BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>045101
MAQLVDKAKNYVTDKVTNMRKPEASLSKFRLKGVSREGVDYLADVSIDNPYSHSIPICEI
SYVLKSDGRVIATGTIPDPGSIKGNDKTVLNVPVKVPHSVLVSLVKDIARDWDIDYLLEV
GLIIDLPLIGNFTIPLSTQGEVKLPTLTDFFKN

High Scoring Gene Products

Symbol, full name Information P value
LEA14
AT1G01470
protein from Arabidopsis thaliana 6.9e-47
AT2G46140 protein from Arabidopsis thaliana 8.8e-47
AT2G44060 protein from Arabidopsis thaliana 1.9e-19

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  045101
        (153 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2025346 - symbol:LEA14 "AT1G01470" species:370...   491  6.9e-47   1
TAIR|locus:2062933 - symbol:AT2G46140 "AT2G46140" species...   490  8.8e-47   1
TAIR|locus:2051749 - symbol:AT2G44060 "AT2G44060" species...   232  1.9e-19   1


>TAIR|locus:2025346 [details] [associations]
            symbol:LEA14 "AT1G01470" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009269
            "response to desiccation" evidence=IEA;ISS] [GO:0009793 "embryo
            development ending in seed dormancy" evidence=ISS] [GO:0009644
            "response to high light intensity" evidence=IEP] [GO:0009611
            "response to wounding" evidence=IEP] [GO:0050832 "defense response
            to fungus" evidence=IEP] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0009409 "response to cold" evidence=RCA] [GO:0009414 "response
            to water deprivation" evidence=RCA] [GO:0009737 "response to
            abscisic acid stimulus" evidence=RCA] [GO:0010286 "heat
            acclimation" evidence=RCA] InterPro:IPR013990 SMART:SM00769
            InterPro:IPR004864 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0005829 Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:Y12776
            EMBL:AC061957 GO:GO:0009611 GO:GO:0050832 GO:GO:0009644
            GO:GO:0009269 EMBL:Y10085 EMBL:AY074855 EMBL:BT015111 EMBL:Z37258
            IPI:IPI00525938 PIR:D86145 RefSeq:NP_171654.1 UniGene:At.25113
            PDB:1XO8 PDBsum:1XO8 ProteinModelPortal:O03983 SMR:O03983
            IntAct:O03983 STRING:O03983 PaxDb:O03983 PRIDE:O03983 DNASU:837071
            EnsemblPlants:AT1G01470.1 GeneID:837071 KEGG:ath:AT1G01470
            TAIR:At1g01470 eggNOG:NOG271766 HOGENOM:HOG000237668
            InParanoid:O03983 OMA:RDSVEYL PhylomeDB:O03983
            ProtClustDB:CLSN2682861 EvolutionaryTrace:O03983
            Genevestigator:O03983 GermOnline:AT1G01470 Pfam:PF03168
            Uniprot:O03983
        Length = 151

 Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
 Identities = 89/151 (58%), Positives = 117/151 (77%)

Query:     1 MAQLVDKAKNYVTDKVTNMRKPEASLSKFRLKGVSREGVDYLADVSIDNPYSHSIPICEI 60
             MA L+DKAK++V DK+T + KPE S++   LK V+R+ V+YLA VS+ NPYSHSIPICEI
Sbjct:     1 MASLLDKAKDFVADKLTAIPKPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSIPICEI 60

Query:    61 SYVLKSDGRVIATGTIPDPGSIKGNDKTVLNVPVKVPHSVLVSLVKDIARDWDIDYLLEV 120
             S+   S GR I  G IPDPGS+K  D T L++PV VP+S+L +L +D+  DWDIDY L++
Sbjct:    61 SFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPVVVPYSILFNLARDVGVDWDIDYELQI 120

Query:   121 GLIIDLPLIGNFTIPLSTQGEVKLPTLTDFF 151
             GL IDLP++G FTIP+S++GE+KLPT  DFF
Sbjct:   121 GLTIDLPVVGEFTIPISSKGEIKLPTFKDFF 151


>TAIR|locus:2062933 [details] [associations]
            symbol:AT2G46140 "AT2G46140" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009269
            "response to desiccation" evidence=IEA;ISS] [GO:0009793 "embryo
            development ending in seed dormancy" evidence=ISS] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0048046 "apoplast" evidence=IDA] InterPro:IPR013990
            SMART:SM00769 InterPro:IPR004864 GO:GO:0005829 GO:GO:0005886
            Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0048046 EMBL:AC005397 GO:GO:0009269
            HOGENOM:HOG000237668 ProtClustDB:CLSN2682861 Pfam:PF03168
            EMBL:BT005673 EMBL:BT004206 EMBL:AY086763 IPI:IPI00531665
            PIR:B84899 RefSeq:NP_182137.1 UniGene:At.36550 PDB:1YYC PDBsum:1YYC
            ProteinModelPortal:O82355 SMR:O82355 PaxDb:O82355 PRIDE:O82355
            DNASU:819221 EnsemblPlants:AT2G46140.1 GeneID:819221
            KEGG:ath:AT2G46140 TAIR:At2g46140 eggNOG:NOG292167
            InParanoid:O82355 OMA:HRLPICE PhylomeDB:O82355
            EvolutionaryTrace:O82355 Genevestigator:O82355 GermOnline:AT2G46140
            Uniprot:O82355
        Length = 166

 Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
 Identities = 89/151 (58%), Positives = 120/151 (79%)

Query:     1 MAQLVDKAKNYVTDKVTNMRKPEASLSKFRLKGVSREGVDYLADVSIDNPYSHSIPICEI 60
             ++ L+DKAK +  +K+ N+  PEA++     KGV+R+GVDY A VS+ NPYS SIPIC+I
Sbjct:    16 ISSLLDKAKGFFAEKLANIPTPEATVDDVDFKGVTRDGVDYHAKVSVKNPYSQSIPICQI 75

Query:    61 SYVLKSDGRVIATGTIPDPGSIKGNDKTVLNVPVKVPHSVLVSLVKDIARDWDIDYLLEV 120
             SY+LKS  R IA+GTIPDPGS+ G+  TVL+VPVKV +S+ VSL+KD+  DWDIDY L++
Sbjct:    76 SYILKSATRTIASGTIPDPGSLVGSGTTVLDVPVKVAYSIAVSLMKDMCTDWDIDYQLDI 135

Query:   121 GLIIDLPLIGNFTIPLSTQGEVKLPTLTDFF 151
             GL  D+P++G+ TIP+STQGE+KLP+L DFF
Sbjct:   136 GLTFDIPVVGDITIPVSTQGEIKLPSLRDFF 166


>TAIR|locus:2051749 [details] [associations]
            symbol:AT2G44060 "AT2G44060" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0009269 "response to desiccation"
            evidence=IEA;ISS] [GO:0009793 "embryo development ending in seed
            dormancy" evidence=ISS] [GO:0046686 "response to cadmium ion"
            evidence=IEP;RCA] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794
            "Golgi apparatus" evidence=IDA] [GO:0000902 "cell morphogenesis"
            evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
            [GO:0006096 "glycolysis" evidence=RCA] [GO:0006970 "response to
            osmotic stress" evidence=RCA] [GO:0009651 "response to salt stress"
            evidence=RCA] [GO:0016049 "cell growth" evidence=RCA] [GO:0019344
            "cysteine biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
            vesicle transport" evidence=RCA] InterPro:IPR013990 SMART:SM00769
            InterPro:IPR004864 GO:GO:0005829 GO:GO:0005886 GO:GO:0009506
            GO:GO:0005794 GO:GO:0046686 Gene3D:2.60.40.10 InterPro:IPR013783
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009269 EMBL:AC004005
            Pfam:PF03168 EMBL:BT024723 IPI:IPI00538194 PIR:T00686
            RefSeq:NP_181934.1 RefSeq:NP_850408.1 UniGene:At.23563
            ProteinModelPortal:O80576 SMR:O80576 STRING:O80576 PaxDb:O80576
            PRIDE:O80576 ProMEX:O80576 DNASU:819011 EnsemblPlants:AT2G44060.1
            EnsemblPlants:AT2G44060.2 GeneID:819011 KEGG:ath:AT2G44060
            TAIR:At2g44060 eggNOG:NOG271585 HOGENOM:HOG000242248
            InParanoid:O80576 OMA:FIHDIGE PhylomeDB:O80576
            ProtClustDB:CLSN2683184 ArrayExpress:O80576 Genevestigator:O80576
            Uniprot:O80576
        Length = 325

 Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 47/151 (31%), Positives = 86/151 (56%)

Query:     5 VDKAKNYVTD---KVTN---MRKPEASLSKFRLKGVSREGVDYLADVSIDNPYSHSIPIC 58
             +DK K+++ D   K+       KP A +S   +  ++ E  D + DV + NP    IP+ 
Sbjct:    43 LDKVKDFIHDIGEKLEGTIGFGKPTADVSAIHIPKINLERADIVVDVLVKNPNPVPIPLI 102

Query:    59 EISYVLKSDGRVIATGTIPDPGSIKGNDKTVLNVPVKVPHSVLVSLVKDIARDWDIDYLL 118
             +++Y+++SDGR + +G IPD G++K + +  + +P+ + +  + S   DI     I Y +
Sbjct:   103 DVNYLVESDGRKLVSGLIPDAGTLKAHGEETVKIPLTLIYDDIKSTYNDINPGMIIPYRI 162

Query:   119 EVGLIIDLPLIGNFTIPLSTQGEVKLPTLTD 149
             +V LI+D+P++G  T+PL   GE+ +P   D
Sbjct:   163 KVDLIVDVPVLGRLTLPLEKCGEIPIPKKPD 193


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.138   0.396    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      153       153   0.00081  105 3  11 22  0.38    32
                                                     30  0.41    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  557 (59 KB)
  Total size of DFA:  128 KB (2082 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.15u 0.11s 14.26t   Elapsed:  00:00:00
  Total cpu time:  14.15u 0.11s 14.26t   Elapsed:  00:00:00
  Start:  Sat May 11 01:45:26 2013   End:  Sat May 11 01:45:26 2013

Back to top