BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045097
(80 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SJF3|DCP1_ARATH mRNA-decapping enzyme-like protein OS=Arabidopsis thaliana
GN=At1g08370 PE=1 SV=2
Length = 367
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 72/80 (90%), Positives = 79/80 (98%)
Query: 1 MSQNGKLMPNLDQQSTKLLNLTVLQRIDPFIEEILITAAHVTFYEFNIDLSQWSRKDVEG 60
MSQNGK++PNLDQ ST+LLNLTVLQRIDP+IEEILITAAHVTFYEFNI+LSQWSRKDVEG
Sbjct: 1 MSQNGKIIPNLDQNSTRLLNLTVLQRIDPYIEEILITAAHVTFYEFNIELSQWSRKDVEG 60
Query: 61 SLFVVKRNTQPRFQFVVMNR 80
SLFVVKR+TQPRFQF+VMNR
Sbjct: 61 SLFVVKRSTQPRFQFIVMNR 80
>sp|Q3SZL6|DCP1B_BOVIN mRNA-decapping enzyme 1B OS=Bos taurus GN=DCP1B PE=2 SV=1
Length = 581
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 19 LNLTVLQRIDPFIEEILITAAHVTFYEFNIDLSQWSRKDVEGSLFVVKRNTQPRFQFVVM 78
++L L+R DP+I I+ A+ V Y F ++W + DVEG+LFV R+ P+ F +M
Sbjct: 14 ISLAALRRHDPYISRIVDVASQVALYTFGHRANEWEKTDVEGTLFVYSRSASPKHGFTIM 73
Query: 79 NR 80
NR
Sbjct: 74 NR 75
>sp|Q8IZD4|DCP1B_HUMAN mRNA-decapping enzyme 1B OS=Homo sapiens GN=DCP1B PE=1 SV=2
Length = 617
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 19 LNLTVLQRIDPFIEEILITAAHVTFYEFNIDLSQWSRKDVEGSLFVVKRNTQPRFQFVVM 78
++L LQR DP+I I+ A+ V Y F ++W + DVEG+LFV R+ P+ F +M
Sbjct: 16 ISLAALQRHDPYINRIVDVASQVALYTFGHRANEWEKTDVEGTLFVYTRSASPKHGFTIM 75
Query: 79 NR 80
NR
Sbjct: 76 NR 77
>sp|Q5R413|DCP1B_PONAB mRNA-decapping enzyme 1B OS=Pongo abelii GN=DCP1B PE=2 SV=1
Length = 609
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 19 LNLTVLQRIDPFIEEILITAAHVTFYEFNIDLSQWSRKDVEGSLFVVKRNTQPRFQFVVM 78
++L LQR DP+I I+ A+ V Y F ++W + DVEG+LFV R+ P+ F +M
Sbjct: 16 ISLAALQRHDPYINRIVDVASQVALYTFGHRANEWEKTDVEGTLFVYTRSASPKHGFTIM 75
Query: 79 NR 80
NR
Sbjct: 76 NR 77
>sp|Q3U564|DCP1B_MOUSE mRNA-decapping enzyme 1B OS=Mus musculus GN=Dcp1b PE=2 SV=1
Length = 578
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 19 LNLTVLQRIDPFIEEILITAAHVTFYEFNIDLSQWSRKDVEGSLFVVKRNTQPRFQFVVM 78
++L L+R DP+I I+ A+ V Y F ++W + VEG+LFV R+ P+ F +M
Sbjct: 16 ISLAALRRHDPYISRIVDVASQVALYTFGHRANEWEKTGVEGTLFVYTRSASPKHGFTIM 75
Query: 79 NR 80
NR
Sbjct: 76 NR 77
>sp|Q91YD3|DCP1A_MOUSE mRNA-decapping enzyme 1A OS=Mus musculus GN=Dcp1a PE=1 SV=1
Length = 602
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 19 LNLTVLQRIDPFIEEILITAAHVTFYEFNIDLSQWSRKDVEGSLFVVKRNTQPRFQFVVM 78
++L L++ DP+I I V Y F +QW + D+EG+LFV +R+ P F ++
Sbjct: 31 MSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRSASPYHGFTIV 90
Query: 79 NR 80
NR
Sbjct: 91 NR 92
>sp|Q9NPI6|DCP1A_HUMAN mRNA-decapping enzyme 1A OS=Homo sapiens GN=DCP1A PE=1 SV=2
Length = 582
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 19 LNLTVLQRIDPFIEEILITAAHVTFYEFNIDLSQWSRKDVEGSLFVVKRNTQPRFQFVVM 78
++L L++ DP+I I V Y F +QW + D+EG+LFV +R+ P F ++
Sbjct: 11 MSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRSASPYHGFTIV 70
Query: 79 NR 80
NR
Sbjct: 71 NR 72
>sp|Q9P805|DCP1_SCHPO mRNA-decapping enzyme subunit 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dcp1 PE=1 SV=1
Length = 127
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 19 LNLTVLQRIDPFIEEILITAAHVTFYEFNIDLSQWSRKDVEGSLFVVKRNTQPRFQFVVM 78
+NL VL+ P IE I+ A+HV Y+F++ +W + +EG+ F+VK + + R +V++
Sbjct: 11 VNLQVLKFHYPEIESIIDIASHVAVYQFDVGSQKWLKTSIEGTFFLVK-DQRARVGYVIL 69
Query: 79 NR 80
NR
Sbjct: 70 NR 71
>sp|Q74Z05|DCP1_ASHGO mRNA-decapping enzyme subunit 1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DCP1
PE=3 SV=1
Length = 193
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%)
Query: 17 KLLNLTVLQRIDPFIEEILITAAHVTFYEFNIDLSQWSRKDVEGSLFVVKRNTQPRFQFV 76
K LN V+ R DP I+++L H T Y++ ++W++ + +G L + R+ + + +
Sbjct: 17 KTLNFNVIGRYDPKIKQLLFHTPHATVYKWEAGENKWNKLEYQGVLAIYLRDVREQAELP 76
Query: 77 V 77
V
Sbjct: 77 V 77
>sp|Q12517|DCP1_YEAST mRNA-decapping enzyme subunit 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DCP1 PE=1 SV=1
Length = 231
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 30/52 (57%)
Query: 17 KLLNLTVLQRIDPFIEEILITAAHVTFYEFNIDLSQWSRKDVEGSLFVVKRN 68
K LN V+ R DP I+++L H + Y+++ +W++ + +G L + R+
Sbjct: 20 KALNFNVIGRYDPKIKQLLFHTPHASLYKWDFKKDEWNKLEYQGVLAIYLRD 71
>sp|A8AY51|EZRA_STRGC Septation ring formation regulator EzrA OS=Streptococcus gordonii
(strain Challis / ATCC 35105 / CH1 / DL1 / V288)
GN=ezrA PE=3 SV=1
Length = 574
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 3 QNGKLMPNLDQQSTKLLNLTVLQRIDPFIEEILITAAHVTFYEFN---IDLSQWSRKDVE 59
+N L+ +L+++ KL NL V ++ LI + VTF E+N +DLS S D+E
Sbjct: 29 RNETLLDSLEERKEKLYNLPVNDEVEAIKNMHLIGQSQVTFREWNQKWVDLSLNSFADIE 88
Query: 60 GSLF 63
++F
Sbjct: 89 NNIF 92
>sp|A3CMA0|EZRA_STRSV Septation ring formation regulator EzrA OS=Streptococcus
sanguinis (strain SK36) GN=ezrA PE=3 SV=1
Length = 574
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 3 QNGKLMPNLDQQSTKLLNLTVLQRIDPFIEEILITAAHVTFYEFN---IDLSQWSRKDVE 59
+N L+ NL+++ L NL V ++ LI + V F E+N +DLS S D+E
Sbjct: 29 RNEALLQNLEERKEALYNLPVNDEVEEVKNMHLIGQSQVAFREWNQKWVDLSLNSFADIE 88
Query: 60 GSLF 63
+LF
Sbjct: 89 NNLF 92
>sp|A4W2T8|EZRA_STRS2 Septation ring formation regulator EzrA OS=Streptococcus suis
(strain 98HAH33) GN=ezrA PE=3 SV=1
Length = 574
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 3 QNGKLMPNLDQQSTKLLNLTVLQRIDPFIEEILITAAHVTFYEFN---IDLSQWSRKDVE 59
+N L+ L+++ +L NL V + ++ LI + V+F E+N +DLS S D+E
Sbjct: 29 RNDNLLVALEERKEELFNLPVNEEVETVKALHLIGQSQVSFREWNQKWVDLSLNSFADIE 88
Query: 60 GSLF 63
+F
Sbjct: 89 NHIF 92
>sp|A4VWI6|EZRA_STRSY Septation ring formation regulator EzrA OS=Streptococcus suis
(strain 05ZYH33) GN=ezrA PE=3 SV=1
Length = 574
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 3 QNGKLMPNLDQQSTKLLNLTVLQRIDPFIEEILITAAHVTFYEFN---IDLSQWSRKDVE 59
+N L+ L+++ +L NL V + ++ LI + V+F E+N +DLS S D+E
Sbjct: 29 RNDNLLVALEERKEELFNLPVNEEVETVKALHLIGQSQVSFREWNQKWVDLSLNSFADIE 88
Query: 60 GSLF 63
+F
Sbjct: 89 NHIF 92
>sp|Q8DTQ3|EZRA_STRMU Septation ring formation regulator EzrA OS=Streptococcus mutans
serotype c (strain ATCC 700610 / UA159) GN=ezrA PE=3
SV=1
Length = 574
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 3 QNGKLMPNLDQQSTKLLNLTVLQRIDPFIEEILITAAHVTFYEFN---IDLSQWSRKDVE 59
+N L+ L+++ L +L V I+ + LI + TF E+N +DLS S D+E
Sbjct: 29 RNDSLITKLEERKQNLFDLPVNDEIEEVKKLHLIGQSQTTFREWNQKWVDLSLNSFSDIE 88
Query: 60 GSLFVVKRNTQPRFQFV 76
+F + N F F+
Sbjct: 89 NHIFEAE-NLNDTFNFI 104
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,138,148
Number of Sequences: 539616
Number of extensions: 845337
Number of successful extensions: 2104
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2092
Number of HSP's gapped (non-prelim): 21
length of query: 80
length of database: 191,569,459
effective HSP length: 51
effective length of query: 29
effective length of database: 164,049,043
effective search space: 4757422247
effective search space used: 4757422247
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 55 (25.8 bits)