BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045104
(151 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9WUC4|ATOX1_RAT Copper transport protein ATOX1 OS=Rattus norvegicus GN=Atox1 PE=1
SV=1
Length = 68
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 1 RHVLKVHIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVNVDSAILIKKLVRSGKY 60
+H V + C GC + V ++L K+ GV +ID N+ V + S IL+ L ++GK
Sbjct: 3 KHEFSVDMTCGGCAEAVSRVLNKLGGV-EFNIDLPNKKVCIESEHSSDILLATLNKTGKA 61
Query: 61 VELLSP 66
V L P
Sbjct: 62 VSYLGP 67
>sp|O08997|ATOX1_MOUSE Copper transport protein ATOX1 OS=Mus musculus GN=Atox1 PE=2 SV=1
Length = 68
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 1 RHVLKVHIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVNVDSAILIKKLVRSGKY 60
+H V + C+GC + V ++L K+ GV +ID N+ V + S L+ L ++GK
Sbjct: 3 KHEFSVDMTCEGCAEAVSRVLNKLGGV-EFNIDLPNKKVCIDSEHSSDTLLATLNKTGKA 61
Query: 61 VELLSP 66
V L P
Sbjct: 62 VSYLGP 67
>sp|Q9TT99|ATOX1_CANFA Copper transport protein ATOX1 OS=Canis familiaris GN=ATOX1 PE=3
SV=1
Length = 68
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 1 RHVLKVHIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVNVDSAILIKKLVRSGKY 60
+H V + C+GC V ++L K+ GV ID N+ V ++ IL++ L ++GK
Sbjct: 3 KHEFSVDMTCEGCSNAVSRVLNKLGGV-EFDIDLPNKKVCINSEHSVDILLETLEKTGKA 61
Query: 61 VELLSP 66
V L P
Sbjct: 62 VSYLGP 67
>sp|P40202|CCS1_YEAST Superoxide dismutase 1 copper chaperone OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=CCS1 PE=1
SV=1
Length = 249
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 6 VHIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVNVDSAILIKKLVRSGK 59
+ +HC+ C +K L+ + G+ SL+ D E Q++ V +V + +I L GK
Sbjct: 13 IPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGK 66
>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26
OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1
Length = 153
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 4 LKVHIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVNVDSAILIKKLV-RSGKYVE 62
+KV + C+GC++KV++ + ++GV S+ ++ + V V VD ++ ++ R+GK VE
Sbjct: 30 IKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRTGKKVE 89
Query: 63 LLSPSYYQIL 72
L Y ++
Sbjct: 90 LWPYVPYDVV 99
>sp|Q9XT28|ATOX1_SHEEP Copper transport protein ATOX1 OS=Ovis aries GN=ATOX1 PE=3 SV=1
Length = 68
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 1 RHVLKVHIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVNVDSAILIKKLVRSGKY 60
+H V + C+GC V ++L K+ GV ID N+ V ++ L++ L ++GK
Sbjct: 3 KHEFSVDMTCEGCSNAVTRVLNKLGGV-QFDIDLPNKKVCINSEHSVDTLLETLGKTGKA 61
Query: 61 VELLSP 66
V L P
Sbjct: 62 VSYLGP 67
>sp|Q3T0E0|ATOX1_BOVIN Copper transport protein ATOX1 OS=Bos taurus GN=ATOX1 PE=3 SV=1
Length = 68
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 1 RHVLKVHIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVNVDSAILIKKLVRSGKY 60
+H V + C+GC V ++L K+ GV ID N+ V ++ L++ L ++GK
Sbjct: 3 KHEFSVDMTCEGCSNAVTRVLNKLGGV-QFDIDLPNKKVCINSEHSVDTLLETLGKTGKA 61
Query: 61 VELLSP 66
V L P
Sbjct: 62 VSYLGP 67
>sp|Q9WU84|CCS_MOUSE Copper chaperone for superoxide dismutase OS=Mus musculus GN=Ccs
PE=1 SV=1
Length = 274
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 39/87 (44%)
Query: 4 LKVHIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVNVDSAILIKKLVRSGKYVEL 63
V + CQ C V K L+ + GV ++ + ENQ+V+V + S + L +G+ L
Sbjct: 16 FAVQMSCQSCVDAVHKTLKGVAGVQNVDVQLENQMVLVQTTLPSQEVQALLESTGRQAVL 75
Query: 64 LSPSYYQILNQGKGNFITDDGNRINGM 90
Q+ N G I + I G+
Sbjct: 76 KGMGSSQLQNLGAAVAILEGCGSIQGV 102
>sp|Q9JK72|CCS_RAT Copper chaperone for superoxide dismutase OS=Rattus norvegicus
GN=Ccs PE=1 SV=1
Length = 274
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 38/87 (43%)
Query: 4 LKVHIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVNVDSAILIKKLVRSGKYVEL 63
V + CQ C V K L+ GV ++ + ENQ+V+V + S + L +G+ L
Sbjct: 16 FTVQMSCQSCVDAVHKTLKGAAGVQNVEVQLENQMVLVQTTLPSQEVQALLESTGRQAVL 75
Query: 64 LSPSYYQILNQGKGNFITDDGNRINGM 90
Q+ N G I + + G+
Sbjct: 76 KGMGSSQLKNLGAAVAIMEGSGTVQGV 102
>sp|Q54PZ2|ATOX1_DICDI Copper transport protein ATOX1 homolog OS=Dictyostelium
discoideum GN=atox1 PE=3 SV=2
Length = 67
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 6 VHIHCQGCQQKVKKLLRKIEGVYSLHIDAEN-QVVIVSVNVDSAILIKKLVRSGKYVELL 64
V + C GC + V +L KI+GV ++ ID EN +V S + + L+K + ++GK ++
Sbjct: 7 VDMTCGGCSKAVNAILSKIDGVSNIQIDLENKKVSCESSKMGADELLKNIQKTGKKCSII 66
Query: 65 S 65
+
Sbjct: 67 A 67
>sp|Q6PWT7|CCS_PIG Copper chaperone for superoxide dismutase OS=Sus scrofa GN=CCS
PE=2 SV=1
Length = 274
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 4 LKVHIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVNVDSAILIKKLVRSGKYVEL 63
V + CQ C V + L+ + G+ S+ + ENQ+V+V + S ++ L +G+ L
Sbjct: 16 FAVQMTCQSCVDAVSRSLQGVAGIQSVEVQLENQMVLVQTTLPSQVVQALLEDTGRQAVL 75
>sp|Q6FU61|CCS1_CANGA Superoxide dismutase 1 copper chaperone OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=CCS1 PE=3 SV=1
Length = 239
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 6 VHIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVNVDSAILIKKLVRSGK 59
V +HC C +KK L I G+ L D Q++ V+ V +++I L G+
Sbjct: 14 VPMHCTDCTDDIKKCLNGITGIKDLQFDISQQMMSVNSCVAPSVIINALRDCGR 67
>sp|O14618|CCS_HUMAN Copper chaperone for superoxide dismutase OS=Homo sapiens GN=CCS
PE=1 SV=1
Length = 274
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 38/87 (43%)
Query: 4 LKVHIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVNVDSAILIKKLVRSGKYVEL 63
V + CQ C V+K L+ + GV + + E+Q+V+V + S + L +G+ L
Sbjct: 16 FAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVL 75
Query: 64 LSPSYYQILNQGKGNFITDDGNRINGM 90
Q+ N G I + G+
Sbjct: 76 KGMGSGQLQNLGAAVAILGGPGTVQGV 102
>sp|Q64430|ATP7A_MOUSE Copper-transporting ATPase 1 OS=Mus musculus GN=Atp7a PE=1 SV=3
Length = 1491
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 8 IHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVNVDSAILIKKLVRSGKYVELLSPS 67
+HC+ C ++ L ++ V S+ + EN+ IV N ++++ +++R K +E +SP
Sbjct: 286 MHCKSCVSNIESALSTLQYVSSIVVSLENRSAIVKYN--ASLVTPEMLR--KAIEAISPG 341
Query: 68 YYQI 71
Y++
Sbjct: 342 QYRV 345
>sp|Q64535|ATP7B_RAT Copper-transporting ATPase 2 OS=Rattus norvegicus GN=Atp7b PE=2
SV=1
Length = 1451
Score = 34.3 bits (77), Expect = 0.32, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 8 IHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVNVDSAILIKKLVRSGKYVELLSPS 67
+HC+ C ++ + ++ GV ++H+ EN+ V DS+ + +++ +E L P
Sbjct: 265 MHCKSCVLNIEGNIGQLPGVQNIHVSLENKT--AQVQYDSSCITPLFLQTA--IEALPPG 320
Query: 68 YYQI 71
Y+++
Sbjct: 321 YFKV 324
>sp|P70705|ATP7A_RAT Copper-transporting ATPase 1 OS=Rattus norvegicus GN=Atp7a PE=1
SV=1
Length = 1492
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 8 IHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVNVDSAILIKKLVRSGKYVELLSPS 67
+HC+ C ++ L ++ V S+ + EN+ IV N ++++ +++R K +E +SP
Sbjct: 286 MHCKSCVSNIESALSTLQYVSSIVVSLENRSAIVKYN--ASLVTPEILR--KAIEAVSPG 341
Query: 68 YYQI 71
Y++
Sbjct: 342 QYRV 345
>sp|P49015|ATP7A_CRIGR Copper-transporting ATPase 1 (Fragment) OS=Cricetulus griseus
GN=ATP7A PE=2 SV=1
Length = 1476
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 8 IHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVNVDSAILIKKLVRSGKYVELLSPS 67
+HC+ C ++ L ++ V S+ + EN+ IV N S++ + L+ K +E +SP
Sbjct: 285 MHCKSCVSNIESALPTLQYVSSIAVSLENRSAIVKYNA-SSVTPEMLI---KAIEAVSPG 340
Query: 68 YYQI 71
Y++
Sbjct: 341 QYRV 344
>sp|Q04656|ATP7A_HUMAN Copper-transporting ATPase 1 OS=Homo sapiens GN=ATP7A PE=1 SV=3
Length = 1500
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 8 IHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVNVDSAILIKKLVRSGKYVELLSPS 67
+HC+ C ++ L ++ V S+ + EN+ IV N S + + +R K +E +SP
Sbjct: 286 MHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVKYNASS--VTPESLR--KAIEAVSPG 341
Query: 68 YYQI 71
Y++
Sbjct: 342 LYRV 345
>sp|P29978|Y1448_NOSS1 Uncharacterized protein alr1448 OS=Nostoc sp. (strain PCC 7120 /
UTEX 2576) GN=alr1448 PE=4 SV=3
Length = 384
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 99 FPQFLGNDVQDQWGLSNHLNQNVEMAA--VRSENSMVATNENNYVGDYKDTP 148
F F G D+Q +W S LN +A V S N+ V TN GDY D P
Sbjct: 298 FELFTGPDLQKRWESSLGLNPLPALAPNNVYSHNATVLTNRQIDHGDYFDAP 349
>sp|Q6CIG2|CCS1_KLULA Superoxide dismutase 1 copper chaperone OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=CCS1 PE=3 SV=1
Length = 245
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/54 (22%), Positives = 29/54 (53%)
Query: 6 VHIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVNVDSAILIKKLVRSGK 59
V +HC+ C ++K L+ + G+ ++ D ++ ++ V + + +I L G+
Sbjct: 15 VEMHCESCTNDIQKCLKDVNGIKNVTFDIKDNLMNVEGHAAPSAIINALKNCGR 68
>sp|P13113|MERP_SERMA Mercuric transport protein periplasmic component OS=Serratia
marcescens GN=merP PE=1 SV=1
Length = 91
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 8 IHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVNVDSAILIKKLVRS 57
+ C C VKK + K+EGV +++ E + +V+ + D+ ++KL ++
Sbjct: 31 MTCSACPITVKKAISKVEGVSKVNVTFETREAVVTFD-DAKTSVQKLTKA 79
>sp|P04129|MERP_SHIFL Mercuric transport protein periplasmic component OS=Shigella
flexneri GN=merP PE=1 SV=1
Length = 91
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 8 IHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVNVDSAILIKKLVRS 57
+ C C VKK L K+EGV + + E + +V+ + D+ ++KL ++
Sbjct: 31 MTCAACPITVKKALSKVEGVSKVDVGFEKREAVVTFD-DTKASVQKLTKA 79
>sp|P38636|ATX1_YEAST Metal homeostasis factor ATX1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ATX1 PE=1 SV=1
Length = 73
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 6 VHIHCQGCQQKVKKLLRKIE-GVYSLHIDAENQVVIVSVNVDSAILIKKLVRSGKYV 61
V + C GC V K+L K+E V + I E Q+V V + +++K+ ++GK V
Sbjct: 11 VVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEV 67
>sp|P94186|MERP_ALCSP Mercuric transport protein periplasmic component OS=Alcaligenes
sp. GN=merP PE=3 SV=1
Length = 91
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 8 IHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVNVDSAILIKKLVRS 57
+ C C VKK + K+EGV + + E + +V+ + D+ ++KL ++
Sbjct: 31 MTCSTCPITVKKAISKVEGVSKIDVTFETREAVVTFD-DAKTSVQKLTKA 79
>sp|B4RTX3|QUEC_ALTMD 7-cyano-7-deazaguanine synthase OS=Alteromonas macleodii (strain
DSM 17117 / Deep ecotype) GN=queC PE=3 SV=1
Length = 218
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 34 AENQVVIVSVNVDSAILIKKLVRSGKYVELLSPSYYQ 70
+EN VVI S +DS ++ K +R+GK V LS Y Q
Sbjct: 2 SENVVVIYSGGMDSFTVLHKALRAGKKVHALSFDYGQ 38
>sp|Q51770|MERP_PSEFL Mercuric transport protein periplasmic component OS=Pseudomonas
fluorescens GN=merP PE=3 SV=1
Length = 91
Score = 30.0 bits (66), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 8 IHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVNVDSAILIKKLVRS 57
+ C C VKK + K++GV + + E + +V+ + D+ ++KL ++
Sbjct: 31 MTCSACPITVKKAISKVDGVSKVDVTFETREAVVTFD-DAKTSVQKLTKA 79
>sp|O74735|ATX1_SCHPO Metal homeostasis factor atx1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=atx1 PE=3 SV=1
Length = 68
Score = 30.0 bits (66), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 6 VHIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVNVDSAIL---IKKL---VRSGK 59
V + C GC+ + ++L ++ GV I E Q VIV+ + ++ IKK VRSGK
Sbjct: 7 VAMACDGCKNAIDRVLTRL-GVEDKSISVEKQEVIVTTDKPYELVEQTIKKTGKEVRSGK 65
Query: 60 YVE 62
+E
Sbjct: 66 VLE 68
>sp|Q8TFG6|PPK18_SCHPO Serine/threonine-protein kinase ppk18 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ppk18 PE=3 SV=2
Length = 1318
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 19 KLLRKIEGVYSLHIDAENQVVIVSVNVDSAILIKKLVRSGKYVELLSPSYYQILNQGKGN 78
K+ I+ +Y L +D + V+ S N I L +GK LLS S +I N
Sbjct: 13 KVNHGIDNIYVLELDLDGSVLFASTNFSQITGISSLELTGKPAALLS-SDQEIFNAAIEQ 71
Query: 79 FITDDGNRI 87
+ DD + +
Sbjct: 72 LLDDDSHSV 80
>sp|Q64446|ATP7B_MOUSE Copper-transporting ATPase 2 OS=Mus musculus GN=Atp7b PE=1 SV=2
Length = 1462
Score = 29.6 bits (65), Expect = 6.7, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 8 IHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVNVDSAILIKKLVRSGKYVELLSPS 67
+HC+ C ++ + ++ GV ++H+ EN+ + D + + +++ +E L P
Sbjct: 276 MHCKSCVLNIEGNIGQLPGVQNIHVSLENKT--AQIQYDPSCVTPMFLQTA--IEALPPG 331
Query: 68 YYQI 71
++++
Sbjct: 332 HFKV 335
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,514,078
Number of Sequences: 539616
Number of extensions: 2244128
Number of successful extensions: 5800
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 5765
Number of HSP's gapped (non-prelim): 63
length of query: 151
length of database: 191,569,459
effective HSP length: 107
effective length of query: 44
effective length of database: 133,830,547
effective search space: 5888544068
effective search space used: 5888544068
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)