Query 045101
Match_columns 153
No_of_seqs 117 out of 289
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 17:20:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045101.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045101hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yyc_A LEA protein, putative l 100.0 3.3E-52 1.1E-56 319.9 15.9 151 1-151 24-174 (174)
2 1xo8_A AT1G01470; structural g 100.0 5.6E-53 1.9E-57 317.8 9.2 151 1-151 1-151 (151)
3 3but_A Uncharacterized protein 99.9 4.3E-22 1.5E-26 147.1 15.1 113 24-137 3-116 (136)
4 3idu_A Uncharacterized protein 93.0 1.7 5.7E-05 30.8 11.0 84 19-123 14-97 (127)
5 2xzz_A Protein-glutamine gamma 91.0 0.21 7.3E-06 34.2 3.7 72 19-97 3-74 (102)
6 3cmg_A Putative beta-galactosi 88.5 2.6 8.8E-05 37.3 9.5 116 20-145 147-279 (667)
7 2l0d_A Cell surface protein; s 85.4 7.2 0.00025 27.0 10.4 85 21-124 2-86 (114)
8 1yq2_A Beta-galactosidase; gly 84.2 1.5 5.1E-05 41.1 5.8 49 44-93 625-678 (1024)
9 3fn9_A Putative beta-galactosi 80.5 8 0.00027 34.5 9.0 116 20-144 159-292 (692)
10 3mnm_A ADP-ribosylation factor 80.1 13 0.00043 25.9 9.6 92 40-147 32-123 (123)
11 1ex0_A Coagulation factor XIII 75.1 1.7 5.7E-05 39.4 2.9 82 11-99 619-700 (731)
12 1g0d_A Protein-glutamine gamma 70.4 1.3 4.4E-05 39.9 1.0 82 11-99 574-656 (695)
13 1jz7_A Lactase, beta-galactosi 70.1 6.1 0.00021 37.0 5.5 48 44-93 635-683 (1023)
14 4ay0_A Chaperone protein CAF1M 67.7 6 0.0002 30.4 4.2 41 44-94 149-189 (218)
15 3o0l_A Uncharacterized protein 66.6 25 0.00086 24.0 6.9 78 24-121 26-107 (112)
16 3bga_A Beta-galactosidase; NYS 65.0 8.9 0.0003 35.9 5.5 49 44-94 631-681 (1010)
17 3isy_A Bsupi, intracellular pr 65.0 32 0.0011 23.9 8.7 72 40-124 19-103 (120)
18 4djm_A DRAB; chaperone, PILI; 64.8 6.7 0.00023 30.5 4.0 41 44-93 171-211 (239)
19 2r39_A FIXG-related protein; s 63.7 18 0.0006 24.6 5.7 55 38-100 30-87 (118)
20 1vjj_A Protein-glutamine gluta 59.2 2.6 8.9E-05 38.0 0.8 79 11-96 583-662 (692)
21 2co7_B SAFB chaperone, putativ 56.5 8.3 0.00028 29.5 3.2 41 44-93 154-194 (221)
22 2jwy_A Uncharacterized lipopro 54.6 25 0.00085 26.0 5.3 55 23-84 65-125 (168)
23 3qbt_B Inositol polyphosphate 54.3 53 0.0018 23.0 7.6 79 14-99 17-103 (140)
24 2q3z_A Transglutaminase 2; tra 51.2 4.6 0.00016 36.3 1.0 82 11-99 576-659 (687)
25 2ia7_A Tail lysozyme, putative 47.9 44 0.0015 23.0 5.7 57 5-66 72-130 (134)
26 3zy7_A AP-1 complex subunit ga 44.2 74 0.0025 21.8 10.1 87 40-145 30-117 (122)
27 1l4i_A SFAE protein; periplasm 44.1 12 0.0004 28.3 2.2 40 44-93 139-178 (206)
28 1w8o_A Bacterial sialidase; 3D 41.9 45 0.0016 28.2 5.8 56 38-98 372-427 (601)
29 1klf_A FIMC chaperone, chapero 40.3 13 0.00046 28.0 2.0 40 44-93 139-178 (205)
30 2kdd_A Borealin; protein dimer 39.1 3.7 0.00013 26.4 -1.1 33 60-93 6-38 (76)
31 4gio_A Putative lipoprotein; u 35.5 71 0.0024 21.5 4.9 61 44-121 39-104 (107)
32 1gyu_A Adapter-related protein 35.0 1.2E+02 0.004 21.3 10.7 87 40-145 48-135 (140)
33 2xdh_A Cohesin; archaeal prote 34.3 62 0.0021 23.6 4.6 49 23-72 67-141 (163)
34 3gm8_A Glycoside hydrolase fam 33.8 60 0.002 29.4 5.5 95 34-144 176-281 (801)
35 4ah6_A Aspartate--tRNA ligase, 33.2 30 0.001 30.6 3.3 25 54-78 480-504 (617)
36 2w3j_A Carbohydrate binding mo 32.9 1.2E+02 0.0042 21.0 6.3 29 39-72 51-79 (145)
37 3nqn_A Uncharacterized protein 32.5 44 0.0015 24.4 3.6 23 117-139 47-69 (158)
38 1zki_A Hypothetical protein PA 32.0 1.1E+02 0.0037 20.1 6.8 70 2-76 55-126 (133)
39 2vzs_A CSXA, EXO-beta-D-glucos 30.9 2.4E+02 0.0082 26.1 9.2 113 20-144 223-351 (1032)
40 3mx7_A FAS apoptotic inhibitor 29.7 42 0.0014 22.3 2.9 27 41-72 61-87 (90)
41 3q48_A Chaperone CUPB2; IG fol 28.2 79 0.0027 24.5 4.7 44 45-94 175-218 (257)
42 2g30_A AP-2 complex subunit be 28.1 69 0.0024 24.9 4.4 57 39-97 55-112 (258)
43 2e6j_A Hydin protein; PAPD, st 27.6 1.2E+02 0.0041 19.4 5.0 69 21-95 7-79 (112)
44 2kut_A Uncharacterized protein 27.6 53 0.0018 22.8 3.2 57 36-97 13-74 (122)
45 1row_A SSP-19, MSP-domain prot 27.5 1.4E+02 0.0047 20.0 5.4 47 42-94 18-64 (109)
46 1edq_A Chitinase A; beta-alpha 27.2 1.2E+02 0.0039 26.1 6.0 35 58-92 50-89 (540)
47 2hz5_A Dynein light chain 2A, 26.2 95 0.0032 20.9 4.3 47 1-51 56-105 (106)
48 4i83_A 3-hydroxyacyl-[acyl-car 25.3 1.7E+02 0.0058 20.2 5.9 50 24-76 96-145 (152)
49 2oyz_A UPF0345 protein VPA0057 25.1 57 0.002 21.8 2.9 43 56-98 46-89 (94)
50 1iu1_A Gamma1-adaptin; coated 24.6 1.9E+02 0.0063 20.4 9.7 86 41-145 55-141 (146)
51 2qsv_A Uncharacterized protein 24.3 73 0.0025 23.7 3.8 67 20-94 116-183 (220)
52 3oba_A Beta-galactosidase; TIM 24.2 34 0.0012 32.0 2.2 43 44-93 661-703 (1032)
53 3g5w_A Multicopper oxidase typ 24.0 1.2E+02 0.0041 23.9 5.2 53 42-94 187-242 (318)
54 2e9g_A AP-1 complex subunit ga 23.8 1.8E+02 0.0062 20.0 8.5 88 40-146 39-127 (131)
55 1vjj_A Protein-glutamine gluta 23.4 1.5E+02 0.0051 26.6 6.1 80 22-104 480-562 (692)
56 3arx_A Chitinase A; TIM barrel 23.4 1.2E+02 0.0041 26.3 5.4 51 37-93 38-93 (584)
57 3eo6_A Protein of unknown func 23.2 1.2E+02 0.0042 20.6 4.4 42 57-98 60-102 (106)
58 2gll_A FABZ, (3R)-hydroxymyris 22.8 2.1E+02 0.0071 20.3 7.2 49 25-76 115-163 (171)
59 3qis_A Inositol polyphosphate 22.7 1.4E+02 0.0049 24.1 5.5 82 14-100 20-107 (366)
60 3f5r_A FACT complex subunit PO 22.7 8.7 0.0003 29.2 -1.8 55 5-61 107-162 (191)
61 1u1z_A (3R)-hydroxymyristoyl-[ 21.2 2.2E+02 0.0075 20.0 6.8 49 25-76 111-159 (168)
62 4h4g_A (3R)-hydroxymyristoyl-[ 20.7 2.3E+02 0.0078 20.0 6.9 50 24-76 100-149 (160)
63 1wj5_A Hypothetical protein (r 20.4 39 0.0013 23.6 1.4 21 3-23 20-41 (120)
No 1
>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}
Probab=100.00 E-value=3.3e-52 Score=319.92 Aligned_cols=151 Identities=59% Similarity=1.061 Sum_probs=149.2
Q ss_pred CchhhHHhhhhHhhhhcCccCCeEEEEEEEEceecccceEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEECCCCe
Q 045101 1 MAQLVDKAKNYVTDKVTNMRKPEASLSKFRLKGVSREGVDYLADVSIDNPYSHSIPICEISYVLKSDGRVIATGTIPDPG 80 (153)
Q Consensus 1 ~~~~~~~~~~f~~~k~~~~~~P~V~l~~v~~~~~~l~~~~~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~~~~~ 80 (153)
|+|||||||+|++||++++++|+|++++++|.++++++++|.++++|+|||++|||+++++|+|++||+++++|++++++
T Consensus 24 ~~~~~~~~k~f~~~ki~~~~~PeV~v~~v~~~~~~l~~~~~~l~LrV~NPN~~pLpi~gi~Y~L~vnG~~lasG~s~~~~ 103 (174)
T 1yyc_A 24 ISSLLDKAKGFFAEKLANIPTPEATVDDVDFKGVTRDGVDYHAKVSVKNPYSQSIPICQISYILKSATRTIASGTIPDPG 103 (174)
T ss_dssp HHHHHHHHHHHHHHTTTTSCCCEEEEEEEEEEEECSSSEEEEEEEEEEECSSSCCBCCSEEEEEEESSSCEEEEEESCCC
T ss_pred hhHHHHHhhhhHHHhhcCCCCCEEEEEEeEEeccccceEEEEEEEEEECCCCCCccccceEEEEEECCEEEEEEecCCCc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeCCCeEEEEEeEEEechhHHHHHHhhcCCCccceEEEEEEEEccCcccceeeeeeeEeEEeCCCCcccc
Q 045101 81 SIKGNDKTVLNVPVKVPHSVLVSLVKDIARDWDIDYLLEVGLIIDLPLIGNFTIPLSTQGEVKLPTLTDFF 151 (153)
Q Consensus 81 ~Ipa~g~~~v~vpv~v~~~~l~~~~~~l~~~~~i~Y~l~g~l~~~~p~~G~~~ip~~~~G~i~lp~l~~~~ 151 (153)
+|||+|++.++||++++|.+++++++++.++|.++|+|+|++.+++|++|.+++||+++|+++||++||+|
T Consensus 104 tIpa~g~~~v~Vpv~v~~~~l~~~~~~l~~~~~i~Y~L~g~L~id~pv~G~~tip~s~~Gei~LP~l~d~~ 174 (174)
T 1yyc_A 104 SLVGSGTTVLDVPVKVAYSIAVSLMKDMCTDWDIDYQLDIGLTFDIPVVGDITIPVSTQGEIKLPSLRDFF 174 (174)
T ss_dssp BCCSSEEEEEEEEEEESHHHHHHTCCCCCSSEEECEEEEEEEEEECTTSSEEEEEEEEECCEEECTTSSCC
T ss_pred eECCCCcEEEEEEEEEEHHHHHHHHHhcCCCCccceEEEEEEEeccCCcCCEEEeEeeceEEECCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998
No 2
>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1
Probab=100.00 E-value=5.6e-53 Score=317.82 Aligned_cols=151 Identities=59% Similarity=1.066 Sum_probs=149.4
Q ss_pred CchhhHHhhhhHhhhhcCccCCeEEEEEEEEceecccceEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEECCCCe
Q 045101 1 MAQLVDKAKNYVTDKVTNMRKPEASLSKFRLKGVSREGVDYLADVSIDNPYSHSIPICEISYVLKSDGRVIATGTIPDPG 80 (153)
Q Consensus 1 ~~~~~~~~~~f~~~k~~~~~~P~V~l~~v~~~~~~l~~~~~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~~~~~ 80 (153)
|+|||||||+|++||++++++|+|+++++++.++++++++|.++++|+|||+++||+++++|+|++||+++++|.+++++
T Consensus 1 ~~~~~~~~~~f~~~k~~~~~~P~v~v~~v~~~~~~~~~~~~~~~l~V~NPN~~~lpi~gi~y~l~vng~~lasG~~~~~~ 80 (151)
T 1xo8_A 1 MASLLDKAKDFVADKLTAIPKPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPG 80 (151)
T ss_dssp CTTSCSCCCTTCSSSCCCCCSCCCBCSEEEECCCTTTEECEEEEEEEECSSSSCCCCEEEEEEEESSSSCEEEEEEEECC
T ss_pred ChhHHHHHHHHHHHhhcCCCCCEEEEEEeEEeccCcceeEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEecCCCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeCCCeEEEEEeEEEechhHHHHHHhhcCCCccceEEEEEEEEccCcccceeeeeeeEeEEeCCCCcccc
Q 045101 81 SIKGNDKTVLNVPVKVPHSVLVSLVKDIARDWDIDYLLEVGLIIDLPLIGNFTIPLSTQGEVKLPTLTDFF 151 (153)
Q Consensus 81 ~Ipa~g~~~v~vpv~v~~~~l~~~~~~l~~~~~i~Y~l~g~l~~~~p~~G~~~ip~~~~G~i~lp~l~~~~ 151 (153)
+|||+|+++++||++++|.++.++++++.+++.++|+|+|++++++|++|.+++||+++|+++||++||+|
T Consensus 81 ~ipa~g~~~v~vpv~v~~~~l~~~~~~l~~~~~i~Y~l~g~l~i~lp~~G~~tip~~~~Gei~lp~~~d~~ 151 (151)
T 1xo8_A 81 SLKAKDMTALDIPVVVPYSILFNLARDVGVDWDIDYELQIGLTIDLPVVGEFTIPISSKGEIKLPTFKDFF 151 (151)
T ss_dssp CCSSSSEEEEEECCCEEHHHHHHHHHHHHHHSEEEEEEEEEEEECCTTTSSEEEEEEEEEEEECCSCSSCC
T ss_pred EECCCCcEEEEEEEEEEHHHHHHHHHhcccCCcccEEEEEEEEEcccccCcEEEeEeeccEEECCCCCCCC
Confidence 99999999999999999999999999999899999999999999999999999999999999999999998
No 3
>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}
Probab=99.89 E-value=4.3e-22 Score=147.11 Aligned_cols=113 Identities=16% Similarity=0.168 Sum_probs=99.8
Q ss_pred EEEEEEEEceecccceEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEECCCCeeEeCCCeEEEEEeEEEechhHHH
Q 045101 24 ASLSKFRLKGVSREGVDYLADVSIDNPYSHSIPICEISYVLKSDGRVIATGTIPDPGSIKGNDKTVLNVPVKVPHSVLVS 103 (153)
Q Consensus 24 V~l~~v~~~~~~l~~~~~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~~~~~~Ipa~g~~~v~vpv~v~~~~l~~ 103 (153)
|.-.+.+|+.++.+.+.|.++|+|+|||++||+++|++|+|++||.++++|.++++++|||+|++.+++++++++..+.+
T Consensus 3 v~~i~~~WG~v~~~~t~~~~~l~V~NPN~~~l~i~gl~y~v~lng~~la~G~s~~~~~I~~~g~~~v~v~~~i~~~~l~~ 82 (136)
T 3but_A 3 LESVKAMWGVVTDSQTEIVALAKVRNEDVVPIVVSGYHYTIEMNGVKVADGYENSPVTVKPASATTLKFSLRLNNSFLRE 82 (136)
T ss_dssp EEEEEEEECCCCSSEEEEEEEEEEECCSSSCEEEEEEEEEEEETTEEEEEEEECCCEEECTTCEEEEEEEEEEEHHHHTT
T ss_pred ccceeeeeccEeCcEEEEEEEEEEeCCCCcceeeeceEEEEEECCEEEEeeeecCceEECCCCcEEEEEEEEEchHHhHH
Confidence 55667899999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHhh-cCCCccceEEEEEEEEccCcccceeeeee
Q 045101 104 LVKDI-ARDWDIDYLLEVGLIIDLPLIGNFTIPLS 137 (153)
Q Consensus 104 ~~~~l-~~~~~i~Y~l~g~l~~~~p~~G~~~ip~~ 137 (153)
.|... .+++.-.|+++.++.++++ -+.+.+|+.
T Consensus 83 ~~~~hi~nge~s~l~i~~~~~l~v~-g~~~~vp~~ 116 (136)
T 3but_A 83 WWVTHIANGEKTKIRVAIKPTIEIG-GRDVEVPVF 116 (136)
T ss_dssp HHHHHHHTTSEEEEEEEEEEEEECC--CCEECCCE
T ss_pred HHHHHhhcCCceEEEEEEEEEEEeC-CEEEEEccc
Confidence 66655 5666777888888888877 456677755
No 4
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=93.02 E-value=1.7 Score=30.79 Aligned_cols=84 Identities=11% Similarity=0.044 Sum_probs=61.4
Q ss_pred ccCCeEEEEEEEEceecccceEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEECCCCeeEeCCCeEEEEEeEEEec
Q 045101 19 MRKPEASLSKFRLKGVSREGVDYLADVSIDNPYSHSIPICEISYVLKSDGRVIATGTIPDPGSIKGNDKTVLNVPVKVPH 98 (153)
Q Consensus 19 ~~~P~V~l~~v~~~~~~l~~~~~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~~~~~~Ipa~g~~~v~vpv~v~~ 98 (153)
+..|.+.+ ++..-.---.+....+.+.|+|=...+. .++.-.|++||..+.+- ...++++.++++++.++
T Consensus 14 ~~~pDL~V-~is~P~~v~~G~~~ti~vtV~N~G~~~a--~~~~V~lyvng~~v~t~----~v~La~G~s~tv~f~~~--- 83 (127)
T 3idu_A 14 FEFPDLTV-EIKGPDVVGVNKLAEYEVHVKNLGGIGV--PSTKVRVYINGTLYKNW----TVSLGPKEEKVLTFNWT--- 83 (127)
T ss_dssp CSSCCEEE-EEESCSEECTTCCEEEEEEEEECSSSCE--EEEEEEEEETTEEEEEE----EEEECTTCEEEEEEEEC---
T ss_pred ccCCCeEE-EecCCCcccCCCEEEEEEEEEECCCCcc--CCcEEEEEECCEEEeeE----EeccCCCCeEEEEEEEE---
Confidence 48898888 6653222245778899999999988874 57888899999988764 34799999999888863
Q ss_pred hhHHHHHHhhcCCCccceEEEEEEE
Q 045101 99 SVLVSLVKDIARDWDIDYLLEVGLI 123 (153)
Q Consensus 99 ~~l~~~~~~l~~~~~i~Y~l~g~l~ 123 (153)
....=.|+|++.++
T Consensus 84 -----------~~~~G~~~v~AvVD 97 (127)
T 3idu_A 84 -----------PTQEGMYRINATVD 97 (127)
T ss_dssp -----------CSSCEEEEEEEEES
T ss_pred -----------cCCCcEEEEEEEEc
Confidence 12233577777764
No 5
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=91.05 E-value=0.21 Score=34.22 Aligned_cols=72 Identities=21% Similarity=0.303 Sum_probs=48.6
Q ss_pred ccCCeEEEEEEEEceecccceEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEECCCCeeEeCCCeEEEEEeEEEe
Q 045101 19 MRKPEASLSKFRLKGVSREGVDYLADVSIDNPYSHSIPICEISYVLKSDGRVIATGTIPDPGSIKGNDKTVLNVPVKVP 97 (153)
Q Consensus 19 ~~~P~V~l~~v~~~~~~l~~~~~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~~~~~~Ipa~g~~~v~vpv~v~ 97 (153)
+..|++++ ++.+-.-.+..+.+.++.+||-+. ++.+..+.++--|.. ++..-+-..|+++++..+++.++=.
T Consensus 3 ~~~P~i~I---~v~g~~~v~~~l~v~vsf~NPL~~--~L~~c~~~vEG~GL~--~~~~~~~~~v~pg~~~~~~~~~~P~ 74 (102)
T 2xzz_A 3 YFQSMLSL---TLLGAAVVGQECEVQIVFKNPLPV--TLTNVVFRLEGSGLQ--RPKILNVGDIGGNETVTLRQSFVPV 74 (102)
T ss_dssp ---CEEEE---EESSCCCSSSCEEEEEEEECCSSS--CBCSEEEEEEETTTE--EEEEEEECCBCTTCEEEEEEEECCC
T ss_pred ccCCcEEE---EECCCcccCCeEEEEEEEECCCCC--cccCEEEEEECCCCC--cceEEEcCcCCCCCEEEEEEEEecC
Confidence 46777754 565566678899999999998665 456777777666553 3333344679999998888877433
No 6
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis}
Probab=88.47 E-value=2.6 Score=37.27 Aligned_cols=116 Identities=17% Similarity=0.182 Sum_probs=70.9
Q ss_pred cCCeEEEEE-------EEEc--eecccceEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEECCCCeeEeCCCeEEE
Q 045101 20 RKPEASLSK-------FRLK--GVSREGVDYLADVSIDNPYSHSIPICEISYVLKSDGRVIATGTIPDPGSIKGNDKTVL 90 (153)
Q Consensus 20 ~~P~V~l~~-------v~~~--~~~l~~~~~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~~~~~~Ipa~g~~~v 90 (153)
..|.+.|.+ +.+. .++...+++.+.+.|.|+..-+- ..++.++.-+|+.+++... ..++++.+...+
T Consensus 147 ~~~~~~I~~~~~~~~gv~v~~~~~~~~~a~v~v~~~~~~~~~~~~--~~v~~~l~d~g~~v~~~~~--~~~~~~~~~~~~ 222 (667)
T 3cmg_A 147 ITDETCISPLDYASPGVYLVQEVVSPQEAKVCAKVNLSNRAADGT--AELQVLVTDGTKVICKESR--NVSLKQGADILE 222 (667)
T ss_dssp EECSEEECSCSTTSCSEEEEEEEECSSEEEEEEEEEEEECSSSEE--EEEEEEEEETTEEEEEEEE--EEEECTTCEEEE
T ss_pred EECCEEEeecccCCCceEEecccccCceEEEEEEEEEEcCCCCce--EEEEEEEECCCEEEEEEEE--EEEECCCCceEE
Confidence 356666664 4443 34555678889999998754321 3355555558888887653 356778777667
Q ss_pred EEeEEEechhHHHHHHhhcCCCccceEEEEEEEE--------ccCcccceeeeeeeEeEEeCC
Q 045101 91 NVPVKVPHSVLVSLVKDIARDWDIDYLLEVGLII--------DLPLIGNFTIPLSTQGEVKLP 145 (153)
Q Consensus 91 ~vpv~v~~~~l~~~~~~l~~~~~i~Y~l~g~l~~--------~~p~~G~~~ip~~~~G~i~lp 145 (153)
.+.+.++-..+. . +.+.+-=|+++..+.. ... +|-.++.++..+.+-|=
T Consensus 223 ~~~~~v~~p~LW----s-g~~~P~LY~l~~~l~~~g~~~D~~~~~-~G~R~i~~~~~~~f~lN 279 (667)
T 3cmg_A 223 QLPLLIQKPRLW----N-GCEDPFMYQVSISLHKDGKQIDSVTQP-LGLRYYHTDPDKGFFLN 279 (667)
T ss_dssp EEEEEEESCCCB----C-GGGCBCCEEEEEEEEETTEEEEEEEEE-ECCCCEEEETTTEEEET
T ss_pred EEEEEcCCCeeC----C-CCcCceeEEEEEEEEECCEEEEEEEEe-eeeEEEEEeCCCcEEEC
Confidence 766666643222 1 1345555888888732 244 78778877754445543
No 7
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=85.38 E-value=7.2 Score=26.97 Aligned_cols=85 Identities=16% Similarity=0.146 Sum_probs=60.6
Q ss_pred CCeEEEEEEEEceecccceEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEECCCCeeEeCCCeEEEEEeEEEechh
Q 045101 21 KPEASLSKFRLKGVSREGVDYLADVSIDNPYSHSIPICEISYVLKSDGRVIATGTIPDPGSIKGNDKTVLNVPVKVPHSV 100 (153)
Q Consensus 21 ~P~V~l~~v~~~~~~l~~~~~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~~~~~~Ipa~g~~~v~vpv~v~~~~ 100 (153)
.|++.++++.... --.+....+...|+|.-.-+ -....-.|++||..+...... .+.++.++.+.+.++.
T Consensus 2 ~PDL~vt~itP~~-~~~~~~~ti~atVkN~G~~~--a~~~~V~ly~~g~~v~t~~v~---~LaaG~s~tv~~~w~~---- 71 (114)
T 2l0d_A 2 IPDLVPVSLTPVT-VVPNTVNTMTATIENQGNKD--STSFNVSLLVDGIVVDTQTVT---SLESENSTNVDFHWTL---- 71 (114)
T ss_dssp CCCEEEEEEECSE-ECTTSEEEEEEEEEECSSSC--BCCEEEEEEETTEEEEEEEES---CBCBTCEEEEEEEEEC----
T ss_pred CCCcEEEeccCCC-cCCCCeEEEEEEEEECCCCC--CCCEEEEEEECCEEEcceecc---cccCCCEEEEEEEEee----
Confidence 4788888886544 34667788889999998766 467888899999988877532 4788888888775421
Q ss_pred HHHHHHhhcCCCccceEEEEEEEE
Q 045101 101 LVSLVKDIARDWDIDYLLEVGLII 124 (153)
Q Consensus 101 l~~~~~~l~~~~~i~Y~l~g~l~~ 124 (153)
....=.|+|++.++-
T Consensus 72 ---------~~~~G~ytl~a~VD~ 86 (114)
T 2l0d_A 72 ---------DGTANSYTLTVNVDP 86 (114)
T ss_dssp ---------CCSCSEEEEEEEECT
T ss_pred ---------cCcCceEEEEEEECC
Confidence 112345888887764
No 8
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3
Probab=84.16 E-value=1.5 Score=41.11 Aligned_cols=49 Identities=18% Similarity=0.463 Sum_probs=42.1
Q ss_pred EEEEECCCCCC-cccccEEEEEEECCEEEEEEECC----CCeeEeCCCeEEEEEe
Q 045101 44 DVSIDNPYSHS-IPICEISYVLKSDGRVIATGTIP----DPGSIKGNDKTVLNVP 93 (153)
Q Consensus 44 ~l~V~NPN~~~-L~i~~l~y~l~lng~~ia~G~~~----~~~~Ipa~g~~~v~vp 93 (153)
.++|.|-|.|. |.=..+.|+|..||+.+.+|... . ..|+++++..+++|
T Consensus 625 ~~~v~N~~~f~~l~~~~~~w~~~~~g~~~~~g~~~~~~~~-~~~~p~~~~~~~l~ 678 (1024)
T 1yq2_A 625 TLAVANLRHTADASDVVLRWRVEHDGAVAASGEVAAEGSD-GPLRAGESATIALP 678 (1024)
T ss_dssp EEEEEECCSSCCSTTEEEEEEEEETTEEEEEEEEECBCSS-SBCCTTCEEEEECC
T ss_pred eEEEEEccCCCCCccCeEEEEEEECCEEEEeeEEeccccC-ccCCCCCceEEEec
Confidence 48999999886 55557889999999999999983 3 58999999999998
No 9
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=80.46 E-value=8 Score=34.51 Aligned_cols=116 Identities=14% Similarity=0.183 Sum_probs=69.2
Q ss_pred cCCeEEEEE-------EEEc--eecccceEEEEEEEEECCCCCCcccccEEEEEE-ECCEEEEEEECCCCeeEeCCCeEE
Q 045101 20 RKPEASLSK-------FRLK--GVSREGVDYLADVSIDNPYSHSIPICEISYVLK-SDGRVIATGTIPDPGSIKGNDKTV 89 (153)
Q Consensus 20 ~~P~V~l~~-------v~~~--~~~l~~~~~~~~l~V~NPN~~~L~i~~l~y~l~-lng~~ia~G~~~~~~~Ipa~g~~~ 89 (153)
..|++.|.+ +.+. .++...+++.+.+.|.|+..-+-.+ .++++|. -+|+.+++.. ...++.+.++..
T Consensus 159 ~~~~~~I~~~~~~~~gv~v~~~~~~~~~a~v~v~~~v~n~~~~~~~~-~v~~~l~d~~g~~v~~~~--~~~~~~~~~~~~ 235 (692)
T 3fn9_A 159 VTEQNNITVTDCASPGVYITQKDVSKKSADITVKVKLDNAGLQPAAV-TLENTIYTQEGQKVGTHS--RSFDLSPQGTQT 235 (692)
T ss_dssp EECSEEECSCSTTCCSEEEEEESCSSSEEEEEEEEEEEECSSSCEEE-EEEEEEECTTSCEEEEEE--EEEEECSSSCEE
T ss_pred EECCeEEecccccCCcEEEEeccccCCEEEEEEEEEEEeCCCCceeE-EEEEEEECCCCCEEEEEE--eEEEecCCCeEE
Confidence 356777765 3443 4555667889999999986443221 2333333 2466777663 235677777777
Q ss_pred EEEeEEEechhHHHHHHhhcCCCccceEEEEEEE--------EccCcccceeeeeeeEeEEeC
Q 045101 90 LNVPVKVPHSVLVSLVKDIARDWDIDYLLEVGLI--------IDLPLIGNFTIPLSTQGEVKL 144 (153)
Q Consensus 90 v~vpv~v~~~~l~~~~~~l~~~~~i~Y~l~g~l~--------~~~p~~G~~~ip~~~~G~i~l 144 (153)
+.+.+.+.-..+.+ +.+.+-=|+|...+. ...+ +|-.+|-++..+.+-|
T Consensus 236 ~~~~~~v~~p~LWs-----g~e~P~LY~l~v~l~~~g~~~D~~~~~-~GfR~ie~~~~~~f~l 292 (692)
T 3fn9_A 236 YLSTFKLKNPHLWQ-----GRKDPYLYKVVCRLMADGKVIDEVVQP-LGVRKYEIVAGKGFFL 292 (692)
T ss_dssp EEEEEEEESCCCCC-----TTSCCCCEEEEEEEESSSSEEEEEEEE-ECCCCEEEETTTEEEE
T ss_pred EEEEEEcCCceeCC-----CCcCcccEEEEEEEEECCEEEEEEEEE-ecceEEEEECCCceEE
Confidence 77777776432221 245555599988873 2245 7777787765433444
No 10
>3mnm_A ADP-ribosylation factor-binding protein GGA2; IG-like, beta sandwich, protein transport; HET: MLY; 1.73A {Saccharomyces cerevisiae}
Probab=80.10 E-value=13 Score=25.93 Aligned_cols=92 Identities=12% Similarity=0.094 Sum_probs=57.7
Q ss_pred EEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEECCCCeeEeCCCeEEEEEeEEEechhHHHHHHhhcCCCccceEEE
Q 045101 40 DYLADVSIDNPYSHSIPICEISYVLKSDGRVIATGTIPDPGSIKGNDKTVLNVPVKVPHSVLVSLVKDIARDWDIDYLLE 119 (153)
Q Consensus 40 ~~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~~~~~~Ipa~g~~~v~vpv~v~~~~l~~~~~~l~~~~~i~Y~l~ 119 (153)
.+.+.+...|-.+. +|.++.+.+-+---.=.+-......+||+++...++=.+++.-.. -..+..+.-|++
T Consensus 32 ~~~i~~~fsN~s~~--~it~f~fqaAVPKs~kL~L~p~Sg~~L~p~~~~~itQ~~~I~n~~-------~~~~~~lklR~k 102 (123)
T 3mnm_A 32 VIRIXSFFTNLSSS--PISNLVFLLAVPKSMSLXLQPQSSNFMIGNAKDGISQEGTIENAP-------ANPSKALXVKWK 102 (123)
T ss_dssp CEEEEEEEEECSSS--CEEEEEEEEECCTTSEEEECCCSCSCBCTTCTTCEEEEEEEESCC-------CC---CCEEEEE
T ss_pred eEEEEEEEecCCCC--ccccEEEEEecCcccEEEeECCCcCccCCCCCCCEEEEEEEecCC-------CCCCCCEEEEEE
Confidence 46677888886654 699999998887665555555666789998544444444443210 011345555555
Q ss_pred EEEEEccCcccceeeeeeeEeEEeCCCC
Q 045101 120 VGLIIDLPLIGNFTIPLSTQGEVKLPTL 147 (153)
Q Consensus 120 g~l~~~~p~~G~~~ip~~~~G~i~lp~l 147 (153)
....+ |. -|+++.|++.||..
T Consensus 103 lsY~~-----~g--~~~~E~g~~~lp~~ 123 (123)
T 3mnm_A 103 VNYSV-----NS--TQAEETAVFTLPNV 123 (123)
T ss_dssp EEEEE-----TT--EEEEEEEEEECCCC
T ss_pred EEEEE-----CC--eEEEEEEEEecCCC
Confidence 55553 32 47999999999973
No 11
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=75.07 E-value=1.7 Score=39.45 Aligned_cols=82 Identities=18% Similarity=0.207 Sum_probs=56.7
Q ss_pred hHhhhhcCccCCeEEEEEEEEceecccceEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEECCCCeeEeCCCeEEE
Q 045101 11 YVTDKVTNMRKPEASLSKFRLKGVSREGVDYLADVSIDNPYSHSIPICEISYVLKSDGRVIATGTIPDPGSIKGNDKTVL 90 (153)
Q Consensus 11 f~~~k~~~~~~P~V~l~~v~~~~~~l~~~~~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~~~~~~Ipa~g~~~v 90 (153)
+++|+--.+++|.++++ +.+-...+..+.+.+.++||-+.+| .+..+.++=-| +..+..-+-..|+++++..+
T Consensus 619 ~~~~~di~l~~P~l~I~---v~g~~~v~~~l~v~vsf~NPL~~~L--~~c~~~vEG~G--L~~~~~~~~~~v~pg~~~~~ 691 (731)
T 1ex0_A 619 LAKQKSTVLTIPEIIIK---VRGTQVVGSDMTVTVQFTNPLKETL--RNVWVHLDGPG--VTRPMKKMFREIRPNSTVQW 691 (731)
T ss_dssp EEEEEEEECBCCCCEEE---EEECCBTTSCEEEEEEEECCSSSCE--EEEEEEEEETT--TEEEEEEEEEEECTTCEEEE
T ss_pred EEEEEEEEEeCCCEEEE---eCCCcccCCeEEEEEEEECCCCCcc--cceEEEEECCC--CCceeeEecCccCCCCEEEE
Confidence 56677777789987654 4455566889999999999876655 45555554444 44445555678999999888
Q ss_pred EEeEEEech
Q 045101 91 NVPVKVPHS 99 (153)
Q Consensus 91 ~vpv~v~~~ 99 (153)
++.++-...
T Consensus 692 ~~~~~P~~~ 700 (731)
T 1ex0_A 692 EEVCRPWVS 700 (731)
T ss_dssp EEEECCSSC
T ss_pred EEEEEeccc
Confidence 888744433
No 12
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=70.39 E-value=1.3 Score=39.94 Aligned_cols=82 Identities=17% Similarity=0.188 Sum_probs=56.7
Q ss_pred hHhhhhcCccCCeEEEEEEEEceecccceEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEECCCC-eeEeCCCeEE
Q 045101 11 YVTDKVTNMRKPEASLSKFRLKGVSREGVDYLADVSIDNPYSHSIPICEISYVLKSDGRVIATGTIPDP-GSIKGNDKTV 89 (153)
Q Consensus 11 f~~~k~~~~~~P~V~l~~v~~~~~~l~~~~~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~~~~-~~Ipa~g~~~ 89 (153)
+++|+--.+++|++++ ++.+-...+..+.+.+..+||-+.+ +.+..+.++=-|.. .+..-+- ..|+++++..
T Consensus 574 ~~~~~di~l~~P~l~I---~v~g~~~v~~~l~a~vsf~NPL~~~--L~~c~~~vEG~GL~--~~~~~~~~~~v~Pg~~~~ 646 (695)
T 1g0d_A 574 IMTVANIPLSTPELLV---QVPGKAVVWEPLTAYVSFTNPLPVP--LKGGVFTLEGAGLL--SATQIHVNGAVAPSGKVS 646 (695)
T ss_dssp EEEEEEEECBCCCCEE---ECCSCEETTCCEEEEEEEECCSSSC--EESCEEEEEETTTE--EEEEEECSSEECTTCEEE
T ss_pred EEEEEEEEEcCCCEEE---EeCCCcccCCeEEEEEEEECCCCCc--ccceEEEEECCCCC--cceEEecCCCcCCCCEEE
Confidence 5667777778898754 4555556688999999999987655 45666666655543 3333334 6899999988
Q ss_pred EEEeEEEech
Q 045101 90 LNVPVKVPHS 99 (153)
Q Consensus 90 v~vpv~v~~~ 99 (153)
+++.++=...
T Consensus 647 ~~~~~~P~~~ 656 (695)
T 1g0d_A 647 VKLSFSPMRT 656 (695)
T ss_dssp EEEEECCSSC
T ss_pred EEEEEEcCCc
Confidence 8888744433
No 13
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ...
Probab=70.12 E-value=6.1 Score=37.01 Aligned_cols=48 Identities=17% Similarity=0.429 Sum_probs=41.0
Q ss_pred EEEEECCCC-CCcccccEEEEEEECCEEEEEEECCCCeeEeCCCeEEEEEe
Q 045101 44 DVSIDNPYS-HSIPICEISYVLKSDGRVIATGTIPDPGSIKGNDKTVLNVP 93 (153)
Q Consensus 44 ~l~V~NPN~-~~L~i~~l~y~l~lng~~ia~G~~~~~~~Ipa~g~~~v~vp 93 (153)
.+.|.|-+. ..+.=-.+.|+|..||+.+.+|... ..|++++++.++||
T Consensus 635 ~~~v~N~~~f~~l~~~~~~~~~~~~g~~~~~g~~~--~~v~p~~~~~~~l~ 683 (1023)
T 1jz7_A 635 TIEVTSEYLFRHSDNELLHWMVALDGKPLASGEVP--LDVAPQGKQLIELP 683 (1023)
T ss_dssp EEEEEECCSSCCCTTCEEEEEEEETTEEEEEEEEE--CCCCTTCEEEEECC
T ss_pred eEEEEeeeEeccCcccEEEEEEEECceEEEeeeEe--eeECCCceEEEEec
Confidence 489999997 4556568899999999999999986 58999999998887
No 14
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=67.69 E-value=6 Score=30.35 Aligned_cols=41 Identities=22% Similarity=0.329 Sum_probs=32.1
Q ss_pred EEEEECCCCCCcccccEEEEEEECCEEEEEEECCCCeeEeCCCeEEEEEeE
Q 045101 44 DVSIDNPYSHSIPICEISYVLKSDGRVIATGTIPDPGSIKGNDKTVLNVPV 94 (153)
Q Consensus 44 ~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~~~~~~Ipa~g~~~v~vpv 94 (153)
.|.|.||-|+=+.+.. +.++|+.+. ...|+++++..+.+|-
T Consensus 149 ~l~v~NptPyyvtl~~----l~~~g~~i~------~~mv~P~s~~~~~l~~ 189 (218)
T 4ay0_A 149 KLIAENPSPFYMNIGE----LTFGGKSIP------SHYIPPKSTWAFDLPK 189 (218)
T ss_dssp EEEEEECSSSCEEEEE----EEETTEECC------CCEECTTEEEEEEC--
T ss_pred EEEEECCCCCEEEEEE----EEECCEEcc------CcEECCCCeeEEECCc
Confidence 3889999999999965 567998763 4689999999888774
No 15
>3o0l_A Uncharacterized protein; PFAM DUF1425 family member, structural genomics, joint cente structural genomics, JCSG, protein structure initiative; HET: MSE; 1.81A {Shewanella loihica}
Probab=66.57 E-value=25 Score=24.02 Aligned_cols=78 Identities=12% Similarity=0.100 Sum_probs=53.6
Q ss_pred EEEEEEEEceecccceEEEEEEEEECCCCCCcccccEEEEEE---ECCEEEEEEECC-CCeeEeCCCeEEEEEeEEEech
Q 045101 24 ASLSKFRLKGVSREGVDYLADVSIDNPYSHSIPICEISYVLK---SDGRVIATGTIP-DPGSIKGNDKTVLNVPVKVPHS 99 (153)
Q Consensus 24 V~l~~v~~~~~~l~~~~~~~~l~V~NPN~~~L~i~~l~y~l~---lng~~ia~G~~~-~~~~Ipa~g~~~v~vpv~v~~~ 99 (153)
+.+.+++. ...+-.+.+...++|-...++. +.|.++ -+|..+.....+ +...|+++++.++.--.
T Consensus 26 i~v~~~~~---~~~~g~l~~~~~l~N~~~~~~~---l~Yrf~WyD~~Gl~v~~~~~~W~~l~l~~~~~~~l~~va----- 94 (112)
T 3o0l_A 26 VDVSAVTT---QAEAGFLRARGTIISKSPKDQR---LQYKFTWYDINGATVEDEGVSWKSLKLHGKQQMQVTALS----- 94 (112)
T ss_dssp EEEEEEEE---ECGGGCEEEEEEEEECSSSCEE---EEEEEEEECTTSCBCCCTTCCCEEEEECTTCEEEEEEEC-----
T ss_pred EEEeCCEE---EecCCeEEEEEEEEeCCCCCEE---EEEEEEEECCCCCCcCCCCCCcEEEEECCCCeEEEEEEC-----
Confidence 45555554 3344457888888999998886 788887 678777754345 66888888887776543
Q ss_pred hHHHHHHhhcCCCccceEEEEE
Q 045101 100 VLVSLVKDIARDWDIDYLLEVG 121 (153)
Q Consensus 100 ~l~~~~~~l~~~~~i~Y~l~g~ 121 (153)
+..+..+|||..+
T Consensus 95 ---------pn~~A~~fRlylr 107 (112)
T 3o0l_A 95 ---------PNATAVRCELYVR 107 (112)
T ss_dssp ---------SSTTCCEEEEEEE
T ss_pred ---------CCCCeEEEEEEEh
Confidence 3456677777554
No 16
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A
Probab=65.00 E-value=8.9 Score=35.87 Aligned_cols=49 Identities=24% Similarity=0.315 Sum_probs=40.6
Q ss_pred EEEEECCCCCC-cccccEEEEEEE-CCEEEEEEECCCCeeEeCCCeEEEEEeE
Q 045101 44 DVSIDNPYSHS-IPICEISYVLKS-DGRVIATGTIPDPGSIKGNDKTVLNVPV 94 (153)
Q Consensus 44 ~l~V~NPN~~~-L~i~~l~y~l~l-ng~~ia~G~~~~~~~Ipa~g~~~v~vpv 94 (153)
.++|.|-+.|. |.=-.+.|+|.. ||+.+.+|... ..|++++++.+++|+
T Consensus 631 ~~~v~N~~~F~~l~~~~~~w~l~~~~G~~~~~g~~~--~~v~p~~~~~~~l~~ 681 (1010)
T 3bga_A 631 KVCIKNWYDFSNLNEYILRWNVKGEDGTVLAEGTKE--VDCEPHATVDVTLGA 681 (1010)
T ss_dssp EEEEEECCSSCCGGGEEEEEEEEETTCCEEEEEEEC--CCCCTTCEEEEECCC
T ss_pred EEEEEeccccCCCcccEEEEEEEEcCceEEEEeEEE--eeeCCCCcEEEEccC
Confidence 58999999764 444456788888 99999999986 589999999998884
No 17
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=64.96 E-value=32 Score=23.91 Aligned_cols=72 Identities=10% Similarity=0.001 Sum_probs=51.2
Q ss_pred EEEEEEEEECCCCCCcccc---cEEEEEEE---CCEEEEE---EE----CCCCeeEeCCCeEEEEEeEEEechhHHHHHH
Q 045101 40 DYLADVSIDNPYSHSIPIC---EISYVLKS---DGRVIAT---GT----IPDPGSIKGNDKTVLNVPVKVPHSVLVSLVK 106 (153)
Q Consensus 40 ~~~~~l~V~NPN~~~L~i~---~l~y~l~l---ng~~ia~---G~----~~~~~~Ipa~g~~~v~vpv~v~~~~l~~~~~ 106 (153)
.+.+.+.|.|+.+.++.+. |..|++.+ +|.++=. |. .-...+|+++.+..++..+.
T Consensus 19 ~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~----------- 87 (120)
T 3isy_A 19 QIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWK----------- 87 (120)
T ss_dssp CEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEES-----------
T ss_pred eEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeC-----------
Confidence 7889999999999999985 88888887 5655431 11 23456889998888887764
Q ss_pred hhcCCCccceEEEEEEEE
Q 045101 107 DIARDWDIDYLLEVGLII 124 (153)
Q Consensus 107 ~l~~~~~i~Y~l~g~l~~ 124 (153)
. .-.+=.|++++.+..
T Consensus 88 ~--~~~pG~Ytl~a~l~~ 103 (120)
T 3isy_A 88 E--VPEPGTYEVKVTFKG 103 (120)
T ss_dssp S--CCCSEEEEEEEEECC
T ss_pred C--CCCCccEEEEEEEEe
Confidence 1 112236999998854
No 18
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=64.84 E-value=6.7 Score=30.51 Aligned_cols=41 Identities=15% Similarity=0.206 Sum_probs=33.4
Q ss_pred EEEEECCCCCCcccccEEEEEEECCEEEEEEECCCCeeEeCCCeEEEEEe
Q 045101 44 DVSIDNPYSHSIPICEISYVLKSDGRVIATGTIPDPGSIKGNDKTVLNVP 93 (153)
Q Consensus 44 ~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~~~~~~Ipa~g~~~v~vp 93 (153)
.|+|.||-|+=+.+..+ .++|+.+. ....|+++++..+.++
T Consensus 171 ~l~v~NptPyyvtl~~l----~~~g~~~~-----~~~mV~P~s~~~~~l~ 211 (239)
T 4djm_A 171 RLKGVNPTPFYINLSTL----TVGGKEVK-----EREYIAPFSSREYPLP 211 (239)
T ss_dssp EEEEECCSSSCBCEEEE----EETTEECS-----SCCCBCTTCEEEEECC
T ss_pred EEEEECCCceEEEEEEE----EECCEecc-----CceeEcCCcceEEEcC
Confidence 38999999999999875 45887754 4568999999998776
No 19
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=63.69 E-value=18 Score=24.56 Aligned_cols=55 Identities=13% Similarity=0.105 Sum_probs=40.9
Q ss_pred ceEEEEEEEEECCCCCCcccccEEEEEEECC---EEEEEEECCCCeeEeCCCeEEEEEeEEEechh
Q 045101 38 GVDYLADVSIDNPYSHSIPICEISYVLKSDG---RVIATGTIPDPGSIKGNDKTVLNVPVKVPHSV 100 (153)
Q Consensus 38 ~~~~~~~l~V~NPN~~~L~i~~l~y~l~lng---~~ia~G~~~~~~~Ipa~g~~~v~vpv~v~~~~ 100 (153)
.++=.-.++|.|--..+ ..|.+.+.| ..+. | ++.+.|+|.....+.|-|+++...
T Consensus 30 ~I~N~Ytlki~Nkt~~~-----~~~~l~v~g~~~l~~~-g--~~~i~v~~g~~~~~~v~v~~~~~~ 87 (118)
T 2r39_A 30 EVENTYTLKVINKTQQV-----QEYNLDVKGLNDVSWY-G--KQTIQVEPGEVLNLPMSLGADPDK 87 (118)
T ss_dssp SEEEEEEEEEEECSSSC-----EEEEEEEESCSSCEEE-S--CCEEEECTTCEEEEEEEEEECGGG
T ss_pred eEEEEEEEEEEECCCCC-----EEEEEEEeCCcccEEe-C--CCcEEECCCCEEEEEEEEEEChHH
Confidence 35667889999988776 567888766 3332 2 345999999999999999888653
No 20
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=59.17 E-value=2.6 Score=37.96 Aligned_cols=79 Identities=11% Similarity=0.213 Sum_probs=53.4
Q ss_pred hHhhhhcCccCCeEEEEEEEEceecccceEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEE-ECCCCeeEeCCCeEE
Q 045101 11 YVTDKVTNMRKPEASLSKFRLKGVSREGVDYLADVSIDNPYSHSIPICEISYVLKSDGRVIATG-TIPDPGSIKGNDKTV 89 (153)
Q Consensus 11 f~~~k~~~~~~P~V~l~~v~~~~~~l~~~~~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G-~~~~~~~Ipa~g~~~ 89 (153)
+++|+--.+++|.+++ ++.+-...+..+.+.+.++||-+.+| .+..+.++=-| +.++ ..-+-..|+++++..
T Consensus 583 ~~~~~di~l~~P~l~I---~v~g~~~v~~~l~v~v~f~NPL~~~L--~~c~~~vEG~G--L~~~~~~~~~~~v~pg~~~~ 655 (692)
T 1vjj_A 583 VVVERDIILDNPTLTL---EVLNEARVRKPVNVQMLFSNPLDEPV--RDCVLMVEGSG--LLLGNLKIDVPTLGPKERSR 655 (692)
T ss_dssp EEEEEEEECBCCCEEE---EECSCCBTTSCEEEEEEEECCSSSCB--CSEEEEEECTT--TSSSCEEEEECCBCTTCEEE
T ss_pred EEEEEEEEEcCCCEEE---EeCCCcccCCeEEEEEEEECCCCCcc--cceEEEEECCC--CCCCceEEEcCccCCCCEEE
Confidence 6777777889999854 56566677889999999999876655 56555555333 2222 111225689999988
Q ss_pred EEEeEEE
Q 045101 90 LNVPVKV 96 (153)
Q Consensus 90 v~vpv~v 96 (153)
+++.++-
T Consensus 656 ~~~~~~P 662 (692)
T 1vjj_A 656 VRFDILP 662 (692)
T ss_dssp EEEEECC
T ss_pred EEEEEEe
Confidence 8887743
No 21
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=56.52 E-value=8.3 Score=29.50 Aligned_cols=41 Identities=17% Similarity=0.385 Sum_probs=32.4
Q ss_pred EEEEECCCCCCcccccEEEEEEECCEEEEEEECCCCeeEeCCCeEEEEEe
Q 045101 44 DVSIDNPYSHSIPICEISYVLKSDGRVIATGTIPDPGSIKGNDKTVLNVP 93 (153)
Q Consensus 44 ~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~~~~~~Ipa~g~~~v~vp 93 (153)
.|+|.||-++=+.+..+. ++|+.+. +...|+++++..+.++
T Consensus 154 ~l~v~Nptpy~vtl~~l~----~~g~~~~-----~~~mv~P~s~~~~~l~ 194 (221)
T 2co7_B 154 KLKVENPTPFYMNLASVT----VGGKPIT-----GLEYVPPFADKTLNMP 194 (221)
T ss_dssp EEEEEECSSSCBCEEEEE----ETTEECC-----CCCCBCTTEEEEEC--
T ss_pred EEEEECCCCcEEEEEEEe----eCCeecc-----CceeEcCCCceEEecC
Confidence 499999999999998864 5887753 4678999999988776
No 22
>2jwy_A Uncharacterized lipoprotein YAJI; structural genomics, GFT northeast S genomics consortium, NESG, membrane, palmitate, PSI-2; NMR {Escherichia coli}
Probab=54.56 E-value=25 Score=26.03 Aligned_cols=55 Identities=11% Similarity=0.106 Sum_probs=36.8
Q ss_pred eEEEEEEEEceecccceEEEEEEEEECCCCCCcccccEEEEEE------ECCEEEEEEECCCCeeEeC
Q 045101 23 EASLSKFRLKGVSREGVDYLADVSIDNPYSHSIPICEISYVLK------SDGRVIATGTIPDPGSIKG 84 (153)
Q Consensus 23 ~V~l~~v~~~~~~l~~~~~~~~l~V~NPN~~~L~i~~l~y~l~------lng~~ia~G~~~~~~~Ipa 84 (153)
++++..|+. ...|. .+.|+|++.+.-+|| .++-.|+ ..|++......++.+++|+
T Consensus 65 rlsLs~i~p---eA~Gt--rA~L~I~~~~~~~LP--Af~a~veWGqld~~tg~pl~~~~qsQ~i~~~~ 125 (168)
T 2jwy_A 65 RMSLVNITP---DADGT--TLTLRIQGESNDPLP--AFSGTVEYGQIQGTIDNFQEINVQNQLINAPA 125 (168)
T ss_dssp EEEEEEEEE---CSSSE--EEEEEEEESSSSCCC--CEEEEEEEEEECSCSSSCCEEEEEEEEEEECC
T ss_pred EEEEecccc---cCCCc--EEEEEEeCCCCCCCC--cceeEEEeccccCcCCCcccccccceeeecCC
Confidence 455555554 33444 356777888888888 6777776 3567777777777777765
No 23
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=54.35 E-value=53 Score=22.96 Aligned_cols=79 Identities=18% Similarity=0.192 Sum_probs=51.3
Q ss_pred hhhcCccCCeEEEE--EEEEceecccceEEEEEEEEECCCCCCcccccEEEEEEE--CCE----EEEEEECCCCeeEeCC
Q 045101 14 DKVTNMRKPEASLS--KFRLKGVSREGVDYLADVSIDNPYSHSIPICEISYVLKS--DGR----VIATGTIPDPGSIKGN 85 (153)
Q Consensus 14 ~k~~~~~~P~V~l~--~v~~~~~~l~~~~~~~~l~V~NPN~~~L~i~~l~y~l~l--ng~----~ia~G~~~~~~~Ipa~ 85 (153)
+|+.+--.|.+++. .++++.+....- -.-.+.|.|.-..|... .+.. ++. ++.+- .+..++|+++
T Consensus 17 d~~ENe~~P~i~v~~~~ldFG~v~~~~~-~~~~l~I~Ntg~vpa~F-----~f~~~~~~~~~~~~wl~v-~P~~G~L~Pg 89 (140)
T 3qbt_B 17 DRMENDFLPSLELSRREFVFENVKFRQL-QKEKFQISNNGQVPCHF-----SFIPKLNDSQYCKPWLRA-EPFEGYLEPN 89 (140)
T ss_dssp HHHHHHTSCCEEESCCEEEEEEECBTCC-EEEEEEEEECSSSCEEE-----EEECCTTCSSSSCTTEEE-ESCEEEECTT
T ss_pred HHHhhccCCceEeeeeeEEeeeceeeee-eeeEEEEEcCCccceEE-----EEecCCCchhhhhHhhhc-CCcccccCCC
Confidence 34444456887774 566666654433 36689999998888753 3332 111 12222 3677899999
Q ss_pred CeEEEEEeEEEech
Q 045101 86 DKTVLNVPVKVPHS 99 (153)
Q Consensus 86 g~~~v~vpv~v~~~ 99 (153)
++..+.|.+.++-.
T Consensus 90 e~~~I~v~~~v~~~ 103 (140)
T 3qbt_B 90 ETVDISLDVYVSKD 103 (140)
T ss_dssp CEEEEEEEECBCHH
T ss_pred CeeEEEEEEEEccC
Confidence 99999999988763
No 24
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=51.16 E-value=4.6 Score=36.34 Aligned_cols=82 Identities=16% Similarity=0.375 Sum_probs=54.2
Q ss_pred hHhhhhcCccCCeEEEEEEEEceecccceEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEE--ECCCCeeEeCCCeE
Q 045101 11 YVTDKVTNMRKPEASLSKFRLKGVSREGVDYLADVSIDNPYSHSIPICEISYVLKSDGRVIATG--TIPDPGSIKGNDKT 88 (153)
Q Consensus 11 f~~~k~~~~~~P~V~l~~v~~~~~~l~~~~~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G--~~~~~~~Ipa~g~~ 88 (153)
+++|+--.+++|++++ ++.+-...+..+.+.+.++||-+.+| .+..+.++ |--+..+ ...-...|+++++.
T Consensus 576 ~~~~~di~l~~P~l~I---~v~g~~~v~~~~~v~v~f~NPL~~~L--~~c~~~vE--G~GL~~~~~~~~~~~~v~pg~~~ 648 (687)
T 2q3z_A 576 LLAERDLYLENPEIKI---RILGEPKQKRKLVAEVSLQNPLPVAL--EGCTFTVE--GAGLTEEQKTVEIPDPVEAGEEV 648 (687)
T ss_dssp EEEEEEEECBCCCCEE---EEESCCSSSSCEEEEEEEECCSSSCB--CSEEEEEE--CTTTCSSCEEEEECSCBCTTCEE
T ss_pred EEEEEEEEEeCCCEEE---EeCCCcccCCeEEEEEEEECCCCCcc--cceEEEEE--CCCCCCCceEEecCCCcCCCCEE
Confidence 6667777778998755 45555667889999999999876655 55555444 4334333 12211578999998
Q ss_pred EEEEeEEEech
Q 045101 89 VLNVPVKVPHS 99 (153)
Q Consensus 89 ~v~vpv~v~~~ 99 (153)
.+++.++-...
T Consensus 649 ~~~~~~~P~~~ 659 (687)
T 2q3z_A 649 KVRMDLVPLHM 659 (687)
T ss_dssp EEEEEECCCSS
T ss_pred EEEEEEEeccc
Confidence 88887744333
No 25
>2ia7_A Tail lysozyme, putative; NP_952040.1, putative tail lysozyme, structural genomics, JO center for structural genomics, JCSG; 1.44A {Geobacter sulfurreducens} SCOP: d.373.1.1
Probab=47.87 E-value=44 Score=22.95 Aligned_cols=57 Identities=9% Similarity=0.058 Sum_probs=34.2
Q ss_pred hHHhhhhHhhhhcCccCCeEEEEEEEEceec--ccceEEEEEEEEECCCCCCcccccEEEEEEE
Q 045101 5 VDKAKNYVTDKVTNMRKPEASLSKFRLKGVS--REGVDYLADVSIDNPYSHSIPICEISYVLKS 66 (153)
Q Consensus 5 ~~~~~~f~~~k~~~~~~P~V~l~~v~~~~~~--l~~~~~~~~l~V~NPN~~~L~i~~l~y~l~l 66 (153)
...++.-+.+.+..+ .|++++.+|++..-. .....+.+..++..-| . + ..+.|.+++
T Consensus 72 ~~~i~~~i~~al~~~-EPRi~~~~V~v~~~~~~~~~l~i~I~~~~~~~~-~--~-~~l~~~~~l 130 (134)
T 2ia7_A 72 LGLIENEVKEALILW-EPRIELLSVTASPREAAEGRLLIDIEYRVRSTN-T--R-FNLVYPFYL 130 (134)
T ss_dssp HHHHHHHHHHHHHHH-CTTEEEEEEEEECTTGGGTEEEEEEEEEETTTT-E--E-EEEEEEEEC
T ss_pred HHHHHHHHHHHHHHh-CCCeEEEEEEEeecCCCCCEEEEEEEEEEecCC-C--E-EEEEEEEEe
Confidence 345566667777654 599999999986543 2334556666654322 2 1 246666665
No 26
>3zy7_A AP-1 complex subunit gamma-1; endocytosis, protein design, computational design; 1.09A {Mus musculus} PDB: 2a7b_A 1gyv_A 1gyw_A
Probab=44.23 E-value=74 Score=21.76 Aligned_cols=87 Identities=8% Similarity=0.144 Sum_probs=57.1
Q ss_pred EEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEECCCCeeEeCCCeEEEEEeEEEechhHHHHHHhhcCCCccceEEE
Q 045101 40 DYLADVSIDNPYSHSIPICEISYVLKSDGRVIATGTIPDPGSIKGNDKTVLNVPVKVPHSVLVSLVKDIARDWDIDYLLE 119 (153)
Q Consensus 40 ~~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~~~~~~Ipa~g~~~v~vpv~v~~~~l~~~~~~l~~~~~i~Y~l~ 119 (153)
.+.+.+...|-.+. +|.++.+.+-+--..=.+-......+||+++...++=.+++... .+..+.-|++
T Consensus 30 ~~~i~~~~~N~s~~--~it~f~fqaAVPKs~kL~L~p~Sg~~l~p~~~~~itQ~l~i~n~----------~~~~lklR~k 97 (122)
T 3zy7_A 30 VTVITIQASNSTEL--DMTDFVFQAAVPKTFQLQLLSPSSSVVPAFNTGTITQVIKVLNP----------QKQQLRMRIK 97 (122)
T ss_dssp EEEEEEEEEECSSS--CBEEEEEEEECCTTSEEEECCCSCSCBCGGGSCCEEEEEEEECT----------TCCCCCEEEE
T ss_pred eEEEEEEEEECCCC--ccccEEEEEEcCcccEEEecCCCCCccCCCCCCCEEEEEEEECC----------CCCCEEEEEE
Confidence 36777888886654 69999999888766555555566678999555445544555432 2445666666
Q ss_pred EEEEEccCcccceeeeeeeEeEEe-CC
Q 045101 120 VGLIIDLPLIGNFTIPLSTQGEVK-LP 145 (153)
Q Consensus 120 g~l~~~~p~~G~~~ip~~~~G~i~-lp 145 (153)
....++ . -++++.|+++ +|
T Consensus 98 lsY~~~-----g--~~~~E~~~v~~fp 117 (122)
T 3zy7_A 98 LTFNWN-----G--YKVQSEAEVNNFP 117 (122)
T ss_dssp EEEEET-----T--EEEEEEEEECCCC
T ss_pred EEEEEC-----C--EEEEEEEEECCCC
Confidence 666542 2 4789999986 55
No 27
>1l4i_A SFAE protein; periplasmic chaperone, immunoglobulin fold; 2.20A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1
Probab=44.15 E-value=12 Score=28.27 Aligned_cols=40 Identities=13% Similarity=0.381 Sum_probs=31.8
Q ss_pred EEEEECCCCCCcccccEEEEEEECCEEEEEEECCCCeeEeCCCeEEEEEe
Q 045101 44 DVSIDNPYSHSIPICEISYVLKSDGRVIATGTIPDPGSIKGNDKTVLNVP 93 (153)
Q Consensus 44 ~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~~~~~~Ipa~g~~~v~vp 93 (153)
.|.|.||-++=+.+..+. ++|+.+. . ..|+++++..+.++
T Consensus 139 ~l~v~Nptpy~vtl~~l~----~~g~~~~-----~-~mv~P~s~~~~~l~ 178 (206)
T 1l4i_A 139 GLTLFNPTPYYLTVTDLK----AGNKSLE-----N-TMVPPQGKVTVNIP 178 (206)
T ss_dssp -CEEECCSSSCEEEEEEE----ETTEECC-----C-EEECTTCEEECCC-
T ss_pred EEEEECCCCceEEEEEEe----eCCcEee-----e-eEEcCCCcceeecc
Confidence 489999999999998864 5887663 1 79999999988775
No 28
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=41.86 E-value=45 Score=28.22 Aligned_cols=56 Identities=18% Similarity=0.217 Sum_probs=37.7
Q ss_pred ceEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEECCCCeeEeCCCeEEEEEeEEEec
Q 045101 38 GVDYLADVSIDNPYSHSIPICEISYVLKSDGRVIATGTIPDPGSIKGNDKTVLNVPVKVPH 98 (153)
Q Consensus 38 ~~~~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~~~~~~Ipa~g~~~v~vpv~v~~ 98 (153)
+.+..+.++|.|+ ...++.+.++.+++-..-.+.+ ...++++..+.++.+.|+++-
T Consensus 372 g~~~~~~~~vtn~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~t~~~~vt~~~ 427 (601)
T 1w8o_A 372 GQQVTVPVAVTNQ--SGIAVPKPSLQLDASPDWQVQG---SVEPLMPGRQAKGQVTITVPA 427 (601)
T ss_dssp TCEEEEEEEEECC--SSSCBSSCEEEEECCTTSEEEE---EECCBCTTCEEEEEEEEECCT
T ss_pred CceeEEEEEEECC--CceeccCceEEEecCCCcEEec---cccccCCCCceEEEEEEecCC
Confidence 3478999999996 5566677888888754444444 235667766667777776654
No 29
>1klf_A FIMC chaperone, chaperone protein FIMC; adhesin-chaperone complex, mannose-bound, chaperone/adhesin complex complex; HET: MAN; 2.79A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1 PDB: 1kiu_A* 3rfz_C 1qun_A 1bf8_A 1ze3_C 3bwu_C 3jwn_C
Probab=40.27 E-value=13 Score=27.98 Aligned_cols=40 Identities=15% Similarity=0.359 Sum_probs=31.7
Q ss_pred EEEEECCCCCCcccccEEEEEEECCEEEEEEECCCCeeEeCCCeEEEEEe
Q 045101 44 DVSIDNPYSHSIPICEISYVLKSDGRVIATGTIPDPGSIKGNDKTVLNVP 93 (153)
Q Consensus 44 ~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~~~~~~Ipa~g~~~v~vp 93 (153)
.|+|.||-++=+.+..+. ++|+.+ . ...|+++++..+.++
T Consensus 139 ~l~v~Nptpy~vtl~~l~----~~g~~~-----~-~~mv~P~s~~~~~l~ 178 (205)
T 1klf_A 139 SLTLINPTPYYLTVTELN----AGTRVL-----E-NALVPPMGESTVKLP 178 (205)
T ss_dssp EEEEEECSSSCEEEEEEE----SSSSBC-----C-CEEECTTEEEEEECC
T ss_pred EEEEECCCCCEEEEEEEE----eCCccc-----c-cceEcCCCcceeecC
Confidence 489999999999998754 477665 1 259999999888775
No 30
>2kdd_A Borealin; protein dimer, cell cycle, cell division, centromere, chromosomal protein, cytoplasm, mitosis, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=39.08 E-value=3.7 Score=26.41 Aligned_cols=33 Identities=12% Similarity=0.068 Sum_probs=12.2
Q ss_pred EEEEEEECCEEEEEEECCCCeeEeCCCeEEEEEe
Q 045101 60 ISYVLKSDGRVIATGTIPDPGSIKGNDKTVLNVP 93 (153)
Q Consensus 60 l~y~l~lng~~ia~G~~~~~~~Ipa~g~~~v~vp 93 (153)
=-|.+++||.+++ |...--.++|..+...+.+-
T Consensus 6 rvY~iSvNGSPLa-~~~ei~l~vPvG~GesirLL 38 (76)
T 2kdd_A 6 RIYNISGNGSPLA-DSKEIFLTVPVGGGESLRLL 38 (76)
T ss_dssp ---------------CCSCEECCCSSSSSCCCEE
T ss_pred ceEEEeecCCcCC-CCCceEEEeecCCCceeeeh
Confidence 3599999999999 55455568888777666543
No 31
>4gio_A Putative lipoprotein; unknown function; 1.90A {Campylobacter jejuni subsp}
Probab=35.53 E-value=71 Score=21.54 Aligned_cols=61 Identities=15% Similarity=0.189 Sum_probs=39.4
Q ss_pred EEEEECCCCCCcccccEEEEEE---ECCEEEEEE-EC-CCCeeEeCCCeEEEEEeEEEechhHHHHHHhhcCCCccceEE
Q 045101 44 DVSIDNPYSHSIPICEISYVLK---SDGRVIATG-TI-PDPGSIKGNDKTVLNVPVKVPHSVLVSLVKDIARDWDIDYLL 118 (153)
Q Consensus 44 ~l~V~NPN~~~L~i~~l~y~l~---lng~~ia~G-~~-~~~~~Ipa~g~~~v~vpv~v~~~~l~~~~~~l~~~~~i~Y~l 118 (153)
.+.|.|-|..+. .+.|.++ -+|..+... .. -+...|+++++..+.--. +..+..+|||
T Consensus 39 ~v~v~~~s~~~~---~l~Yrf~WyD~~G~~v~~~~~~~W~~~~l~g~~~~~i~~va--------------p~~~A~~fRl 101 (107)
T 4gio_A 39 EFEVILRSTFAK---DVIYKVDWLDKDGFVLRDVLNEDYQALRIPAGQEVILRKLA--------------SDTRANDFRL 101 (107)
T ss_dssp EEEEEECCSSCE---EEEEEEEEECTTSCBCCSSCCCCCEEEEECTTCCEEEEEEC--------------SSTTCCEEEE
T ss_pred EEEEEecCCCce---EEEEEEEEECCCCCCcCCCCCCCCEEEEEcCCCeEEEEEEC--------------CCCCeEEEEE
Confidence 455666777765 4789887 677777553 22 356788888877665432 3456677777
Q ss_pred EEE
Q 045101 119 EVG 121 (153)
Q Consensus 119 ~g~ 121 (153)
..+
T Consensus 102 ~ir 104 (107)
T 4gio_A 102 EIK 104 (107)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 32
>1gyu_A Adapter-related protein complex 1 gamma 1 subunit; clathrin, golgi, adaptin, endocytosis, adaptor; 1.81A {Mus musculus} SCOP: b.1.10.2
Probab=34.98 E-value=1.2e+02 Score=21.34 Aligned_cols=87 Identities=8% Similarity=0.131 Sum_probs=59.2
Q ss_pred EEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEECCCCeeEeCCCeEEEEEeEEEechhHHHHHHhhcCCCccceEEE
Q 045101 40 DYLADVSIDNPYSHSIPICEISYVLKSDGRVIATGTIPDPGSIKGNDKTVLNVPVKVPHSVLVSLVKDIARDWDIDYLLE 119 (153)
Q Consensus 40 ~~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~~~~~~Ipa~g~~~v~vpv~v~~~~l~~~~~~l~~~~~i~Y~l~ 119 (153)
...+.+...|-++ -+|.++.+.+-+---.=.+-......+||+++...|+=.+++.-. .+..+.-|++
T Consensus 48 ~~~i~~~f~N~s~--~~it~f~fQaAVPKs~kLqL~ppSg~~L~p~~~~~ItQ~m~I~n~----------~~~~l~LR~k 115 (140)
T 1gyu_A 48 VTVITIQASNSTE--LDMTDFVFQAAVPKTFQLQLLSPSSSVVPAFNTGTITQVIKVLNP----------QKQQLRMRIK 115 (140)
T ss_dssp EEEEEEEEEECSS--SCBEEEEEEEECCTTCEEEECCCSCSCBCGGGCCCEEEEEEEECT----------TCCCCCEEEE
T ss_pred EEEEEEEEEECCC--CccccEEEEEEcCcccEEEeeCCCCCccCCCCCCCEEEEEEEeCC----------CCCCEEEEEE
Confidence 3677788888544 669999999988776666666677788999776656555555432 2344666666
Q ss_pred EEEEEccCcccceeeeeeeEeEEe-CC
Q 045101 120 VGLIIDLPLIGNFTIPLSTQGEVK-LP 145 (153)
Q Consensus 120 g~l~~~~p~~G~~~ip~~~~G~i~-lp 145 (153)
....++ . -++++.|+++ +|
T Consensus 116 lsY~~~-----g--~~~~E~~~v~~fP 135 (140)
T 1gyu_A 116 LTYNHK-----G--SAMQDLAEVNNFP 135 (140)
T ss_dssp EEEEET-----T--EEEEEEEEECCCC
T ss_pred EEEEEC-----C--eEEEEEEEECCCC
Confidence 666543 2 5689999886 45
No 33
>2xdh_A Cohesin; archaeal protein, cell adhesion; 1.96A {Archaeoglobus fulgidus}
Probab=34.28 E-value=62 Score=23.60 Aligned_cols=49 Identities=16% Similarity=0.310 Sum_probs=34.7
Q ss_pred eEEEEEEEEceecccceEEEEEEEEEC--------------------------CCCCCcccccEEEEEEECCEEEE
Q 045101 23 EASLSKFRLKGVSREGVDYLADVSIDN--------------------------PYSHSIPICEISYVLKSDGRVIA 72 (153)
Q Consensus 23 ~V~l~~v~~~~~~l~~~~~~~~l~V~N--------------------------PN~~~L~i~~l~y~l~lng~~ia 72 (153)
.|.+.--+..+++.+|.-+.+++++.+ ||+.+|.+.++... ..+|.++-
T Consensus 67 ~V~I~isrs~GisG~GsL~~~tFka~g~~~~~~~~~~~~~~~~~~~~~~~~~~~Gs~~ltl~~i~~~-d~~g~~v~ 141 (163)
T 2xdh_A 67 QIKVGIADSNGISGDGSLFYVKFRVTGNEKAEQAENVKGKLRGLGQQLSEITLRNSHALTLQGIEIY-DIDGNSVK 141 (163)
T ss_dssp EEEEEEEEEEEEEEEEEEEEEEEEEC-------------------------CCCCCEEEEEEEEEEE-ETTSCBCC
T ss_pred cEEEEeccCCCcCCceeEEEEEEEEeccccccccccccccccccccccccccCCCCcceEEecceEE-ecCCCeEe
Confidence 444544455888999999999999999 88888888887653 33444433
No 34
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus}
Probab=33.83 E-value=60 Score=29.43 Aligned_cols=95 Identities=15% Similarity=0.157 Sum_probs=50.1
Q ss_pred ecccceEEEEEEEEECCCCCCcccccEEEEEEE---CCEEEEEEECCCCeeEeCCCeEEEEEeEEEechhHHHHHHhhcC
Q 045101 34 VSREGVDYLADVSIDNPYSHSIPICEISYVLKS---DGRVIATGTIPDPGSIKGNDKTVLNVPVKVPHSVLVSLVKDIAR 110 (153)
Q Consensus 34 ~~l~~~~~~~~l~V~NPN~~~L~i~~l~y~l~l---ng~~ia~G~~~~~~~Ipa~g~~~v~vpv~v~~~~l~~~~~~l~~ 110 (153)
++...+++.+.+.|.|...- .+...+.+ +|+.+++... ..++.+.+ .+.+.+.+.-..+ ...
T Consensus 176 ~~~~~a~v~v~~~v~n~~~~-----~~~v~~~l~d~~g~~v~~~~~--~~~~~~~~--~~~~~~~v~~p~L------Wsp 240 (801)
T 3gm8_A 176 QNKQSATYTLSIEIETQEKK-----PIKVKTYLQAPNGSIADTSEK--IFVSSADS--LCFLSGSIRKPLL------WSP 240 (801)
T ss_dssp ETTTEEEEEEEECCBCSCCS-----CEEEEEEEECTTSCEEEEEEE--EEC-------CEEEEEEEESCCB------BCS
T ss_pred cCCCeEEEEEEEEEEeCCCC-----cEEEEEEEECCCCCEEEEEEE--EEEeCCCC--EEEEEEEeCCCcc------cCC
Confidence 34456788888888883322 23333333 6788876642 23344443 3334444442211 123
Q ss_pred CCccceEEEEEEEE--------ccCcccceeeeeeeEeEEeC
Q 045101 111 DWDIDYLLEVGLII--------DLPLIGNFTIPLSTQGEVKL 144 (153)
Q Consensus 111 ~~~i~Y~l~g~l~~--------~~p~~G~~~ip~~~~G~i~l 144 (153)
..+-=|++...+.. ..+ +|-.++.++.++.+-|
T Consensus 241 e~P~LY~l~v~l~~~g~~~D~~~~~-~GfR~ie~~~~~~f~L 281 (801)
T 3gm8_A 241 DSPNVYTLICQLTRDNKILDECRLP-VGFRQLEFNPVSGFLL 281 (801)
T ss_dssp SSBCCEEEEEEEEETTEEEEEEEEE-ECBCCEEEETTTEEEE
T ss_pred CCceEEEEEEEEEECCEEEEEEEee-cCceEEEEecCCeeEE
Confidence 45555998888742 234 7877888775555554
No 35
>4ah6_A Aspartate--tRNA ligase, mitochondrial; 3.70A {Homo sapiens}
Probab=33.16 E-value=30 Score=30.64 Aligned_cols=25 Identities=24% Similarity=0.214 Sum_probs=21.4
Q ss_pred CcccccEEEEEEECCEEEEEEECCC
Q 045101 54 SIPICEISYVLKSDGRVIATGTIPD 78 (153)
Q Consensus 54 ~L~i~~l~y~l~lng~~ia~G~~~~ 78 (153)
|+.+++-+||+.+||..++.|...-
T Consensus 480 p~~~~a~~ydlv~~g~El~~gs~ri 504 (617)
T 4ah6_A 480 PKKARSQHYDLVLNGNEIGGGSIRI 504 (617)
T ss_dssp TTSSBCCCEEEEETTEEEEEEECCC
T ss_pred hhhhhhceEEEEECCEEEeeeeEEc
Confidence 3467899999999999999998654
No 36
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=32.85 E-value=1.2e+02 Score=20.96 Aligned_cols=29 Identities=14% Similarity=0.122 Sum_probs=20.6
Q ss_pred eEEEEEEEEECCCCCCcccccEEEEEEECCEEEE
Q 045101 39 VDYLADVSIDNPYSHSIPICEISYVLKSDGRVIA 72 (153)
Q Consensus 39 ~~~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia 72 (153)
-...+.+|..|... ..-..+|++||....
T Consensus 51 G~Y~l~~ryang~~-----~~r~~~l~VNG~~~~ 79 (145)
T 2w3j_A 51 KTYTAQIRFGNGGT-----SARRATVVVNDSQIK 79 (145)
T ss_dssp EEEEEEEEEECCSS-----SCCCEEEEETTEEEE
T ss_pred eEEEEEEEEECCCC-----CCeEEEEEECCeEee
Confidence 46778888887643 245678899998773
No 37
>3nqn_A Uncharacterized protein; protein with unknown function, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.88A {Deinococcus radiodurans}
Probab=32.46 E-value=44 Score=24.43 Aligned_cols=23 Identities=22% Similarity=0.593 Sum_probs=20.8
Q ss_pred EEEEEEEEccCcccceeeeeeeE
Q 045101 117 LLEVGLIIDLPLIGNFTIPLSTQ 139 (153)
Q Consensus 117 ~l~g~l~~~~p~~G~~~ip~~~~ 139 (153)
+++|.+....|++|..++||...
T Consensus 47 ~l~G~Lr~~~PllGEv~lPF~Sr 69 (158)
T 3nqn_A 47 QVWGELLVTVPLLGEVDLPFRSE 69 (158)
T ss_dssp EEEEEEEEEETTTEEEEEEEEEE
T ss_pred eeEEEEEecccccceeecchhee
Confidence 78999999999999999999874
No 38
>1zki_A Hypothetical protein PA5202; structural genomics, PSI, protein ST initiative, midwest center for structural genomics, MCSG, U function; 1.70A {Pseudomonas aeruginosa} SCOP: d.38.1.5
Probab=32.01 E-value=1.1e+02 Score=20.06 Aligned_cols=70 Identities=7% Similarity=0.023 Sum_probs=42.5
Q ss_pred chhhHHhhhhHhhhhc--CccCCeEEEEEEEEceecccceEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEEC
Q 045101 2 AQLVDKAKNYVTDKVT--NMRKPEASLSKFRLKGVSREGVDYLADVSIDNPYSHSIPICEISYVLKSDGRVIATGTI 76 (153)
Q Consensus 2 ~~~~~~~~~f~~~k~~--~~~~P~V~l~~v~~~~~~l~~~~~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~ 76 (153)
+.|+|-|....+.... +...+.+++ ++++..--. +-++.++.+|.--... ..-++++++-+|+.+++|..
T Consensus 55 ~~l~d~a~~~~~~~~~~~~~~~vt~~l-~i~fl~p~~-g~~l~~~a~v~~~g~~---~~~~~~~i~~~g~~va~a~~ 126 (133)
T 1zki_A 55 FSLMDVTMGLACSSSHGFDRQSVTLEC-KINYIRAVA-DGEVRCVARVLHAGRR---SLVVEAEVRQGDKLVAKGQG 126 (133)
T ss_dssp HHHHHHHHHHHHHHHHCTTSCEEEEEE-EEEECSCCC-SSEEEEEEEEEEECSS---EEEEEEEEEETTEEEEEEEE
T ss_pred HHHHHHHHHHHHHhccCCCCceEEEEE-EEEEECcCC-CCEEEEEEEEEECCce---EEEEEEEEEECCEEEEEEEE
Confidence 5688888887765431 233345565 666655444 5567777776544332 33455666668888887763
No 39
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A*
Probab=30.88 E-value=2.4e+02 Score=26.14 Aligned_cols=113 Identities=11% Similarity=0.136 Sum_probs=63.4
Q ss_pred cCCeEEEEEEEEcee---cccceEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEECCCCeeEeCCCeEEEEEe-EE
Q 045101 20 RKPEASLSKFRLKGV---SREGVDYLADVSIDNPYSHSIPICEISYVLKSDGRVIATGTIPDPGSIKGNDKTVLNVP-VK 95 (153)
Q Consensus 20 ~~P~V~l~~v~~~~~---~l~~~~~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~~~~~~Ipa~g~~~v~vp-v~ 95 (153)
..|.+.|.++.+..- +....++.+++.+.|..+.+. .....+.+.|..+ .+..++++.++..+++. +.
T Consensus 223 ~~~~~~I~d~~v~~~~~~~~~~~~v~v~~~~~~~~~~~~---~~~v~~~~~g~~~-----~~~~~~~~~~~~~~~~~~~~ 294 (1032)
T 2vzs_A 223 RSGAVALRSAHVIQKLNSALDHADLTVKADVRNDSANAV---QTTVAGTVAGKPI-----SQTVSLAAKERKTVTFPLVG 294 (1032)
T ss_dssp EESSEEEEEEEEEEEECTTSSEEEEEEEEEEEECSSSCE---EEEEEEEETTEEE-----EEEEEECTTCEEEEECCCEE
T ss_pred EcCCeEEeccEEEEeecCCCceEEEEEEEEEEeCCCCcE---EEEEEEEEcCcEE-----EEEEEeCCCCceEEEEeeEe
Confidence 467788888887542 124578899999998754332 2223445567653 23356667666666665 65
Q ss_pred EechhHHHHHHhhcCCCccceEEEEEEE--------EccCcccceeeeee----eEeEEeC
Q 045101 96 VPHSVLVSLVKDIARDWDIDYLLEVGLI--------IDLPLIGNFTIPLS----TQGEVKL 144 (153)
Q Consensus 96 v~~~~l~~~~~~l~~~~~i~Y~l~g~l~--------~~~p~~G~~~ip~~----~~G~i~l 144 (153)
+.-.. ++.--.-+.+-=|+++..+. .... +|-++|.+. ..+.+.|
T Consensus 295 v~~p~---LW~p~g~g~P~LY~l~v~l~~~g~~~D~~~~~-~GfR~i~~~~~~~~~~~f~l 351 (1032)
T 2vzs_A 295 LDRPN---VWWPAGMGGQHRYDLDLTASVGGTPSDAAKSK-FGVRDVKATLNSSGGRQYSV 351 (1032)
T ss_dssp EESCC---CCCCTTSSCCCCEEEEEEEEETTEEEEEEEEE-ECCCCEEEEECTTSCEEEEE
T ss_pred cCCCc---ccCCCCCCCcceEEEEEEEEECCeEEEEEEEe-eeeEEEEEEEccCCCceEEE
Confidence 55321 11100012444588888774 2234 677777774 3455544
No 40
>3mx7_A FAS apoptotic inhibitory molecule 1; beta sheet, apoptosis; 1.76A {Homo sapiens}
Probab=29.69 E-value=42 Score=22.30 Aligned_cols=27 Identities=22% Similarity=0.379 Sum_probs=19.4
Q ss_pred EEEEEEEECCCCCCcccccEEEEEEECCEEEE
Q 045101 41 YLADVSIDNPYSHSIPICEISYVLKSDGRVIA 72 (153)
Q Consensus 41 ~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia 72 (153)
..+.+.| -+++-..+.|.|++||+.+-
T Consensus 61 ~k~~I~I-----~a~~~~~y~YtL~VngKslk 87 (90)
T 3mx7_A 61 TKATINI-----DAISGFAYEYTLEINGKSLK 87 (90)
T ss_dssp EEEEEEE-----EEETTTEEEEEEEETTEEEE
T ss_pred eEEEEEE-----EecCCccEEEEEEECCEeHH
Confidence 3445555 24566789999999999875
No 41
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=28.18 E-value=79 Score=24.54 Aligned_cols=44 Identities=18% Similarity=0.325 Sum_probs=31.7
Q ss_pred EEEECCCCCCcccccEEEEEEECCEEEEEEECCCCeeEeCCCeEEEEEeE
Q 045101 45 VSIDNPYSHSIPICEISYVLKSDGRVIATGTIPDPGSIKGNDKTVLNVPV 94 (153)
Q Consensus 45 l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~~~~~~Ipa~g~~~v~vpv 94 (153)
|+|.||-++=+.+..+.. .-+|..+.- ....|+++++..+.++.
T Consensus 175 L~v~Nptpyyvtl~~l~~--~~~~~~~~~----~~~mV~P~s~~~~~l~~ 218 (257)
T 3q48_A 175 VQVNNPTPYYVSFASVEL--IVDGRVMSV----GKGMVAPFSTKEFDWQG 218 (257)
T ss_dssp EEEEECSSSCEEEEEEEE--EETTEEEEE----EEEEECTTEEEEECC--
T ss_pred EEEECCCceEEEEEEEEE--ccCCeeccc----cceeEcCCceeEEecCC
Confidence 899999999999998754 345655421 23579999998887653
No 42
>2g30_A AP-2 complex subunit beta-1; alpha-helical ARH peptide, platform domain, sandwich domain, endocytosis, adaptor, endocytosis/exocytosis complex; 1.60A {Homo sapiens} SCOP: b.1.10.1 d.105.1.1 PDB: 1e42_A 3h1z_A 3hs9_A 2iv9_A 2iv8_A
Probab=28.11 E-value=69 Score=24.95 Aligned_cols=57 Identities=7% Similarity=0.092 Sum_probs=38.9
Q ss_pred eEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEEC-CCCeeEeCCCeEEEEEeEEEe
Q 045101 39 VDYLADVSIDNPYSHSIPICEISYVLKSDGRVIATGTI-PDPGSIKGNDKTVLNVPVKVP 97 (153)
Q Consensus 39 ~~~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~-~~~~~Ipa~g~~~v~vpv~v~ 97 (153)
-.+.+++++.|-... ++.++.-.+.-|--=++-+.. .-+..|+++.+.++.||+..+
T Consensus 55 g~i~l~l~~~N~s~~--~is~faIQfNkNsFGL~p~~~~~~~~~L~pgqs~~v~lpl~~~ 112 (258)
T 2g30_A 55 GHIYMEMNFTNKALQ--HMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTL 112 (258)
T ss_dssp TEEEEEEEEEECSSS--CBCCCEEEECCBTTCCEESSCCCCCSCBCTTCEEEEEEEEESC
T ss_pred CEEEEEEEEecCCcc--ceeeeEEEEcccccCcccCccccCCCccCCCCcEEEEEeeecC
Confidence 346688888886664 777777666655544444332 233569999999999998765
No 43
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.59 E-value=1.2e+02 Score=19.42 Aligned_cols=69 Identities=10% Similarity=0.060 Sum_probs=41.6
Q ss_pred CCeEEE--EEEEEceecccceEEEEEEEEECCCCCCcccccEEEEEEECCEEEE--EEECCCCeeEeCCCeEEEEEeEE
Q 045101 21 KPEASL--SKFRLKGVSREGVDYLADVSIDNPYSHSIPICEISYVLKSDGRVIA--TGTIPDPGSIKGNDKTVLNVPVK 95 (153)
Q Consensus 21 ~P~V~l--~~v~~~~~~l~~~~~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia--~G~~~~~~~Ipa~g~~~v~vpv~ 95 (153)
-|++++ ..++++.+.... .....+.++|.-+.|+.++-.. +..... --..+....|+++++..+.|...
T Consensus 7 ~P~i~~~~~~ldFG~v~~g~-~~~~~~~l~N~g~~p~~~~~~~-----~~~~~~~~f~v~p~~g~i~pg~~~~i~V~f~ 79 (112)
T 2e6j_A 7 GPKIHFNFELLDIGKVFTGS-AHCYEAILYNKGSIDALFNMTP-----PTSALGACFVFSPKEGIIEPSGVQAIQISFS 79 (112)
T ss_dssp CCSEEESCSEEEEEEEESSC-CEEEEEEEEECCSSCEEEEECC-----CSSHHHHHCEEESSEEEECTTBCCEEEEEEC
T ss_pred CCEEEECcccEecEeEEECC-EEEEEEEEEECCcceEEEEEec-----CCccccCcEEEECCcCEECCCCEEEEEEEEE
Confidence 355554 456666665544 4677899999999887764321 110000 11126667899988877776653
No 44
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=27.56 E-value=53 Score=22.83 Aligned_cols=57 Identities=14% Similarity=0.060 Sum_probs=41.9
Q ss_pred ccceEEEEEEEEECCCCCCcccccEEEEEEECC-----EEEEEEECCCCeeEeCCCeEEEEEeEEEe
Q 045101 36 REGVDYLADVSIDNPYSHSIPICEISYVLKSDG-----RVIATGTIPDPGSIKGNDKTVLNVPVKVP 97 (153)
Q Consensus 36 l~~~~~~~~l~V~NPN~~~L~i~~l~y~l~lng-----~~ia~G~~~~~~~Ipa~g~~~v~vpv~v~ 97 (153)
..+-.+.+...|+|=-.-+-+- ..-.++++| ..+.+-. ...|++++++.+.+++.+.
T Consensus 13 ~~g~~vTvsatVkN~Gt~~s~a--~~V~~yl~~p~~gg~~vgt~t---v~~LaaG~s~t~~v~~~~~ 74 (122)
T 2kut_A 13 FEGEEITVSARVTNRGAAEAHN--VPVAVYLGNPAQGGVEIGRDT---ISRIPVGGTGLARVQWKAT 74 (122)
T ss_dssp CTTCEEEEEEEEECCSSSCBCC--CCEEECSSCTTTCCCCCBCCC---CSCBCTTCEEECCEEEECC
T ss_pred CCCCeEEEEEEEEeCCCcccCc--EEEEEEeCCCccCCeEEeeEE---ccccCCCCeEEEEEEEecC
Confidence 4566788888999999887774 455567777 5555433 3579999999988887655
No 45
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=27.47 E-value=1.4e+02 Score=19.99 Aligned_cols=47 Identities=13% Similarity=0.061 Sum_probs=29.3
Q ss_pred EEEEEEECCCCCCcccccEEEEEEECCEEEEEEECCCCeeEeCCCeEEEEEeE
Q 045101 42 LADVSIDNPYSHSIPICEISYVLKSDGRVIATGTIPDPGSIKGNDKTVLNVPV 94 (153)
Q Consensus 42 ~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~~~~~~Ipa~g~~~v~vpv 94 (153)
...+++.||.+. .+.|.+....-+.=.=. +..+.|.++++..|.|-.
T Consensus 18 ~~~l~L~N~t~~-----~vaFKVKtT~p~~y~Vr-P~~G~I~P~~~~~i~I~~ 64 (109)
T 1row_A 18 SSTHKLVNGGAE-----KIVFKIKSSNNNEYRIA-PVFGFVDPSGSKDVVITR 64 (109)
T ss_dssp EEEEEEEECSSS-----CEEEEEEESCSSSEEEE-CSEEEECTTEEEEEEEEE
T ss_pred eEEEEEEcCCCC-----eEEEEEEeCCCCceEEc-CCceEECCCCeEEEEEEe
Confidence 478899999885 45667766543332222 444667777776666543
No 46
>1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A* 1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A* 2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A*
Probab=27.15 E-value=1.2e+02 Score=26.08 Aligned_cols=35 Identities=9% Similarity=0.084 Sum_probs=24.0
Q ss_pred ccEEEEEEECCEEEEEEECCC-----CeeEeCCCeEEEEE
Q 045101 58 CEISYVLKSDGRVIATGTIPD-----PGSIKGNDKTVLNV 92 (153)
Q Consensus 58 ~~l~y~l~lng~~ia~G~~~~-----~~~Ipa~g~~~v~v 92 (153)
.|..|+++.||..+++|.... ...+.+.|+-+++|
T Consensus 50 ~g~~~~v~~dg~~v~t~~~~~~~~~~~~~~~~~g~y~~~v 89 (540)
T 1edq_A 50 TGTTAKVLLNGKEAWSGPSTGSSGTANFKVNKGGRYQMQV 89 (540)
T ss_dssp CCSEEEEEETTEEEEEEECCSSEEEEEEEECSCEEEEEEE
T ss_pred CccEEEEEECCEEEEEEcCCCCcceEEEeecCCceEEEEE
Confidence 567799999999999998763 33444444444443
No 47
>2hz5_A Dynein light chain 2A, cytoplasmic; DNLC2A, transport protein; 2.10A {Homo sapiens} SCOP: d.110.7.1 PDB: 2b95_A
Probab=26.19 E-value=95 Score=20.95 Aligned_cols=47 Identities=26% Similarity=0.351 Sum_probs=24.3
Q ss_pred CchhhHHhhhhHhhhhcCccCCeEEEEEEEEceecc---cceEEEEEEEEECCC
Q 045101 1 MAQLVDKAKNYVTDKVTNMRKPEASLSKFRLKGVSR---EGVDYLADVSIDNPY 51 (153)
Q Consensus 1 ~~~~~~~~~~f~~~k~~~~~~P~V~l~~v~~~~~~l---~~~~~~~~l~V~NPN 51 (153)
|.+|++||+.++.+-- .+-++.+-.++-+.-.. -+-+|.+ +-|+||+
T Consensus 56 i~~L~~~A~~~vr~lD---p~deL~fLRiRTkkhEimIapd~~~~L-iVvQ~~~ 105 (106)
T 2hz5_A 56 MHSFILKARSTVRDID---PQNDLTFLRIRSKKNEIMVAPDKDYFL-IVIQNPT 105 (106)
T ss_dssp HHHHHHHHHHHHHHHC---TTCCEEEEEEEESSCEEEEEC---CEE-EEEECC-
T ss_pred HHHHHHHHHHHHHccC---CCCCeEEEEEEeCCcEEEEEecCCEEE-EEEecCC
Confidence 3578999999987632 23355555444433211 0112222 6788885
No 48
>4i83_A 3-hydroxyacyl-[acyl-carrier-protein] dehydratase; FABZ, hot DOG fold, thioesterase, lyase; 2.60A {Neisseria meningitidis}
Probab=25.33 E-value=1.7e+02 Score=20.18 Aligned_cols=50 Identities=24% Similarity=0.275 Sum_probs=34.7
Q ss_pred EEEEEEEEceecccceEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEEC
Q 045101 24 ASLSKFRLKGVSREGVDYLADVSIDNPYSHSIPICEISYVLKSDGRVIATGTI 76 (153)
Q Consensus 24 V~l~~v~~~~~~l~~~~~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~ 76 (153)
..+.++++...-.-|-++.+++++.-- .-.+..++..++++|+.+++|+.
T Consensus 96 ~gi~~vkF~~pV~PGd~L~i~~~v~~~---~~~~~~~~~~~~v~g~~va~~~l 145 (152)
T 4i83_A 96 AGIDEARFKRQVIPGDQLVFEVELLTS---RRGIGKFNAVAKVDGQVAVEAII 145 (152)
T ss_dssp EEECSEEECSCCCTTCEEEEEEEEEEE---ETTEEEEEEEEEETTEEEEEEEE
T ss_pred eeecEEEEccccCCCCEEEEEEEEEEe---eCCEEEEEEEEEECCEEEEEEEE
Confidence 466777877666666667766666421 22355667778899999999984
No 49
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=25.06 E-value=57 Score=21.79 Aligned_cols=43 Identities=19% Similarity=0.139 Sum_probs=29.9
Q ss_pred ccccEEEEEEECCE-EEEEEECCCCeeEeCCCeEEEEEeEEEec
Q 045101 56 PICEISYVLKSDGR-VIATGTIPDPGSIKGNDKTVLNVPVKVPH 98 (153)
Q Consensus 56 ~i~~l~y~l~lng~-~ia~G~~~~~~~Ipa~g~~~v~vpv~v~~ 98 (153)
.|-.=+.++.+.|. .+-.=...+.+.|||+++-.+++...+.|
T Consensus 46 ~vvsG~~~V~lpg~~ew~~~~aGesF~Vpans~F~l~v~~~~~Y 89 (94)
T 2oyz_A 46 TVVKGALVVKRVGEADWTTYSSGESFDVEGNSSFELQVKDATAY 89 (94)
T ss_dssp EEEESEEEEEETTCSSCEEEETTCEEEECSSEEEEEEESSCEEE
T ss_pred EEEEeEEEEEcCCCCcCEEECCCCEEEECCCCEEEEEEcccEeE
Confidence 33344556667776 56666777889999999888887655544
No 50
>1iu1_A Gamma1-adaptin; coated PITS, endocytosis; 1.80A {Homo sapiens} SCOP: b.1.10.2
Probab=24.63 E-value=1.9e+02 Score=20.38 Aligned_cols=86 Identities=8% Similarity=0.141 Sum_probs=56.8
Q ss_pred EEEEEEEECCCCCCcccccEEEEEEECCEEEEEEECCCCeeEeCCCeEEEEEeEEEechhHHHHHHhhcCCCccceEEEE
Q 045101 41 YLADVSIDNPYSHSIPICEISYVLKSDGRVIATGTIPDPGSIKGNDKTVLNVPVKVPHSVLVSLVKDIARDWDIDYLLEV 120 (153)
Q Consensus 41 ~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~~~~~~Ipa~g~~~v~vpv~v~~~~l~~~~~~l~~~~~i~Y~l~g 120 (153)
..+.+...|-++ -+|.++.+.+-+--..=.+-......+||+++...|+=.+++.-. .+..+.-|++.
T Consensus 55 ~~i~~~f~N~s~--~~it~f~fQaAVPK~~kLqL~ppSg~~L~p~~~~~ItQ~~~I~n~----------~~~~lklR~kl 122 (146)
T 1iu1_A 55 TVITIQASNSTE--LDMTDFVFQAAVPKTFQLQLLSPSSSIVPAFNTGTITQVIKVLNP----------QKQQLRMRIKL 122 (146)
T ss_dssp EEEEEEEEECSS--SCBEEEEEEEECCTTSEEEECCCSCSCBCGGGCCCEEEEEEEECT----------TCCCCCCEEEE
T ss_pred EEEEEEEEeCCC--CccccEEEEEEcCcccEEEeeCCCCCccCCCCCCCEEEEEEEeCC----------CCCCEEEEEEE
Confidence 566777777544 668999998888776666666666778999776656555555432 13446666666
Q ss_pred EEEEccCcccceeeeeeeEeEEe-CC
Q 045101 121 GLIIDLPLIGNFTIPLSTQGEVK-LP 145 (153)
Q Consensus 121 ~l~~~~p~~G~~~ip~~~~G~i~-lp 145 (153)
...++ . -|+++.|+++ +|
T Consensus 123 sY~~~-----g--~~~~E~~~v~~fP 141 (146)
T 1iu1_A 123 TYNHK-----G--SAMQDLAEVNNFP 141 (146)
T ss_dssp EEEET-----T--EEEEEEEECCBCC
T ss_pred EEEEC-----C--eEEEEEEEECCCC
Confidence 66542 2 4788888876 44
No 51
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=24.29 E-value=73 Score=23.67 Aligned_cols=67 Identities=16% Similarity=0.201 Sum_probs=46.9
Q ss_pred cCCeEEE-EEEEEceecccceEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEECCCCeeEeCCCeEEEEEeE
Q 045101 20 RKPEASL-SKFRLKGVSREGVDYLADVSIDNPYSHSIPICEISYVLKSDGRVIATGTIPDPGSIKGNDKTVLNVPV 94 (153)
Q Consensus 20 ~~P~V~l-~~v~~~~~~l~~~~~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~~~~~~Ipa~g~~~v~vpv 94 (153)
..|++++ ..++++.+. +......+.++|--..||.|..+.- ++.-.. ++ .. ...|+++.+..+.|..
T Consensus 116 ~~~~i~~~~~~dfG~i~--g~~~~~~f~i~N~G~~pL~I~~v~~--scgct~-~~--~~-~~~i~PGe~~~i~v~~ 183 (220)
T 2qsv_A 116 QTGVMELSTYLDMGQLD--GETTKAAIEIRNVGAGPLRLHSVTT--RNPALT-AV--PD-RTEIKPGGSTLLRIAV 183 (220)
T ss_dssp GCCCEECCCEEEEEECT--TSCEEEEEEEEECSSSCEEEEEEEE--CSTTEE-EE--ES-CSEECTTCEEEEEEEE
T ss_pred cCCEEEEEeEEeeeccC--CCeEEEEEEEEECCCCCEEEEEEEe--CCCCEe-ee--cC-CccCCCCCEEEEEEEE
Confidence 4566555 688888888 6778889999999999999987753 333322 22 12 3468888887665554
No 52
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A
Probab=24.18 E-value=34 Score=32.03 Aligned_cols=43 Identities=21% Similarity=0.235 Sum_probs=34.2
Q ss_pred EEEEECCCCCCcccccEEEEEEECCEEEEEEECCCCeeEeCCCeEEEEEe
Q 045101 44 DVSIDNPYSHSIPICEISYVLKSDGRVIATGTIPDPGSIKGNDKTVLNVP 93 (153)
Q Consensus 44 ~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~~~~~~Ipa~g~~~v~vp 93 (153)
.++|+|-|.| ..++.+.+ .+|+ .+|... ...|++++++.+++|
T Consensus 661 ~~~i~N~~~F-~~l~~~~~---~~g~--~~g~~~-~~~~~p~~~~~~~l~ 703 (1032)
T 3oba_A 661 SVTITNKHDF-ITTDHLLF---IDKD--TGKTID-VPSLKPEESVTIPSD 703 (1032)
T ss_dssp EEEEEECCSS-CCSTTEEE---EETT--TCCEEC-CCCCCTTCEEEEECC
T ss_pred EEEEEECccC-CCccccEE---eCCe--eeeEEe-ccccCCCceEEEEEC
Confidence 5899999999 47887555 7787 777764 357899999999987
No 53
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=23.96 E-value=1.2e+02 Score=23.88 Aligned_cols=53 Identities=11% Similarity=0.031 Sum_probs=37.6
Q ss_pred EEEEEEECC--CCCCcccccEEEEE-EECCEEEEEEECCCCeeEeCCCeEEEEEeE
Q 045101 42 LADVSIDNP--YSHSIPICEISYVL-KSDGRVIATGTIPDPGSIKGNDKTVLNVPV 94 (153)
Q Consensus 42 ~~~l~V~NP--N~~~L~i~~l~y~l-~lng~~ia~G~~~~~~~Ipa~g~~~v~vpv 94 (153)
.+++++.|- ..+++.+.|-.+.+ ..+|..+..-...+.+.|++.++.++.+..
T Consensus 187 ~vrlrliN~~~~~h~~hlhGh~f~vi~~dG~~~~~p~~~dtv~l~pger~~v~~~a 242 (318)
T 3g5w_A 187 VIRLRLIGAGDHVHAIHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILNM 242 (318)
T ss_dssp EEEEEEEECSSSCEEEEETTSCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEEC
T ss_pred EEEEEEEeCCCceEEEEECCcEEEEEecCCcccCCCccccEEEECCCCEEEEEEEC
Confidence 456667774 34677778877775 467877766556778889998887777664
No 54
>2e9g_A AP-1 complex subunit gamma-2; beta-sandwich, immunoglobulin-like fold, adaptin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.84 E-value=1.8e+02 Score=19.95 Aligned_cols=88 Identities=9% Similarity=0.004 Sum_probs=56.4
Q ss_pred EEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEECCCCeeEeCCCeEEEEEeEEEechhHHHHHHhhcCCCccceEEE
Q 045101 40 DYLADVSIDNPYSHSIPICEISYVLKSDGRVIATGTIPDPGSIKGNDKTVLNVPVKVPHSVLVSLVKDIARDWDIDYLLE 119 (153)
Q Consensus 40 ~~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~~~~~~Ipa~g~~~v~vpv~v~~~~l~~~~~~l~~~~~i~Y~l~ 119 (153)
...+.+...|-++ -+|.++.+.+-+---.=.+-......+||+++...|+=.+++.-. .+..+.-|++
T Consensus 39 ~~~i~~~~~N~s~--~~it~f~fQaAVPK~~kLqL~p~Sg~~l~p~~~~~ItQ~~~i~n~----------~~~~l~lR~k 106 (131)
T 2e9g_A 39 LLLITITATNFSE--GDVTHFICQAAVPKSLQLQLQAPSGNTVPARGGLPITQLFRILNP----------NKAPLRLKLR 106 (131)
T ss_dssp EEEEEEEEEECSS--SCEEEEEEEEECCTTSCCEECCCSCSEECTTTCCCBCCCEEEECT----------TCCCCCEEEE
T ss_pred eEEEEEEEEECCC--CccccEEEEEEcCcccEEEeeCCCCCCcCCCCCCCEEEEEEEeCC----------CCCCEEEEEE
Confidence 3677778888654 568899988887765555555566778998777545444444322 2345655556
Q ss_pred EEEEEccCcccceeeeeeeEeEEe-CCC
Q 045101 120 VGLIIDLPLIGNFTIPLSTQGEVK-LPT 146 (153)
Q Consensus 120 g~l~~~~p~~G~~~ip~~~~G~i~-lp~ 146 (153)
....++ | -++++.|+++ +|.
T Consensus 107 lsY~~~----g---~~~~e~~~v~~fP~ 127 (131)
T 2e9g_A 107 LTYDHF----H---QSVQEIFEVNNLPV 127 (131)
T ss_dssp EEEECS----S---SEEEEEEEECCCCS
T ss_pred EEEEEC----C---eEEEEEEEEccCCh
Confidence 555532 2 4789999886 553
No 55
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=23.39 E-value=1.5e+02 Score=26.63 Aligned_cols=80 Identities=10% Similarity=0.125 Sum_probs=48.5
Q ss_pred CeEEEEEEEEceecccceEEEEEEEEECCCCCCccc--ccEEEEEEECCEEEEE-EECCCCeeEeCCCeEEEEEeEEEec
Q 045101 22 PEASLSKFRLKGVSREGVDYLADVSIDNPYSHSIPI--CEISYVLKSDGRVIAT-GTIPDPGSIKGNDKTVLNVPVKVPH 98 (153)
Q Consensus 22 P~V~l~~v~~~~~~l~~~~~~~~l~V~NPN~~~L~i--~~l~y~l~lng~~ia~-G~~~~~~~Ipa~g~~~v~vpv~v~~ 98 (153)
+.|++ +++..+--.-|.+|.+.+.+.|..+-.-.+ .--.-.++-+|...+. +.....++++++.+..+++ ++.|
T Consensus 480 ~~v~~-~~~~~~~~~~G~df~v~l~~~N~s~~~~~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~~~~~i~~--~i~y 556 (692)
T 1vjj_A 480 PSIIG-KLKVAGMLAVGKEVNLVLLLKNLSRDTKTVTVNMTAWTIIYNGTLVHEVWKDSATMSLDPEEEAEHPI--KISY 556 (692)
T ss_dssp CSEEE-EEEECSCCBTTSCEEEEEEEEECSSSCEEEEEEEEEEEECTTCCEEEEEEEEEEEEEECTTCEEEEEE--EECH
T ss_pred CCeEE-EEEcCCCCCCCCCEEEEEEEEECCCCCEEEEEEEEEEEEeeCCccccceEEeeEEEEECCCceEEEEE--EECH
Confidence 34443 344323334678999999999988865332 2223344457776655 4445678899998876555 5666
Q ss_pred hhHHHH
Q 045101 99 SVLVSL 104 (153)
Q Consensus 99 ~~l~~~ 104 (153)
.+-.+-
T Consensus 557 ~~Y~~~ 562 (692)
T 1vjj_A 557 AQYERY 562 (692)
T ss_dssp HHHHTT
T ss_pred HHHhhh
Confidence 644333
No 56
>3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase, hydro hydrolase inhibitor complex; HET: POY; 1.16A {Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A* 3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A* 3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A* 3as3_A*
Probab=23.39 E-value=1.2e+02 Score=26.27 Aligned_cols=51 Identities=16% Similarity=0.063 Sum_probs=31.7
Q ss_pred cceEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEECCC-----CeeEeCCCeEEEEEe
Q 045101 37 EGVDYLADVSIDNPYSHSIPICEISYVLKSDGRVIATGTIPD-----PGSIKGNDKTVLNVP 93 (153)
Q Consensus 37 ~~~~~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~~~-----~~~Ipa~g~~~v~vp 93 (153)
+...+.+......-| .|++|+|+.||..++++.... ...+.+.++-.++|.
T Consensus 38 ~~~sv~l~W~a~s~~------~g~~y~v~~~g~~v~t~~~~~~~~~~~~~l~~~~~Y~~~V~ 93 (584)
T 3arx_A 38 ELAKIKVKFNQWSGT------SGDTYNVYFDGVKVATGAITGSQTTASFEYGQGGLYQMEIE 93 (584)
T ss_dssp SSEEEEEEEECCSSC------CCSEEEEEETTEEEEEEECCTTEEEEEEEECCCEEEEEEEE
T ss_pred cCceEEEEEecccCC------CCeEEEEEECCEEEEEecCCCCceeEEEeccCCceEEEEEE
Confidence 334555555555444 466799999999999998662 224444444444443
No 57
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=23.21 E-value=1.2e+02 Score=20.58 Aligned_cols=42 Identities=14% Similarity=0.030 Sum_probs=31.1
Q ss_pred cccEEEEEEECCE-EEEEEECCCCeeEeCCCeEEEEEeEEEec
Q 045101 57 ICEISYVLKSDGR-VIATGTIPDPGSIKGNDKTVLNVPVKVPH 98 (153)
Q Consensus 57 i~~l~y~l~lng~-~ia~G~~~~~~~Ipa~g~~~v~vpv~v~~ 98 (153)
|-.=+.++.+.|. .|-.=...+.+.|||+++=.+++...+.|
T Consensus 60 vvsG~l~V~LpG~~eW~~~~aGesF~VpanssF~lkv~~~t~Y 102 (106)
T 3eo6_A 60 VLSGMAYYHAEGANDVQELHAGDSMVIPANQSYRLEVMEPLDY 102 (106)
T ss_dssp EEEEEEEEECTTCSSCEEEETTCEEEECSSSCEEEEEEEEEEE
T ss_pred EEEeEEEEECCCCccCEEECCCCEEEECCCCcEEEEECceEEE
Confidence 4444566677773 46666777889999999999988876665
No 58
>2gll_A FABZ, (3R)-hydroxymyristoyl-acyl carrier protein dehydratase; lyase; 2.20A {Helicobacter pylori} PDB: 2glm_A* 2glp_A* 2glv_A 3dp1_A* 3cf8_A* 3cf9_A* 3d04_A* 3doy_A* 3doz_A* 3dp0_A* 3b7j_A* 3dp2_A* 3dp3_A* 3ed0_A*
Probab=22.80 E-value=2.1e+02 Score=20.27 Aligned_cols=49 Identities=14% Similarity=0.190 Sum_probs=34.7
Q ss_pred EEEEEEEceecccceEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEEC
Q 045101 25 SLSKFRLKGVSREGVDYLADVSIDNPYSHSIPICEISYVLKSDGRVIATGTI 76 (153)
Q Consensus 25 ~l~~v~~~~~~l~~~~~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~ 76 (153)
.+.++++...=.-|-++.+++++..-. =.+..++..++++|+.+++|+.
T Consensus 115 gi~~vkF~~pV~PGD~L~i~v~v~~~~---~~~~~~~~~~~v~g~~va~g~~ 163 (171)
T 2gll_A 115 TIDKVKFRIPVTPGDRLEYHLEVLKHK---GMIWQVGGTAQVDGKVVAEAEL 163 (171)
T ss_dssp EEEEEEECSCCCTTCEEEEEEEEEEES---SSEEEEEEEEEETTEEEEEEEE
T ss_pred eeeEEEECCccCCCCEEEEEEEEEEEe---CCEEEEEEEEEECCEEEEEEEE
Confidence 456777877666677777777775421 2455667778899999999975
No 59
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=22.73 E-value=1.4e+02 Score=24.07 Aligned_cols=82 Identities=20% Similarity=0.169 Sum_probs=46.1
Q ss_pred hhhcCccCCeEEEE--EEEEceecccceEEEEEEEEECCCCCCcccccEEEEEEECCEE----EEEEECCCCeeEeCCCe
Q 045101 14 DKVTNMRKPEASLS--KFRLKGVSREGVDYLADVSIDNPYSHSIPICEISYVLKSDGRV----IATGTIPDPGSIKGNDK 87 (153)
Q Consensus 14 ~k~~~~~~P~V~l~--~v~~~~~~l~~~~~~~~l~V~NPN~~~L~i~~l~y~l~lng~~----ia~G~~~~~~~Ipa~g~ 87 (153)
+|+.+--.|.|++. .++++.+.+.. ...-.+.|.|-..+|....=.. .-++.. |.+- .+..++|+++++
T Consensus 20 d~~en~~~P~v~v~~~~idFg~v~~~~-~~~~~l~i~N~g~~pa~f~f~~---~~~~~~~~~~wl~v-~p~~g~l~Pge~ 94 (366)
T 3qis_A 20 DRMENDFLPSLELSRREFVFENVKFRQ-LQKEKFQISNNGQVPCHFSFIP---KLNDSQYCKPWLRA-EPFEGYLEPNET 94 (366)
T ss_dssp --------CCEEESCSEEEEEEECBTC-CEEEEEEEEECSSSCEEEEEEC---CTTCSSSSCTTEEE-ESCEEEECTTCE
T ss_pred hHHHhccCCeEEEecCeEEeeeeeeCC-eEEEEEEEEecCCceEEEEEEe---CCCCCCCCCCcEEE-eCCccEECCCCE
Confidence 45555567877774 45555555433 4577888999888876552110 011111 1111 256789999999
Q ss_pred EEEEEeEEEechh
Q 045101 88 TVLNVPVKVPHSV 100 (153)
Q Consensus 88 ~~v~vpv~v~~~~ 100 (153)
..|+|.+.++-..
T Consensus 95 ~~i~l~~~v~~~~ 107 (366)
T 3qis_A 95 VDISLDVYVSKDS 107 (366)
T ss_dssp EEEEEEECBCTTT
T ss_pred EEEEEEEEECHHH
Confidence 9999999988743
No 60
>3f5r_A FACT complex subunit POB3; APC7736, FACT complex (SPT16P-POB3P), saccharomyces cerevisi structural genomics, PSI-2; 1.70A {Saccharomyces cerevisiae}
Probab=22.73 E-value=8.7 Score=29.15 Aligned_cols=55 Identities=15% Similarity=0.199 Sum_probs=17.7
Q ss_pred hHHhhhhHhhhhc-CccCCeEEEEEEEEceecccceEEEEEEEEECCCCCCcccccEE
Q 045101 5 VDKAKNYVTDKVT-NMRKPEASLSKFRLKGVSREGVDYLADVSIDNPYSHSIPICEIS 61 (153)
Q Consensus 5 ~~~~~~f~~~k~~-~~~~P~V~l~~v~~~~~~l~~~~~~~~l~V~NPN~~~L~i~~l~ 61 (153)
+++.++|..+... +++.=++++.+..|+.+.+.+.. +.+.|.|.-.|.||+..++
T Consensus 107 ~~~L~~~fk~~f~i~Le~kEls~kGwNWG~~~f~g~~--L~F~v~~KpaFEIPls~VS 162 (191)
T 3f5r_A 107 YNLIKNDFHRRFNIQVEQREHSLRGWNWGKTDLARNE--MVFALNGKPTFEIPYARIN 162 (191)
T ss_dssp HHHHHHHHHHHHCCCCEECSSTTTTC--------------------------------
T ss_pred HHHHHHHHHHHcCCCceeeeeecccccceecEEcCCE--EEEEeCCeeEEEecHHHhh
Confidence 5677778776642 34667888999999999998884 5557889999999998875
No 61
>1u1z_A (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase; fatty acid biosynthesis, hot DOG fold, lyase; 2.50A {Pseudomonas aeruginosa} SCOP: d.38.1.6
Probab=21.21 E-value=2.2e+02 Score=19.95 Aligned_cols=49 Identities=12% Similarity=0.123 Sum_probs=33.8
Q ss_pred EEEEEEEceecccceEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEEC
Q 045101 25 SLSKFRLKGVSREGVDYLADVSIDNPYSHSIPICEISYVLKSDGRVIATGTI 76 (153)
Q Consensus 25 ~l~~v~~~~~~l~~~~~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~ 76 (153)
.+.++++..-=.-|-++.+++++.--. =.+..++.+++++|+.+++|+.
T Consensus 111 gi~~vrF~~pV~pGD~L~~~v~v~~~~---~g~~~~~~~~~v~g~~v~~a~~ 159 (168)
T 1u1z_A 111 GSDKLRFRQPVLPGDQLQLHAKFISVK---RSIWKFDCHATVDDKPVCSAEI 159 (168)
T ss_dssp EEEEEEECSCCCTTCEEEEEEEEEEEE---TTEEEEEEEEEETTEEEEEEEE
T ss_pred eccEEEECCcCCCCCEEEEEEEEEEEe---CCEEEEEEEEEECCEEEEEEEE
Confidence 556777776666666666666664321 1455677888899999999975
No 62
>4h4g_A (3R)-hydroxymyristoyl-[acyl-carrier-protein] DEHY; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Burkholderia thailandensis}
Probab=20.67 E-value=2.3e+02 Score=19.96 Aligned_cols=50 Identities=22% Similarity=0.337 Sum_probs=34.3
Q ss_pred EEEEEEEEceecccceEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEEC
Q 045101 24 ASLSKFRLKGVSREGVDYLADVSIDNPYSHSIPICEISYVLKSDGRVIATGTI 76 (153)
Q Consensus 24 V~l~~v~~~~~~l~~~~~~~~l~V~NPN~~~L~i~~l~y~l~lng~~ia~G~~ 76 (153)
..+.++++.+.=.-|-++.+++++.. ..-.+..++-..+++|+.+++|+.
T Consensus 100 ~~i~~~kF~~~V~PGd~L~i~v~~~~---~~~~~~~~~~~~~v~g~~va~ael 149 (160)
T 4h4g_A 100 VGIDNARFKRVVEPGDQLILNVTFER---YIRGIWKFKAVAEVDGKVAAEAEL 149 (160)
T ss_dssp EEEEEEEECSCCCTTCEEEEEEEEEE---EETTEEEEEEEEEETTEEEEEEEE
T ss_pred eccceEEECcccCCCCEEEEEEEEEE---eeCCEEEEEEEEEECCEEEEEEEE
Confidence 45566667655555556666666653 223467788889999999999984
No 63
>1wj5_A Hypothetical protein (riken cDNA 0610009H20); winged helix, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.4.5.59
Probab=20.42 E-value=39 Score=23.57 Aligned_cols=21 Identities=24% Similarity=0.434 Sum_probs=13.8
Q ss_pred hhhHHhhhhHhhhh-cCccCCe
Q 045101 3 QLVDKAKNYVTDKV-TNMRKPE 23 (153)
Q Consensus 3 ~~~~~~~~f~~~k~-~~~~~P~ 23 (153)
.|-+|||+|+.|+- -+|+..+
T Consensus 20 lLsekikeFL~En~v~sFYq~E 41 (120)
T 1wj5_A 20 LLSEKIKEFLQEKKMQSFYQQE 41 (120)
T ss_dssp HHHHHHHHHHHHHTCSCBCHHH
T ss_pred HHHHHHHHHHHHhhhhhhhHHH
Confidence 46689999999764 3344333
Done!