  Score=188.52  Aligned_cols=157  Identities=17%  Similarity=0.236  Sum_probs=120.4

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc--CCCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLLA--DGKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~--~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      .++|.+.+.||+|+||.||+|...  +++.||||.+... .......+.+|+.++.+++||||+++++++.....     
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~  158 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV  158 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence            378999999999999999999964  6899999998654 33445678999999999999999999998765322     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus       159 ~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~~~  238 (681)
T 2pzi_A          159 GYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSFGYLY  238 (681)
T ss_dssp             EEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSCEEECCCTTCEETTCCSCCC
T ss_pred             eEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCCcEEEEecccchhcccCCccC
Confidence                                                                                            


Q ss_pred             CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHH
Q 045092          159 QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRT  238 (307)
Q Consensus       159 ~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  238 (307)
                      +|+.|+|||++.++. +.++|||||||+++||++|..|+.......                 +   .........+..+
T Consensus       239 gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~-----------------~---~~~~~~~~~~~~l  297 (681)
T 2pzi_A          239 GTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDG-----------------L---PEDDPVLKTYDSY  297 (681)
T ss_dssp             CCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSS-----------------C---CTTCHHHHHCHHH
T ss_pred             CCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccc-----------------c---cccccccccCHHH
Confidence            078999999987764 899999999999999999998875321111                 0   0000011223478


Q ss_pred             HHHhccccCCCCCCCCCC-HHHHHHHhc
Q 045092          239 SDGNDQCSSSVTPTNRPL-MSFVVSMLE  265 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RPs-~~~vl~~L~  265 (307)
                      .+++.+|+ +.||.+||+ ++++...|.
T Consensus       298 ~~li~~~l-~~dP~~R~~~~~~l~~~l~  324 (681)
T 2pzi_A          298 GRLLRRAI-DPDPRQRFTTAEEMSAQLT  324 (681)
T ss_dssp             HHHHHHHT-CSSGGGSCSSHHHHHHHHH
T ss_pred             HHHHhhhc-cCChhhCCCHHHHHHHHHH
Confidence            89999999 999999995 555555544

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.81  E-value=1.8e-20  Score=174.86  Aligned_cols=156  Identities=8%  Similarity=-0.051  Sum_probs=110.1

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCCh---hcHHHHHHHHHHHhhCCC-CCccceeee--------
Q 045092           86 ATNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSK---QGNREIVNEIGMISALQH-PNLVKLYRL--------  152 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~h-~niv~l~g~--------  152 (307)
                      .+.+|...+.||+|+||.||+|.. .+|+.||||++.....   ...+.|.+|+.++..++| .|...+..+        
T Consensus        76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~  155 (413)
T 3dzo_A           76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  155 (413)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred             CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence            345577889999999999999994 5799999999873322   235779999999999877 221111000        


Q ss_pred             -------------eec---------------------------------C------------------------------
Q 045092          153 -------------CTE---------------------------------T------------------------------  156 (307)
Q Consensus       153 -------------~~~---------------------------------~------------------------------  156 (307)
                                   +..                                 .                              
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHr  235 (413)
T 3dzo_A          156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT  235 (413)
T ss_dssp             EEECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             hcccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence                         000                                 0                              


Q ss_pred             --------------------------------CCCCccccchhhh----------ccCCCCchhHHHHHHHHHHHHHhCC
Q 045092          157 --------------------------------LKQPIVYMAPEYA----------KHGYLTDKAEVCSFGIVTLEIESGR  194 (307)
Q Consensus       157 --------------------------------~~~t~~y~aPE~~----------~~~~~~~~sDV~s~Gvvl~elltg~  194 (307)
                                                      .. .+.|+|||++          ....++.++|||||||++|||++|+
T Consensus       236 DiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~-g~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~  314 (413)
T 3dzo_A          236 YLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPI-GRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD  314 (413)
T ss_dssp             CCCGGGEEECTTCCEEECCGGGCEETTEEECCCC-CTTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSS
T ss_pred             CcccceEEEecCCeEEEEeccceeecCCccccCC-CCceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCC
Confidence                                            00 3689999998          5556888999999999999999999


Q ss_pred             CCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHH
Q 045092          195 SNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVV  261 (307)
Q Consensus       195 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl  261 (307)
                      .||........                ......  ....++..+.+++..|+ +.||.+||++.+++
T Consensus       315 ~Pf~~~~~~~~----------------~~~~~~--~~~~~~~~~~~li~~~l-~~dP~~Rpt~~~~l  362 (413)
T 3dzo_A          315 LPNTDDAALGG----------------SEWIFR--SCKNIPQPVRALLEGFL-RYPKEDRLLPLQAM  362 (413)
T ss_dssp             CCCCTTGGGSC----------------SGGGGS--SCCCCCHHHHHHHHHHT-CSSGGGSCCHHHHT
T ss_pred             CCCCCcchhhh----------------HHHHHh--hcccCCHHHHHHHHHHc-cCChhhCcCHHHHH
Confidence            99964432221                111111  01234568999999999 99999999987764

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.78  E-value=5.9e-19  Score=157.14  Aligned_cols=160  Identities=11%  Similarity=0.078  Sum_probs=107.2

Q ss_pred             hcCcccC-CcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHH-hhCCCCCccceeeeeec----CCC-
Q 045092           87 TNNFASE-NEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMI-SALQHPNLVKLYRLCTE----TLK-  158 (307)
Q Consensus        87 t~~f~~~-~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~g~~~~----~~~-  158 (307)
                      .++|... +.||+|+||.||++.. .+++.||||.+...     ..+.+|+.++ ..++|+||+++++++..    ... 
T Consensus        16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~   90 (299)
T 3m2w_A           16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL   90 (299)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence            4667776 7799999999999995 47899999998532     4577899888 55599999999998765    100 


Q ss_pred             ---------C--------------------------------------Cccccchh----------------------hh
Q 045092          159 ---------Q--------------------------------------PIVYMAPE----------------------YA  169 (307)
Q Consensus       159 ---------~--------------------------------------t~~y~aPE----------------------~~  169 (307)
                               .                                      ..+-+.|+                      ..
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~  170 (299)
T 3m2w_A           91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET  170 (299)
T ss_dssp             EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecccccccc
Confidence                     0                                      00001111                      12


Q ss_pred             ccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCc----hhhHHHHHHHhccc
Q 045092          170 KHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFG----FKFYRRTSDGNDQC  245 (307)
Q Consensus       170 ~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~l~~~C  245 (307)
                      .+..++.++|||||||++|||++|+.||.........          .............++    ..++..+.+++..|
T Consensus       171 ~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  240 (299)
T 3m2w_A          171 TGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----------PGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL  240 (299)
T ss_dssp             TTCGGGGHHHHHHHHHHHHHHHHSSCSCCC-----------------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHH
T ss_pred             ccccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh----------HHHHHHHhhccccCCchhcccCCHHHHHHHHHH
Confidence            2345678999999999999999999999543221100          000000000011111    23456899999999


Q ss_pred             cCCCCCCCCCCHHHHHH
Q 045092          246 SSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       246 ~~~~dP~~RPs~~~vl~  262 (307)
                      + +.||.+||++.++++
T Consensus       241 l-~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          241 L-KTEPTQRMTITEFMN  256 (299)
T ss_dssp             T-CSSTTTSCCHHHHHT
T ss_pred             c-ccChhhCCCHHHHhc
Confidence            9 999999999999986

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.66  E-value=2.4e-17  Score=149.08  Aligned_cols=65  Identities=22%  Similarity=0.353  Sum_probs=50.7

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCC--------hhcHHHHHHHHHHHhhCC---------CCCccce
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKS--------KQGNREIVNEIGMISALQ---------HPNLVKL  149 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~l  149 (307)
                      .++|...+.||+|+||.||+|.. +|+.||||++....        ....+.+.+|+.+++.++         |+||+++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            46788899999999999999997 68999999987542        223477899999998886         6666555


Q ss_pred             eee
Q 045092          150 YRL  152 (307)
Q Consensus       150 ~g~  152 (307)
                      .+.
T Consensus        98 ~~~  100 (336)
T 2vuw_A           98 NSV  100 (336)
T ss_dssp             EEE
T ss_pred             cce
Confidence            443

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=98.86  E-value=2.2e-09  Score=103.17  Aligned_cols=106  Identities=8%  Similarity=-0.024  Sum_probs=73.5

Q ss_pred             ccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChh--------cHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           91 ASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQ--------GNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        91 ~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      ...+.||+|+||.||+|.. .+..+|+|+.......        ..+.+.+|++++.+++|+||+++..++......   
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV  417 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM  417 (540)
T ss_dssp             ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred             CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence            3457899999999999964 5788999986532211        134589999999999999999444333322100   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       418 mE~~~ggsL~~~l~~~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~  497 (540)
T 3en9_A          418 MSYINGKLAKDVIEDNLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDKDLYIIDFGLGKISNLDEDKAVDLIVFKKAVL  497 (540)
T ss_dssp             EECCCSEEHHHHSTTCTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESSSEEECCCTTCEECCCHHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECCeEEEEECccCEECCCccccccchhhhhhhhc
Confidence                                                                                            


Q ss_pred             -Cccccchhhhcc--CCCCchhHHHHHHHHHHHHHhCCCCC
Q 045092          160 -PIVYMAPEYAKH--GYLTDKAEVCSFGIVTLEIESGRSNV  197 (307)
Q Consensus       160 -t~~y~aPE~~~~--~~~~~~sDV~s~Gvvl~elltg~~p~  197 (307)
                       |+.|||||++..  ..|+..+|+|+..+-.++.+.++.+|
T Consensus       498 GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          498 STHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             CCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence             789999999886  56788899999999999998888776

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=98.57  E-value=6.6e-09  Score=100.49  Aligned_cols=101  Identities=11%  Similarity=-0.050  Sum_probs=56.0

Q ss_pred             cccCCCCeeEEEEE-EcCCCEEEEEEccCCC----------hhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCCC---
Q 045092           95 EISERGFGPVYRGL-LADGKVIEVKQLSSKS----------KQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        95 ~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~----------~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~---  159 (307)
                      .++.|++|.++.++ .-.|+.+|||.+....          ....++|.+|+++|+++ .|+||+++++++.+....   
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV  320 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV  320 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence            45666666666555 3358889999986431          22346799999999999 799999999999876211   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       321 MEyv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~t~v  400 (569)
T 4azs_A          321 MEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLV  400 (569)
T ss_dssp             EECCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCSHHHH
T ss_pred             EecCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCccccCce
Confidence                                                                                            


Q ss_pred             -CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCC
Q 045092          160 -PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSN  196 (307)
Q Consensus       160 -t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p  196 (307)
                       |+.|||||++. |.+..++|+||+|++++++.++..+
T Consensus       401 GTp~YmAPE~l~-g~~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          401 QSFFVFVNELFA-ENKSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             HHHHHHHHHHC------------------CCCCTTHHH
T ss_pred             echhhccHHHhC-CCCCCcccccccccchhhhccccch
Confidence             88999999886 4577889999999988877665443

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.24  E-value=1e-06  Score=77.47  Aligned_cols=86  Identities=14%  Similarity=-0.015  Sum_probs=63.0

Q ss_pred             HHHHHhcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCCh------------------hcHHHHHHHHHHHhhCCC
Q 045092           82 QIKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSK------------------QGNREIVNEIGMISALQH  143 (307)
Q Consensus        82 el~~~t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~------------------~~~~~~~~E~~~l~~l~h  143 (307)
                      .+......|...+.||+|+||.||+|...+|+.||||.++....                  .....+.+|+.++.+++ 
T Consensus        84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-  162 (282)
T 1zar_A           84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-  162 (282)
T ss_dssp             HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred             HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence            44444455777799999999999999987789999999864321                  12456899999999998 


Q ss_pred             CCccceeeeeecCCCCCccccchhhhccCCC
Q 045092          144 PNLVKLYRLCTETLKQPIVYMAPEYAKHGYL  174 (307)
Q Consensus       144 ~niv~l~g~~~~~~~~t~~y~aPE~~~~~~~  174 (307)
                       | +++++++..    ...|+..|++.++.+
T Consensus       163 -~-~~v~~~~~~----~~~~lvmE~~~g~~L  187 (282)
T 1zar_A          163 -G-LAVPKVYAW----EGNAVLMELIDAKEL  187 (282)
T ss_dssp             -T-SSSCCEEEE----ETTEEEEECCCCEEG
T ss_pred             -C-CCcCeEEec----cceEEEEEecCCCcH
Confidence             5 667665543    235888888876543

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=97.67  E-value=1.9e-05  Score=68.23  Aligned_cols=74  Identities=16%  Similarity=0.050  Sum_probs=52.8

Q ss_pred             cccCCcccCCCCeeEEEEEE-cCCCE--EEEEEccCCChh------------------------cHHHHHHHHHHHhhCC
Q 045092           90 FASENEISERGFGPVYRGLL-ADGKV--IEVKQLSSKSKQ------------------------GNREIVNEIGMISALQ  142 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~-~~~~~--vAvK~~~~~~~~------------------------~~~~~~~E~~~l~~l~  142 (307)
                      |...+.||+|+||.||+|.. .+|+.  ||||+++.....                        ....+.+|+.+|.+++
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            56778999999999999996 68888  999987543111                        1136889999999998


Q ss_pred             CCCc--cceeeeeecCCCCCccccchhhhc
Q 045092          143 HPNL--VKLYRLCTETLKQPIVYMAPEYAK  170 (307)
Q Consensus       143 h~ni--v~l~g~~~~~~~~t~~y~aPE~~~  170 (307)
                      |+|+  ..++++       ...|+..|++.
T Consensus       129 ~~~i~~p~~~~~-------~~~~lVmE~~g  151 (258)
T 1zth_A          129 EAGVSVPQPYTY-------MKNVLLMEFIG  151 (258)
T ss_dssp             HTTCCCCCEEEE-------ETTEEEEECCE
T ss_pred             hCCCCCCeEEEc-------CCCEEEEEecC
Confidence            8754  444432       13567777773

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=97.09  E-value=0.00019  Score=65.74  Aligned_cols=33  Identities=12%  Similarity=-0.022  Sum_probs=30.3

Q ss_pred             cccCCcccCCCCeeEEEEEEcCCCEEEEEEccC
Q 045092           90 FASENEISERGFGPVYRGLLADGKVIEVKQLSS  122 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~  122 (307)
                      |.+...||+|+||.||+|...+|+.||||+++.
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~  129 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRL  129 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECTTCCEEEEEEECT
T ss_pred             EEecCEeeeCCceEEEEEECCCCCEEEEEEEec
Confidence            889999999999999999988899999998753

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=95.54  E-value=0.016  Score=49.24  Aligned_cols=87  Identities=13%  Similarity=0.075  Sum_probs=64.2

Q ss_pred             HHHHhcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCCCCc
Q 045092           83 IKAATNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLKQPI  161 (307)
Q Consensus        83 l~~~t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~t~  161 (307)
                      +.....+|.....++.|+.+.||+.... +..+++|............+.+|+.++..+ .|.++.++++++...   ..
T Consensus         9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~---~~   84 (263)
T 3tm0_A            9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHD---GW   84 (263)
T ss_dssp             HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEET---TE
T ss_pred             HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecC---Cc
Confidence            3445678888888999999999999854 688999998643222234688999999988 467888999888754   33


Q ss_pred             cccchhhhccCC
Q 045092          162 VYMAPEYAKHGY  173 (307)
Q Consensus       162 ~y~aPE~~~~~~  173 (307)
                      .|+..|++.+..
T Consensus        85 ~~lv~e~i~G~~   96 (263)
T 3tm0_A           85 SNLLMSEADGVL   96 (263)
T ss_dssp             EEEEEECCSSEE
T ss_pred             eEEEEEecCCee
Confidence            577778776543

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=93.29  E-value=0.072  Score=44.68  Aligned_cols=82  Identities=16%  Similarity=0.033  Sum_probs=54.8

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCC--ccceeeeeecCCCCCcccc
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPN--LVKLYRLCTETLKQPIVYM  164 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~g~~~~~~~~t~~y~  164 (307)
                      ..++......+.|..+.||+....+|..+++|.....   ....+.+|+.++..+.+.+  +.+++++.....   ..|+
T Consensus        19 ~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~---~~~~   92 (264)
T 1nd4_A           19 LFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAG---RDWL   92 (264)
T ss_dssp             TTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSS---CEEE
T ss_pred             cCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCC---CCEE
Confidence            3445543333456669999998767788999987543   2245788999999885434  556888766532   2577


Q ss_pred             chhhhccCCC
Q 045092          165 APEYAKHGYL  174 (307)
Q Consensus       165 aPE~~~~~~~  174 (307)
                      .-|++.+..+
T Consensus        93 v~e~i~G~~l  102 (264)
T 1nd4_A           93 LLGEVPGQDL  102 (264)
T ss_dssp             EEECCSSEET
T ss_pred             EEEecCCccc
Confidence            7787766544

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=93.16  E-value=0.011  Score=55.34  Aligned_cols=61  Identities=11%  Similarity=0.093  Sum_probs=18.5

Q ss_pred             CCcccCCCCeeEEEEEEcC-CCEEEE------EEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecC
Q 045092           93 ENEISERGFGPVYRGLLAD-GKVIEV------KQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTET  156 (307)
Q Consensus        93 ~~~lG~G~~g~Vy~~~~~~-~~~vAv------K~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~  156 (307)
                      .+.||   ||.||+|.+.. ..+|||      |..+..  ..+....|.+|..++..++|+|+++.+++....
T Consensus       147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~~  216 (463)
T 3cxl_A          147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVHT  216 (463)
T ss_dssp             TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEEC
T ss_pred             cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEee
Confidence            45666   99999999753 467888      766542  223345788999999999999999998876543

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=90.68  E-value=0.66  Score=39.79  Aligned_cols=95  Identities=19%  Similarity=0.085  Sum_probs=66.0

Q ss_pred             cccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCC---CCccceeeeeecCCCCCccccch
Q 045092           90 FASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQH---PNLVKLYRLCTETLKQPIVYMAP  166 (307)
Q Consensus        90 f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~g~~~~~~~~t~~y~aP  166 (307)
                      ......+|.|..+.||+....+|+.|.+|+...........|..|+..|+.+.-   --+.+++++..       .|+.-
T Consensus        17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~~-------~~lv~   89 (288)
T 3f7w_A           17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWDD-------RTLAM   89 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEET-------TEEEE
T ss_pred             eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEeccC-------ceEEE
Confidence            445677899999999999999999999998765444444568899999988842   23455555432       35555


Q ss_pred             hhhccCCCCchhHHHHHHHHHHHHHh
Q 045092          167 EYAKHGYLTDKAEVCSFGIVTLEIES  192 (307)
Q Consensus       167 E~~~~~~~~~~sDV~s~Gvvl~ellt  192 (307)
                      |++..+..+ ......||-.+..|-.
T Consensus        90 e~l~~~~~~-~~~~~~lg~~La~lH~  114 (288)
T 3f7w_A           90 EWVDERPPT-PEAAERFGHQLAAMHL  114 (288)
T ss_dssp             ECCCCCCCC-HHHHHHHHHHHHHHHH
T ss_pred             EeecccCCC-hHHHHHHHHHHHhhhh
Confidence            766654433 3345578888877765

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=88.67  E-value=0.89  Score=40.26  Aligned_cols=100  Identities=16%  Similarity=0.223  Sum_probs=64.0

Q ss_pred             cCCcccCCCCeeEEEEEEcCCCEEEEEEcc--CCC-hhcHHHHHHHHHHHhhCC--CCCccceeeeeecCCCCCccccch
Q 045092           92 SENEISERGFGPVYRGLLADGKVIEVKQLS--SKS-KQGNREIVNEIGMISALQ--HPNLVKLYRLCTETLKQPIVYMAP  166 (307)
Q Consensus        92 ~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~g~~~~~~~~t~~y~aP  166 (307)
                      ..+.|+.|.++.||+.... +..+++|+..  ... ......+.+|+.++..+.  +..+.++++++.+....-..|+..
T Consensus        42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm  120 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM  120 (359)
T ss_dssp             EEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred             eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence            3567899999999998865 4678888775  322 122346888999999986  456889999887653323357777


Q ss_pred             hhhccCCCCc-------hh----HHHHHHHHHHHHHh
Q 045092          167 EYAKHGYLTD-------KA----EVCSFGIVTLEIES  192 (307)
Q Consensus       167 E~~~~~~~~~-------~s----DV~s~Gvvl~ellt  192 (307)
                      |++.+..+..       ..    -...+|-.|..|=.
T Consensus       121 e~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~  157 (359)
T 3dxp_A          121 EFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHT  157 (359)
T ss_dssp             ECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhC
Confidence            8887655421       11    14566666666655

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=84.77  E-value=0.045  Score=48.23  Aligned_cols=37  Identities=24%  Similarity=0.307  Sum_probs=28.6

Q ss_pred             CCHHHHHHH-----hcccccccccCeeeeeeeccCCceeecC
Q 045092          255 PLMSFVVSM-----LEDKAEVCSFGIVTLEIESGRSNVICRT  291 (307)
Q Consensus       255 Ps~~~vl~~-----L~~~~~v~~~g~~~~e~~t~~~~~~~~~  291 (307)
                      ..+-|++..     +...+||||||++++|++||+.|+...+
T Consensus       200 ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~  241 (307)
T 3omv_A          200 WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN  241 (307)
T ss_dssp             SCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             ccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCC
Confidence            345577652     4557899999999999999999986533

>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}

Probab=84.54  E-value=0.068  Score=50.12  Aligned_cols=32  Identities=13%  Similarity=0.049  Sum_probs=26.0

Q ss_pred             hcHHHHHHHHHHHhhCCCCCccceeeeeecCC
Q 045092          126 QGNREIVNEIGMISALQHPNLVKLYRLCTETL  157 (307)
Q Consensus       126 ~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~  157 (307)
                      +..++|.+|++.+++++|+|+|+++|||....
T Consensus       321 ~g~~eF~~Eve~L~~i~HrNLV~L~gyC~s~~  352 (487)
T 3oja_A          321 QGSETERLECERENQARQREIDALKEQYRTVI  352 (487)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred             ccHHHHHHHHHHHhcccccchhhHHHHhcChH
Confidence            34568999999999999999999999997654

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=82.70  E-value=0.11  Score=46.25  Aligned_cols=27  Identities=4%  Similarity=-0.069  Sum_probs=23.0

Q ss_pred             hcccccccccCeeeeeeeccCCceeec
Q 045092          264 LEDKAEVCSFGIVTLEIESGRSNVICR  290 (307)
Q Consensus       264 L~~~~~v~~~g~~~~e~~t~~~~~~~~  290 (307)
                      .....|+|++|++++|+++|+.|+...
T Consensus       262 ~~~~~DiwslG~il~elltg~~pf~~~  288 (365)
T 3e7e_A          262 WNYQIDYFGVAATVYCMLFGTYMKVKN  288 (365)
T ss_dssp             BSTHHHHHHHHHHHHHHHHSSCCCEEE
T ss_pred             CCccccHHHHHHHHHHHHhCCCccccC
Confidence            455679999999999999999997553

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=80.60  E-value=4.5  Score=35.33  Aligned_cols=92  Identities=9%  Similarity=0.048  Sum_probs=68.5

Q ss_pred             CCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCC---CCCccceeeeeecCCCCCccccchhhh
Q 045092           93 ENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQ---HPNLVKLYRLCTETLKQPIVYMAPEYA  169 (307)
Q Consensus        93 ~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~~~t~~y~aPE~~  169 (307)
                      .+.|+.|....+|+... ++..+++|.....   ....|..|+..|..+.   ...+.+.++++...   ...|+.-|++
T Consensus        41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~---g~~~lvme~l  113 (312)
T 3jr1_A           41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQ---GHSFLLLEAL  113 (312)
T ss_dssp             EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECS---SEEEEEEECC
T ss_pred             eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecC---CceEEEEEec
Confidence            45789999999999885 4678888986432   3567889999998883   35688888877653   2468888888


Q ss_pred             ccCCCCchhHHHHHHHHHHHHHh
Q 045092          170 KHGYLTDKAEVCSFGIVTLEIES  192 (307)
Q Consensus       170 ~~~~~~~~sDV~s~Gvvl~ellt  192 (307)
                      .+...+. .....+|-.|..|=.
T Consensus       114 ~G~~~~~-~~~~~lG~~LA~LH~  135 (312)
T 3jr1_A          114 NKSKNKQ-SSFTIFAEKIAQLHQ  135 (312)
T ss_dssp             CCCCCCT-THHHHHHHHHHHHHH
T ss_pred             cCCCCCc-hhHHHHHHHHHHHHc
Confidence            8766543 467889999888766

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	307
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	5e-15
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-04
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	6e-15
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-06
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-14
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-06
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	4e-14
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-05
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-13
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-05
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	3e-13
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	0.003
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	4e-13
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	9e-13
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	8e-04
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-12
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-12
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-04
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	6e-12
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-06
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	8e-12
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	7e-06
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	9e-12
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-11
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	7e-07
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-11
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-11
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-05
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-11
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	3e-11
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	0.001
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-11
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-04
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	4e-11
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-11
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-04
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	4e-11
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	7e-11
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-10
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	3e-10
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-10
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	4e-10
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-05
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	4e-10
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	5e-04
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	4e-10
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	5e-10
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	5e-10
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-09
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	0.002
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-09
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-04
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-09
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	0.001
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-09
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	0.004
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-09
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	7e-09
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-05
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	7e-09
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	0.002
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	7e-09
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-05
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-08
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-08
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	7e-06
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-08
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-08
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	4e-08
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	5e-08
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	8e-08
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	9e-08
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	0.001
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-07
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-07
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-07
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-07
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-07
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	7e-04
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	5e-07
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	5e-07
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	8e-07
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	7e-04
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	9e-07
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-06
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-06
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	0.001
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-05
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	3e-05
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	7e-05
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-04

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.3 bits (174), Expect = 5e-15
 Identities = 37/205 (18%), Positives = 68/205 (33%), Gaps = 26/205 (12%)

Query: 88  NNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLV 147
            +     E+    FG V  G       + +K +  +      E + E  ++  L H  LV
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLV 62

Query: 148 KLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES------------GRS 195
           +LY +CT+   Q  +++  EY  +G L +          T ++                 
Sbjct: 63  QLYGVCTK---QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 119

Query: 196 NVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRP 255
             + R    +  L++  G              S FG   Y    +      S       P
Sbjct: 120 QFLHRDLAARNCLVNDQGV----------VKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 169

Query: 256 LMSFVVSMLEDKAEVCSFGIVTLEI 280
               + S    K+++ +FG++  EI
Sbjct: 170 PEVLMYSKFSSKSDIWAFGVLMWEI 194

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (94), Expect = 1e-04
 Identities = 17/113 (15%), Positives = 38/113 (33%), Gaps = 13/113 (11%)

Query: 154 TETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLG 213
           +   K P+ +  PE   +   + K+++ +FG++  EI S       +   ++F   +   
Sbjct: 158 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG-----KMPYERFTNSETAE 212

Query: 214 SYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED 266
              +  R       S+  +                     RP    ++S + D
Sbjct: 213 HIAQGLRLYRPHLASEKVYTIMYSCWHEK--------ADERPTFKILLSNILD 257

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.2 bits (174), Expect = 6e-15
 Identities = 32/213 (15%), Positives = 71/213 (33%), Gaps = 30/213 (14%)

Query: 88  NNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLV 147
                   I    FG VY+G       +++  +++ + Q  +   NE+G++   +H N++
Sbjct: 8   GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67

Query: 148 KLYRLCTETLKQPIVYMAPEYAKHGYLTD-------KAEVCSFGIVTLEIESG-----RS 195
                 T     P + +  ++ +   L         K E+     +  +   G       
Sbjct: 68  LFMGYSTA----PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 123

Query: 196 NVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSV-TPTNR 254
           ++I R  +     L    +               FG    +    G+ Q      +    
Sbjct: 124 SIIHRDLKSNNIFLHEDLT----------VKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173

Query: 255 P---LMSFVVSMLEDKAEVCSFGIVTLEIESGR 284
               +     +    +++V +FGIV  E+ +G+
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (109), Expect = 2e-06
 Identities = 24/115 (20%), Positives = 45/115 (39%), Gaps = 12/115 (10%)

Query: 154 TETLKQPIVYMAPEYAKH---GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLD 210
            E L   I++MAPE  +       + +++V +FGIV  E+ +G+         D+   + 
Sbjct: 163 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222

Query: 211 WLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLE 265
             G       K+  ++C K   +           C        RPL   +++ +E
Sbjct: 223 GRGYLSPDLSKVR-SNCPKAMKRLMAE-------C-LKKKRDERPLFPQILASIE 268

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.1 bits (171), Expect = 1e-14
 Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 4/89 (4%)

Query: 88  NNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLV 147
           +      EI    FG V+ G   +   + +K +  +      + + E  ++  L HP LV
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLV 63

Query: 148 KLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
           +LY +C E   Q  + +  E+ +HG L+D
Sbjct: 64  QLYGVCLE---QAPICLVFEFMEHGCLSD 89

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.8 bits (108), Expect = 2e-06
 Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 13/117 (11%)

Query: 153 CTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWL 212
            +   K P+ + +PE       + K++V SFG++  E+ S            +       
Sbjct: 158 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST 217

Query: 213 GSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE 269
           G  L + R       S   ++                 P +RP  S ++  L + AE
Sbjct: 218 GFRLYKPRL-----ASTHVYQIMNHCWKER--------PEDRPAFSRLLRQLAEIAE 261

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.9 bits (168), Expect = 4e-14
 Identities = 39/203 (19%), Positives = 74/203 (36%), Gaps = 14/203 (6%)

Query: 88  NNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLV 147
                   +    FG V+ G       + VK L  +        + E  ++  LQH  LV
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV 71

Query: 148 KLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFY 207
           +LY + T+      +Y+  EY ++G L D  +  S   +T    +   ++  +  E   +
Sbjct: 72  RLYAVVTQ----EPIYIITEYMENGSLVDFLKTPSGIKLT---INKLLDMAAQIAEGMAF 124

Query: 208 L--LDWLGSYLKRAR-KLNGASCSKFG-FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM 263
           +   +++   L+ A   ++     K   F   R   D             +      ++ 
Sbjct: 125 IEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY 184

Query: 264 LED--KAEVCSFGIVTLEIESGR 284
                K++V SFGI+  EI +  
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHG 207

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 1e-05
 Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 13/114 (11%)

Query: 153 CTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWL 212
             E  K PI + APE   +G  T K++V SFGI+  EI +       R         + +
Sbjct: 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG-----RIPYPGMTNPEVI 220

Query: 213 GSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED 266
            +  +  R +   +C +  ++  R              P +RP   ++ S+LED
Sbjct: 221 QNLERGYRMVRPDNCPEELYQLMRLCWKER--------PEDRPTFDYLRSVLED 266

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.7 bits (162), Expect = 3e-13
 Identities = 35/203 (17%), Positives = 77/203 (37%), Gaps = 14/203 (6%)

Query: 88  NNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLV 147
            +   E ++ +  FG V+ G       + +K L           + E  ++  L+H  LV
Sbjct: 17  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLV 75

Query: 148 KLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFY 207
           +LY + +    +  +Y+  EY   G L D  +  +   + L       ++  +      Y
Sbjct: 76  QLYAVVS----EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQ---LVDMAAQIASGMAY 128

Query: 208 L--LDWLGSYLKRARKLNGASC----SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVV 261
           +  ++++   L+ A  L G +     + FG       ++   +  +          + + 
Sbjct: 129 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 188

Query: 262 SMLEDKAEVCSFGIVTLEIESGR 284
                K++V SFGI+  E+ +  
Sbjct: 189 GRFTIKSDVWSFGILLTELTTKG 211

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (100), Expect = 2e-05
 Identities = 26/113 (23%), Positives = 41/113 (36%), Gaps = 13/113 (11%)

Query: 154 TETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLG 213
            +  K PI + APE A +G  T K++V SFGI+  E+ +       R         + L 
Sbjct: 171 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG-----RVPYPGMVNREVLD 225

Query: 214 SYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED 266
              +  R      C +       +             P  RP   ++ + LED
Sbjct: 226 QVERGYRMPCPPECPESLHDLMCQCWRKE--------PEERPTFEYLQAFLED 270

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 66.7 bits (162), Expect = 3e-13
 Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 17/111 (15%)

Query: 78  FHLRQIKAATNNFASE---------NEISERGFGPVYRGLLA----DGKVIEVKQL-SSK 123
           F       A   FA E           I    FG V  G L         + +K L S  
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 124 SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYL 174
           +++  R+ ++E  ++    HPN++ L  + T+      V +  E+ ++G L
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTK---STPVMIITEFMENGSL 114

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.3 bits (83), Expect = 0.003
 Identities = 22/108 (20%), Positives = 39/108 (36%), Gaps = 15/108 (13%)

Query: 160 PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKR 218
           PI + APE  ++   T  ++V S+GIV  E+ S G       T +D    ++      + 
Sbjct: 196 PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE------QD 249

Query: 219 ARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED 266
            R      C     +        +          +RP    +V+ L+ 
Sbjct: 250 YRLPPPMDCPSALHQLMLDCWQKD--------RNHRPKFGQIVNTLDK 289

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.2 bits (161), Expect = 4e-13
 Identities = 45/220 (20%), Positives = 80/220 (36%), Gaps = 30/220 (13%)

Query: 80  LRQIKAA---TNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEI 135
           LR I +       +    +I +   G VY  + +A G+ + ++Q++ + +     I+NEI
Sbjct: 9   LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68

Query: 136 GMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFG-----IVTLEI 190
            ++   ++PN+V              +++  EY   G LTD              V  E 
Sbjct: 69  LVMRENKNPNIVNYLDSYLV---GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCREC 125

Query: 191 ESG-----RSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQC 245
                    + VI R  +    LL   GS +K              F F  + +    + 
Sbjct: 126 LQALEFLHSNQVIHRDIKSDNILLGMDGS-VKLT-----------DFGFCAQITPEQSKR 173

Query: 246 SSSV-TPTNRPLMSFVVSMLEDKAEVCSFGIVTLEIESGR 284
           S+ V TP               K ++ S GI+ +E+  G 
Sbjct: 174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 65.1 bits (158), Expect = 9e-13
 Identities = 39/202 (19%), Positives = 77/202 (38%), Gaps = 10/202 (4%)

Query: 88  NNFASENEISERGFGPVYRGLLAD-GKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNL 146
            +   ++++    +G VY G+       + VK L   + +   E + E  ++  ++HPNL
Sbjct: 17  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNL 75

Query: 147 VKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKF 206
           V+L  +CT    +P  Y+  E+  +G L D    C+   V+  +    +  I    E   
Sbjct: 76  VQLLGVCTR---EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY-L 131

Query: 207 YLLDWLGSYLKRARKLNGASC----SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS 262
              +++   L     L G +     + FG               +          S   +
Sbjct: 132 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 191

Query: 263 MLEDKAEVCSFGIVTLEIESGR 284
               K++V +FG++  EI +  
Sbjct: 192 KFSIKSDVWAFGVLLWEIATYG 213

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.2 bits (88), Expect = 8e-04
 Identities = 23/109 (21%), Positives = 41/109 (37%), Gaps = 13/109 (11%)

Query: 158 KQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLK 217
           K PI + APE   +   + K++V +FG++  EI +   +        + Y L       K
Sbjct: 177 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK 231

Query: 218 RARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED 266
             R      C +  ++  R     N        P++RP  + +    E 
Sbjct: 232 DYRMERPEGCPEKVYELMRACWQWN--------PSDRPSFAEIHQAFET 272

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.8 bits (157), Expect = 1e-12
 Identities = 34/205 (16%), Positives = 61/205 (29%), Gaps = 31/205 (15%)

Query: 93  ENEISERGFGPVYRGLLAD----GKVIEVKQLSSKSKQGNRE-IVNEIGMISALQHPNLV 147
              I E  FG V++G+          + +K   + +    RE  + E   +    HP++V
Sbjct: 12  GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 71

Query: 148 KLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGI-------VTLEIESG-----RS 195
           KL  + TE      V++  E    G L    +V  + +          ++ +        
Sbjct: 72  KLIGVITE----NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK 127

Query: 196 NVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRP 255
             + R    +  L+                    FG   Y   S         +      
Sbjct: 128 RFVHRDIAARNVLVSSND----------CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 177

Query: 256 LMSFVVSMLEDKAEVCSFGIVTLEI 280
             S         ++V  FG+   EI
Sbjct: 178 PESINFRRFTSASDVWMFGVCMWEI 202

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.1 bits (158), Expect = 1e-12
 Identities = 17/93 (18%), Positives = 34/93 (36%), Gaps = 5/93 (5%)

Query: 86  ATNNFASENEISERGFGPVYRG-LLADGKVIEVKQLSSKSKQGNRE-IVNEIGMISALQH 143
             ++F   +E+     G V++      G V+  K +  + K   R  I+ E+ ++     
Sbjct: 4   KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS 63

Query: 144 PNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
           P +V  Y           + +  E+   G L  
Sbjct: 64  PYIVGFYGAFYS---DGEISICMEHMDGGSLDQ 93

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (94), Expect = 2e-04
 Identities = 9/41 (21%), Positives = 21/41 (51%)

Query: 154 TETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGR 194
             +      YM+PE  +  + + ++++ S G+  +E+  GR
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.3 bits (151), Expect = 6e-12
 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 5/89 (5%)

Query: 88  NNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLV 147
                   I +  FG V  G    G  + VK + + +    +  + E  +++ L+H NLV
Sbjct: 7   KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 63

Query: 148 KLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
           +L  +  E   +  +Y+  EY   G L D
Sbjct: 64  QLLGVIVEE--KGGLYIVTEYMAKGSLVD 90

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (106), Expect = 4e-06
 Identities = 24/113 (21%), Positives = 40/113 (35%), Gaps = 13/113 (11%)

Query: 154 TETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLG 213
            +T K P+ + APE  +    + K++V SFGI+  EI S       R    +  L D + 
Sbjct: 157 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG-----RVPYPRIPLKDVVP 211

Query: 214 SYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED 266
              K  +      C    ++  +     +           RP    +   LE 
Sbjct: 212 RVEKGYKMDAPDGCPPAVYEVMKNCWHLD--------AAMRPSFLQLREQLEH 256

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.6 bits (151), Expect = 8e-12
 Identities = 37/217 (17%), Positives = 72/217 (33%), Gaps = 32/217 (14%)

Query: 93  ENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRL 152
           +  I +  FG V+RG    G+ + VK  SS+ ++ +     EI     L+H N++     
Sbjct: 8   QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAA 65

Query: 153 CTETLKQPI-VYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDW 211
             +       +++  +Y +HG L D     +          G   +   T     +L   
Sbjct: 66  DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTV------TVEGMIKLALSTASGLAHLHME 119

Query: 212 LGSYLKRA----RKLNGASC----------SKFGF-KFYRRTSDGNDQCSSSVTPTNR-- 254
           +     +     R L   +           +  G    +   +D  D   +    T R  
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 179

Query: 255 ------PLMSFVVSMLEDKAEVCSFGIVTLEIESGRS 285
                   ++        +A++ + G+V  EI    S
Sbjct: 180 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCS 216

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.4 bits (104), Expect = 7e-06
 Identities = 20/129 (15%), Positives = 37/129 (28%), Gaps = 13/129 (10%)

Query: 150 YRLCTETLKQPIVYMAPEY------AKHGYLTDKAEVCSFGIVTLEIESGRSNV-ICRTK 202
             +          YMAPE        KH     +A++ + G+V  EI    S   I    
Sbjct: 165 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY 224

Query: 203 EDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSS------SVTPTNRPL 256
           +  +Y L      ++  RK+      +       ++ +     +             R  
Sbjct: 225 QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT 284

Query: 257 MSFVVSMLE 265
              +   L 
Sbjct: 285 ALRIKKTLS 293

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 62.8 bits (152), Expect = 9e-12
 Identities = 28/203 (13%), Positives = 69/203 (33%), Gaps = 26/203 (12%)

Query: 95  EISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLC 153
           E+    FG V+R +  A G+V   K +++        + NEI +++ L HP L+ L+   
Sbjct: 36  ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 95

Query: 154 TETLKQPIVYMAPEYAKHGYLTDKAEVCSFGI-------VTLEIESG-----RSNVICRT 201
            +   +  + +  E+   G L D+     + +          +   G       +++   
Sbjct: 96  ED---KYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLD 152

Query: 202 KEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVV 261
            + +  + +              +S     F    + +       ++ T           
Sbjct: 153 IKPENIMCE----------TKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDR 202

Query: 262 SMLEDKAEVCSFGIVTLEIESGR 284
             +    ++ + G++   + SG 
Sbjct: 203 EPVGFYTDMWAIGVLGYVLLSGL 225

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.7 bits (149), Expect = 1e-11
 Identities = 39/213 (18%), Positives = 75/213 (35%), Gaps = 28/213 (13%)

Query: 89  NFASENEISERGFGPVYRGLLADGK----VIEVKQLSSKSKQGN-REIVNEIGMISALQH 143
           +F     I    FG VY G L D         VK L+  +  G   + + E  ++    H
Sbjct: 30  HF--NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 87

Query: 144 PNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEI------------E 191
           PN++ L  +C  +   P+V +   Y KHG L +     +      ++             
Sbjct: 88  PNVLSLLGICLRSEGSPLVVL--PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKF 145

Query: 192 SGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTP 251
                 + R    +  +LD      K   K+     ++    + +     +++  + +  
Sbjct: 146 LASKKFVHRDLAARNCMLDE-----KFTVKVADFGLAR--DMYDKEFDSVHNKTGAKLPV 198

Query: 252 TNRPLMSFVVSMLEDKAEVCSFGIVTLEIESGR 284
               L S        K++V SFG++  E+ +  
Sbjct: 199 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 231

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 7e-07
 Identities = 22/114 (19%), Positives = 37/114 (32%), Gaps = 13/114 (11%)

Query: 153 CTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWL 212
                K P+ +MA E  +    T K++V SFG++  E+ +                 D  
Sbjct: 190 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG-----APPYPDVNTFDIT 244

Query: 213 GSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED 266
              L+  R L    C    ++   +                RP  S +VS +  
Sbjct: 245 VYLLQGRRLLQPEYCPDPLYEVMLKCWHPK--------AEMRPSFSELVSRISA 290

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 60.9 bits (147), Expect = 2e-11
 Identities = 37/217 (17%), Positives = 68/217 (31%), Gaps = 30/217 (13%)

Query: 87  TNNFASENEISERGFGPVYRGL-LADGKVIEVKQLS---SKSKQGNREIVNEIGMISALQ 142
           ++ +     +   G   V+    L   + + VK L    ++          E    +AL 
Sbjct: 6   SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65

Query: 143 HPNLVKLYRLC-TETLKQPIVYMAPEYAKHGYLTDKAEVCS-----------FGIVTLEI 190
           HP +V +Y     ET   P+ Y+  EY     L D                         
Sbjct: 66  HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 125

Query: 191 ESGRSNVICR-TKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSV 249
            S ++ +I R  K     +       +             FG       S  +   +++V
Sbjct: 126 FSHQNGIIHRDVKPANIMISATNAVKVM-----------DFGIARAIADSGNSVTQTAAV 174

Query: 250 TPTNRPLMSFVVSM--LEDKAEVCSFGIVTLEIESGR 284
             T + L         ++ +++V S G V  E+ +G 
Sbjct: 175 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 211

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.5 bits (146), Expect = 3e-11
 Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 9/89 (10%)

Query: 93  ENEISERGFGPVYRGLLAD---GKVIEVKQLSSKSKQGN--REIVNEIGMISALQHPNLV 147
           + E+    FG V +G        K + VK L +++       E++ E  ++  L +P +V
Sbjct: 12  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71

Query: 148 KLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
           ++  +C          +  E A+ G L  
Sbjct: 72  RMIGICE----AESWMLVMEMAELGPLNK 96

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (99), Expect = 3e-05
 Identities = 22/117 (18%), Positives = 38/117 (32%), Gaps = 13/117 (11%)

Query: 150 YRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLL 209
           Y       K P+ + APE   +   + K++V SFG++  E  S         K  +   +
Sbjct: 163 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 222

Query: 210 DWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED 266
              G  +        A C +  +         +          NRP  + V   L +
Sbjct: 223 LEKGERMGCP-----AGCPREMYDLMNLCWTYD--------VENRPGFAAVELRLRN 266

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 61.2 bits (148), Expect = 3e-11
 Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 4/91 (4%)

Query: 88  NNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNL 146
           +++    E+    FG V+R    A G     K + +  +     +  EI  +S L+HP L
Sbjct: 26  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 85

Query: 147 VKLYRLCTETLKQPIVYMAPEYAKHGYLTDK 177
           V L+    +      + M  E+   G L +K
Sbjct: 86  VNLHDAFED---DNEMVMIYEFMSGGELFEK 113

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.5 bits (146), Expect = 3e-11
 Identities = 35/219 (15%), Positives = 74/219 (33%), Gaps = 33/219 (15%)

Query: 81  RQIKAATNNFA-SENEISERGFGPVYRGLLA---DGKVIEVKQLSSKSKQGNRE-IVNEI 135
           +++    +N   ++ E+    FG V +G+         + +K L   +++ + E ++ E 
Sbjct: 1   KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA 60

Query: 136 GMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGI-------VTL 188
            ++  L +P +V+L  +C        + +  E A  G L          I       +  
Sbjct: 61  QIMHQLDNPYIVRLIGVCQA----EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLH 116

Query: 189 EIESG-----RSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGND 243
           ++  G       N + R    +  LL               A  S FG        D   
Sbjct: 117 QVSMGMKYLEEKNFVHRDLAARNVLLVNRHY----------AKISDFGLSKALGADDSYY 166

Query: 244 QCSSSVTPTNRPLMSFVVSM--LEDKAEVCSFGIVTLEI 280
              S+     +      ++      +++V S+G+   E 
Sbjct: 167 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEA 205

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 0.001
 Identities = 18/117 (15%), Positives = 34/117 (29%), Gaps = 13/117 (11%)

Query: 150 YRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLL 209
           Y       K P+ + APE       + +++V S+G+   E  S       + K  +    
Sbjct: 165 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF 224

Query: 210 DWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED 266
              G  ++   +     C    +            C       +RP    V   +  
Sbjct: 225 IEQGKRMECPPE-----CPPELYALMSD-------C-WIYKWEDRPDFLTVEQRMRA 268

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.4 bits (146), Expect = 3e-11
 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 4/88 (4%)

Query: 93  ENEISERGFGPVYRGLLAD-GKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKL 149
           + EI    F  VY+GL  +    +   +L  +  +K   +    E  M+  LQHPN+V+ 
Sbjct: 14  DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRF 73

Query: 150 YRLCTETLKQPI-VYMAPEYAKHGYLTD 176
           Y     T+K    + +  E    G L  
Sbjct: 74  YDSWESTVKGKKCIVLVTELMTSGTLKT 101

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (93), Expect = 2e-04
 Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)

Query: 163 YMAPEYAKHGYLTDKAEVCSFGIVTLEIESGR 194
           +MAPE  +  Y  +  +V +FG+  LE+ +  
Sbjct: 179 FMAPEMYEEKY-DESVDVYAFGMCMLEMATSE 209

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.4 bits (146), Expect = 4e-11
 Identities = 18/84 (21%), Positives = 39/84 (46%), Gaps = 4/84 (4%)

Query: 94  NEISERGFGPVYRG-LLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRL 152
            E+ +  FG VY+        +   K + +KS++   + + EI ++++  HPN+VKL   
Sbjct: 18  GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 77

Query: 153 CTETLKQPIVYMAPEYAKHGYLTD 176
                 +  +++  E+   G +  
Sbjct: 78  FYY---ENNLWILIEFCAGGAVDA 98

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.0 bits (145), Expect = 4e-11
 Identities = 21/91 (23%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 89  NFASENEISERGFGPVYRG-LLADGKVIEVKQL--SSKSKQGNREIVNEIGMISALQHPN 145
           ++     I    +G   +    +DGK++  K+L   S ++   + +V+E+ ++  L+HPN
Sbjct: 5   DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 64

Query: 146 LVKLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
           +V+ Y    +     + Y+  EY + G L  
Sbjct: 65  IVRYYDRIIDRTNTTL-YIVMEYCEGGDLAS 94

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (90), Expect = 4e-04
 Identities = 8/42 (19%), Positives = 17/42 (40%)

Query: 153 CTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGR 194
             +       YM+PE        +K+++ S G +  E+ +  
Sbjct: 170 FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM 211

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 60.4 bits (146), Expect = 4e-11
 Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 7/91 (7%)

Query: 90  FASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGN---REIVNEIGMISALQHPN 145
           F+   EI    FG VY    + + +V+ +K++S   KQ N   ++I+ E+  +  L+HPN
Sbjct: 17  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76

Query: 146 LVKLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
            ++          +   ++  EY        
Sbjct: 77  TIQYRGCYLR---EHTAWLVMEYCLGSASDL 104

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 59.5 bits (143), Expect = 7e-11
 Identities = 33/208 (15%), Positives = 70/208 (33%), Gaps = 22/208 (10%)

Query: 88  NNFASENEISERGFGPVYRGLLADGKVIEVKQL--SSKSKQGNREIVNEIGMISALQHPN 145
             +    +I E  +G VY+     G+   +K++    + +      + EI ++  L+H N
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61

Query: 146 LVKLYRLCTETLKQPIVYMAP--------EYAKHGYLTDKAEVCSFGIVTLEIESGRSNV 197
           +VKLY +     +  +V+           +  + G  +  A+     ++          V
Sbjct: 62  IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV 121

Query: 198 ICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLM 257
           + R  + +  L++  G              + FG                 VT   R   
Sbjct: 122 LHRDLKPQNLLINREGEL----------KIADFGL-ARAFGIPVRKYTHEIVTLWYRAPD 170

Query: 258 SFVVSMLED-KAEVCSFGIVTLEIESGR 284
             + S       ++ S G +  E+ +G 
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNGT 198

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.9 bits (142), Expect = 1e-10
 Identities = 27/203 (13%), Positives = 62/203 (30%), Gaps = 27/203 (13%)

Query: 95  EISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLC 153
           ++    FG V+R +  +  K    K +  K       +  EI +++  +H N++ L+   
Sbjct: 12  DLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIARHRNILHLHESF 70

Query: 154 TETLKQPIVYMAPEYAKHGYLTDK----------AEVCSFGIVTLEIES--GRSNVICRT 201
                   + M  E+     + ++           E+ S+     E        N+    
Sbjct: 71  ES---MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFD 127

Query: 202 KEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVV 261
              +  +     S          ++     F   R+   G++       P          
Sbjct: 128 IRPENIIYQTRRS----------STIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQH 177

Query: 262 SMLEDKAEVCSFGIVTLEIESGR 284
            ++    ++ S G +   + SG 
Sbjct: 178 DVVSTATDMWSLGTLVYVLLSGI 200

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 58.1 bits (140), Expect = 3e-10
 Identities = 32/217 (14%), Positives = 69/217 (31%), Gaps = 25/217 (11%)

Query: 81  RQIKAATNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNRE-IVNEIGMI 138
           +Q +   + +   + +    F  V         K++ +K ++ K+ +G    + NEI ++
Sbjct: 2   KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVL 61

Query: 139 SALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTD-----------KAEVCSFGIVT 187
             ++HPN+V L  +         +Y+  +    G L D            A    F ++ 
Sbjct: 62  HKIKHPNIVALDDIYES---GGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 118

Query: 188 LEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSS 247
                    ++ R  + +  L   L    K              F   +    G+   ++
Sbjct: 119 AVKYLHDLGIVHRDLKPENLLYYSLDEDSK---------IMISDFGLSKMEDPGSVLSTA 169

Query: 248 SVTPTNRPLMSFVVSMLEDKAEVCSFGIVTLEIESGR 284
             TP                 +  S G++   +  G 
Sbjct: 170 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 206

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.5 bits (138), Expect = 3e-10
 Identities = 34/214 (15%), Positives = 60/214 (28%), Gaps = 35/214 (16%)

Query: 88  NNFASENEISERGFGPVYRGLL----ADGKVIEVKQLSSK---SKQGNREIVNEIGMISA 140
            +     ++ +  FG V RG           + VK L        +   + + E+  + +
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67

Query: 141 LQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGI-------VTLEIESG 193
           L H NL++LY +       P + M  E A  G L D+                 +++  G
Sbjct: 68  LDHRNLIRLYGVVLT----PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 123

Query: 194 -----RSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSS 248
                    I R    +  LL                    FG       +D +      
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATRDL----------VKIGDFGLMRALPQNDDHYVMQEH 173

Query: 249 V--TPTNRPLMSFVVSMLEDKAEVCSFGIVTLEI 280
                      S         ++   FG+   E+
Sbjct: 174 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 207

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.5 bits (138), Expect = 4e-10
 Identities = 38/220 (17%), Positives = 87/220 (39%), Gaps = 25/220 (11%)

Query: 80  LRQIKAATNNFASENEISERGFGPVYRG-LLADGKVIE----VKQLS-SKSKQGNREIVN 133
           LR +K     F     +    FG VY+G  + +G+ ++    +K+L  + S + N+EI++
Sbjct: 3   LRILKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 60

Query: 134 EIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIV---TLEI 190
           E  +++++ +P++ +L  +C  +  Q I  + P      Y+ +  +      +    ++I
Sbjct: 61  EAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 120

Query: 191 ESG-----RSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQC 245
             G        ++ R    +  L+           K+     +K      +         
Sbjct: 121 AKGMNYLEDRRLVHRDLAARNVLVKTPQHV-----KITDFGLAKLLGAEEKEYH----AE 171

Query: 246 SSSVTPTNRPLMSFVVSMLEDKAEVCSFGIVTLEIESGRS 285
              V      L S +  +   +++V S+G+   E+ +  S
Sbjct: 172 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 211

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (99), Expect = 3e-05
 Identities = 19/116 (16%), Positives = 37/116 (31%), Gaps = 13/116 (11%)

Query: 150 YRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLL 209
                E  K PI +MA E   H   T +++V S+G+   E+ +  S         +   +
Sbjct: 166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 225

Query: 210 DWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLE 265
              G  L +        C+   +    +    +          +RP    ++    
Sbjct: 226 LEKGERLPQPPI-----CTIDVYMIMVKCWMID--------ADSRPKFRELIIEFS 268

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.5 bits (138), Expect = 4e-10
 Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 8/94 (8%)

Query: 88  NNFASENEISERGFGPVYRGLLADGKVIE---VKQLS-SKSKQGNREIVNEIGMISAL-Q 142
           N+   ++ I E  FG V +  +    +     +K++    SK  +R+   E+ ++  L  
Sbjct: 10  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69

Query: 143 HPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
           HPN++ L   C     +  +Y+A EYA HG L D
Sbjct: 70  HPNIINLLGACE---HRGYLYLAIEYAPHGNLLD 100

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (89), Expect = 5e-04
 Identities = 21/112 (18%), Positives = 38/112 (33%), Gaps = 13/112 (11%)

Query: 154 TETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLG 213
               + P+ +MA E   +   T  ++V S+G++  EI S      C     + Y     G
Sbjct: 183 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 242

Query: 214 SYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLE 265
             L++        C    +   R+             P  RP  + ++  L 
Sbjct: 243 YRLEKPLN-----CDDEVYDLMRQCWREK--------PYERPSFAQILVSLN 281

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.5 bits (138), Expect = 4e-10
 Identities = 30/229 (13%), Positives = 73/229 (31%), Gaps = 28/229 (12%)

Query: 87  TNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNRE-IVNEIGMISALQHP 144
              + + + I E  +G V       +   + +K++S    Q   +  + EI ++   +H 
Sbjct: 7   GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 66

Query: 145 NLVKLYRLCTE--TLKQPIVYMAPEYA--------KHGYLTDKAEVCSFGIVTLEIESGR 194
           N++ +  +       +   VY+             K  +L++         +   ++   
Sbjct: 67  NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH 126

Query: 195 S-NVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTN 253
           S NV+ R  +    LL+          K+     ++          D +     +     
Sbjct: 127 SANVLHRDLKPSNLLLNTTCDL-----KICDFGLARVA------DPDHDHTGFLTEYVAT 175

Query: 254 RPLMSFVVSMLED----KAEVCSFGIVTLEIESGRSNVICRTKEDKFYL 298
           R   +  + +         ++ S G +  E+ S R     +   D+   
Sbjct: 176 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH 224

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.5 bits (138), Expect = 5e-10
 Identities = 33/216 (15%), Positives = 65/216 (30%), Gaps = 36/216 (16%)

Query: 89  NFASENEISERGFGPVYRG-LLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLV 147
           ++     I    FG VY+  L   G+++ +K++    +  NRE+     ++  L H N+V
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIV 76

Query: 148 KLYRLCT---ETLKQPIVYMAPEYAKHGYLTDKAEVCSFG---------IVTLEIESG-- 193
           +L        E   +  + +  +Y                         +   ++     
Sbjct: 77  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136

Query: 194 ---RSNVICR-TKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSV 249
                 +  R  K     L              + A      F   ++   G    S   
Sbjct: 137 YIHSFGICHRDIKPQNLLLDP------------DTAVLKLCDFGSAKQLVRGEPNVSYIC 184

Query: 250 TPT-NRPLMSFVVSMLEDKAEVCSFGIVTLEIESGR 284
           +     P + F  +      +V S G V  E+  G+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 57.4 bits (138), Expect = 5e-10
 Identities = 25/96 (26%), Positives = 36/96 (37%), Gaps = 10/96 (10%)

Query: 88  NNFASENEISERGFGPVYRG-LLADGKVIEVKQLSSK---SKQGNREIVNEIGMISALQ- 142
           N+F+    I   GFG VY       GK+  +K L  K    KQG    +NE  M+S +  
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63

Query: 143 --HPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
              P +V +        K   +    +    G L  
Sbjct: 64  GDCPFIVCMSYAFHTPDK---LSFILDLMNGGDLHY 96

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.3 bits (135), Expect = 1e-09
 Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 11/97 (11%)

Query: 88  NNFASENEISERGFGPVYRGLL------ADGKVIEVKQLSSKSKQGNRE-IVNEIGMISA 140
            N      +    FG V                + VK L  K+    RE +++E+ M++ 
Sbjct: 37  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 96

Query: 141 L-QHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
           L  H N+V L   CT       +Y+  EY  +G L +
Sbjct: 97  LGSHENIVNLLGACTL---SGPIYLIFEYCCYGDLLN 130

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 0.002
 Identities = 21/110 (19%), Positives = 37/110 (33%), Gaps = 12/110 (10%)

Query: 156 TLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSY 215
             + P+ +MAPE    G  T K++V S+GI+  EI S   N       D  +       +
Sbjct: 225 NARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGF 284

Query: 216 LKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLE 265
               +       ++  +   +     +           RP    + S L 
Sbjct: 285 ----KMDQPFYATEEIYIIMQSCWAFD--------SRKRPSFPNLTSFLG 322

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.0 bits (134), Expect = 1e-09
 Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 11/97 (11%)

Query: 88  NNFASENEISERGFGPVYRGLLA------DGKVIEVKQLSSKSKQGNRE-IVNEIGMISA 140
           N  +    +    FG V                + VK L   +    RE +++E+ ++S 
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 141 L-QHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
           L  H N+V L   CT      ++    EY  +G L +
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVIT---EYCCYGDLLN 116

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 2e-04
 Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 12/106 (11%)

Query: 160 PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRA 219
           P+ +MAPE   +   T +++V S+GI   E+ S  S+       D  +       +    
Sbjct: 210 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF---- 265

Query: 220 RKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLE 265
           R L+        +   +   D +        P  RP    +V ++E
Sbjct: 266 RMLSPEHAPAEMYDIMKTCWDAD--------PLKRPTFKQIVQLIE 303

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.6 bits (131), Expect = 2e-09
 Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 5/92 (5%)

Query: 88  NNFASENEISERGFGPVYRG-LLADGKVIEVKQLSSKSKQGNRE-IVNEIGMISALQHPN 145
            ++     + E  +G V         + + VK +  K      E I  EI +   L H N
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64

Query: 146 LVKLYRLCTETLKQPIVYMAPEYAKHGYLTDK 177
           +VK Y       +  I Y+  EY   G L D+
Sbjct: 65  VVKFYGHRR---EGNIQYLFLEYCSGGELFDR 93

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 0.001
 Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 1/56 (1%)

Query: 154 TETLKQPIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYL 208
              +   + Y+APE  K   +  +  +V S GIV   + +G       +   + Y 
Sbjct: 162 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 217

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.0 bits (132), Expect = 2e-09
 Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 7/97 (7%)

Query: 84  KAATNNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSK---SKQGNREIVNEIGMIS 139
           K    +F     + E  F  V     LA  +   +K L  +    +     +  E  ++S
Sbjct: 4   KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63

Query: 140 ALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
            L HP  VKLY    +      +Y    YAK+G L  
Sbjct: 64  RLDHPFFVKLYFTFQD---DEKLYFGLSYAKNGELLK 97

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (82), Expect = 0.004
 Identities = 5/42 (11%), Positives = 16/42 (38%)

Query: 153 CTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGR 194
              +      Y++PE          +++ + G +  ++ +G 
Sbjct: 166 RANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 207

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.8 bits (131), Expect = 3e-09
 Identities = 37/213 (17%), Positives = 76/213 (35%), Gaps = 13/213 (6%)

Query: 95  EISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNR------EIVNEIGMISALQHPNLV 147
           E+    F  V +    + G     K +  +  + +R      +I  E+ ++  +QHPN++
Sbjct: 17  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76

Query: 148 KLYRLCTETLKQPIVYMAPEYAKHGYLTD---KAEVCSFGIVTLEIESGRSNVICRTKED 204
            L+ +      +  V +  E    G L D   + E  +    T  ++   + V       
Sbjct: 77  TLHEVYEN---KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ 133

Query: 205 KFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSML 264
             +      + +   R +         F    +   GN+  +   TP            L
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 193

Query: 265 EDKAEVCSFGIVTLEIESGRSNVICRTKEDKFY 297
             +A++ S G++T  + SG S  +  TK++   
Sbjct: 194 GLEADMWSIGVITYILLSGASPFLGDTKQETLA 226

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (128), Expect = 7e-09
 Identities = 16/96 (16%), Positives = 36/96 (37%), Gaps = 10/96 (10%)

Query: 88  NNFASENEISERGFGPVYRGLL------ADGKVIEVKQLS-SKSKQGNREIVNEIGMISA 140
                  E+ +  FG VY G+            + +K ++ + S +   E +NE  ++  
Sbjct: 20  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 79

Query: 141 LQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
               ++V+L  + ++     ++    E    G L  
Sbjct: 80  FNCHHVVRLLGVVSQGQPTLVIM---ELMTRGDLKS 112

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (101), Expect = 2e-05
 Identities = 26/120 (21%), Positives = 43/120 (35%), Gaps = 13/120 (10%)

Query: 150 YRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLL 209
           Y         P+ +M+PE  K G  T  ++V SFG+V  EI +           ++    
Sbjct: 188 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 247

Query: 210 DWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE 269
              G  L +        C    F+  R     N        P  RP    ++S ++++ E
Sbjct: 248 VMEGGLLDKPDN-----CPDMLFELMRMCWQYN--------PKMRPSFLEIISSIKEEME 294

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 53.7 bits (128), Expect = 7e-09
 Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 10/105 (9%)

Query: 79  HLRQIKAATNNFASENEISERGFGPVYRGLL------ADGKVIEVKQLSSKSKQGNR-EI 131
            L  ++   NN     +I E  FG V++             ++ VK L  ++    + + 
Sbjct: 4   KLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADF 63

Query: 132 VNEIGMISALQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
             E  +++   +PN+VKL  +C       +++   EY  +G L +
Sbjct: 64  QREAALMAEFDNPNIVKLLGVCAVGKPMCLLF---EYMAYGDLNE 105

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 37.1 bits (85), Expect = 0.002
 Identities = 22/120 (18%), Positives = 39/120 (32%), Gaps = 13/120 (10%)

Query: 150 YRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLL 209
           Y         PI +M PE   +   T +++V ++G+V  EI S           ++    
Sbjct: 195 YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYY 254

Query: 210 DWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE 269
              G+ L         +C    +   R              P +RP    +  +L+   E
Sbjct: 255 VRDGNILACPE-----NCPLELYNLMRLCWSKL--------PADRPSFCSIHRILQRMCE 301

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (127), Expect = 7e-09
 Identities = 16/83 (19%), Positives = 35/83 (42%), Gaps = 6/83 (7%)

Query: 88  NNFASENEISERGFGPVYRGLLADG-----KVIEVKQLSSKSKQGNR-EIVNEIGMISAL 141
           +    +  I    FG VY+G+L          + +K L +   +  R + + E G++   
Sbjct: 7   SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 66

Query: 142 QHPNLVKLYRLCTETLKQPIVYM 164
            H N+++L  + ++     I+  
Sbjct: 67  SHHNIIRLEGVISKYKPMMIITE 89

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (99), Expect = 3e-05
 Identities = 22/116 (18%), Positives = 38/116 (32%), Gaps = 13/116 (11%)

Query: 150 YRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLL 209
               T   K PI + APE   +   T  ++V SFGIV  E+ +                 
Sbjct: 166 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH----- 220

Query: 210 DWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLE 265
           + + +     R      C    ++   +                RP  + +VS+L+
Sbjct: 221 EVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQE--------RARRPKFADIVSILD 268

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.6 bits (125), Expect = 1e-08
 Identities = 39/222 (17%), Positives = 75/222 (33%), Gaps = 37/222 (16%)

Query: 86  ATNNFASENEISERGFGPVYRG--LLADGKVIEVKQLSSKSKQGNREI-----VNEIGMI 138
           A   +    EI E  +G V++   L   G+ + +K++  ++ +    +     V  +  +
Sbjct: 5   ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64

Query: 139 SALQHPNLVKLYRLCT--ETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSN 196
              +HPN+V+L+ +CT   T ++  + +  E+      T   +V   G+           
Sbjct: 65  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGV----------- 113

Query: 197 VICRTKEDKFYLLDWLG--SYLKRA----RKLNGA--------SCSKFGFKFYRRTSDGN 242
               T+  K  +   L    +L       R L                 F   R  S   
Sbjct: 114 ---PTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM 170

Query: 243 DQCSSSVTPTNRPLMSFVVSMLEDKAEVCSFGIVTLEIESGR 284
              S  VT   R     + S      ++ S G +  E+   +
Sbjct: 171 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 212

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.1 bits (124), Expect = 2e-08
 Identities = 29/238 (12%), Positives = 61/238 (25%), Gaps = 41/238 (17%)

Query: 88  NNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNL 146
           N +    +I    FG +Y G  +A G+ + +K    K+K    ++  E  +   +Q    
Sbjct: 7   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVG 64

Query: 147 VKLYRLCTETLKQPIVYMAPEYAKHGYLTDK-----------------------AEVCSF 183
           +   R C          M  E                                   + S 
Sbjct: 65  IPTIRWCGAE--GDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 122

Query: 184 GIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGND 243
             +  +++    N +    +    +          A+K   A   +       +   G  
Sbjct: 123 NFIHRDVKP--DNFLMGLGKKGNLVYI---IDFGLAKKYRDARTHQHIPYRENKNLTG-- 175

Query: 244 QCSSSVTPTNRPLMSFVVSMLEDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDW 301
                 T     + + +      + ++ S G V +    G           K    + 
Sbjct: 176 ------TARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYER 227

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 44.4 bits (104), Expect = 7e-06
 Identities = 11/115 (9%), Positives = 30/115 (26%), Gaps = 9/115 (7%)

Query: 153 CTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLD-W 211
             + L     Y +         + + ++ S G V +    G           K    +  
Sbjct: 169 ENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI 228

Query: 212 LGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED 266
               +    ++           +          C  S+   ++P  S++  +  +
Sbjct: 229 SEKKMSTPIEVLCKGYPSEFATYLNF-------C-RSLRFDDKPDYSYLRQLFRN 275

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.0 bits (124), Expect = 3e-08
 Identities = 16/93 (17%), Positives = 37/93 (39%), Gaps = 7/93 (7%)

Query: 88  NNFASENEISERGFGPVYRG-LLADGKVIEVKQLSSK---SKQGNREIVNEIGMISALQH 143
            +F     +    FG V+      +G+   +K L  +     +      +E  M+S + H
Sbjct: 4   QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63

Query: 144 PNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
           P +++++    +      ++M  +Y + G L  
Sbjct: 64  PFIIRMWGTFQD---AQQIFMIMDYIEGGELFS 93

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.4 bits (122), Expect = 3e-08
 Identities = 35/203 (17%), Positives = 68/203 (33%), Gaps = 12/203 (5%)

Query: 89  NFASENEISERGFGPVYRGL-LADGKVIEVKQL--SSKSKQGNREIVNEIGMISALQHPN 145
           NF    +I E  +G VY+      G+V+ +K++   ++++      + EI ++  L HPN
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62

Query: 146 LVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDK 205
           +VKL  +     K  +V+         ++   A       +           +      +
Sbjct: 63  IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122

Query: 206 FYLLDWLGSYLK-RARKLNGASCSKFG-FKFYRRTSDGNDQCSSSVTPTNR--PLMSFVV 261
               D     LK +   +N     K   F   R         +  V       P +    
Sbjct: 123 VLHRD-----LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177

Query: 262 SMLEDKAEVCSFGIVTLEIESGR 284
                  ++ S G +  E+ + R
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.7 bits (123), Expect = 4e-08
 Identities = 42/212 (19%), Positives = 66/212 (31%), Gaps = 29/212 (13%)

Query: 88  NNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSK---SKQGNREIVNEIGMISALQH 143
           N+F     + +  FG V      A G+   +K L  +   +K      V E  ++   +H
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64

Query: 144 PNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTD-----------KAEVCSFGIVTLEIES 192
           P L  L            +    EYA  G L             +A      IV+     
Sbjct: 65  PFLTALKYAFQT---HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121

Query: 193 GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPT 252
              +V+ R  + +  +LD  G       K+      K G       SDG    +   TP 
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHI-----KITDFGLCKEGI------SDGATMKTFCGTPE 170

Query: 253 NRPLMSFVVSMLEDKAEVCSFGIVTLEIESGR 284
                    +      +    G+V  E+  GR
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 5e-08
 Identities = 35/206 (16%), Positives = 68/206 (33%), Gaps = 26/206 (12%)

Query: 94  NEISERGFGPVYRGLLADG------KVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLV 147
           + + E  F  VY+    +       K I++   S      NR  + EI ++  L HPN++
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 148 KLYRLCTETLKQPIVYMAPEYAKHGYLTDK------AEVCSFGIVTLEI--ESGRSNVIC 199
            L           +V+   E      + D       + + ++ ++TL+      +  ++ 
Sbjct: 64  GLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILH 123

Query: 200 RTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSF 259
           R  +    LLD  G       KL     +K         S         VT   R     
Sbjct: 124 RDLKPNNLLLDENGVL-----KLADFGLAKSF------GSPNRAYTHQVVTRWYRAPELL 172

Query: 260 VVSMLED-KAEVCSFGIVTLEIESGR 284
             + +     ++ + G +  E+    
Sbjct: 173 FGARMYGVGVDMWAVGCILAELLLRV 198

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.5 bits (120), Expect = 8e-08
 Identities = 31/215 (14%), Positives = 66/215 (30%), Gaps = 32/215 (14%)

Query: 88  NNFASENEISERGFGPVYRG-LLADGKVIEVKQLSSKSKQGNREI----VNEIGMISALQ 142
            +F     + +  FG V+        +   +K L       + ++    V +  +  A +
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61

Query: 143 HPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDK---------AEVCSFGIVTLE--IE 191
           HP L  ++        +  ++   EY   G L            +    +    +     
Sbjct: 62  HPFLTHMFCTFQT---KENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQF 118

Query: 192 SGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSV-T 250
                ++ R  +    LLD  G              + FG    +    G+ + ++   T
Sbjct: 119 LHSKGIVYRDLKLDNILLDKDGHI----------KIADFG--MCKENMLGDAKTNTFCGT 166

Query: 251 PTNRPLMSFVVSMLEDKAEVCSFGIVTLEIESGRS 285
           P        +        +  SFG++  E+  G+S
Sbjct: 167 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS 201

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 9e-08
 Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 7/93 (7%)

Query: 88  NNFASENEISERGFGPVYRG-LLADGKVIEVKQLSSK---SKQGNREIVNEIGMISALQH 143
            +F     + +  FG VY         ++ +K L            ++  E+ + S L+H
Sbjct: 6   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65

Query: 144 PNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
           PN+++LY    +      VY+  EYA  G +  
Sbjct: 66  PNILRLYGYFHD---ATRVYLILEYAPLGTVYR 95

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (87), Expect = 0.001
 Identities = 10/41 (24%), Positives = 19/41 (46%)

Query: 154 TETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGR 194
             TL   + Y+ PE  +     +K ++ S G++  E   G+
Sbjct: 161 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 201

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.1 bits (119), Expect = 1e-07
 Identities = 29/201 (14%), Positives = 56/201 (27%), Gaps = 30/201 (14%)

Query: 100 GFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLC-TETL 157
             G V +       +   +K L     +  RE+  E+    A Q P++V++  +      
Sbjct: 24  INGKVLQIFNKRTQEKFALKMLQ-DCPKARREV--EL-HWRASQCPHIVRIVDVYENLYA 79

Query: 158 KQPIVYMAPEYAKHGYLTDKAEVCSFGIVT--------LEIESG-----RSNVICR-TKE 203
            +  + +  E    G L  + +       T          I          N+  R  K 
Sbjct: 80  GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKP 139

Query: 204 DKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM 263
           +                    A      F F + T+  N   +   TP            
Sbjct: 140 ENLLYTSK----------RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK 189

Query: 264 LEDKAEVCSFGIVTLEIESGR 284
            +   ++ S G++   +  G 
Sbjct: 190 YDKSCDMWSLGVIMYILLCGY 210

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.5 bits (117), Expect = 2e-07
 Identities = 16/95 (16%), Positives = 42/95 (44%), Gaps = 8/95 (8%)

Query: 88  NNFASENEISERGFGPVYRG-LLADGKVIEVKQLSSKSKQGN--REIVNEIGMISALQHP 144
           + +    +I +  FG V++      G+ + +K++  ++++       + EI ++  L+H 
Sbjct: 10  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 69

Query: 145 NLVKLYRLCTETLKQPI-----VYMAPEYAKHGYL 174
           N+V L  +C             +Y+  ++ +H   
Sbjct: 70  NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLA 104

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 49.5 bits (117), Expect = 2e-07
 Identities = 22/209 (10%), Positives = 66/209 (31%), Gaps = 26/209 (12%)

Query: 88  NNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISALQ-HPN 145
           +++    ++    +  V+  + + + + + VK L    K+   +I  EI ++  L+  PN
Sbjct: 35  DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK---KIKREIKILENLRGGPN 91

Query: 146 LVKLYRLCTETLKQPIVYMAPEYAKHGYLTD--------KAEVCSFGIVTLEIESGRSNV 197
           ++ L  +  + + +    +  E+  +                   + I+          +
Sbjct: 92  IITLADIVKDPVSRTP-ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGI 150

Query: 198 ICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLM 257
           + R  +    ++D     L+              +        G +      +   +   
Sbjct: 151 MHRDVKPHNVMIDHEHRKLR-----------LIDWGLAEFYHPGQEYNVRVASRYFKGPE 199

Query: 258 SFVVSMLED-KAEVCSFGIVTLEIESGRS 285
             V   + D   ++ S G +   +   + 
Sbjct: 200 LLVDYQMYDYSLDMWSLGCMLASMIFRKE 228

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (116), Expect = 2e-07
 Identities = 13/106 (12%), Positives = 37/106 (34%), Gaps = 10/106 (9%)

Query: 78  FHLRQIKAATNNFASENEISER----GFGPVYRGL-LADGKVIEVKQL--SSKSKQGNRE 130
           F+ +++        +     +      +G V   +    G  + +K+L    +S+   + 
Sbjct: 4   FYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKR 63

Query: 131 IVNEIGMISALQHPNLVKLYRLCTETLKQPIV---YMAPEYAKHGY 173
              E+ ++  ++H N++ L  + T           Y+   +     
Sbjct: 64  AYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDL 109

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 48.7 bits (115), Expect = 3e-07
 Identities = 22/226 (9%), Positives = 59/226 (26%), Gaps = 13/226 (5%)

Query: 88  NNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNL 146
            ++     I E  FG ++ G  L + + + +K    +S     ++ +E      L     
Sbjct: 5   VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTG 62

Query: 147 VKLYRLCTETLKQPIVYM-------APEYAKHGYLTDKAEVCSFGIVTLEIESG--RSNV 197
           +       +     ++ +              G       V       L         ++
Sbjct: 63  IPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSL 122

Query: 198 ICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSV-TPTNRPL 256
           + R  +   +L+    S       +      KF      +      +  +   T     +
Sbjct: 123 VYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSI 182

Query: 257 MSFVVSMLEDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWV 302
            + +      + ++ + G V +    G                + +
Sbjct: 183 NTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERI 228

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 38.3 bits (88), Expect = 7e-04
 Identities = 10/120 (8%), Positives = 31/120 (25%), Gaps = 9/120 (7%)

Query: 148 KLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFY 207
            +     + L     YM+         + + ++ + G V +    G              
Sbjct: 164 HIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ 223

Query: 208 LLDWLGSYLKRA-RKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED 266
             + +G   +    +   A   +  +K+             ++     P   ++  +   
Sbjct: 224 KYERIGEKKQSTPLRELCAGFPEEFYKYMH-------YA-RNLAFDATPDYDYLQGLFSK 275

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (113), Expect = 5e-07
 Identities = 15/89 (16%), Positives = 38/89 (42%), Gaps = 3/89 (3%)

Query: 88  NNFASENEISERGFGPVYRGL-LADGKVIEVKQL--SSKSKQGNREIVNEIGMISALQHP 144
             +    +I E  +G V++       +++ +K++      +      + EI ++  L+H 
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61

Query: 145 NLVKLYRLCTETLKQPIVYMAPEYAKHGY 173
           N+V+L+ +     K  +V+   +     Y
Sbjct: 62  NIVRLHDVLHSDKKLTLVFEFCDQDLKKY 90

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (113), Expect = 5e-07
 Identities = 13/72 (18%), Positives = 30/72 (41%), Gaps = 3/72 (4%)

Query: 87  TNNFASENEISERGFGPVYRGL-LADGKVIEVKQLS--SKSKQGNREIVNEIGMISALQH 143
              + + + +    +G V        G  + VK+LS   +S    +    E+ ++  ++H
Sbjct: 17  PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76

Query: 144 PNLVKLYRLCTE 155
            N++ L  + T 
Sbjct: 77  ENVIGLLDVFTP 88

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 8e-07
 Identities = 20/99 (20%), Positives = 40/99 (40%), Gaps = 13/99 (13%)

Query: 88  NNFASENEISERGFGPVYRGLL--------ADGKVIEVKQLSSKSKQGN-REIVNEIGMI 138
           +       + E  FG V                  + VK L S + + +  ++++E+ M+
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72

Query: 139 SAL-QHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
             + +H N++ L   CT+     ++    EYA  G L +
Sbjct: 73  KMIGKHKNIINLLGACTQDGPLYVIV---EYASKGNLRE 108

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 7e-04
 Identities = 23/116 (19%), Positives = 43/116 (37%), Gaps = 13/116 (11%)

Query: 150 YRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLL 209
           Y   T   + P+ +MAPE       T +++V SFG++  EI +   +       ++ + L
Sbjct: 190 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 249

Query: 210 DWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLE 265
              G  + +        C+   +   R              P+ RP    +V  L+
Sbjct: 250 LKEGHRMDKPSN-----CTNELYMMMRDCWHAV--------PSQRPTFKQLVEDLD 292

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.6 bits (112), Expect = 9e-07
 Identities = 28/224 (12%), Positives = 63/224 (28%), Gaps = 26/224 (11%)

Query: 88  NNFASENEISERGFGPVYRGL-LADGKVIEVKQLS--SKSKQGNREIVNEIGMISALQHP 144
             + +   I     G V         + + +K+LS   +++   +    E+ ++  + H 
Sbjct: 17  KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76

Query: 145 NLVKLYRLCTETLKQPI---VYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRT 201
           N++ L  + T          VY+  E                  ++  +       +   
Sbjct: 77  NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ-----MLCG 131

Query: 202 KEDKFYLLDWLGSYLKRARKL--------NGASCSKFGFKFYRRTSDGNDQCSSSVTPTN 253
                  +  L S     R L        +  +     F   R            VT   
Sbjct: 132 -------IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY 184

Query: 254 RPLMSFVVSMLEDKAEVCSFGIVTLEIESGRSNVICRTKEDKFY 297
           R     +    ++  ++ S G +  E+   +     R   D++ 
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 228

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.2 bits (108), Expect = 2e-06
 Identities = 21/210 (10%), Positives = 60/210 (28%), Gaps = 19/210 (9%)

Query: 93  ENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYR 151
             ++    F  V+    + +   + +K +    K       +EI ++  +   +  K   
Sbjct: 18  VRKLGWGHFSTVWLAKDMVNNTHVAMKIVR-GDKVYTEAAEDEIKLLQRVNDADNTKEDS 76

Query: 152 LCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDW 211
           +    + + + +   +     ++    EV    ++ L  +     +     +     L  
Sbjct: 77  MGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLL 136

Query: 212 LGSYLKRARKL--------------NGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLM 257
              Y+ R   +                +  +    K     +        + +   R   
Sbjct: 137 GLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYR 196

Query: 258 SFVVSMLED---KAEVCSFGIVTLEIESGR 284
           S  V +       A++ S   +  E+ +G 
Sbjct: 197 SPEVLLGAPWGCGADIWSTACLIFELITGD 226

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (108), Expect = 2e-06
 Identities = 37/222 (16%), Positives = 73/222 (32%), Gaps = 28/222 (12%)

Query: 88  NNFASENEISERGFGPVYRGL------LADGKVIEVKQLSSKSKQG-NREIVNEIGMISA 140
           +       +    FG V           A  + + VK L   +    +R +++E+ ++  
Sbjct: 13  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72

Query: 141 -LQHPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVIC 199
              H N+V L   CT+     +V +  E+ K G L+          V  ++         
Sbjct: 73  IGHHLNVVNLLGACTKPGGPLMVIV--EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 130

Query: 200 RTKEDKFYL-------LDWLGSYLKRARKLNGASC----------SKFGF-KFYRRTSDG 241
            T E            +++L S     R L   +             FG  +   +  D 
Sbjct: 131 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 190

Query: 242 NDQCSSSVTPTNRPLMSFVVSMLEDKAEVCSFGIVTLEIESG 283
             +  + +        +    +   +++V SFG++  EI S 
Sbjct: 191 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 232

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 0.001
 Identities = 22/118 (18%), Positives = 42/118 (35%), Gaps = 14/118 (11%)

Query: 150 YRLCTETLKQPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLL 209
             +     + P+ +MAPE       T +++V SFG++  EI S        +      + 
Sbjct: 189 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL-----GASPYPGVKID 243

Query: 210 DWLGSYLKRARKLN-GASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED 266
           +     LK   ++      +   ++       G         P+ RP  S +V  L +
Sbjct: 244 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE--------PSQRPTFSELVEHLGN 293

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.9 bits (100), Expect = 2e-05
 Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 4/81 (4%)

Query: 88  NNFASENEISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREI---VNEIGMISALQH 143
           + F     +    FG V        G    +K L  +     ++I   +NE  ++ A+  
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100

Query: 144 PNLVKLYRLCTETLKQPIVYM 164
           P LVKL     +     +V  
Sbjct: 101 PFLVKLEFSFKDNSNLYMVME 121

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 42.4 bits (99), Expect = 3e-05
 Identities = 15/99 (15%), Positives = 34/99 (34%), Gaps = 14/99 (14%)

Query: 89  NFASENEISERGFGPVYRGL-LADGKVIEVKQLS---------SKSKQGNREIVNEIGMI 138
           N+  +  +       V R +     K   VK +           + ++     + E+ ++
Sbjct: 4   NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63

Query: 139 SALQ-HPNLVKLYRLCTETLKQPIVYMAPEYAKHGYLTD 176
             +  HPN+++L             ++  +  K G L D
Sbjct: 64  RKVSGHPNIIQLKDTYETNTF---FFLVFDLMKKGELFD 99

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 7e-05
 Identities = 33/233 (14%), Positives = 73/233 (31%), Gaps = 31/233 (13%)

Query: 72  DLPTGSFHLRQIKAATNNFASENEISERGFGPVYRGLLA----DGKVIEVKQLS----SK 123
           +L T +      K    NF     +    +G V+          GK+  +K L      +
Sbjct: 8   ELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQ 67

Query: 124 SKQGNREIVNEIGMISALQH-PNLVKLYRLCTETLKQPIVYMAPEYAKHGYLT------- 175
             +       E  ++  ++  P LV L+        +  +++  +Y   G L        
Sbjct: 68  KAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT---ETKLHLILDYINGGELFTHLSQRE 124

Query: 176 ----DKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFG 231
                + ++    IV       +  +I R  + +  LLD  G            +     
Sbjct: 125 RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHV--------VLTDFGLS 176

Query: 232 FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAEVCSFGIVTLEIESGR 284
            +F    ++       ++      ++    S  +   +  S G++  E+ +G 
Sbjct: 177 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA 229

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 1e-04
 Identities = 35/210 (16%), Positives = 68/210 (32%), Gaps = 31/210 (14%)

Query: 95  EISERGFGPVYRGL-LADGKVIEVKQLSSKSKQGNREIVN------EIGMISALQ--HPN 145
            +   GFG VY G+ ++D   + +K +         E+ N      E+ ++  +      
Sbjct: 11  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70

Query: 146 LVKLYRLCTETLKQPIVYMAPE--------YAKHGYLTDK-AEVCSFGIVTLEIESGRSN 196
           +++L           ++   PE          + G L ++ A    + ++          
Sbjct: 71  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 130

Query: 197 VICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPL 256
           V+ R  +D+  L+D     LK            FG     + +   D      T    P 
Sbjct: 131 VLHRDIKDENILIDLNRGELK---------LIDFGSGALLKDTVYTDFDG---TRVYSPP 178

Query: 257 MSFVVSMLEDK-AEVCSFGIVTLEIESGRS 285
                     + A V S GI+  ++  G  
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDI 208

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	307
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.98
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.98
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.98
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.98
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.97
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.97
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.97
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.97
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.97
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.97
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.97
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.97
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.97
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.97
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.97
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.97
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.96
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.96
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.96
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.96
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.96
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.96
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.96
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.96
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.96
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.96
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.96
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.96
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.96
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.96
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.96
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.95
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.95
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.95
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.95
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.95
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.95
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.95
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.95
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.95
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.95
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.95
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.95
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.94
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.94
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.94
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.94
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.94
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.94
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.94
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.93
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.93
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.93
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.92
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.92
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.92
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.92
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.9
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.31
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	80.24

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.1e-34  Score=247.16  Aligned_cols=164  Identities=20%  Similarity=0.292  Sum_probs=134.7

Q ss_pred             cCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--------
Q 045092           88 NNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--------  159 (307)
                      ++|+..+.||+|+||.||+|+.++++.||||.++... ...++|.+|+.++.+++||||++++|+|.+....        
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~   82 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA   82 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc-CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence            6899999999999999999999888899999997643 3457899999999999999999999999865221        


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        83 ~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~  162 (258)
T d1k2pa_          83 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK  162 (258)
T ss_dssp             TEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCSC
T ss_pred             CCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccCCCceeecccC
Confidence                                                                                            


Q ss_pred             -CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHH
Q 045092          160 -PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRR  237 (307)
Q Consensus       160 -t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  237 (307)
                       |+.|+|||.+.++.++.++|||||||++|||+| |+.||......      + +...+..      ...+..+..++.+
T Consensus       163 ~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~------~-~~~~i~~------~~~~~~p~~~~~~  229 (258)
T d1k2pa_         163 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS------E-TAEHIAQ------GLRLYRPHLASEK  229 (258)
T ss_dssp             CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHH------H-HHHHHHT------TCCCCCCTTCCHH
T ss_pred             CCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHH------H-HHHHHHh------CCCCCCcccccHH
Confidence             778999999999999999999999999999998 89998643321      1 1222222      2223334556678


Q ss_pred             HHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          238 TSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       238 ~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      +.+++..|| +.||++|||+++|++.|.+
T Consensus       230 l~~li~~cl-~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         230 VYTIMYSCW-HEKADERPTFKILLSNILD  257 (258)
T ss_dssp             HHHHHHHTT-CSSGGGSCCHHHHHHHHHC
T ss_pred             HHHHHHHHc-cCCHhHCcCHHHHHHHhhC
Confidence            999999999 9999999999999999865

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-33  Score=246.71  Aligned_cols=166  Identities=20%  Similarity=0.302  Sum_probs=131.8

Q ss_pred             cCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--------
Q 045092           88 NNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--------  159 (307)
                      ++|+..+.||+|+||.||+|.+.+++.||||+++.. ....++|.+|++++.+++|||||+++|+|.+....        
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~   83 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   83 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCC-cCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence            578888999999999999999888889999999754 34457899999999999999999999999765221        


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        84 ~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~  163 (263)
T d1sm2a_          84 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK  163 (263)
T ss_dssp             TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC-----------------
T ss_pred             CCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccCCCceeeccee
Confidence                                                                                            


Q ss_pred             -CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHH
Q 045092          160 -PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRT  238 (307)
Q Consensus       160 -t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  238 (307)
                       |+.|+|||.+.++.++.++|||||||++|||+|+..|+....  ..   .+.. ..+..+      ..+..+..++.++
T Consensus       164 gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~--~~---~~~~-~~i~~~------~~~~~p~~~~~~l  231 (263)
T d1sm2a_         164 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR--SN---SEVV-EDISTG------FRLYKPRLASTHV  231 (263)
T ss_dssp             -CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSC--CH---HHHH-HHHHHT------CCCCCCTTSCHHH
T ss_pred             cCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCC--CH---HHHH-HHHHhc------CCCCCccccCHHH
Confidence             778999999999999999999999999999999544442211  11   1111 112221      2233344566789


Q ss_pred             HHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          239 SDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      .+++..|| +.||++||+|++|++.|+.+
T Consensus       232 ~~li~~cl-~~~p~~Rps~~~il~~L~~i  259 (263)
T d1sm2a_         232 YQIMNHCW-KERPEDRPAFSRLLRQLAEI  259 (263)
T ss_dssp             HHHHHHHT-CSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHc-cCCHhHCcCHHHHHHHHHHH
Confidence            99999999 99999999999999999865

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.1e-33  Score=248.21  Aligned_cols=166  Identities=24%  Similarity=0.308  Sum_probs=133.0

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      .++|+..+.||+|+||.||+|.+.+++.||||+++.. ....+.|.+|+.+|.+++|||||+++|+|.++...       
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~iv~Ey~~   90 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYME   90 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCT
T ss_pred             HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccC-cCCHHHHHHHHHHHHhCCCCCEeEEEeeeccCCeEEEEEeCC
Confidence            5678888999999999999999888889999999754 34457899999999999999999999998765111       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        91 ~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~  170 (272)
T d1qpca_          91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA  170 (272)
T ss_dssp             TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTC
T ss_pred             CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccceEEccCCcccccccc
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHH
Q 045092          160 --PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRR  237 (307)
Q Consensus       160 --t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  237 (307)
                        |+.|||||++.++.++.++|||||||++|||+||..|+....  ..   .+ +...      +.....+..+..++.+
T Consensus       171 ~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~--~~---~~-~~~~------i~~~~~~~~p~~~~~~  238 (272)
T d1qpca_         171 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM--TN---PE-VIQN------LERGYRMVRPDNCPEE  238 (272)
T ss_dssp             CCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC--CH---HH-HHHH------HHTTCCCCCCTTCCHH
T ss_pred             CCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCC--CH---HH-HHHH------HHhcCCCCCcccChHH
Confidence              778999999999999999999999999999999766553221  11   11 1111      2222334445567778


Q ss_pred             HHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          238 TSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       238 ~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      +.+++..|| +.||++||||++|++.|++
T Consensus       239 l~~li~~cl-~~~P~~Rpt~~ei~~~L~~  266 (272)
T d1qpca_         239 LYQLMRLCW-KERPEDRPTFDYLRSVLED  266 (272)
T ss_dssp             HHHHHHHHT-CSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHc-CCCHhHCcCHHHHHHHhhh
Confidence            999999999 9999999999999999876

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.98  E-value=6.1e-33  Score=246.64  Aligned_cols=177  Identities=23%  Similarity=0.329  Sum_probs=136.2

Q ss_pred             cccHHHHHHHhcC---------cccCCcccCCCCeeEEEEEEc-CC---CEEEEEEccCC-ChhcHHHHHHHHHHHhhCC
Q 045092           77 SFHLRQIKAATNN---------FASENEISERGFGPVYRGLLA-DG---KVIEVKQLSSK-SKQGNREIVNEIGMISALQ  142 (307)
Q Consensus        77 ~~~~~el~~~t~~---------f~~~~~lG~G~~g~Vy~~~~~-~~---~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~  142 (307)
                      .++++++..++.+         |+..+.||+|+||.||+|... ++   ..||||.+... .....+.|.+|+++|++++
T Consensus         6 ~~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~   85 (299)
T d1jpaa_           6 PFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD   85 (299)
T ss_dssp             GGGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCC
T ss_pred             CCCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCC
Confidence            3566666666544         445678999999999999964 33   26899998654 4445678999999999999


Q ss_pred             CCCccceeeeeecCCCC---------------------------------------------------------------
Q 045092          143 HPNLVKLYRLCTETLKQ---------------------------------------------------------------  159 (307)
Q Consensus       143 h~niv~l~g~~~~~~~~---------------------------------------------------------------  159 (307)
                      |||||+++|+|.+....                                                               
T Consensus        86 HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~  165 (299)
T d1jpaa_          86 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNL  165 (299)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC
T ss_pred             CCCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCC
Confidence            99999999999765221                                                               


Q ss_pred             ------------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccH
Q 045092          160 ------------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYL  208 (307)
Q Consensus       160 ------------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l  208 (307)
                                                    |+.|||||.+.++.++.++|||||||++|||+| |+.||......   .+
T Consensus       166 ~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~---~~  242 (299)
T d1jpaa_         166 VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ---DV  242 (299)
T ss_dssp             CEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HH
T ss_pred             cEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH---HH
Confidence                                          678999999999999999999999999999998 89999643221   11


Q ss_pred             HHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          209 LDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                          ...+..      ...+..+..++..+.+++..|| +.||.+||+|.||++.|+.+
T Consensus       243 ----~~~i~~------~~~~~~~~~~~~~l~~li~~cl-~~~P~~RPs~~ei~~~L~~~  290 (299)
T d1jpaa_         243 ----INAIEQ------DYRLPPPMDCPSALHQLMLDCW-QKDRNHRPKFGQIVNTLDKM  290 (299)
T ss_dssp             ----HHHHHT------TCCCCCCTTCCHHHHHHHHHHT-CSSTTTSCCHHHHHHHHHHH
T ss_pred             ----HHHHHc------CCCCCCCccchHHHHHHHHHHc-CCCHhHCcCHHHHHHHHHHH
Confidence                111221      2223344567778999999999 99999999999999998764

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.98  E-value=4.4e-33  Score=246.16  Aligned_cols=173  Identities=20%  Similarity=0.294  Sum_probs=137.5

Q ss_pred             HHHHHhcCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-
Q 045092           82 QIKAATNNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-  159 (307)
Q Consensus        82 el~~~t~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-  159 (307)
                      +++...++|...+.||+|+||.||+|... +++.||||+++.. ....++|.+|+++|++++|||||+++|+|.+.... 
T Consensus        11 ~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (287)
T d1opja_          11 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY   89 (287)
T ss_dssp             TTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTT-CSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             ccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCc-cchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeE
Confidence            34444678888999999999999999964 6889999998654 34467899999999999999999999999875322 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        90 iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~  169 (287)
T d1opja_          90 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT  169 (287)
T ss_dssp             EEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSS
T ss_pred             EEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccceeecCCCC
Confidence                                                                                            


Q ss_pred             ---------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC
Q 045092          160 ---------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF  230 (307)
Q Consensus       160 ---------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l  230 (307)
                               |+.|+|||++.++.++.++|||||||++|||++|..|+.....  .   .. +...+.      ....+..
T Consensus       170 ~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~--~---~~-~~~~i~------~~~~~~~  237 (287)
T d1opja_         170 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--L---SQ-VYELLE------KDYRMER  237 (287)
T ss_dssp             SEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCC--H---HH-HHHHHH------TTCCCCC
T ss_pred             ceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcch--H---HH-HHHHHh------cCCCCCC
Confidence                     7789999999999999999999999999999998777642221  1   11 122222      2223444


Q ss_pred             chhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          231 GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       231 ~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      +..++.++.+++..|| +.||++||||.+|++.|+...
T Consensus       238 ~~~~~~~l~~li~~cl-~~dP~~Rps~~ei~~~L~~~~  274 (287)
T d1opja_         238 PEGCPEKVYELMRACW-QWNPSDRPSFAEIHQAFETMF  274 (287)
T ss_dssp             CTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHTT
T ss_pred             CccchHHHHHHHHHHc-CCCHhHCcCHHHHHHHHHHHH
Confidence            5567779999999999 999999999999999887653

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.3e-32  Score=242.57  Aligned_cols=169  Identities=21%  Similarity=0.307  Sum_probs=131.8

Q ss_pred             cCcccCCcccCCCCeeEEEEEEcCC-----CEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           88 NNFASENEISERGFGPVYRGLLADG-----KVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~~~-----~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      +.|+..++||+|+||.||+|.+...     ..||||+++.. .......|.+|++++.+++|||||+++|+|.+....  
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~   86 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI   86 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence            5678889999999999999996532     36999998754 333456799999999999999999999999765211  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        87 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~  166 (283)
T d1mqba_          87 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA  166 (283)
T ss_dssp             EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC----------
T ss_pred             EEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhcccCCCcc
Confidence                                                                                            


Q ss_pred             ---------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC
Q 045092          160 ---------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF  230 (307)
Q Consensus       160 ---------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l  230 (307)
                               |+.|||||++.++.++.++|||||||++|||++|..|+.....  .   .+ +...      +.....+..
T Consensus       167 ~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~--~---~~-~~~~------i~~~~~~~~  234 (283)
T d1mqba_         167 TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS--N---HE-VMKA------INDGFRLPT  234 (283)
T ss_dssp             -------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--H---HH-HHHH------HHTTCCCCC
T ss_pred             ceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCC--H---HH-HHHH------HhccCCCCC
Confidence                     6789999999999999999999999999999997666542221  1   11 1112      222233444


Q ss_pred             chhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          231 GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       231 ~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                      +..++.++.+++..|| +.||++||+|.+|++.|+.+..
T Consensus       235 ~~~~~~~l~~li~~cl-~~~p~~RPt~~eil~~L~~l~~  272 (283)
T d1mqba_         235 PMDCPSAIYQLMMQCW-QQERARRPKFADIVSILDKLIR  272 (283)
T ss_dssp             CTTCBHHHHHHHHHHT-CSSTTTSCCHHHHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHC-cCCHhHCcCHHHHHHHHHHHhh
Confidence            5567778999999999 9999999999999999876543

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.4e-32  Score=239.70  Aligned_cols=164  Identities=22%  Similarity=0.265  Sum_probs=132.1

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      .++|+..+.||+|+||.||+|.. .|+.||||+++..  ...+.|.+|++++++++||||++++|+|.+....       
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey   82 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   82 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             HHHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEec
Confidence            45678889999999999999998 4789999999654  3346899999999999999999999998654211       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        83 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~~  162 (262)
T d1byga_          83 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL  162 (262)
T ss_dssp             CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------------C
T ss_pred             cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeecccccceecCCCCccccc
Confidence                                                                                            


Q ss_pred             CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHH
Q 045092          160 PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRT  238 (307)
Q Consensus       160 t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  238 (307)
                      |..|+|||++.++.++.++|||||||++|||+| |+.|+.....   ..+...          +.....+.++..++.++
T Consensus       163 ~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~---~~~~~~----------i~~~~~~~~~~~~~~~~  229 (262)
T d1byga_         163 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL---KDVVPR----------VEKGYKMDAPDGCPPAV  229 (262)
T ss_dssp             CTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG---GGHHHH----------HTTTCCCCCCTTCCHHH
T ss_pred             cccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCH---HHHHHH----------HHcCCCCCCCccCCHHH
Confidence            788999999999999999999999999999998 6777754322   222221          22233455566677799


Q ss_pred             HHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          239 SDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      .+++..|| +.||.+||||.+|+++|+.+
T Consensus       230 ~~li~~cl-~~dP~~Rps~~~l~~~L~~i  257 (262)
T d1byga_         230 YEVMKNCW-HLDAAMRPSFLQLREQLEHI  257 (262)
T ss_dssp             HHHHHHHT-CSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHc-ccCHhHCcCHHHHHHHHHHH
Confidence            99999999 99999999999999998764

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.3e-32  Score=239.15  Aligned_cols=170  Identities=22%  Similarity=0.305  Sum_probs=131.9

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      .++|.+.+.||+|+||.||+|++.  ..||||+++..  .....+.|.+|+.+|.+++|||||+++|++.++...     
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~~~~lv~Ey   84 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQW   84 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEeccEEEEEEec
Confidence            567888999999999999999864  36999998643  344567899999999999999999999998664110     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        85 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~  164 (276)
T d1uwha_          85 CEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE  164 (276)
T ss_dssp             CCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC-----------
T ss_pred             CCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCccccc
Confidence                                                                                            


Q ss_pred             ----Cccccchhhhcc---CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCch
Q 045092          160 ----PIVYMAPEYAKH---GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGF  232 (307)
Q Consensus       160 ----t~~y~aPE~~~~---~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  232 (307)
                          |+.|||||++..   +.|+.++|||||||++|||+||+.||......      ..+...+..+.  .....+.++.
T Consensus       165 ~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~------~~~~~~~~~~~--~~p~~~~~~~  236 (276)
T d1uwha_         165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR------DQIIFMVGRGY--LSPDLSKVRS  236 (276)
T ss_dssp             -CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH------HHHHHHHHHTS--CCCCGGGSCT
T ss_pred             ccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChH------HHHHHHHhcCC--CCCcchhccc
Confidence                889999999863   45899999999999999999999999643221      11222222221  1111223345


Q ss_pred             hhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          233 KFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       233 ~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      .++..+.+++.+|| +.||.+||||.+|++.|+.+
T Consensus       237 ~~~~~l~~li~~cl-~~dp~~RPt~~~il~~Le~l  270 (276)
T d1uwha_         237 NCPKAMKRLMAECL-KKKRDERPLFPQILASIELL  270 (276)
T ss_dssp             TCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHc-CCCHhHCcCHHHHHHHHHHH
Confidence            56778999999999 99999999999999998764

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.7e-32  Score=240.74  Aligned_cols=166  Identities=18%  Similarity=0.286  Sum_probs=131.4

Q ss_pred             hcCcccCC-cccCCCCeeEEEEEEc---CCCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           87 TNNFASEN-EISERGFGPVYRGLLA---DGKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        87 t~~f~~~~-~lG~G~~g~Vy~~~~~---~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      .++|...+ +||+|+||.||+|...   ++..||||.++.. .....+.|.+|+++|.+++|||||+++|+|.++...  
T Consensus         7 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~lv   86 (285)
T d1u59a_           7 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLV   86 (285)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEE
T ss_pred             ccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccCeEEEE
Confidence            35566666 4999999999999853   3557999999754 344567899999999999999999999998754100  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        87 mE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~  166 (285)
T d1u59a_          87 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYY  166 (285)
T ss_dssp             EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEE
T ss_pred             EEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhccccccccc
Confidence                                                                                            


Q ss_pred             --------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC
Q 045092          160 --------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF  230 (307)
Q Consensus       160 --------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l  230 (307)
                              |+.|||||++.++.++.++|||||||++|||+| |+.||......   .    +...+..+      ..+.+
T Consensus       167 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~---~----~~~~i~~~------~~~~~  233 (285)
T d1u59a_         167 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---E----VMAFIEQG------KRMEC  233 (285)
T ss_dssp             CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH---H----HHHHHHTT------CCCCC
T ss_pred             ccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH---H----HHHHHHcC------CCCCC
Confidence                    678999999999999999999999999999998 99999643221   1    12222222      23444


Q ss_pred             chhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          231 GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       231 ~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      +..++.++.+++..|| +.||++||+|.+|++.|+.
T Consensus       234 p~~~~~~l~~li~~cl-~~~p~~RPs~~~i~~~L~~  268 (285)
T d1u59a_         234 PPECPPELYALMSDCW-IYKWEDRPDFLTVEQRMRA  268 (285)
T ss_dssp             CTTCCHHHHHHHHHTT-CSSGGGSCCHHHHHHHHHH
T ss_pred             CCcCCHHHHHHHHHHc-CCCHhHCcCHHHHHHHHHH
Confidence            5667789999999999 9999999999999998875

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=2.2e-32  Score=243.23  Aligned_cols=174  Identities=22%  Similarity=0.313  Sum_probs=138.3

Q ss_pred             HHHHHHHhcCcccCCcccCCCCeeEEEEEEc------CCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeee
Q 045092           80 LRQIKAATNNFASENEISERGFGPVYRGLLA------DGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRL  152 (307)
Q Consensus        80 ~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~  152 (307)
                      +.+|+...++|+..+.||+|+||+||+|+..      +++.||||+++... .+..++|.+|+++|++++|+||++++++
T Consensus         5 ~~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~   84 (301)
T d1lufa_           5 LLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGV   84 (301)
T ss_dssp             HHHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             hhhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceee
Confidence            4556667889999999999999999999853      35789999997543 3345679999999999999999999999


Q ss_pred             eecCCCC-------------------------------------------------------------------------
Q 045092          153 CTETLKQ-------------------------------------------------------------------------  159 (307)
Q Consensus       153 ~~~~~~~-------------------------------------------------------------------------  159 (307)
                      |......                                                                         
T Consensus        85 ~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHr  164 (301)
T d1lufa_          85 CAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHR  164 (301)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             eccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEee
Confidence            8764211                                                                         


Q ss_pred             ----------------------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCC-CCCc
Q 045092          160 ----------------------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGR-SNVI  198 (307)
Q Consensus       160 ----------------------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~-~p~~  198 (307)
                                                              |+.|+|||++.+..++.++|||||||++|||++|. +||.
T Consensus       165 DlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~  244 (301)
T d1lufa_         165 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY  244 (301)
T ss_dssp             CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred             EEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCC
Confidence                                                    67899999999999999999999999999999986 5664


Q ss_pred             CCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          199 CRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       199 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      .....      + +...+..+      ..+..+..++.++.+++..|| +.||++||||.||+++|+.+
T Consensus       245 ~~~~~------e-~~~~v~~~------~~~~~p~~~~~~~~~li~~cl-~~~P~~RPt~~ev~~~L~~i  299 (301)
T d1lufa_         245 GMAHE------E-VIYYVRDG------NILACPENCPLELYNLMRLCW-SKLPADRPSFCSIHRILQRM  299 (301)
T ss_dssp             TSCHH------H-HHHHHHTT------CCCCCCTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHT
T ss_pred             CCCHH------H-HHHHHHcC------CCCCCCccchHHHHHHHHHHc-CCChhHCcCHHHHHHHHHHh
Confidence            33221      1 11222222      223445567778999999999 99999999999999999875

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.8e-32  Score=237.91  Aligned_cols=162  Identities=16%  Similarity=0.325  Sum_probs=129.5

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      .++|+..+.||+|+||.||+|+. .+|+.||||.+...  .....+.+.+|+++|++++|||||++++++.+....    
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~i   82 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   82 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEE
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEE
Confidence            36799999999999999999995 47899999998754  333456799999999999999999999988643110    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        83 vmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~  162 (269)
T d2java1          83 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR  162 (269)
T ss_dssp             EEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHH
T ss_pred             EEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeecccee
Confidence                                                                                            


Q ss_pred             --------------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhccc
Q 045092          160 --------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGA  225 (307)
Q Consensus       160 --------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  225 (307)
                                    |+.|||||.+.++.++.++|||||||++|||++|+.||.....      .+ +...+..+      
T Consensus       163 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~------~~-~~~~i~~~------  229 (269)
T d2java1         163 ILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ------KE-LAGKIREG------  229 (269)
T ss_dssp             HC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH------HH-HHHHHHHT------
T ss_pred             ecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCH------HH-HHHHHHcC------
Confidence                          8899999999999999999999999999999999999964321      11 11222222      


Q ss_pred             ccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          226 SCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       226 ~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ..+.++..++.++.+++.+|+ +.||.+|||+.|+++
T Consensus       230 ~~~~~~~~~s~~l~~li~~~L-~~dp~~Rps~~ell~  265 (269)
T d2java1         230 KFRRIPYRYSDELNEIITRML-NLKDYHRPSVEEILE  265 (269)
T ss_dssp             CCCCCCTTSCHHHHHHHHHHT-CSSGGGSCCHHHHHT
T ss_pred             CCCCCCcccCHHHHHHHHHHc-CCChhHCcCHHHHHh
Confidence            123345567778999999999 999999999999875

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.3e-32  Score=241.97  Aligned_cols=167  Identities=22%  Similarity=0.371  Sum_probs=130.7

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCC----EEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGK----VIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~----~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      .+|+..+.||+|+||.||+|... +|+    .||||.++.. .....+.|.+|+.++++++|||||+++|+|.+....  
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~v   88 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   88 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeeEE
Confidence            46999999999999999999953 444    5899988653 344567899999999999999999999999875211  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        89 ~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~  168 (317)
T d1xkka_          89 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY  168 (317)
T ss_dssp             EECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC--
T ss_pred             EEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceecccccccc
Confidence                                                                                            


Q ss_pred             -------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCc
Q 045092          160 -------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFG  231 (307)
Q Consensus       160 -------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~  231 (307)
                             |+.|||||++.++.++.++|||||||++|||+| |+.||.......   +    ...+..+      ..+..+
T Consensus       169 ~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~---~----~~~i~~~------~~~~~p  235 (317)
T d1xkka_         169 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---I----SSILEKG------ERLPQP  235 (317)
T ss_dssp             ------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGG---H----HHHHHHT------CCCCCC
T ss_pred             cccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHH---H----HHHHHcC------CCCCCC
Confidence                   789999999999999999999999999999999 788886443222   2    1222222      123334


Q ss_pred             hhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          232 FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       232 ~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      ..++..+.+++..|| +.||.+|||+.+|+..|....
T Consensus       236 ~~~~~~~~~li~~cl-~~dP~~RPs~~eil~~l~~~~  271 (317)
T d1xkka_         236 PICTIDVYMIMVKCW-MIDADSRPKFRELIIEFSKMA  271 (317)
T ss_dssp             TTBCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             cccCHHHHHHHHHhC-CCChhhCcCHHHHHHHHHHHH
Confidence            556778999999999 999999999999999887654

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9.8e-32  Score=237.98  Aligned_cols=163  Identities=18%  Similarity=0.242  Sum_probs=131.1

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      +.|+..+.||+|+||.||+|.. .+|+.||||+++.......+.+.+|+.+|++++|||||++++++.+....       
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence            4699999999999999999994 57999999998765555567899999999999999999999998765211       


Q ss_pred             -------------------------------------------------------------------------------C
Q 045092          160 -------------------------------------------------------------------------------P  160 (307)
Q Consensus       160 -------------------------------------------------------------------------------t  160 (307)
                                                                                                     |
T Consensus       100 ~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt  179 (293)
T d1yhwa1         100 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGT  179 (293)
T ss_dssp             TTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSC
T ss_pred             CCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeeccccccccccccC
Confidence                                                                                           8


Q ss_pred             ccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHH
Q 045092          161 IVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSD  240 (307)
Q Consensus       161 ~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  240 (307)
                      +.|||||.+.++.++.++|||||||++|||++|+.||.....      .+.+......+     ......+..++..+.+
T Consensus       180 ~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~------~~~~~~~~~~~-----~~~~~~~~~~s~~~~~  248 (293)
T d1yhwa1         180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP------LRALYLIATNG-----TPELQNPEKLSAIFRD  248 (293)
T ss_dssp             GGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHHC-----SCCCSSGGGSCHHHHH
T ss_pred             CCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCH------HHHHHHHHhCC-----CCCCCCcccCCHHHHH
Confidence            999999999999999999999999999999999999953321      11122222111     1122234456678999


Q ss_pred             HhccccCCCCCCCCCCHHHHHH
Q 045092          241 GNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       241 l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ++.+|+ +.||.+|||+.|+++
T Consensus       249 li~~~L-~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         249 FLNRCL-DMDVEKRGSAKELLQ  269 (293)
T ss_dssp             HHHHHT-CSSTTTSCCHHHHTT
T ss_pred             HHHHHc-cCChhHCcCHHHHhc
Confidence            999999 999999999999975

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9e-32  Score=237.34  Aligned_cols=167  Identities=24%  Similarity=0.315  Sum_probs=134.3

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           87 TNNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      .++|++.+.||+|+||.||+|...+++.||||+++.. ....+.|.+|+.++.+++|+|||+++|+|.+....       
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~lv~Ey~~   94 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMS   94 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCT
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcc-cCCHHHHHHHHHHHHhcccCCEeEEEEEEecCCeEEEEEecC
Confidence            3678999999999999999999887888999999654 34567899999999999999999999998664111       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        95 ~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~  174 (285)
T d1fmka3          95 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA  174 (285)
T ss_dssp             TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC-------------
T ss_pred             CCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccchhhhccCCCceeeccc
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHH
Q 045092          160 --PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRR  237 (307)
Q Consensus       160 --t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  237 (307)
                        |+.|+|||++.++.++.++|||||||++|||++|..|+.....     ..+.+ ..+      .....+..+..++.+
T Consensus       175 ~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~-----~~~~~-~~i------~~~~~~~~~~~~~~~  242 (285)
T d1fmka3         175 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-----NREVL-DQV------ERGYRMPCPPECPES  242 (285)
T ss_dssp             -CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-----HHHHH-HHH------HTTCCCCCCTTSCHH
T ss_pred             cccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCC-----HHHHH-HHH------HhcCCCCCCcccCHH
Confidence              7889999999999999999999999999999997666643221     11111 111      112233445567778


Q ss_pred             HHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          238 TSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       238 ~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      +.+++.+|| +.||++||+|++|+.+|++.
T Consensus       243 l~~li~~cl-~~dP~~Rps~~~i~~~L~~~  271 (285)
T d1fmka3         243 LHDLMCQCW-RKEPEERPTFEYLQAFLEDY  271 (285)
T ss_dssp             HHHHHHHHT-CSSGGGSCCHHHHHHHHHTT
T ss_pred             HHHHHHHHc-ccCHhHCcCHHHHHHHHhhh
Confidence            999999999 99999999999999998874

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=8.9e-32  Score=236.52  Aligned_cols=159  Identities=23%  Similarity=0.320  Sum_probs=125.2

Q ss_pred             CcccCCCCeeEEEEEEc---CCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---------
Q 045092           94 NEISERGFGPVYRGLLA---DGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---------  159 (307)
Q Consensus        94 ~~lG~G~~g~Vy~~~~~---~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---------  159 (307)
                      ++||+|+||.||+|.+.   +++.||||+++...  ....+.|.+|+.+|++++|||||+++|+|..+...         
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~~~~lvmE~~~~g   92 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG   92 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccCCEEEEEEcCCCC
Confidence            47999999999999854   34689999996532  23356899999999999999999999999754110         


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        93 ~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~g  172 (277)
T d1xbba_          93 PLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW  172 (277)
T ss_dssp             EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CC
T ss_pred             cHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhccccccccccccccCC
Confidence                                                                                            


Q ss_pred             CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHH
Q 045092          160 PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRT  238 (307)
Q Consensus       160 t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  238 (307)
                      |+.|||||.+.++.++.++|||||||++|||+| |+.||......   .    +...+..+      ..+..+..++.++
T Consensus       173 t~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~---~----~~~~i~~~------~~~~~p~~~~~~~  239 (277)
T d1xbba_         173 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---E----VTAMLEKG------ERMGCPAGCPREM  239 (277)
T ss_dssp             CGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---H----HHHHHHTT------CCCCCCTTCCHHH
T ss_pred             CceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHH---H----HHHHHHcC------CCCCCCcccCHHH
Confidence            788999999999999999999999999999998 89999643211   1    12222222      2334455677899


Q ss_pred             HHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          239 SDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      .+++..|| +.||++||+|++|+..|+.
T Consensus       240 ~~li~~cl-~~dp~~RPs~~~i~~~L~~  266 (277)
T d1xbba_         240 YDLMNLCW-TYDVENRPGFAAVELRLRN  266 (277)
T ss_dssp             HHHHHHHT-CSSTTTSCCHHHHHHHHHH
T ss_pred             HHHHHHHc-CCCHhHCcCHHHHHHHhhC
Confidence            99999999 9999999999999988875

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.1e-31  Score=235.31  Aligned_cols=163  Identities=20%  Similarity=0.220  Sum_probs=129.1

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      +.|++.+.||+|+||.||+|.. .+++.||||++........+.|.+|+++|++++|||||++++++.+....       
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            4688899999999999999995 47899999999876666677899999999999999999999998765211       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        92 ~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~~  171 (288)
T d2jfla1          92 AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI  171 (288)
T ss_dssp             TTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCCC
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCCcccccccc
Confidence                                                                                            


Q ss_pred             -Cccccchhhhc-----cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchh
Q 045092          160 -PIVYMAPEYAK-----HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFK  233 (307)
Q Consensus       160 -t~~y~aPE~~~-----~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  233 (307)
                       |+.|||||++.     +..|+.++|||||||++|||++|+.||......+   +   +.... .+.    ......+..
T Consensus       172 Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~---~---~~~i~-~~~----~~~~~~~~~  240 (288)
T d2jfla1         172 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR---V---LLKIA-KSE----PPTLAQPSR  240 (288)
T ss_dssp             SCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGG---H---HHHHH-HSC----CCCCSSGGG
T ss_pred             cccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHH---H---HHHHH-cCC----CCCCCcccc
Confidence             88999999984     4568999999999999999999999996443222   1   11111 111    111122345


Q ss_pred             hHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          234 FYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       234 ~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ++.++.+++..|+ +.||.+|||+.|+++
T Consensus       241 ~s~~~~~li~~~L-~~dp~~R~t~~ell~  268 (288)
T d2jfla1         241 WSSNFKDFLKKCL-EKNVDARWTTSQLLQ  268 (288)
T ss_dssp             SCHHHHHHHHHHS-CSSTTTSCCHHHHTT
T ss_pred             CCHHHHHHHHHHc-cCChhHCcCHHHHhc
Confidence            6678999999999 999999999999975

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.3e-31  Score=233.67  Aligned_cols=160  Identities=19%  Similarity=0.313  Sum_probs=129.1

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      ++|++.+.||+|+||.||+|... +++.||||++...   .....+.+.+|++++++++|||||++++++.+....    
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            57999999999999999999964 7899999998643   223456789999999999999999999998875211    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        86 Ey~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (263)
T d2j4za1          86 EYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC  165 (263)
T ss_dssp             ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCEETT
T ss_pred             eecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCCCcccccC
Confidence                                                                                            


Q ss_pred             -CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHH
Q 045092          160 -PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRT  238 (307)
Q Consensus       160 -t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  238 (307)
                       |+.|||||.+.+..++.++|||||||++|||++|+.||.....      .+ ....+...       .+.++..++.++
T Consensus       166 Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~------~~-~~~~i~~~-------~~~~p~~~s~~~  231 (263)
T d2j4za1         166 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY------QE-TYKRISRV-------EFTFPDFVTEGA  231 (263)
T ss_dssp             EEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HH-HHHHHHTT-------CCCCCTTSCHHH
T ss_pred             CCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCH------HH-HHHHHHcC-------CCCCCccCCHHH
Confidence             8899999999999999999999999999999999999964321      11 11111111       223445567789


Q ss_pred             HHHhccccCCCCCCCCCCHHHHHH
Q 045092          239 SDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .+++..|+ +.||++|||+.|+++
T Consensus       232 ~~li~~~L-~~dp~~R~t~~eil~  254 (263)
T d2j4za1         232 RDLISRLL-KHNPSQRPMLREVLE  254 (263)
T ss_dssp             HHHHHHHT-CSSGGGSCCHHHHHT
T ss_pred             HHHHHHHc-cCCHhHCcCHHHHHc
Confidence            99999999 999999999999975

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-31  Score=235.32  Aligned_cols=167  Identities=20%  Similarity=0.285  Sum_probs=133.3

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEcC----CCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--
Q 045092           87 TNNFASENEISERGFGPVYRGLLAD----GKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~~----~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--  159 (307)
                      .++|++.+.||+|+||.||+|....    +..||||.++... ....+.|.+|+.+|++++|||||+++|++.++...  
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~iv   85 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII   85 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEE
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCeEEEE
Confidence            4678999999999999999998532    3568999986543 33456799999999999999999999999754110  


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        86 ~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~  165 (273)
T d1mp8a_          86 MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK  165 (273)
T ss_dssp             EECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC--------------
T ss_pred             EEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhheeccCCccee
Confidence                                                                                            


Q ss_pred             ------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCch
Q 045092          160 ------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGF  232 (307)
Q Consensus       160 ------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  232 (307)
                            |+.|+|||.+.++.++.++|||||||++|||++ |+.||......+   +..    .+..      ...+.++.
T Consensus       166 ~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~---~~~----~i~~------~~~~~~~~  232 (273)
T d1mp8a_         166 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---VIG----RIEN------GERLPMPP  232 (273)
T ss_dssp             -----CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHH----HHHT------TCCCCCCT
T ss_pred             ccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHH---HHH----HHHc------CCCCCCCC
Confidence                  788999999999999999999999999999998 899986443322   221    1222      22234455


Q ss_pred             hhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          233 KFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       233 ~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      .++..+.+++..|| +.||++|||+.+|++.|+.+
T Consensus       233 ~~~~~~~~li~~cl-~~dp~~Rps~~ei~~~L~~i  266 (273)
T d1mp8a_         233 NCPPTLYSLMTKCW-AYDPSRRPRFTELKAQLSTI  266 (273)
T ss_dssp             TCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHc-CCCHhHCcCHHHHHHHHHHH
Confidence            67789999999999 99999999999999998764

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.8e-31  Score=234.11  Aligned_cols=166  Identities=20%  Similarity=0.301  Sum_probs=123.6

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc--CC--CEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-
Q 045092           88 NNFASENEISERGFGPVYRGLLA--DG--KVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~--~~--~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-  159 (307)
                      ++|+..+.||+|+||.||+|+..  ++  ..||||+++..   .....+.|.+|+.+|.+++|||||+++|+|.++... 
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~~~~l   87 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM   87 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeecchhe
Confidence            56888999999999999999853  23  36899998653   233456899999999999999999999999765211 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        88 v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~  167 (273)
T d1u46a_          88 VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH  167 (273)
T ss_dssp             EEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCE
T ss_pred             eeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhcccCCCc
Confidence                                                                                            


Q ss_pred             ---------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC
Q 045092          160 ---------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK  229 (307)
Q Consensus       160 ---------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  229 (307)
                               |..|+|||.+.++.++.++|||||||++|||+| |+.||.....      .+.+....      .....+.
T Consensus       168 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~------~~~~~~i~------~~~~~~~  235 (273)
T d1u46a_         168 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG------SQILHKID------KEGERLP  235 (273)
T ss_dssp             EEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHH------TSCCCCC
T ss_pred             ceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCH------HHHHHHHH------hCCCCCC
Confidence                     668999999999999999999999999999998 8999853321      11112111      1222233


Q ss_pred             CchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          230 FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       230 l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                      .+..++..+.+++..|| +.||++||||.+|++.|.+
T Consensus       236 ~~~~~~~~l~~li~~cl-~~dp~~RPt~~ei~~~L~~  271 (273)
T d1u46a_         236 RPEDCPQDIYNVMVQCW-AHKPEDRPTFVALRDFLLE  271 (273)
T ss_dssp             CCTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHH
T ss_pred             CcccccHHHHHHHHHHc-CCChhHCcCHHHHHHHHHh
Confidence            34556678999999999 9999999999999998875

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.8e-31  Score=232.48  Aligned_cols=164  Identities=20%  Similarity=0.182  Sum_probs=124.0

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      .++|+..+.||+|+||.||+|.. .+|+.||||++.... .+..+.+.+|+.+|++++|||||++++++.+....     
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmE   83 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   83 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEe
Confidence            35799999999999999999995 478999999986543 23345789999999999999999999998765211     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        84 y~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~  163 (271)
T d1nvra_          84 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN  163 (271)
T ss_dssp             CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBC
T ss_pred             ccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccCCcccccc
Confidence                                                                                            


Q ss_pred             ----CccccchhhhccCCC-CchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          160 ----PIVYMAPEYAKHGYL-TDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       160 ----t~~y~aPE~~~~~~~-~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                          |+.|||||++.+..+ +.++||||+||++|||++|+.||........ .+     .....     ..........+
T Consensus       164 ~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~-~~-----~~~~~-----~~~~~~~~~~~  232 (271)
T d1nvra_         164 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EY-----SDWKE-----KKTYLNPWKKI  232 (271)
T ss_dssp             CCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSH-HH-----HHHHT-----TCTTSTTGGGS
T ss_pred             ceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHH-HH-----HHHhc-----CCCCCCccccC
Confidence                889999999988776 5789999999999999999999964432221 11     11111     11111112345


Q ss_pred             HHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      +.++.+++.+|+ +.||++|||+.|+++
T Consensus       233 s~~~~~li~~~L-~~dP~~R~t~~eil~  259 (271)
T d1nvra_         233 DSAPLALLHKIL-VENPSARITIPDIKK  259 (271)
T ss_dssp             CHHHHHHHHHHS-CSSTTTSCCHHHHTT
T ss_pred             CHHHHHHHHHHc-CCChhHCcCHHHHhc
Confidence            568889999999 999999999999865

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.4e-30  Score=233.84  Aligned_cols=168  Identities=23%  Similarity=0.279  Sum_probs=130.2

Q ss_pred             HhcCcccCCcccCCCCeeEEEEEEc-CC-----CEEEEEEccCC-ChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCC
Q 045092           86 ATNNFASENEISERGFGPVYRGLLA-DG-----KVIEVKQLSSK-SKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETL  157 (307)
Q Consensus        86 ~t~~f~~~~~lG~G~~g~Vy~~~~~-~~-----~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~  157 (307)
                      ..++|+..+.||+|+||.||+|... .+     ..||||.+... .......|.+|+.+|.++ +|||||+++|+|.+..
T Consensus        35 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~  114 (325)
T d1rjba_          35 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG  114 (325)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCC
Confidence            3468889999999999999999953 22     36999998654 334456899999999998 8999999999987652


Q ss_pred             CC------------------------------------------------------------------------------
Q 045092          158 KQ------------------------------------------------------------------------------  159 (307)
Q Consensus       158 ~~------------------------------------------------------------------------------  159 (307)
                      ..                                                                              
T Consensus       115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~N  194 (325)
T d1rjba_         115 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARN  194 (325)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGG
T ss_pred             eEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhc
Confidence            10                                                                              


Q ss_pred             ----------------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccC
Q 045092          160 ----------------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKED  204 (307)
Q Consensus       160 ----------------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~  204 (307)
                                                        |+.|||||.+.++.++.++|||||||++|||+| |+.||.......
T Consensus       195 ill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~  274 (325)
T d1rjba_         195 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA  274 (325)
T ss_dssp             EEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred             cccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHH
Confidence                                              788999999999999999999999999999998 899996433221


Q ss_pred             cccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcc
Q 045092          205 KFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLED  266 (307)
Q Consensus       205 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~  266 (307)
                        .    +...+.      ....+..+..++.++.+++..|| +.||++||||+||+++|..
T Consensus       275 --~----~~~~~~------~~~~~~~p~~~~~~l~~li~~cl-~~dP~~RPt~~ei~~~L~~  323 (325)
T d1rjba_         275 --N----FYKLIQ------NGFKMDQPFYATEEIYIIMQSCW-AFDSRKRPSFPNLTSFLGC  323 (325)
T ss_dssp             --H----HHHHHH------TTCCCCCCTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHH
T ss_pred             --H----HHHHHh------cCCCCCCCCcCCHHHHHHHHHHc-CCChhHCcCHHHHHHHHhC
Confidence              1    112222      22233445566778999999999 9999999999999999853

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.2e-30  Score=231.12  Aligned_cols=165  Identities=18%  Similarity=0.219  Sum_probs=128.0

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC------hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS------KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  159 (307)
                      .+.|++.+.||+|+||.||+|.. .+|+.||||+++...      ....+.|.+|+.+|++++|||||++++++.+....
T Consensus         9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~   88 (293)
T d1jksa_           9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   88 (293)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            36799999999999999999996 478999999986431      12356899999999999999999999998775211


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        89 ~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~  168 (293)
T d1jksa_          89 ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID  168 (293)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECT
T ss_pred             EEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcC
Confidence                                                                                            


Q ss_pred             ----------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCC
Q 045092          160 ----------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSK  229 (307)
Q Consensus       160 ----------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  229 (307)
                                |+.|+|||.+.++.++.++|||||||++|||++|+.||......      +... .+..+.   ....+.
T Consensus       169 ~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~------~~~~-~i~~~~---~~~~~~  238 (293)
T d1jksa_         169 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ------ETLA-NVSAVN---YEFEDE  238 (293)
T ss_dssp             TSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHH-HHHTTC---CCCCHH
T ss_pred             CCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHH------HHHH-HHHhcC---CCCCch
Confidence                      88899999999999999999999999999999999999643211      1111 111111   111111


Q ss_pred             CchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          230 FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       230 l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .....+..+.+++..|+ +.||.+|||+.|+++
T Consensus       239 ~~~~~s~~~~~li~~~L-~~dP~~R~s~~eil~  270 (293)
T d1jksa_         239 YFSNTSALAKDFIRRLL-VKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             HHTTSCHHHHHHHHTTS-CSSGGGSCCHHHHHH
T ss_pred             hcCCCCHHHHHHHHHHc-cCChhHCcCHHHHhc
Confidence            12234558899999999 999999999999986

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.5e-30  Score=227.76  Aligned_cols=159  Identities=21%  Similarity=0.313  Sum_probs=121.2

Q ss_pred             ccCCcccCCCCeeEEEEEEc-CCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--------
Q 045092           91 ASENEISERGFGPVYRGLLA-DGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--------  159 (307)
Q Consensus        91 ~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--------  159 (307)
                      +..++||+|+||+||+|... +++.||+|.+...  .....+.|.+|+++|++++|||||++++++.+....        
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            44568999999999999954 7889999998643  334456799999999999999999999987542110        


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        92 E~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~~~  171 (270)
T d1t4ha_          92 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK  171 (270)
T ss_dssp             ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBE
T ss_pred             eCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCccC
Confidence                                                                                            


Q ss_pred             ----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhH
Q 045092          160 ----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFY  235 (307)
Q Consensus       160 ----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  235 (307)
                          |+.|||||.+.+ .++.++|||||||++|||++|+.||.....  .   .. +...+..     ....+.+....+
T Consensus       172 ~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~--~---~~-~~~~i~~-----~~~~~~~~~~~~  239 (270)
T d1t4ha_         172 AVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN--A---AQ-IYRRVTS-----GVKPASFDKVAI  239 (270)
T ss_dssp             ESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS--H---HH-HHHHHTT-----TCCCGGGGGCCC
T ss_pred             CcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCccc--H---HH-HHHHHHc-----CCCCcccCccCC
Confidence                899999998864 699999999999999999999999953321  1   11 1111111     111222333455


Q ss_pred             HHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          236 RRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       236 ~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .++.+++.+|+ +.||++|||+.|+++
T Consensus       240 ~~~~~li~~~l-~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         240 PEVKEIIEGCI-RQNKDERYSIKDLLN  265 (270)
T ss_dssp             HHHHHHHHHHS-CSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHHc-cCCHhHCcCHHHHhC
Confidence            68899999999 999999999999975

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.1e-30  Score=231.33  Aligned_cols=163  Identities=23%  Similarity=0.263  Sum_probs=125.6

Q ss_pred             CCcccCCCCeeEEEEEEcCC----CEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--------
Q 045092           93 ENEISERGFGPVYRGLLADG----KVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--------  159 (307)
Q Consensus        93 ~~~lG~G~~g~Vy~~~~~~~----~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--------  159 (307)
                      .++||+|+||+||+|.+.++    ..||||+++.. .....+.|.+|+++|++++|||||+++|+|.+....        
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            36899999999999996422    36899999743 445567899999999999999999999998653110        


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       112 ~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~  191 (311)
T d1r0pa_         112 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK  191 (311)
T ss_dssp             TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTCT
T ss_pred             ecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhccccccccceec
Confidence                                                                                            


Q ss_pred             -----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          160 -----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       160 -----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                           |+.|+|||.+.++.++.++|||||||++|||+||+.|+......     .+.. ..+..+      ..+..+..+
T Consensus       192 ~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~-----~~~~-~~i~~g------~~~~~p~~~  259 (311)
T d1r0pa_         192 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----FDIT-VYLLQG------RRLLQPEYC  259 (311)
T ss_dssp             TCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-----------CH-HHHHTT------CCCCCCTTC
T ss_pred             ccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCH-----HHHH-HHHHcC------CCCCCcccC
Confidence                 67899999999999999999999999999999988887532211     1111 111222      123334456


Q ss_pred             HHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      +..+.+++..|| +.||++||+|.||++.|+.+.
T Consensus       260 ~~~l~~li~~cl-~~dP~~RPs~~ei~~~L~~i~  292 (311)
T d1r0pa_         260 PDPLYEVMLKCW-HPKAEMRPSFSELVSRISAIF  292 (311)
T ss_dssp             CHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHc-CCCHhHCcCHHHHHHHHHHHH
Confidence            678999999999 999999999999999998764

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=9.3e-31  Score=233.37  Aligned_cols=161  Identities=21%  Similarity=0.328  Sum_probs=125.6

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      .|+..+.||+|+||.||+|.. .+++.||||++....   ....+.+.+|+++|++++|||||++++++.+....     
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E   95 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEE
Confidence            488889999999999999995 578999999987543   23345799999999999999999999998765211     


Q ss_pred             ------------------------------------------------------------------------------Cc
Q 045092          160 ------------------------------------------------------------------------------PI  161 (307)
Q Consensus       160 ------------------------------------------------------------------------------t~  161 (307)
                                                                                                    |+
T Consensus        96 ~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~GT~  175 (309)
T d1u5ra_          96 YCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTP  175 (309)
T ss_dssp             CCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCSCG
T ss_pred             ecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCCCCccccCc
Confidence                                                                                          89


Q ss_pred             cccchhhhc---cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHH
Q 045092          162 VYMAPEYAK---HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRT  238 (307)
Q Consensus       162 ~y~aPE~~~---~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  238 (307)
                      .|||||++.   .+.|+.++|||||||++|||++|+.||.....      .+.+......      ...+.....++..+
T Consensus       176 ~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~------~~~~~~i~~~------~~~~~~~~~~s~~~  243 (309)
T d1u5ra_         176 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------MSALYHIAQN------ESPALQSGHWSEYF  243 (309)
T ss_dssp             GGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHS------CCCCCSCTTSCHHH
T ss_pred             cccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhC------CCCCCCCCCCCHHH
Confidence            999999985   35689999999999999999999999963321      1111221111      11111233456789


Q ss_pred             HHHhccccCCCCCCCCCCHHHHHH
Q 045092          239 SDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .+++..|+ +.||.+|||+.|+++
T Consensus       244 ~~li~~~L-~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         244 RNFVDSCL-QKIPQDRPTSEVLLK  266 (309)
T ss_dssp             HHHHHHHT-CSSGGGSCCHHHHTT
T ss_pred             HHHHHHHC-cCChhHCcCHHHHHh
Confidence            99999999 999999999999976

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.96  E-value=3.4e-30  Score=226.25  Aligned_cols=169  Identities=16%  Similarity=0.129  Sum_probs=130.4

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      .++|++.+.||+|+||.||+|.. .+|+.||||+++...   ......|.+|++++++++|||||++++++......   
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence            46799999999999999999995 579999999997542   23345799999999999999999999987653211   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        86 ~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~  165 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG  165 (277)
T ss_dssp             EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC---
T ss_pred             EEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhhhcccc
Confidence                                                                                            


Q ss_pred             -----------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccC
Q 045092          160 -----------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCS  228 (307)
Q Consensus       160 -----------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  228 (307)
                                 |+.|||||++.++.++.++|||||||++|||+||+.||.....      .+.....+....    ....
T Consensus       166 ~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~------~~~~~~~~~~~~----~~~~  235 (277)
T d1o6ya_         166 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP------VSVAYQHVREDP----IPPS  235 (277)
T ss_dssp             -------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHCCC----CCGG
T ss_pred             ccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCH------HHHHHHHHhcCC----CCCc
Confidence                       8899999999999999999999999999999999999964321      122222222211    1111


Q ss_pred             CCchhhHHHHHHHhccccCCCCCCCCC-CHHHHHHHhcc
Q 045092          229 KFGFKFYRRTSDGNDQCSSSVTPTNRP-LMSFVVSMLED  266 (307)
Q Consensus       229 ~l~~~~~~~~~~l~~~C~~~~dP~~RP-s~~~vl~~L~~  266 (307)
                      .....++.++.+++.+|+ +.||.+|| ++++++..|..
T Consensus       236 ~~~~~~s~~l~~li~~~L-~~dp~~R~~sa~~l~~~l~r  273 (277)
T d1o6ya_         236 ARHEGLSADLDAVVLKAL-AKNPENRYQTAAEMRADLVR  273 (277)
T ss_dssp             GTSSSCCHHHHHHHHHHT-CSSGGGSCSSHHHHHHHHHH
T ss_pred             hhccCCCHHHHHHHHHHc-cCCHhHCHhHHHHHHHHHHH
Confidence            223345678999999999 99999999 89999887765

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.96  E-value=3.1e-30  Score=233.80  Aligned_cols=166  Identities=19%  Similarity=0.178  Sum_probs=133.0

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      .++|++.+.||+|+||.||+|.. .+|+.||||++........+.+.+|+.+|.+++|||||++++++.+....      
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  104 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  104 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            46899999999999999999995 47899999999876666677899999999999999999999998765211      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       105 ~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~  184 (350)
T d1koaa2         105 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV  184 (350)
T ss_dssp             CCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEE
T ss_pred             CCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecccccccce
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 ---PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 ---t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                         |+.|||||++.+..++.++|||||||++|||++|+.||.....      .+.+... ...   ...........++.
T Consensus       185 ~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~------~~~~~~i-~~~---~~~~~~~~~~~~s~  254 (350)
T d1koaa2         185 TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND------DETLRNV-KSC---DWNMDDSAFSGISE  254 (350)
T ss_dssp             ECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHH-HHT---CCCSCCGGGGGCCH
T ss_pred             ecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCH------HHHHHHH-HhC---CCCCCcccccCCCH
Confidence               8999999999999999999999999999999999999964321      1112221 111   11112222234566


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .+.+++.+|+ +.||++|||+.|+++.
T Consensus       255 ~~~~li~~~L-~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         255 DGKDFIRKLL-LADPNTRMTIHQALEH  280 (350)
T ss_dssp             HHHHHHHHHC-CSSGGGSCCHHHHHHS
T ss_pred             HHHHHHHHHc-cCChhHCcCHHHHhcC
Confidence            8999999999 9999999999999874

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=1.3e-30  Score=232.24  Aligned_cols=166  Identities=16%  Similarity=0.165  Sum_probs=125.2

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCCh-hcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSK-QGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      .+.|+..+.||+|+||.||+|.. .+++.||||++..... .....+.+|+.+|++++|||||++++++.+....     
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            46699999999999999999995 4789999999875432 2345688999999999999999999998765210     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        88 ~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~  167 (307)
T d1a06a_          88 LVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS  167 (307)
T ss_dssp             CCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC-------------
T ss_pred             ccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCCeee
Confidence                                                                                            


Q ss_pred             ----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhH
Q 045092          160 ----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFY  235 (307)
Q Consensus       160 ----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  235 (307)
                          |+.|||||.+.++.++.++|||||||++|||++|+.||.....      .+ +...+..+.   ..........++
T Consensus       168 ~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~------~~-~~~~i~~~~---~~~~~~~~~~~s  237 (307)
T d1a06a_         168 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND------AK-LFEQILKAE---YEFDSPYWDDIS  237 (307)
T ss_dssp             -----CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HH-HHHHHHTTC---CCCCTTTTTTSC
T ss_pred             eeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCH------HH-HHHHHhccC---CCCCCccccCCC
Confidence                8999999999999999999999999999999999999964321      11 111121111   112222334566


Q ss_pred             HHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          236 RRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       236 ~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      .++.+++..|+ +.||++|||+.|+++.
T Consensus       238 ~~~~~li~~~L-~~dP~~R~s~~eil~h  264 (307)
T d1a06a_         238 DSAKDFIRHLM-EKDPEKRFTCEQALQH  264 (307)
T ss_dssp             HHHHHHHHHHS-CSSGGGSCCHHHHHHS
T ss_pred             HHHHHHHHHHc-cCCHhHCcCHHHHhcC
Confidence            78999999999 9999999999999874

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=9.4e-31  Score=231.10  Aligned_cols=160  Identities=18%  Similarity=0.237  Sum_probs=128.3

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      ++|++.+.||+|+||.||+|.. .+++.||||++...   .....+.+.+|+++|++++|||||++++++.+...     
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            5799999999999999999995 47899999998643   22345679999999999999999999999876521     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        88 Ey~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~  167 (288)
T d1uu3a_          88 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA  167 (288)
T ss_dssp             CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC--------
T ss_pred             EccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceecccCCccccc
Confidence                                                                                            


Q ss_pred             ----CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhh
Q 045092          159 ----QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKF  234 (307)
Q Consensus       159 ----~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (307)
                          +|+.|||||++.+..++.++|||||||++|||++|+.||.....   .   . +...+..+       ...++..+
T Consensus       168 ~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~---~---~-~~~~i~~~-------~~~~p~~~  233 (288)
T d1uu3a_         168 NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE---Y---L-IFQKIIKL-------EYDFPEKF  233 (288)
T ss_dssp             --CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH---H---H-HHHHHHTT-------CCCCCTTC
T ss_pred             ccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCH---H---H-HHHHHHcC-------CCCCCccC
Confidence                18899999999999999999999999999999999999964321   1   1 11111111       12344556


Q ss_pred             HHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          235 YRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       235 ~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      +.++.+++.+|+ +.||.+|||++|+++
T Consensus       234 s~~~~~li~~~L-~~dP~~R~t~~e~~~  260 (288)
T d1uu3a_         234 FPKARDLVEKLL-VLDATKRLGCEEMEG  260 (288)
T ss_dssp             CHHHHHHHHTTS-CSSGGGSTTSGGGTC
T ss_pred             CHHHHHHHHHHc-cCCHhHCcCHHHHcC
Confidence            778999999999 999999999998643

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.9e-30  Score=229.59  Aligned_cols=170  Identities=22%  Similarity=0.259  Sum_probs=132.2

Q ss_pred             HHhcCcccCCcccCCCCeeEEEEEE------cCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhC-CCCCccceeeeeecC
Q 045092           85 AATNNFASENEISERGFGPVYRGLL------ADGKVIEVKQLSSKS-KQGNREIVNEIGMISAL-QHPNLVKLYRLCTET  156 (307)
Q Consensus        85 ~~t~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~  156 (307)
                      ...++|++.+.||+|+||.||+|.+      .+++.||||+++... ......|.+|+.++.++ +|||||+++|+|.+.
T Consensus        20 ~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~   99 (311)
T d1t46a_          20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG   99 (311)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             CCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeC
Confidence            3457888899999999999999985      245689999997543 34456799999999999 799999999998765


Q ss_pred             CCC-----------------------------------------------------------------------------
Q 045092          157 LKQ-----------------------------------------------------------------------------  159 (307)
Q Consensus       157 ~~~-----------------------------------------------------------------------------  159 (307)
                      ...                                                                             
T Consensus       100 ~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~  179 (311)
T d1t46a_         100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT  179 (311)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE
T ss_pred             CEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeeccccccccccc
Confidence            211                                                                             


Q ss_pred             ------------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHhC-CCCCcCCCccCcccH
Q 045092          160 ------------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESG-RSNVICRTKEDKFYL  208 (307)
Q Consensus       160 ------------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg-~~p~~~~~~~~~~~l  208 (307)
                                                    |+.|+|||++.++.++.++|||||||++|||+|+ ++|+..... ..   
T Consensus       180 ~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~-~~---  255 (311)
T d1t46a_         180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV-DS---  255 (311)
T ss_dssp             TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS-SH---
T ss_pred             ccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCH-HH---
Confidence                                          8899999999999999999999999999999995 554532221 11   


Q ss_pred             HHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          209 LDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                        .+...+..+      ..+..+...+..+.+++..|| +.||.+||||.+|+++|+..
T Consensus       256 --~~~~~i~~~------~~~~~~~~~~~~l~~Li~~cl-~~dP~~RPs~~~il~~L~~~  305 (311)
T d1t46a_         256 --KFYKMIKEG------FRMLSPEHAPAEMYDIMKTCW-DADPLKRPTFKQIVQLIEKQ  305 (311)
T ss_dssp             --HHHHHHHHT------CCCCCCTTSCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHH
T ss_pred             --HHHHHHhcC------CCCCCcccccHHHHHHHHHHc-CCChhHCcCHHHHHHHHHHh
Confidence              122222221      223334456678999999999 99999999999999999864

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.6e-30  Score=230.48  Aligned_cols=169  Identities=20%  Similarity=0.306  Sum_probs=133.4

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc------CCCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC
Q 045092           87 TNNFASENEISERGFGPVYRGLLA------DGKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  159 (307)
                      .++|.+.+.||+|+||.||+|.+.      +++.||||+++.. .......|.+|++++.+++|||||+++|+|......
T Consensus        19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~   98 (308)
T d1p4oa_          19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT   98 (308)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCce
Confidence            467888899999999999999853      3578999999754 334445799999999999999999999998765221


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        99 ~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~DFG  178 (308)
T d1p4oa_          99 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG  178 (308)
T ss_dssp             EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTT
T ss_pred             eEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceEEEeecc
Confidence                                                                                            


Q ss_pred             -------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCC-CCCcCCCccCcccHHHHHHHHHHhh
Q 045092          160 -------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGR-SNVICRTKEDKFYLLDWLGSYLKRA  219 (307)
Q Consensus       160 -------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~-~p~~~~~~~~~~~l~~~~~~~~~~~  219 (307)
                                         |+.|+|||.+.++.++.++|||||||++|||+||. .|+....      ..+.. ..+..+
T Consensus       179 la~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~------~~~~~-~~i~~~  251 (308)
T d1p4oa_         179 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS------NEQVL-RFVMEG  251 (308)
T ss_dssp             CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC------HHHHH-HHHHTT
T ss_pred             cceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCC------HHHHH-HHHHhC
Confidence                               78899999999999999999999999999999985 6664322      11211 122222


Q ss_pred             hhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccccc
Q 045092          220 RKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKAE  269 (307)
Q Consensus       220 ~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~~  269 (307)
                            ..+..+..++..+.+++..|| +.||.+||||.+|+++|+...+
T Consensus       252 ------~~~~~p~~~~~~l~~li~~cl-~~~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         252 ------GLLDKPDNCPDMLFELMRMCW-QYNPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             ------CCCCCCTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHGGGSC
T ss_pred             ------CCCCCcccchHHHHHHHHHHc-CCChhHCcCHHHHHHHHHHhcC
Confidence                  223344566778999999999 9999999999999999987644

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.5e-30  Score=230.31  Aligned_cols=175  Identities=17%  Similarity=0.231  Sum_probs=129.4

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC-ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK-SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      .++|+..+.||+|+||+||+|.. .+|+.||||+++.. .......+.+|+.+|++++|||||+++++|.+....     
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE   84 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   84 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            57899999999999999999995 47899999998754 333456899999999999999999999998775211     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        85 y~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~  164 (322)
T d1s9ja_          85 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV  164 (322)
T ss_dssp             CCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC---C
T ss_pred             cCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCcccccc
Confidence                                                                                            


Q ss_pred             -CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHH-HH------------------HHH---
Q 045092          160 -PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDW-LG------------------SYL---  216 (307)
Q Consensus       160 -t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~-~~------------------~~~---  216 (307)
                       |+.|+|||++.+..|+.++||||+||++|||++|+.||.............. ..                  ...   
T Consensus       165 GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (322)
T d1s9ja_         165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDS  244 (322)
T ss_dssp             CSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-----------------------------
T ss_pred             CCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccccccccccc
Confidence             9999999999999999999999999999999999999965332211000000 00                  000   


Q ss_pred             -------HhhhhhcccccCCCc-hhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          217 -------KRARKLNGASCSKFG-FKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       217 -------~~~~~~~~~~~~~l~-~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                             ...........+.++ ...+.++.+++.+|+ +.||.+|||++|+++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L-~~dP~~R~ta~e~L~  297 (322)
T d1s9ja_         245 RPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCL-IKNPAERADLKQLMV  297 (322)
T ss_dssp             -CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHT-CSSTTTSCCHHHHHT
T ss_pred             ccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHc-CCChhHCcCHHHHhh
Confidence                   000000111112222 224558899999999 999999999999986

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.5e-30  Score=229.66  Aligned_cols=168  Identities=23%  Similarity=0.296  Sum_probs=127.9

Q ss_pred             hcCcccCCcccCCCCeeEEEEEEc-C-------CCEEEEEEccCCC-hhcHHHHHHHHHHHhhC-CCCCccceeeeeecC
Q 045092           87 TNNFASENEISERGFGPVYRGLLA-D-------GKVIEVKQLSSKS-KQGNREIVNEIGMISAL-QHPNLVKLYRLCTET  156 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~~-~-------~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~  156 (307)
                      .++|.+.+.||+|+||.||+|+.. .       +..||||+++... .....++.+|+..+.++ +|||||+++|+|.+.
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~   91 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   91 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence            467888999999999999999842 2       2479999997543 34457899999999998 899999999998765


Q ss_pred             CCC-----------------------------------------------------------------------------
Q 045092          157 LKQ-----------------------------------------------------------------------------  159 (307)
Q Consensus       157 ~~~-----------------------------------------------------------------------------  159 (307)
                      ...                                                                             
T Consensus        92 ~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~  171 (299)
T d1fgka_          92 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED  171 (299)
T ss_dssp             SSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT
T ss_pred             CeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecCC
Confidence            211                                                                             


Q ss_pred             ----------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHh-CCCCCcCCCccCcccHHH
Q 045092          160 ----------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIES-GRSNVICRTKEDKFYLLD  210 (307)
Q Consensus       160 ----------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~ellt-g~~p~~~~~~~~~~~l~~  210 (307)
                                                  |+.|+|||.+.++.|+.++|||||||++|||++ |+.||.....       .
T Consensus       172 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~-------~  244 (299)
T d1fgka_         172 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-------E  244 (299)
T ss_dssp             CCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-------H
T ss_pred             CCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCH-------H
Confidence                                        778999999999999999999999999999998 6888753221       1


Q ss_pred             HHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          211 WLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      .+...+..      ...+..+..++..+.+++.+|| +.||.+|||+.||++.|+.+.
T Consensus       245 ~~~~~i~~------~~~~~~p~~~~~~l~~li~~cl-~~dP~~Rps~~eil~~L~~i~  295 (299)
T d1fgka_         245 ELFKLLKE------GHRMDKPSNCTNELYMMMRDCW-HAVPSQRPTFKQLVEDLDRIV  295 (299)
T ss_dssp             HHHHHHHT------TCCCCCCSSCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHc------CCCCCCCccchHHHHHHHHHHc-cCCHhHCcCHHHHHHHHHHHh
Confidence            12222222      2233444556778999999999 999999999999999998764

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.96  E-value=1.3e-29  Score=229.84  Aligned_cols=166  Identities=19%  Similarity=0.221  Sum_probs=132.8

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      .++|++.+.||+|+||.||+|.. .+|+.||||+++.........+.+|+.+|++++|||||++++++.+....      
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  107 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  107 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            46799999999999999999995 47999999999776655667889999999999999999999998765210      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       108 ~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~~  187 (352)
T d1koba_         108 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV  187 (352)
T ss_dssp             CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEE
T ss_pred             CCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCCCceee
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 ---PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 ---t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                         |+.|||||++.+..++.++||||+||++|||++|+.||.....      .+.+.. +..+   ............+.
T Consensus       188 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~------~~~~~~-i~~~---~~~~~~~~~~~~s~  257 (352)
T d1koba_         188 TTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD------LETLQN-VKRC---DWEFDEDAFSSVSP  257 (352)
T ss_dssp             ECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHH-HHHC---CCCCCSSTTTTSCH
T ss_pred             ccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH------HHHHHH-HHhC---CCCCCcccccCCCH
Confidence               8899999999999999999999999999999999999964321      111111 1111   11122233345667


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ++.+++..|+ +.||.+|||+.|+++.
T Consensus       258 ~~~~li~~~L-~~dp~~R~s~~eil~H  283 (352)
T d1koba_         258 EAKDFIKNLL-QKEPRKRLTVHDALEH  283 (352)
T ss_dssp             HHHHHHHTTS-CSSGGGSCCHHHHHTS
T ss_pred             HHHHHHHHHc-cCChhHCcCHHHHhcC
Confidence            8999999999 9999999999999874

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.8e-30  Score=230.33  Aligned_cols=167  Identities=24%  Similarity=0.328  Sum_probs=129.1

Q ss_pred             cCcccCCcccCCCCeeEEEEEEc-CCC--EEEEEEccCC-ChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCCC---
Q 045092           88 NNFASENEISERGFGPVYRGLLA-DGK--VIEVKQLSSK-SKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~--~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~---  159 (307)
                      ++|+..+.||+|+||.||+|.+. ++.  .||||+++.. .....+.|.+|+++|.++ +|||||+++|+|.+....   
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            67888899999999999999964 444  5788887643 334456899999999999 799999999998765210   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~  169 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA  169 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEEC
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCCceEEc
Confidence                                                                                            


Q ss_pred             -------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCC-CCcCCCccCcccHHHHHHHHHHhh
Q 045092          160 -------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRS-NVICRTKEDKFYLLDWLGSYLKRA  219 (307)
Q Consensus       160 -------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~-p~~~~~~~~~~~l~~~~~~~~~~~  219 (307)
                                         |..|+|||.+.++.++.++|||||||++|||++|.. ||....   .   .+ +...    
T Consensus       170 DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~---~---~~-~~~~----  238 (309)
T d1fvra_         170 DFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT---C---AE-LYEK----  238 (309)
T ss_dssp             CTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC---H---HH-HHHH----
T ss_pred             cccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCC---H---HH-HHHH----
Confidence                               889999999999999999999999999999999765 564222   1   11 1111    


Q ss_pred             hhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          220 RKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       220 ~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                        +.....+..+..++.++.+++.+|| +.||++||+|.+|++.|+.+.
T Consensus       239 --i~~~~~~~~~~~~~~~~~~li~~cl-~~dP~~RPs~~eil~~L~~i~  284 (309)
T d1fvra_         239 --LPQGYRLEKPLNCDDEVYDLMRQCW-REKPYERPSFAQILVSLNRML  284 (309)
T ss_dssp             --GGGTCCCCCCTTBCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             --HHhcCCCCCCccCCHHHHHHHHHHc-CCChhHCcCHHHHHHHHHHHH
Confidence              2222344555667789999999999 999999999999999988754

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=2.7e-29  Score=224.57  Aligned_cols=162  Identities=17%  Similarity=0.184  Sum_probs=128.6

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      .++|++.+.||+|+||.||+|+. .+|+.||||+++..   .....+.+.+|+.+|++++|||||++++++.+....   
T Consensus         3 l~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv   82 (316)
T d1fota_           3 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   82 (316)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeE
Confidence            36799999999999999999995 47999999998643   223456899999999999999999999998765211   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        83 mE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~  162 (316)
T d1fota_          83 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLC  162 (316)
T ss_dssp             ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCC
T ss_pred             eeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEecccccccc
Confidence                                                                                            


Q ss_pred             -CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHH
Q 045092          160 -PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRT  238 (307)
Q Consensus       160 -t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  238 (307)
                       |+.|||||.+.+..++.++||||+||++|||++|+.||.....      .+.... +..+       ...++...+.++
T Consensus       163 Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~------~~~~~~-i~~~-------~~~~p~~~s~~~  228 (316)
T d1fota_         163 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT------MKTYEK-ILNA-------ELRFPPFFNEDV  228 (316)
T ss_dssp             SCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHH-HHHC-------CCCCCTTSCHHH
T ss_pred             CcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCH------HHHHHH-HHcC-------CCCCCCCCCHHH
Confidence             8899999999998999999999999999999999999964321      111111 1111       123334566688


Q ss_pred             HHHhccccCCCCCCCCC-----CHHHHHHH
Q 045092          239 SDGNDQCSSSVTPTNRP-----LMSFVVSM  263 (307)
Q Consensus       239 ~~l~~~C~~~~dP~~RP-----s~~~vl~~  263 (307)
                      .+++.+|+ ..||.+||     +++++++.
T Consensus       229 ~~li~~~L-~~dp~~R~~~~r~t~~~il~H  257 (316)
T d1fota_         229 KDLLSRLI-TRDLSQRLGNLQNGTEDVKNH  257 (316)
T ss_dssp             HHHHHHHT-CSCTTTCTTSSTTTTHHHHTS
T ss_pred             HHHHHHHh-hhCHHhccccchhhHHHHHcC
Confidence            99999999 99999996     89998753

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=6.9e-29  Score=220.14  Aligned_cols=175  Identities=21%  Similarity=0.252  Sum_probs=131.9

Q ss_pred             HHHHHHHhcCcccCCcccCCCCeeEEEEEEc------CCCEEEEEEccCC-ChhcHHHHHHHHHHHhhC-CCCCccceee
Q 045092           80 LRQIKAATNNFASENEISERGFGPVYRGLLA------DGKVIEVKQLSSK-SKQGNREIVNEIGMISAL-QHPNLVKLYR  151 (307)
Q Consensus        80 ~~el~~~t~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g  151 (307)
                      ..+++...++|+..+.||+|+||.||+|...      +++.||||+++.. .....+.+.+|+.++.++ +|+||+++++
T Consensus         5 ~~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~   84 (299)
T d1ywna1           5 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG   84 (299)
T ss_dssp             HHHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             CccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeee
Confidence            3444445678999999999999999999843      3468999999754 334456788899888887 7899999998


Q ss_pred             eeecCCCC------------------------------------------------------------------------
Q 045092          152 LCTETLKQ------------------------------------------------------------------------  159 (307)
Q Consensus       152 ~~~~~~~~------------------------------------------------------------------------  159 (307)
                      ++......                                                                        
T Consensus        85 ~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~N  164 (299)
T d1ywna1          85 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN  164 (299)
T ss_dssp             EECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             eeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccc
Confidence            87543110                                                                        


Q ss_pred             ----------------------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCC-CCCcCCCccC
Q 045092          160 ----------------------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGR-SNVICRTKED  204 (307)
Q Consensus       160 ----------------------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~-~p~~~~~~~~  204 (307)
                                                        |+.|||||.+.++.++.++|||||||++|||++|. .||.......
T Consensus       165 ILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~  244 (299)
T d1ywna1         165 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE  244 (299)
T ss_dssp             EEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH
T ss_pred             eeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHH
Confidence                                              77899999999999999999999999999999975 5664322111


Q ss_pred             cccHHHHHHHHHHhhhhhcccccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          205 KFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       205 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                            .+...+..+      ..+..+..++.++.+++..|| +.||++|||+.||+++|+++
T Consensus       245 ------~~~~~~~~~------~~~~~~~~~~~~l~~li~~cl-~~dP~~Rpt~~eil~~L~~i  294 (299)
T d1ywna1         245 ------EFCRRLKEG------TRMRAPDYTTPEMYQTMLDCW-HGEPSQRPTFSELVEHLGNL  294 (299)
T ss_dssp             ------HHHHHHHHT------CCCCCCTTCCHHHHHHHHHHT-CSSGGGSCCHHHHHHHHHHH
T ss_pred             ------HHHHHHhcC------CCCCCCccCCHHHHHHHHHHc-CCChhHCcCHHHHHHHHHHH
Confidence                  122222222      234445566778999999999 99999999999999999875

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=7.9e-29  Score=223.27  Aligned_cols=161  Identities=19%  Similarity=0.182  Sum_probs=129.5

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC---
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  159 (307)
                      .++|+..+.||+|+||.||+|+. .+|+.||||+++..   .....+.+.+|+.+|++++|||||++++++.+....   
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv   83 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence            46899999999999999999995 58999999998643   223457789999999999999999999988775211   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        84 ~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~~  163 (337)
T d1o6la_          84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK  163 (337)
T ss_dssp             EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBC
T ss_pred             eeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeecccccccccCCcccc
Confidence                                                                                            


Q ss_pred             ----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhH
Q 045092          160 ----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFY  235 (307)
Q Consensus       160 ----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  235 (307)
                          |+.|||||++.+..|+.++||||+||++|||++|+.||......      . +...+..+       ...++..++
T Consensus       164 ~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~------~-~~~~i~~~-------~~~~p~~~s  229 (337)
T d1o6la_         164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------R-LFELILME-------EIRFPRTLS  229 (337)
T ss_dssp             CCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------H-HHHHHHHC-------CCCCCTTSC
T ss_pred             cceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHH------H-HHHHHhcC-------CCCCCccCC
Confidence                89999999999999999999999999999999999999643321      1 11112111       133445667


Q ss_pred             HHHHHHhccccCCCCCCCCCC-----HHHHHH
Q 045092          236 RRTSDGNDQCSSSVTPTNRPL-----MSFVVS  262 (307)
Q Consensus       236 ~~~~~l~~~C~~~~dP~~RPs-----~~~vl~  262 (307)
                      .++.+++..|+ +.||.+||+     +.++++
T Consensus       230 ~~~~dli~~~L-~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         230 PEAKSLLAGLL-KKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HHHHHHHHHHT-CSSTTTSTTCSTTTHHHHHT
T ss_pred             HHHHHHHHhhc-cCCchhhcccccccHHHHHc
Confidence            78999999999 999999995     778765

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=9.1e-29  Score=219.88  Aligned_cols=171  Identities=19%  Similarity=0.184  Sum_probs=122.2

Q ss_pred             cCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCChhcHHHHHH--HHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           88 NNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKSKQGNREIVN--EIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~--E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      .+|.+.+.||+|+||.||+|+. +|+.||||+++...   .+.+.+  |+..+.+++|||||+++|+|.+....      
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~l   78 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEE
Confidence            3566778999999999999997 58899999986432   234444  45555678999999999999764211      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        79 v~Ey~~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~  158 (303)
T d1vjya_          79 VSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH  158 (303)
T ss_dssp             EEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred             EEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccc
Confidence                                                                                            


Q ss_pred             ----------------CccccchhhhccC------CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcc--------cHH
Q 045092          160 ----------------PIVYMAPEYAKHG------YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKF--------YLL  209 (307)
Q Consensus       160 ----------------t~~y~aPE~~~~~------~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~--------~l~  209 (307)
                                      |+.|||||++.+.      .++.++|||||||+||||+||..|+.........        ...
T Consensus       159 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~  238 (303)
T d1vjya_         159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV  238 (303)
T ss_dssp             ETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred             cCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchH
Confidence                            8999999998754      2677999999999999999998887432211110        011


Q ss_pred             HHHHHHHHhhhhhcccccCCCchh-----hHHHHHHHhccccCCCCCCCCCCHHHHHHHhcccc
Q 045092          210 DWLGSYLKRARKLNGASCSKFGFK-----FYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDKA  268 (307)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~~  268 (307)
                      .......     ......|.++..     ....+.+++.+|| +.||++||||.||++.|+.+.
T Consensus       239 ~~~~~~~-----~~~~~~p~~~~~~~~~~~~~~l~~li~~cl-~~dp~~Rps~~ei~~~L~~i~  296 (303)
T d1vjya_         239 EEMRKVV-----CEQKLRPNIPNRWQSCEALRVMAKIMRECW-YANGAARLTALRIKKTLSQLS  296 (303)
T ss_dssp             HHHHHHH-----TTSCCCCCCCGGGGGCHHHHHHHHHHHTTC-CSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHH-----hccccCCCCCcccCChHHHHHHHHHHHHHc-ccCHhHCcCHHHHHHHHHHHH
Confidence            1112211     223334444332     2346889999999 999999999999999988654

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=1.1e-28  Score=223.63  Aligned_cols=160  Identities=17%  Similarity=0.176  Sum_probs=127.4

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC---ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK---SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      ++|++.+.||+|+||.||+|.. .+|+.||||++...   .....+.+.+|+.+|+.++|||||++++++.+....    
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            5799999999999999999995 47999999998643   223456789999999999999999999988765211    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       121 e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~~~~G  200 (350)
T d1rdqe_         121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCG  200 (350)
T ss_dssp             ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEE
T ss_pred             ccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeecccccccccC
Confidence                                                                                            


Q ss_pred             CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHHHHH
Q 045092          160 PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYRRTS  239 (307)
Q Consensus       160 t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  239 (307)
                      |+.|||||++.+..++.++|||||||++|||++|+.||.....      .. +...+..+       .+..+..++.++.
T Consensus       201 t~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~------~~-~~~~i~~~-------~~~~p~~~s~~~~  266 (350)
T d1rdqe_         201 TPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP------IQ-IYEKIVSG-------KVRFPSHFSSDLK  266 (350)
T ss_dssp             CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HH-HHHHHHHC-------CCCCCTTCCHHHH
T ss_pred             ccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCH------HH-HHHHHhcC-------CCCCCccCCHHHH
Confidence            8999999999999999999999999999999999999964321      11 11111111       1233445667899


Q ss_pred             HHhccccCCCCCCCCC-----CHHHHHH
Q 045092          240 DGNDQCSSSVTPTNRP-----LMSFVVS  262 (307)
Q Consensus       240 ~l~~~C~~~~dP~~RP-----s~~~vl~  262 (307)
                      +++..|+ +.||.+|+     +++++++
T Consensus       267 ~li~~~L-~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         267 DLLRNLL-QVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             HHHHHHS-CSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHHHh-hhCHHhccccccccHHHHHc
Confidence            9999999 99999994     8999875

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.95  E-value=1.6e-28  Score=223.54  Aligned_cols=164  Identities=23%  Similarity=0.235  Sum_probs=123.7

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC---hhcHHHHHH---HHHHHhhCCCCCccceeeeeecCCCC
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS---KQGNREIVN---EIGMISALQHPNLVKLYRLCTETLKQ  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~---E~~~l~~l~h~niv~l~g~~~~~~~~  159 (307)
                      .++|++.+.||+|+||.||+|.. .+|+.||||++....   ......+.+   |+++++.++|||||++++++.+....
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~   82 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL   82 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence            47899999999999999999995 479999999985321   122233444   46777788999999999988765211


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        83 ~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~~  162 (364)
T d1omwa3          83 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP  162 (364)
T ss_dssp             EEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSSCC
T ss_pred             EEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeecCCCcc
Confidence                                                                                            


Q ss_pred             -----CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchh
Q 045092          160 -----PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFK  233 (307)
Q Consensus       160 -----t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  233 (307)
                           |+.|||||++..+ .++.++|||||||++|||+||+.||..........+       ..    ......+.++..
T Consensus       163 ~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~-------~~----~~~~~~~~~~~~  231 (364)
T d1omwa3         163 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI-------DR----MTLTMAVELPDS  231 (364)
T ss_dssp             CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHH-------HH----HSSSCCCCCCSS
T ss_pred             cccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHH-------HH----hcccCCCCCCCC
Confidence                 9999999999755 589999999999999999999999975443221111       11    111222334455


Q ss_pred             hHHHHHHHhccccCCCCCCCCCC-----HHHHHH
Q 045092          234 FYRRTSDGNDQCSSSVTPTNRPL-----MSFVVS  262 (307)
Q Consensus       234 ~~~~~~~l~~~C~~~~dP~~RPs-----~~~vl~  262 (307)
                      ++.++.+++..|+ +.||.+||+     ++++++
T Consensus       232 ~s~~~~~li~~~L-~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         232 FSPELRSLLEGLL-QRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             SCHHHHHHHHHHT-CSSTTTSTTTSSSTHHHHHT
T ss_pred             CCHHHHHHHHHHc-ccCHHHhCCCcccCHHHHHc
Confidence            6778999999999 999999999     578864

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.5e-29  Score=223.45  Aligned_cols=159  Identities=17%  Similarity=0.188  Sum_probs=125.4

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC---ChhcHHHHHHHHHHHh-hCCCCCccceeeeeecCCCC---
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK---SKQGNREIVNEIGMIS-ALQHPNLVKLYRLCTETLKQ---  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~-~l~h~niv~l~g~~~~~~~~---  159 (307)
                      ++|.+.+.||+|+||+||+|.. .+++.||||+++..   .....+.+..|+.++. .++|||||++++++.+....   
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            6799999999999999999995 47899999999643   1234456777877766 57999999999998876211   


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        82 mEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~~  161 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN  161 (320)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBC
T ss_pred             EeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhccccccccc
Confidence                                                                                            


Q ss_pred             ----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhH
Q 045092          160 ----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFY  235 (307)
Q Consensus       160 ----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  235 (307)
                          |+.|+|||.+.++.++.++|||||||++|||++|+.||......       .+...+..+       .+.++..++
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~-------~~~~~i~~~-------~~~~p~~~s  227 (320)
T d1xjda_         162 TFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE-------ELFHSIRMD-------NPFYPRWLE  227 (320)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHC-------CCCCCTTSC
T ss_pred             ccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHH-------HHHHHHHcC-------CCCCCccCC
Confidence                88999999999999999999999999999999999999643221       122222221       234445567


Q ss_pred             HHHHHHhccccCCCCCCCCCCHH-HHH
Q 045092          236 RRTSDGNDQCSSSVTPTNRPLMS-FVV  261 (307)
Q Consensus       236 ~~~~~l~~~C~~~~dP~~RPs~~-~vl  261 (307)
                      .++.+++.+|+ +.||.+||++. +++
T Consensus       228 ~~~~dli~~~L-~~dP~~R~s~~~~l~  253 (320)
T d1xjda_         228 KEAKDLLVKLF-VREPEKRLGVRGDIR  253 (320)
T ss_dssp             HHHHHHHHHHS-CSSGGGSBTTBSCGG
T ss_pred             HHHHHHHHHhc-ccCCCCCcCHHHHHH
Confidence            78999999999 99999999985 664

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.5e-28  Score=218.65  Aligned_cols=164  Identities=16%  Similarity=0.171  Sum_probs=128.0

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      .++|.+.+.||+|+||.||+|.. .+++.||||.++... .....+.+|+++|.+++|||||++++++.+....      
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~   82 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence            46799999999999999999995 478899999997653 3345688999999999999999999988765110      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        83 ~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~~  162 (321)
T d1tkia_          83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL  162 (321)
T ss_dssp             CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEE
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccCCcccc
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCCchhhHH
Q 045092          160 ---PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKFGFKFYR  236 (307)
Q Consensus       160 ---t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (307)
                         |+.|+|||.+.+..++.++||||+||++|||++|+.||.....      .+.... +..+.   ...+......++.
T Consensus       163 ~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~------~~~~~~-i~~~~---~~~~~~~~~~~s~  232 (321)
T d1tkia_         163 LFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN------QQIIEN-IMNAE---YTFDEEAFKEISI  232 (321)
T ss_dssp             EESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHH-HHHTC---CCCCHHHHTTSCH
T ss_pred             cccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCH------HHHHHH-HHhCC---CCCChhhccCCCH
Confidence               8899999999999999999999999999999999999964322      111111 11111   0111111123455


Q ss_pred             HHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          237 RTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       237 ~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ++.+++..|+ ..||.+|||+.|+++
T Consensus       233 ~~~~li~~~L-~~dp~~R~s~~eil~  257 (321)
T d1tkia_         233 EAMDFVDRLL-VKERKSRMTASEALQ  257 (321)
T ss_dssp             HHHHHHHTTS-CSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHc-cCChhHCcCHHHHhc
Confidence            7899999999 999999999999987

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.95  E-value=2.1e-28  Score=215.59  Aligned_cols=168  Identities=18%  Similarity=0.246  Sum_probs=126.2

Q ss_pred             cCcccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC------
Q 045092           88 NNFASENEISERGFGPVYRGLLADGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------  159 (307)
                      ++|+..+.||+|+||+||+|+..+|+.||||+++...  ....+.+.+|+.+|++++|||||++++++......      
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            6799999999999999999998889999999996543  22357899999999999999999999998876321      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        82 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~  161 (286)
T d1ob3a_          82 LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEI  161 (286)
T ss_dssp             CSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------
T ss_pred             ehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccCccccceec
Confidence                                                                                            


Q ss_pred             -Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHh-hh----------hhccc-
Q 045092          160 -PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKR-AR----------KLNGA-  225 (307)
Q Consensus       160 -t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~-~~----------~~~~~-  225 (307)
                       ++.|+|||.+.+ ..++.++|||||||+++||++|+.||......      +........ +.          ..... 
T Consensus       162 ~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~  235 (286)
T d1ob3a_         162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA------DQLMRIFRILGTPNSKNWPNVTELPKYD  235 (286)
T ss_dssp             CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred             ccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHH------HHHHHHHHhhCCCChhhccchhhhhhcc
Confidence             788999998875 45789999999999999999999999643211      111111110 00          00000 


Q ss_pred             -----cc----CCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          226 -----SC----SKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       226 -----~~----~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                           ..    .......+..+.+++..|+ +.||++|||++|+++
T Consensus       236 ~~~~~~~~~~~~~~~~~~s~~~~dli~~~L-~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         236 PNFTVYEPLPWESFLKGLDESGIDLLSKML-KLDPNQRITAKQALE  280 (286)
T ss_dssp             TTCCCCCCCCGGGTCCSCCHHHHHHHHHHT-CSSTTTSCCHHHHHT
T ss_pred             cccccccCcchhhhcccCCHHHHHHHHHHc-cCChhHCcCHHHHhc
Confidence                 00    0111223457889999999 999999999999974

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=8e-28  Score=213.17  Aligned_cols=173  Identities=20%  Similarity=0.255  Sum_probs=125.5

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC--hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS--KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      ++|+..+.||+|+||+||+|.. .+|+.||||+++...  ....+.+.+|+++|++++|||||++++++.+....     
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            6899999999999999999995 579999999996442  22356899999999999999999999998776211     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        82 ~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~~  161 (298)
T d1gz8a_          82 FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH  161 (298)
T ss_dssp             CCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTC
T ss_pred             ecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccCCccccee
Confidence                                                                                            


Q ss_pred             ---CccccchhhhccCC-CCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhccc----------
Q 045092          160 ---PIVYMAPEYAKHGY-LTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGA----------  225 (307)
Q Consensus       160 ---t~~y~aPE~~~~~~-~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----------  225 (307)
                         |+.|+|||.+.... ++.++||||+||++|||++|+.||......      +.+...........+.          
T Consensus       162 ~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~------~~~~~i~~~~~~~~~~~~~~~~~~~~  235 (298)
T d1gz8a_         162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------DQLFRIFRTLGTPDEVVWPGVTSMPD  235 (298)
T ss_dssp             CBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred             ecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHH------HHHHHHHHhcCCCchhhccccccccc
Confidence               89999999877654 578999999999999999999999643321      1111111110000000          


Q ss_pred             --------ccCC---CchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH--hccc
Q 045092          226 --------SCSK---FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM--LEDK  267 (307)
Q Consensus       226 --------~~~~---l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~--L~~~  267 (307)
                              ....   .....+.++.+++.+|+ +.||++|||+.|+++.  +++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL-~~dP~~R~t~~ell~H~ff~~~  289 (298)
T d1gz8a_         236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQML-HYDPNKRISAKAALAHPFFQDV  289 (298)
T ss_dssp             CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHT-CSSTTTSCCHHHHHTSGGGTTC
T ss_pred             cccccccccccchhhhccCCCHHHHHHHHHHc-cCChhHCcCHHHHhCCHhhccC
Confidence                    0000   00122347889999999 9999999999999874  5443

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.4e-28  Score=214.70  Aligned_cols=173  Identities=18%  Similarity=0.295  Sum_probs=121.8

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cC-CCEEEEEEccCCC--hhcHHHHHHHHHHHhhC---CCCCccceeeeeecCCC-
Q 045092           87 TNNFASENEISERGFGPVYRGLL-AD-GKVIEVKQLSSKS--KQGNREIVNEIGMISAL---QHPNLVKLYRLCTETLK-  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~-~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~g~~~~~~~-  158 (307)
                      -++|++.+.||+|+||.||+|.. .+ ++.||||+++...  ......+.+|+.+|+.+   +||||++++++|..... 
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            46899999999999999999995 34 5679999986432  22233566788777665   79999999998753200 


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~  165 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI  165 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCC
T ss_pred             cCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhhhhh
Confidence                                                                                            


Q ss_pred             -----------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhh--hh---
Q 045092          159 -----------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRAR--KL---  222 (307)
Q Consensus       159 -----------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~--~~---  222 (307)
                                 +|+.|+|||++.+..|+.++||||+||++|||++|+.||......+   ....+........  ..   
T Consensus       166 ~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~  242 (305)
T d1blxa_         166 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD---QLGKILDVIGLPGEEDWPRD  242 (305)
T ss_dssp             CCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCGGGSCTT
T ss_pred             hcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHH---HHHHHHHhhCCCchhccccc
Confidence                       0899999999999999999999999999999999999996433211   1111111110000  00   


Q ss_pred             --------ccc---ccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          223 --------NGA---SCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       223 --------~~~---~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                              ...   ..+.+....+..+.+++.+|+ +.||++|||+.|+++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL-~~dP~~R~sa~e~L~H  293 (305)
T d1blxa_         243 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCL-TFNPAKRISAYSALSH  293 (305)
T ss_dssp             CSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHS-CSSTTTSCCHHHHHTS
T ss_pred             ccchhhhhccccccchhhccccCCHHHHHHHHHHC-cCChhHCcCHHHHhcC
Confidence                    000   001112234457889999999 9999999999999763

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.4e-27  Score=211.53  Aligned_cols=166  Identities=16%  Similarity=0.140  Sum_probs=117.1

Q ss_pred             CCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChh-----cHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-------
Q 045092           93 ENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQ-----GNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-------  159 (307)
Q Consensus        93 ~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-------  159 (307)
                      .++||+|+||+||+|.. .+|+.||||+++.....     ..+.+.+|+.+|++++|||||++++++.+....       
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~   82 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM   82 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhh
Confidence            57899999999999995 47999999998644221     134689999999999999999999998776321       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        83 ~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~~~g  162 (299)
T d1ua2a_          83 ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVV  162 (299)
T ss_dssp             SEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCC
T ss_pred             cchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCCcccccceec
Confidence                                                                                            


Q ss_pred             CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhh--hhccc----------c
Q 045092          160 PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRAR--KLNGA----------S  226 (307)
Q Consensus       160 t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~----------~  226 (307)
                      |+.|+|||.+..+ .++.++|||||||++|||++|+.||......+   ....+...+....  .....          .
T Consensus       163 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~---~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (299)
T d1ua2a_         163 TRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD---QLTRIFETLGTPTEEQWPDMCSLPDYVTFKS  239 (299)
T ss_dssp             CCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHHHCCCCTTTSSSTTSSTTCCCCCC
T ss_pred             ChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHH---HHHHHHHhcCCCChhhccchhccchhhhhcc
Confidence            8899999998755 57999999999999999999999996433211   1111111110000  00000          0


Q ss_pred             cCCC-----chhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          227 CSKF-----GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       227 ~~~l-----~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      .+..     ....+..+.+++..|+ +.||++|||+.|+++
T Consensus       240 ~~~~~~~~~~~~~s~~~~dll~~~L-~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         240 FPGIPLHHIFSAAGDDLLDLIQGLF-LFNPCARITATQALK  279 (299)
T ss_dssp             CCCCCHHHHCTTCCHHHHHHHHHHH-CSSTTTSCCHHHHHT
T ss_pred             CCCCChHHhcccCCHHHHHHHHHHc-cCChhhCcCHHHHhC
Confidence            0000     1123457899999999 999999999999986

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=7.5e-29  Score=217.23  Aligned_cols=154  Identities=17%  Similarity=0.311  Sum_probs=121.3

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCCh------hcHHHHHHHHHHHhhCC--CCCccceeeeeecCCC
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSK------QGNREIVNEIGMISALQ--HPNLVKLYRLCTETLK  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~------~~~~~~~~E~~~l~~l~--h~niv~l~g~~~~~~~  158 (307)
                      ++|.+.+.||+|+||.||+|.. .+|+.||||++.....      .....+.+|+.+|++++  |||||++++++.+...
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            5799999999999999999995 5789999999864311      11234778999999986  8999999999876521


Q ss_pred             C-------------------------------------------------------------------------------
Q 045092          159 Q-------------------------------------------------------------------------------  159 (307)
Q Consensus       159 ~-------------------------------------------------------------------------------  159 (307)
                      .                                                                               
T Consensus        84 ~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~  163 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD  163 (273)
T ss_dssp             EEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCS
T ss_pred             EEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccceeccc
Confidence            1                                                                               


Q ss_pred             --------CccccchhhhccCCC-CchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccCCC
Q 045092          160 --------PIVYMAPEYAKHGYL-TDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCSKF  230 (307)
Q Consensus       160 --------t~~y~aPE~~~~~~~-~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l  230 (307)
                              |+.|+|||++.++.+ +.++||||+||++|||++|+.||....            . +..+   .    ..+
T Consensus       164 ~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~------------~-i~~~---~----~~~  223 (273)
T d1xwsa_         164 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------------E-IIRG---Q----VFF  223 (273)
T ss_dssp             SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------H-HHHC---C----CCC
T ss_pred             ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch------------H-Hhhc---c----cCC
Confidence                    889999999987765 567899999999999999999995311            0 1111   1    122


Q ss_pred             chhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          231 GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       231 ~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      +..++.++.+++.+|+ +.||++|||+.|+++
T Consensus       224 ~~~~s~~~~~li~~~L-~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         224 RQRVSSECQHLIRWCL-ALRPSDRPTFEEIQN  254 (273)
T ss_dssp             SSCCCHHHHHHHHHHT-CSSGGGSCCHHHHHT
T ss_pred             CCCCCHHHHHHHHHHc-cCCHhHCcCHHHHhc
Confidence            3345678999999999 999999999999976

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=8.5e-28  Score=214.72  Aligned_cols=173  Identities=15%  Similarity=0.191  Sum_probs=121.4

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  158 (307)
                      .++|++.+.||+|+||+||+|.. .+|+.||||++...  .......+.+|+.+|++++|+||+++++++.....     
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            36789999999999999999995 58999999998643  23345678999999999999999999988754210     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~  168 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS  168 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             CceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceeeecc
Confidence                                                                                            


Q ss_pred             --------------CCccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhh-hh
Q 045092          159 --------------QPIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRAR-KL  222 (307)
Q Consensus       159 --------------~t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~-~~  222 (307)
                                    +|+.|+|||.+.+. .++.++||||+||+++||++|+.||.......   ....+......-. ..
T Consensus       169 ~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~  245 (318)
T d3blha1         169 LAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH---QLALISQLCGSITPEV  245 (318)
T ss_dssp             C-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTT
T ss_pred             cccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHH---HHHHHHHhcCCCChhh
Confidence                          08899999998754 68999999999999999999999996432211   1111111110000 00


Q ss_pred             -cc------------c--ccCCCchh-----hHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          223 -NG------------A--SCSKFGFK-----FYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       223 -~~------------~--~~~~l~~~-----~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                       ..            .  ....+...     ....+.+++.+|+ +.||++|||+.|++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL-~~dP~~R~sa~elL~H  305 (318)
T d3blha1         246 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLL-VLDPAQRIDSDDALNH  305 (318)
T ss_dssp             STTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHS-CSSTTTSCCHHHHHHS
T ss_pred             ccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHC-cCChhHCcCHHHHHcC
Confidence             00            0  00000000     1225678999999 9999999999999864

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.94  E-value=8.9e-28  Score=212.85  Aligned_cols=171  Identities=15%  Similarity=0.155  Sum_probs=124.8

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCC--------
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLK--------  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~--------  158 (307)
                      +.|++.+.||+|+||.||+|.. .+|+.||||++.....  ..++..|+++++.++|+|++.+++.|.....        
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~   84 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   84 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence            4699999999999999999995 5789999998865432  2457889999999988877766655433210        


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        85 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~  164 (299)
T d1ckia_          85 LGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH  164 (299)
T ss_dssp             CCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCB
T ss_pred             cCCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccccccccc
Confidence                                                                                            


Q ss_pred             ----------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccC
Q 045092          159 ----------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCS  228 (307)
Q Consensus       159 ----------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  228 (307)
                                +|+.|||||.+.+..++.++|||||||++|||++|+.||.................    .  ......+
T Consensus       165 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~----~--~~~~~~~  238 (299)
T d1ckia_         165 IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE----K--KMSTPIE  238 (299)
T ss_dssp             CCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHH----H--HHHSCHH
T ss_pred             eeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhc----c--cCCCChh
Confidence                      18899999999998999999999999999999999999965443332211111100    0  0111112


Q ss_pred             CCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          229 KFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       229 ~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      .+...++.++.+++..|+ +.+|++||+++++.+.|+..
T Consensus       239 ~~~~~~p~~~~~li~~cl-~~~p~~RP~~~~i~~~l~~~  276 (299)
T d1ckia_         239 VLCKGYPSEFATYLNFCR-SLRFDDKPDYSYLRQLFRNL  276 (299)
T ss_dssp             HHTTTSCHHHHHHHHHHH-HSCTTCCCCHHHHHHHHHHH
T ss_pred             HhccCCCHHHHHHHHHHc-cCChhHCcCHHHHHHHHHHH
Confidence            223445668999999999 99999999999988877754

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.94  E-value=1.5e-27  Score=209.36  Aligned_cols=165  Identities=15%  Similarity=0.153  Sum_probs=125.6

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChh---------cHHHHHHHHHHHhhCC-CCCccceeeeeecC
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQ---------GNREIVNEIGMISALQ-HPNLVKLYRLCTET  156 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~---------~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~  156 (307)
                      ++|++.+.||+|+||+||+|+. .+|+.||||++......         ..+.+.+|+.++++++ |||||++++++.+.
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            6899999999999999999995 57899999998653211         1246889999999996 99999999999875


Q ss_pred             CCC-----------------------------------------------------------------------------
Q 045092          157 LKQ-----------------------------------------------------------------------------  159 (307)
Q Consensus       157 ~~~-----------------------------------------------------------------------------  159 (307)
                      ...                                                                             
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~  162 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP  162 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred             cceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchheeEccC
Confidence            211                                                                             


Q ss_pred             ---------Cccccchhhhcc------CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcc
Q 045092          160 ---------PIVYMAPEYAKH------GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNG  224 (307)
Q Consensus       160 ---------t~~y~aPE~~~~------~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  224 (307)
                               |+.|+|||++.+      ..++.++||||+||+++||++|+.||.....      .. ....+..+. . .
T Consensus       163 ~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~------~~-~~~~i~~~~-~-~  233 (277)
T d1phka_         163 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ------ML-MLRMIMSGN-Y-Q  233 (277)
T ss_dssp             TCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HH-HHHHHHHTC-C-C
T ss_pred             CCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCH------HH-HHHHHHhCC-C-C
Confidence                     789999998863      3468899999999999999999999964321      11 122222221 1 1


Q ss_pred             cccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          225 ASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       225 ~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                       ........++.++.+++.+|+ +.||.+||++.|+++.
T Consensus       234 -~~~~~~~~~s~~~~~li~~~L-~~~p~~R~s~~eil~h  270 (277)
T d1phka_         234 -FGSPEWDDYSDTVKDLVSRFL-VVQPQKRYTAEEALAH  270 (277)
T ss_dssp             -CCTTTGGGSCHHHHHHHHHHC-CSSGGGSCCHHHHTTS
T ss_pred             -CCCcccccCCHHHHHHHHHHc-cCChhHCcCHHHHHcC
Confidence             112222356678999999999 9999999999998653

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=4e-27  Score=212.83  Aligned_cols=178  Identities=14%  Similarity=0.179  Sum_probs=122.5

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      .+.|+..+.||+|+||+||+|.. .+|+.||||+++..  .....+.+.+|+++|++++|||||+++++|......    
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            46799999999999999999995 57999999999753  333456789999999999999999999988654210    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        97 ~~~lv~e~~~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~~~  176 (346)
T d1cm8a_          97 DFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMT  176 (346)
T ss_dssp             CCEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCC
T ss_pred             eEEEEEecccccHHHHHHhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccceeccCCccc
Confidence                                                                                            


Q ss_pred             ----Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHH-------HHH---------h
Q 045092          160 ----PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGS-------YLK---------R  218 (307)
Q Consensus       160 ----t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~-------~~~---------~  218 (307)
                          |+.|+|||.+.+ ..++.++||||+||+++||++|+.||........  +......       .+.         .
T Consensus       177 ~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (346)
T d1cm8a_         177 GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ--LKEIMKVTGTPPAEFVQRLQSDEAKNY  254 (346)
T ss_dssp             SSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCHHHHHTCSCHHHHHH
T ss_pred             cccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHH--HHHHHhccCCCcHHHHhhhcchhhhhh
Confidence                889999998876 4578999999999999999999999964332111  1000000       000         0


Q ss_pred             hhhhcccccC---CCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH--hccc
Q 045092          219 ARKLNGASCS---KFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM--LEDK  267 (307)
Q Consensus       219 ~~~~~~~~~~---~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~--L~~~  267 (307)
                      ...+......   .+....+..+.+++..|+ ..||.+|||+.|+++.  ++.+
T Consensus       255 ~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL-~~dP~~R~ta~eiL~Hp~f~~~  307 (346)
T d1cm8a_         255 MKGLPELEKKDFASILTNASPLAVNLLEKML-VLDAEQRVTAGEALAHPYFESL  307 (346)
T ss_dssp             HHHSCCCCCCCGGGTCTTCCHHHHHHHHHHS-CSSTTTSCCHHHHHHSGGGTTT
T ss_pred             hccCCcccccchHHhccCCCHHHHHHHHHHC-cCChhHCcCHHHHhcChhhCcC
Confidence            0001111111   111233457889999999 9999999999999874  5544

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.3e-27  Score=215.27  Aligned_cols=164  Identities=11%  Similarity=0.090  Sum_probs=120.9

Q ss_pred             hcCcccCC-cccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhC-CCCCccceeeeeecCCC-----
Q 045092           87 TNNFASEN-EISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISAL-QHPNLVKLYRLCTETLK-----  158 (307)
Q Consensus        87 t~~f~~~~-~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~-----  158 (307)
                      .++|.+.. .||+|+||.||+|.. .+++.||||+++..     ..+.+|+.++.++ +|||||++++++.+...     
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~   84 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL   84 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEE
Confidence            46888764 699999999999995 57899999998542     4677899987665 89999999998754200     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        85 ~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~  164 (335)
T d2ozaa1          85 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET  164 (335)
T ss_dssp             EEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred             EEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeeec
Confidence                                                                                            


Q ss_pred             ----------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccC
Q 045092          159 ----------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCS  228 (307)
Q Consensus       159 ----------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  228 (307)
                                +|+.|||||++.+..|+.++|||||||++|||+||+.||........   ...+...+.    ......+
T Consensus       165 ~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~---~~~~~~~i~----~~~~~~~  237 (335)
T d2ozaa1         165 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI---SPGMKTRIR----MGQYEFP  237 (335)
T ss_dssp             CCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC-----------CCC----SCSSSCC
T ss_pred             cCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHH---HHHHHHHHh----cCCCCCC
Confidence                      09999999999998999999999999999999999999964432221   110100000    0011111


Q ss_pred             -CCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          229 -KFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       229 -~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                       .....++.++.+++..|+ +.||++||++.|+++.
T Consensus       238 ~~~~~~~s~~~~~li~~~L-~~dP~~R~s~~eil~h  272 (335)
T d2ozaa1         238 NPEWSEVSEEVKMLIRNLL-KTEPTQRMTITEFMNH  272 (335)
T ss_dssp             TTHHHHSCHHHHHHHHHHS-CSSTTTSCCHHHHHHS
T ss_pred             CcccccCCHHHHHHHHHHc-cCChhHCcCHHHHHcC
Confidence             111234568999999999 9999999999999873

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2e-26  Score=209.00  Aligned_cols=176  Identities=14%  Similarity=0.157  Sum_probs=124.4

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      .+.|++.++||+|+||+||+|.. .+|+.||||++...  .......+.+|+.++++++|||||++++++......    
T Consensus        16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~   95 (355)
T d2b1pa1          16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ   95 (355)
T ss_dssp             ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCc
Confidence            46799999999999999999995 47999999999744  334456789999999999999999999988643110    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        96 ~~~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~~~  175 (355)
T d2b1pa1          96 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM  175 (355)
T ss_dssp             EEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC----------
T ss_pred             eeEEEEeccchHHHHhhhcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhcccccccc
Confidence                                                                                            


Q ss_pred             -----CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCccc-HH---------------HHHHHHHHh
Q 045092          160 -----PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFY-LL---------------DWLGSYLKR  218 (307)
Q Consensus       160 -----t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~-l~---------------~~~~~~~~~  218 (307)
                           |+.|+|||.+.+..++.++||||+||+++||++|+.||.......... +.               .........
T Consensus       176 ~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  255 (355)
T d2b1pa1         176 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN  255 (355)
T ss_dssp             -----CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHT
T ss_pred             ccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhc
Confidence                 899999999999999999999999999999999999995332111000 00               000000000


Q ss_pred             hhh---------hcccccCCC---chhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          219 ARK---------LNGASCSKF---GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       219 ~~~---------~~~~~~~~l---~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                      ...         ......+..   ....+..+.+++.+|+ ..||++|||++|+++.
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL-~~dP~~R~ta~elL~H  311 (355)
T d2b1pa1         256 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML-VIDPAKRISVDDALQH  311 (355)
T ss_dssp             SCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHS-CSSTTTSCCHHHHHTS
T ss_pred             CccccccccccccccccccccccccccCCHHHHHHHHHHC-cCChhHCcCHHHHhcC
Confidence            000         000000000   1123447889999999 9999999999999864

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.9e-26  Score=208.38  Aligned_cols=173  Identities=16%  Similarity=0.176  Sum_probs=121.7

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCC-hhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKS-KQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      +.+|...+.||+|+||+||+|.. .+|+.||||++.... ....+.+.+|+.+|++++||||+++++++......     
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence            45688999999999999999984 589999999996543 34456899999999999999999999988654210     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        87 ~l~~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~  166 (345)
T d1pmea_          87 YLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT  166 (345)
T ss_dssp             EEEEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBC
T ss_pred             EEEEeecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeeccCCCccc
Confidence                                                                                            


Q ss_pred             --------Cccccchhhhc-cCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHh------------
Q 045092          160 --------PIVYMAPEYAK-HGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKR------------  218 (307)
Q Consensus       160 --------t~~y~aPE~~~-~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~------------  218 (307)
                              |+.|+|||.+. +..++.++||||+||+++||++|+.||......+.   ..........            
T Consensus       167 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  243 (345)
T d1pmea_         167 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ---LNHILGILGSPSQEDLNCIINL  243 (345)
T ss_dssp             CTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCSCCHHHHHTCCCH
T ss_pred             eeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHH---HHHHhhhccCCChhhhhhhhhh
Confidence                    77899999885 45678999999999999999999999964332111   1100000000            


Q ss_pred             --hh---hhcccccC---CCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          219 --AR---KLNGASCS---KFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       219 --~~---~~~~~~~~---~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                        ..   ........   .+....+.++.+++..|+ +.||.+|||+.|+++.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L-~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         244 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML-TFNPHKRIEVEQALAH  295 (345)
T ss_dssp             HHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHS-CSSTTTSCCHHHHHTS
T ss_pred             hhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHc-cCChhHCcCHHHHhcC
Confidence              00   00000000   011123347889999999 9999999999999874

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.7e-26  Score=202.18  Aligned_cols=169  Identities=16%  Similarity=0.205  Sum_probs=124.6

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC-----
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ-----  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  159 (307)
                      ++|+..+.||+|+||+||+|+. .+++.||||+++..  .......+.+|+.+|+.++|+||+++++++.+....     
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            5799999999999999999995 57899999998643  233457899999999999999999999998776211     


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~~~  161 (292)
T d1unla_          82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAE  161 (292)
T ss_dssp             CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCCSC
T ss_pred             eccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCCCccceee
Confidence                                                                                            


Q ss_pred             --CccccchhhhccCC-CCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhh-----------hhccc
Q 045092          160 --PIVYMAPEYAKHGY-LTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRAR-----------KLNGA  225 (307)
Q Consensus       160 --t~~y~aPE~~~~~~-~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~-----------~~~~~  225 (307)
                        ++.|+|||.+.... ++.++||||+||+++||++|+.||.....     ..+..........           .....
T Consensus       162 ~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (292)
T d1unla_         162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND-----VDDQLKRIFRLLGTPTEEQWPSMTKLPDY  236 (292)
T ss_dssp             CSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS-----HHHHHHHHHHHHCCCCTTTCTTGGGSTTC
T ss_pred             ccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCC-----HHHHHHHHHhhcCCCChhhhhhhhhcccc
Confidence              77899999887654 68999999999999999999999753221     1121221111100           00000


Q ss_pred             ----------ccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          226 ----------SCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       226 ----------~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                                .........+..+.+++.+|+ +.||.+|||++|+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL-~~dP~~R~sa~e~L~  282 (292)
T d1unla_         237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLL-KCNPVQRISAEEALQ  282 (292)
T ss_dssp             CCCCCCCTTCCCTTTSTTCCHHHHHHHHHHS-CSSGGGSCCHHHHTT
T ss_pred             cccccccccchhhhccccCCHHHHHHHHHHc-cCChhHCcCHHHHhc
Confidence                      000111223447889999999 999999999999976

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.93  E-value=3.6e-26  Score=201.96  Aligned_cols=171  Identities=11%  Similarity=0.146  Sum_probs=127.5

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCC-CCccceeeeeecCCC-------
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQH-PNLVKLYRLCTETLK-------  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~g~~~~~~~-------  158 (307)
                      ++|.+.+.||+|+||.||+|.. .+|+.||||.+.....  ...+.+|++.+..+.| +|++.+++++.....       
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~   82 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL   82 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC--cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEe
Confidence            5799999999999999999995 4789999998865422  2457789999999965 899999887765411       


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          159 --------------------------------------------------------------------------------  158 (307)
Q Consensus       159 --------------------------------------------------------------------------------  158 (307)
                                                                                                      
T Consensus        83 ~~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~  162 (293)
T d1csna_          83 LGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTK  162 (293)
T ss_dssp             CCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTC
T ss_pred             cCCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCccc
Confidence                                                                                            


Q ss_pred             ------------CCccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccc
Q 045092          159 ------------QPIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGAS  226 (307)
Q Consensus       159 ------------~t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  226 (307)
                                  +|+.|||||.+.+..++.++|||||||++|||++|+.||.............   . +....  ....
T Consensus       163 ~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~---~-i~~~~--~~~~  236 (293)
T d1csna_         163 QHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYE---R-IGEKK--QSTP  236 (293)
T ss_dssp             CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHH---H-HHHHH--HHSC
T ss_pred             cceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHH---H-HHhcc--CCCC
Confidence                        1789999999999999999999999999999999999996544333211111   1 11111  0011


Q ss_pred             cCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHHhccc
Q 045092          227 CSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSMLEDK  267 (307)
Q Consensus       227 ~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~L~~~  267 (307)
                      .+.+...++.++.+++..|+ +.+|++||+++.+.+.|++.
T Consensus       237 ~~~l~~~~p~~l~~ii~~~~-~~~~~~rP~y~~l~~~l~~~  276 (293)
T d1csna_         237 LRELCAGFPEEFYKYMHYAR-NLAFDATPDYDYLQGLFSKV  276 (293)
T ss_dssp             HHHHTTTSCHHHHHHHHHHH-HCCTTCCCCHHHHHHHHHHH
T ss_pred             hHHhcCCCCHHHHHHHHHHh-cCCcccCcCHHHHHHHHHHH
Confidence            11222345568899999999 99999999998888777654

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4.1e-26  Score=206.11  Aligned_cols=172  Identities=16%  Similarity=0.199  Sum_probs=123.5

Q ss_pred             hcCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCC--ChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC----
Q 045092           87 TNNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSK--SKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ----  159 (307)
Q Consensus        87 t~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----  159 (307)
                      .++|++.+.||+|+||+||+|.. .+|+.||||+++..  +....+.+.+|+++|++++|+|||++++++......    
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            56799999999999999999994 57999999999754  233456789999999999999999999987532110    


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        97 ~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~~~  176 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT  176 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCTGGGS
T ss_pred             eEEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhcccCcccc
Confidence                                                                                            


Q ss_pred             ----CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhh--------------h
Q 045092          160 ----PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRA--------------R  220 (307)
Q Consensus       160 ----t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~--------------~  220 (307)
                          |+.|+|||...+. .++.++||||+||++|+|++|+.||.......   ....+.......              .
T Consensus       177 ~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~  253 (348)
T d2gfsa1         177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID---QLKLILRLVGTPGAELLKKISSESARN  253 (348)
T ss_dssp             SSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCHHHHTTCCCHHHHH
T ss_pred             cccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHH---HHHHHHHhcCCCChHHhhhccchhhhh
Confidence                7789999987664 56889999999999999999999996432211   111111100000              0


Q ss_pred             ---hhcccccCCC---chhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          221 ---KLNGASCSKF---GFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       221 ---~~~~~~~~~l---~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                         .........+   ....+..+.+++.+|+ ..||.+|||+.|+++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL-~~dP~~R~ta~elL~  300 (348)
T d2gfsa1         254 YIQSLTQMPKMNFANVFIGANPLAVDLLEKML-VLDSDKRITAAQALA  300 (348)
T ss_dssp             HHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHS-CSSGGGSCCHHHHHT
T ss_pred             hhhhcccCCCcchhhhcCCCCHHHHHHHHHHC-cCChhhCcCHHHHhc
Confidence               0000000000   1123447889999999 999999999999987

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.92  E-value=2.3e-25  Score=199.68  Aligned_cols=169  Identities=12%  Similarity=0.181  Sum_probs=123.1

Q ss_pred             cCcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCC-CCCccceeeeeecCCCC------
Q 045092           88 NNFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQ-HPNLVKLYRLCTETLKQ------  159 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~------  159 (307)
                      ++|++.+.||+|+||+||+|+. .+|+.||||+++..   ..+.+.+|+++|.+++ ||||+++++++......      
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~  111 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  111 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence            5899999999999999999995 57899999998653   3467899999999995 99999999988643211      


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus       112 e~~~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~~~~~  191 (328)
T d3bqca1         112 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVA  191 (328)
T ss_dssp             ECCCSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCCSCCS
T ss_pred             eecCCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccCCCccccccc
Confidence                                                                                            


Q ss_pred             CccccchhhhccC-CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHH---------HHhhh-----hhcc
Q 045092          160 PIVYMAPEYAKHG-YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSY---------LKRAR-----KLNG  224 (307)
Q Consensus       160 t~~y~aPE~~~~~-~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~---------~~~~~-----~~~~  224 (307)
                      |+.|+|||.+.+. .++.++||||+||+++||++|+.||........  ....+...         .....     ....
T Consensus       192 t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~--~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~  269 (328)
T d3bqca1         192 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD--QLVRIAKVLGTEDLYDYIDKYNIELDPRFND  269 (328)
T ss_dssp             CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHH--HHHHHHHHHCHHHHHHHHHHTTCCCCGGGGG
T ss_pred             CccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHH--HHHHHHHHHCCchhhhhhhhcccccCcccch
Confidence            8889999998765 479999999999999999999999964332111  11001100         00000     0000


Q ss_pred             ------------cccCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          225 ------------ASCSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       225 ------------~~~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                                  ..........+.++.+++.+|+ ..||.+|||++|+++
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL-~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         270 ILGRHSRKRWERFVHSENQHLVSPEALDFLDKLL-RYDHQSRLTAREAME  318 (328)
T ss_dssp             TCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHS-CSSGGGSCCHHHHHT
T ss_pred             hcccccccchhhcccccccccCCHHHHHHHHHHc-cCChhHCcCHHHHhc
Confidence                        0111111223457899999999 999999999999976

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4.5e-26  Score=203.95  Aligned_cols=164  Identities=18%  Similarity=0.228  Sum_probs=123.5

Q ss_pred             cCcccCCcccCCCCeeEEEEEE----cCCCEEEEEEccCCC----hhcHHHHHHHHHHHhhCCC-CCccceeeeeecCCC
Q 045092           88 NNFASENEISERGFGPVYRGLL----ADGKVIEVKQLSSKS----KQGNREIVNEIGMISALQH-PNLVKLYRLCTETLK  158 (307)
Q Consensus        88 ~~f~~~~~lG~G~~g~Vy~~~~----~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~h-~niv~l~g~~~~~~~  158 (307)
                      ++|+..+.||+|+||.||+|..    .+|+.||||.++...    ....+.+.+|+++|.+++| |||+++++++.+...
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            6799999999999999999984    257899999986431    2234578899999999966 899999998876521


Q ss_pred             C-------------------------------------------------------------------------------
Q 045092          159 Q-------------------------------------------------------------------------------  159 (307)
Q Consensus       159 ~-------------------------------------------------------------------------------  159 (307)
                      .                                                                               
T Consensus       104 ~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~  183 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE  183 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGG
T ss_pred             eeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccchhhhcccc
Confidence            1                                                                               


Q ss_pred             ---------CccccchhhhccC--CCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHHhhhhhcccccC
Q 045092          160 ---------PIVYMAPEYAKHG--YLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLKRARKLNGASCS  228 (307)
Q Consensus       160 ---------t~~y~aPE~~~~~--~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  228 (307)
                               ++.|++||.+.++  .++.++|||||||+||||++|+.||........  ... +.....       ...+
T Consensus       184 ~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~--~~~-i~~~~~-------~~~~  253 (322)
T d1vzoa_         184 TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS--QAE-ISRRIL-------KSEP  253 (322)
T ss_dssp             GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC--HHH-HHHHHH-------HCCC
T ss_pred             cccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH--HHH-HHHhcc-------cCCC
Confidence                     8899999988754  478899999999999999999999965443322  111 111111       1123


Q ss_pred             CCchhhHHHHHHHhccccCCCCCCCCCC-----HHHHHH
Q 045092          229 KFGFKFYRRTSDGNDQCSSSVTPTNRPL-----MSFVVS  262 (307)
Q Consensus       229 ~l~~~~~~~~~~l~~~C~~~~dP~~RPs-----~~~vl~  262 (307)
                      .++..++.++.+++.+|+ +.||.+||+     ++|+++
T Consensus       254 ~~~~~~s~~~~~li~~~l-~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         254 PYPQEMSALAKDLIQRLL-MKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             CCCTTSCHHHHHHHHHHT-CSSGGGSTTSSTTTHHHHHT
T ss_pred             CCcccCCHHHHHHHHHHc-ccCHHHcCCCCcccHHHHHc
Confidence            344567779999999999 999999994     788865

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.7e-25  Score=201.14  Aligned_cols=167  Identities=19%  Similarity=0.232  Sum_probs=118.3

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCCCCCccceeeeeecCCCC--------
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQHPNLVKLYRLCTETLKQ--------  159 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--------  159 (307)
                      +|...++||+|+||+||+|+. .+|+.||||++.....    .+.+|+++|++++|+||+++++++......        
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            467778999999999999995 4799999999865432    234799999999999999999887532100        


Q ss_pred             --------------------------------------------------------------------------------
Q 045092          160 --------------------------------------------------------------------------------  159 (307)
Q Consensus       160 --------------------------------------------------------------------------------  159 (307)
                                                                                                      
T Consensus        97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~  176 (350)
T d1q5ka_          97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG  176 (350)
T ss_dssp             EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTT
T ss_pred             EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhhccCC
Confidence                                                                                            


Q ss_pred             --------Cccccchhhhcc-CCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHH-------HHHHhhh-hh
Q 045092          160 --------PIVYMAPEYAKH-GYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLG-------SYLKRAR-KL  222 (307)
Q Consensus       160 --------t~~y~aPE~~~~-~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~-------~~~~~~~-~~  222 (307)
                              |..|+|||.+.+ ..++.++||||+||++|||++|+.||......+  .+.....       ..+.... ..
T Consensus       177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~--~l~~i~~~~g~~~~~~~~~~~~~~  254 (350)
T d1q5ka_         177 EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD--QLVEIIKVLGTPTREQIREMNPNY  254 (350)
T ss_dssp             SCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH--HHHHHHHHHCCCCHHHHHHHCC--
T ss_pred             cccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHH--HHHHHHHHhCCChHHhhhhhccch
Confidence                    889999998765 568999999999999999999999996433211  1111000       0000000 00


Q ss_pred             cccccCC---------CchhhHHHHHHHhccccCCCCCCCCCCHHHHHH
Q 045092          223 NGASCSK---------FGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVS  262 (307)
Q Consensus       223 ~~~~~~~---------l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~  262 (307)
                      ....-+.         .....+.++.+++.+|+ ..||++|||+.|+++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL-~~dP~~R~ta~e~L~  302 (350)
T d1q5ka_         255 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLL-EYTPTARLTPLEACA  302 (350)
T ss_dssp             -CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHS-CSSGGGSCCHHHHHT
T ss_pred             hhccccccccCchhhhcccCCCHHHHHHHHHHc-cCChhHCcCHHHHhc
Confidence            0110011         11223457899999999 999999999999986

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=3.8e-24  Score=193.84  Aligned_cols=173  Identities=14%  Similarity=0.094  Sum_probs=120.2

Q ss_pred             CcccCCcccCCCCeeEEEEEE-cCCCEEEEEEccCCChhcHHHHHHHHHHHhhCC-----------CCCccceeeeeecC
Q 045092           89 NFASENEISERGFGPVYRGLL-ADGKVIEVKQLSSKSKQGNREIVNEIGMISALQ-----------HPNLVKLYRLCTET  156 (307)
Q Consensus        89 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~g~~~~~  156 (307)
                      .|.+.++||+|+||+||+|+. .+|+.||||+++.. ....+.+.+|+++++.++           |+||+++++++...
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~-~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecc-ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            388999999999999999995 58999999999654 333467888999888775           57899998877542


Q ss_pred             CCC-----------------------------------------------------------------------------
Q 045092          157 LKQ-----------------------------------------------------------------------------  159 (307)
Q Consensus       157 ~~~-----------------------------------------------------------------------------  159 (307)
                      ...                                                                             
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~k  172 (362)
T d1q8ya_          93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIK  172 (362)
T ss_dssp             ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEE
T ss_pred             cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceee
Confidence            110                                                                             


Q ss_pred             -------------------CccccchhhhccCCCCchhHHHHHHHHHHHHHhCCCCCcCCCccCcccHHHHHHHHHH---
Q 045092          160 -------------------PIVYMAPEYAKHGYLTDKAEVCSFGIVTLEIESGRSNVICRTKEDKFYLLDWLGSYLK---  217 (307)
Q Consensus       160 -------------------t~~y~aPE~~~~~~~~~~sDV~s~Gvvl~elltg~~p~~~~~~~~~~~l~~~~~~~~~---  217 (307)
                                         |+.|+|||.+..+.++.++||||+||+++||++|+.||............+.+...+.   
T Consensus       173 l~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg  252 (362)
T d1q8ya_         173 IADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLG  252 (362)
T ss_dssp             ECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHC
T ss_pred             EeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhC
Confidence                               8899999999999999999999999999999999999964332221111111111110   


Q ss_pred             --------hhhh---------h----cccc----------cCCCchhhHHHHHHHhccccCCCCCCCCCCHHHHHHH
Q 045092          218 --------RARK---------L----NGAS----------CSKFGFKFYRRTSDGNDQCSSSVTPTNRPLMSFVVSM  263 (307)
Q Consensus       218 --------~~~~---------~----~~~~----------~~~l~~~~~~~~~~l~~~C~~~~dP~~RPs~~~vl~~  263 (307)
                              ....         .    ....          ........+..+.+++.+|+ ..||.+|||+.|++++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL-~~dP~~Rpta~e~L~H  328 (362)
T d1q8ya_         253 ELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPML-QLDPRKRADAGGLVNH  328 (362)
T ss_dssp             SCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGG-CSSTTTCBCHHHHHTC
T ss_pred             CCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHC-CCChhHCcCHHHHhcC
Confidence                    0000         0    0000          01112234457899999999 9999999999999864

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.31  E-value=3e-07  Score=73.90  Aligned_cols=63  Identities=19%  Similarity=0.064  Sum_probs=48.3

Q ss_pred             ccCCcccCCCCeeEEEEEEcCCCEEEEEEccCCCh------------------hcHHHHHHHHHHHhhCCCCCccceeee
Q 045092           91 ASENEISERGFGPVYRGLLADGKVIEVKQLSSKSK------------------QGNREIVNEIGMISALQHPNLVKLYRL  152 (307)
Q Consensus        91 ~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~------------------~~~~~~~~E~~~l~~l~h~niv~l~g~  152 (307)
                      .+++.||+|+||.||+|...+|+.||||.++....                  .......+|...+.++.|.+++..+++
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~   82 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW   82 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred             hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence            45689999999999999988899999998753210                  011235678899999999999998865


Q ss_pred             e
Q 045092          153 C  153 (307)
Q Consensus       153 ~  153 (307)
                      .
T Consensus        83 ~   83 (191)
T d1zara2          83 E   83 (191)
T ss_dssp             E
T ss_pred             c
Confidence            3

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.24  E-value=0.04  Score=45.58  Aligned_cols=36  Identities=25%  Similarity=0.356  Sum_probs=27.0

Q ss_pred             CHHHHHHH-----hcccccccccCeeeeeeeccCCceeecC
Q 045092          256 LMSFVVSM-----LEDKAEVCSFGIVTLEIESGRSNVICRT  291 (307)
Q Consensus       256 s~~~vl~~-----L~~~~~v~~~g~~~~e~~t~~~~~~~~~  291 (307)
                      .+-|++..     +...+|+||||++++|++||+.|+...+
T Consensus       173 ~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~  213 (276)
T d1uwha_         173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN  213 (276)
T ss_dssp             CCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             CCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCC
Confidence            34466532     3456799999999999999999986543