Query         045104
Match_columns 151
No_of_seqs    231 out of 1162
Neff          6.9 
Searched_HMMs 13730
Date          Mon Mar 25 17:21:49 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045104.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045104hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1qupa2 d.58.17.1 (A:2-73) Cop  99.7 2.5E-16 1.8E-20  101.9   8.8   64    2-65      8-71  (72)
  2 d1fe0a_ d.58.17.1 (A:) ATX1 me  99.7 2.4E-16 1.8E-20  100.4   8.5   63    2-65      3-65  (66)
  3 d1cc8a_ d.58.17.1 (A:) ATX1 me  99.6 1.8E-15 1.3E-19   97.8   9.3   62    1-62      5-67  (72)
  4 d1cpza_ d.58.17.1 (A:) Copper   99.6 1.8E-15 1.3E-19   96.5   9.2   62    3-64      3-68  (68)
  5 d2ggpb1 d.58.17.1 (B:1-72) Cop  99.6 8.5E-16 6.2E-20   99.2   7.1   65    1-65      3-70  (72)
  6 d1sb6a_ d.58.17.1 (A:) Copper   99.6   4E-16 2.9E-20   98.6   4.8   62    1-62      2-64  (64)
  7 d1osda_ d.58.17.1 (A:) Mercuri  99.6 3.9E-15 2.8E-19   96.0   8.9   64    1-64      4-71  (72)
  8 d2aw0a_ d.58.17.1 (A:) Menkes   99.6 3.4E-15 2.5E-19   96.1   8.5   63    2-64      5-71  (72)
  9 d1kvja_ d.58.17.1 (A:) Menkes   99.6 5.7E-15 4.1E-19   96.8   9.0   66    1-66      9-78  (79)
 10 d2qifa1 d.58.17.1 (A:1-69) Cop  99.5 1.4E-14 1.1E-18   92.4   9.3   60    2-61      4-67  (69)
 11 d1q8la_ d.58.17.1 (A:) Menkes   99.5 6.8E-15   5E-19   97.6   7.6   65    2-66     11-79  (84)
 12 d1p6ta2 d.58.17.1 (A:73-151) P  99.5 1.3E-14 9.7E-19   95.0   7.7   65    2-66      4-72  (79)
 13 d1p6ta1 d.58.17.1 (A:1-72) Pot  99.5 2.1E-14 1.6E-18   92.3   7.9   61    1-61      7-71  (72)
 14 d1mwza_ d.58.17.1 (A:) Metal i  99.5 3.8E-14 2.7E-18   91.5   8.4   63    1-63      4-68  (73)
 15 d1dcja_ d.68.3.3 (A:) SirA {Es  74.9     4.2 0.00031   24.3   5.7   54    2-64     10-66  (81)
 16 d2cu6a1 d.52.8.2 (A:6-96) Hypo  72.9     1.7 0.00013   26.9   3.6   22   14-35     56-77  (91)
 17 d1jdqa_ d.68.3.3 (A:) Hypothet  69.5     8.8 0.00064   23.8   6.6   52    2-62     27-81  (98)
 18 d1uwda_ d.52.8.2 (A:) Hypothet  68.2     2.3 0.00017   27.0   3.4   22   14-35     61-82  (102)
 19 d2raqa1 d.58.61.1 (A:3-95) Unc  65.6      11 0.00077   23.6   6.1   51   14-64     19-77  (93)
 20 d3bpda1 d.58.61.1 (A:1-91) Unc  65.6      11 0.00082   23.4   6.3   48   17-64     22-77  (91)
 21 d1je3a_ d.68.3.3 (A:) hypothet  50.6     4.8 0.00035   25.1   2.5   53    3-64     29-84  (97)
 22 d1nwaa_ d.58.28.1 (A:) Peptide  48.0      15  0.0011   25.0   5.1   46   11-56     13-76  (168)
 23 d2ffma1 d.267.1.1 (A:1-83) Hyp  46.7      25  0.0018   20.9   5.5   37   19-57     43-81  (83)
 24 d1ff3a_ d.58.28.1 (A:) Peptide  44.9      19  0.0014   25.6   5.3   46   11-56     49-116 (211)
 25 d1iwga1 d.58.44.1 (A:38-134) M  29.4      45  0.0033   20.0   4.7   42   14-55     25-71  (97)
 26 d1okga3 d.26.1.3 (A:302-373) 3  26.7      15  0.0011   21.4   1.7   41    2-42     21-62  (72)
 27 d1fvga_ d.58.28.1 (A:) Peptide  24.3      22  0.0016   24.7   2.7   46   11-56     44-111 (192)
 28 d1pava_ d.68.3.3 (A:) Hypothet  23.0      17  0.0012   21.1   1.5   50    4-62      9-61  (78)
 29 d1iloa_ c.47.1.1 (A:) MTH985,   21.0      30  0.0022   20.4   2.4   26    2-28      2-31  (77)
 30 d2zoda1 d.79.4.1 (A:3-154) Sel  20.9      10 0.00076   25.3   0.2   13    7-19      5-17  (152)

No 1  
>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.65  E-value=2.5e-16  Score=101.95  Aligned_cols=64  Identities=27%  Similarity=0.533  Sum_probs=60.7

Q ss_pred             EEEEEcCcCHhHHHHHHHHHhccCCeeEEEEeccCCEEEEEeeCCHHHHHHHHHhCCCcEEEcC
Q 045104            2 HVLKVHIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVNVDSAILIKKLVRSGKYVELLS   65 (151)
Q Consensus         2 ~~l~Vgm~C~~C~~kIek~L~~~~GV~~v~Vn~~~~~v~V~~~~~~~~I~~~I~k~Gy~a~l~~   65 (151)
                      .+|+|+|+|++|+++|+++|.+++||.++.+|+.+++++|.+.+++++|+++|+++||+|.+..
T Consensus         8 ~~f~V~M~C~~C~~~Iek~l~~~~gV~~v~vdl~~~~v~V~~~~~~~~i~~~I~~~G~~A~l~g   71 (72)
T d1qupa2           8 ATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRG   71 (72)
T ss_dssp             EEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEEC
T ss_pred             EEEEEccCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEeeCCHHHHHHHHHHhCCCEEEec
Confidence            4678899999999999999999999999999999999999999999999999999999998754


No 2  
>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]}
Probab=99.65  E-value=2.4e-16  Score=100.43  Aligned_cols=63  Identities=32%  Similarity=0.588  Sum_probs=59.7

Q ss_pred             EEEEEcCcCHhHHHHHHHHHhccCCeeEEEEeccCCEEEEEeeCCHHHHHHHHHhCCCcEEEcC
Q 045104            2 HVLKVHIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVNVDSAILIKKLVRSGKYVELLS   65 (151)
Q Consensus         2 ~~l~Vgm~C~~C~~kIek~L~~~~GV~~v~Vn~~~~~v~V~~~~~~~~I~~~I~k~Gy~a~l~~   65 (151)
                      ++|+|+|+|.+|+.+|+++|++++|+ ++.+|+.+++++|.+++++++|+++|+++||++.++.
T Consensus         3 ~ef~V~M~C~~C~~~I~~aL~~~~gv-~v~v~~~~~~v~V~~~~~~~~i~~~I~~~Gy~a~lig   65 (66)
T d1fe0a_           3 HEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLG   65 (66)
T ss_dssp             EEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEE
T ss_pred             EEEEEccCchHHHHHHHHHHhcCCCc-EEEEEcCCCEEEEEeeCCHHHHHHHHHHhCCeEEEee
Confidence            68999999999999999999999998 6999999999999999999999999999999998763


No 3  
>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.61  E-value=1.8e-15  Score=97.83  Aligned_cols=62  Identities=29%  Similarity=0.513  Sum_probs=58.7

Q ss_pred             CEEEEEcCcCHhHHHHHHHHHhcc-CCeeEEEEeccCCEEEEEeeCCHHHHHHHHHhCCCcEE
Q 045104            1 RHVLKVHIHCQGCQQKVKKLLRKI-EGVYSLHIDAENQVVIVSVNVDSAILIKKLVRSGKYVE   62 (151)
Q Consensus         1 ~~~l~Vgm~C~~C~~kIek~L~~~-~GV~~v~Vn~~~~~v~V~~~~~~~~I~~~I~k~Gy~a~   62 (151)
                      +++|+|+|+|++|+.+|+++|.++ +||.++.+|+.+++++|.+.+++++|.++|+++||++.
T Consensus         5 t~~f~V~MtC~~C~~~Ie~~L~~l~~gV~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~   67 (72)
T d1cc8a_           5 HYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVR   67 (72)
T ss_dssp             EEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEE
T ss_pred             EEEEEECcCcHHHHHHHHHHHHcCcCceEEEEEECCCCEEEEeecCCHHHHHHHHHHHCCccC
Confidence            467899999999999999999999 59999999999999999999999999999999999885


No 4  
>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}
Probab=99.61  E-value=1.8e-15  Score=96.55  Aligned_cols=62  Identities=16%  Similarity=0.432  Sum_probs=58.1

Q ss_pred             EEEE-cCcCHhHHHHHHHHHhccCCeeEEEEeccCCEEEEEee---CCHHHHHHHHHhCCCcEEEc
Q 045104            3 VLKV-HIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVN---VDSAILIKKLVRSGKYVELL   64 (151)
Q Consensus         3 ~l~V-gm~C~~C~~kIek~L~~~~GV~~v~Vn~~~~~v~V~~~---~~~~~I~~~I~k~Gy~a~l~   64 (151)
                      +|+| ||+|++|+.+|+++|.+++||.+++||+.+++++|..+   +++++|.++|+++||+++++
T Consensus         3 el~V~GM~C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~vi   68 (68)
T d1cpza_           3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEVI   68 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEEC
T ss_pred             EEEECCeEcHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEEC
Confidence            6899 99999999999999999999999999999999999853   68999999999999998763


No 5  
>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.60  E-value=8.5e-16  Score=99.17  Aligned_cols=65  Identities=22%  Similarity=0.374  Sum_probs=60.0

Q ss_pred             CEEEEE-cCcCHhHHHHHHHHHhccCCeeEEEEeccCCEEEEEe--eCCHHHHHHHHHhCCCcEEEcC
Q 045104            1 RHVLKV-HIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSV--NVDSAILIKKLVRSGKYVELLS   65 (151)
Q Consensus         1 ~~~l~V-gm~C~~C~~kIek~L~~~~GV~~v~Vn~~~~~v~V~~--~~~~~~I~~~I~k~Gy~a~l~~   65 (151)
                      ++.|+| ||+|++|+.+|+++|.+++||.+++||+.+++++|..  .+++++|.++|+++||+++++.
T Consensus         3 ~v~l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~a~~~~   70 (72)
T d2ggpb1           3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR   70 (72)
T ss_dssp             EEEEECTTCCSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSSCCHHHHHHHHHHTTCCCEEEE
T ss_pred             EEEEEECCcccHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCHHHHHHHHHHhCCCeEEcc
Confidence            367999 9999999999999999999999999999999999985  3789999999999999998764


No 6  
>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}
Probab=99.59  E-value=4e-16  Score=98.64  Aligned_cols=62  Identities=21%  Similarity=0.398  Sum_probs=58.8

Q ss_pred             CEEEEE-cCcCHhHHHHHHHHHhccCCeeEEEEeccCCEEEEEeeCCHHHHHHHHHhCCCcEE
Q 045104            1 RHVLKV-HIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVNVDSAILIKKLVRSGKYVE   62 (151)
Q Consensus         1 ~~~l~V-gm~C~~C~~kIek~L~~~~GV~~v~Vn~~~~~v~V~~~~~~~~I~~~I~k~Gy~a~   62 (151)
                      +++|+| ||+|++|+.+|+++|++++||.++.+|+.+++++|.+++++++|.++|.++||+++
T Consensus         2 t~~l~V~gM~C~~C~~~Ie~~l~~~~gv~~v~v~~~~~~v~v~~~~~~~~i~~~i~~~GY~ve   64 (64)
T d1sb6a_           2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGHEVE   64 (64)
T ss_dssp             EEEEECTTTTSSSCTHHHHHHHHHHCTTCEEEEETTTTEEEEESSSCHHHHHHHHHHHCCCCC
T ss_pred             eEEEEECCccchhHHHHHHHHHhcCCCeeEEEccCCCCEEEEccCCCHHHHHHHHHHcCCCCC
Confidence            367999 99999999999999999999999999999999999999999999999999999863


No 7  
>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}
Probab=99.58  E-value=3.9e-15  Score=95.98  Aligned_cols=64  Identities=25%  Similarity=0.407  Sum_probs=59.2

Q ss_pred             CEEEEE-cCcCHhHHHHHHHHHhccCCeeEEEEeccCCEEEEEee---CCHHHHHHHHHhCCCcEEEc
Q 045104            1 RHVLKV-HIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVN---VDSAILIKKLVRSGKYVELL   64 (151)
Q Consensus         1 ~~~l~V-gm~C~~C~~kIek~L~~~~GV~~v~Vn~~~~~v~V~~~---~~~~~I~~~I~k~Gy~a~l~   64 (151)
                      ++.|+| ||+|++|+++|++.|.+++||.++++|+.++++.|..+   +++++|.+.|+++||++.+.
T Consensus         4 t~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~a~v~   71 (72)
T d1osda_           4 TVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK   71 (72)
T ss_dssp             EEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred             EEEEEECCcccHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhcCCCeEeC
Confidence            467999 99999999999999999999999999999999999853   68999999999999998863


No 8  
>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58  E-value=3.4e-15  Score=96.11  Aligned_cols=63  Identities=21%  Similarity=0.344  Sum_probs=58.7

Q ss_pred             EEEEE-cCcCHhHHHHHHHHHhccCCeeEEEEeccCCEEEEEee---CCHHHHHHHHHhCCCcEEEc
Q 045104            2 HVLKV-HIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVN---VDSAILIKKLVRSGKYVELL   64 (151)
Q Consensus         2 ~~l~V-gm~C~~C~~kIek~L~~~~GV~~v~Vn~~~~~v~V~~~---~~~~~I~~~I~k~Gy~a~l~   64 (151)
                      ..|+| ||+|++|+.+|+++|.+++||.++.||+.+++++|.++   +++++|.++|+++||++.+.
T Consensus         5 ~~l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~l~   71 (72)
T d2aw0a_           5 TVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS   71 (72)
T ss_dssp             EEEEEECCCSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSEEEEC
T ss_pred             EEEEECCcccHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEeC
Confidence            57999 99999999999999999999999999999999999853   68999999999999998764


No 9  
>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57  E-value=5.7e-15  Score=96.80  Aligned_cols=66  Identities=15%  Similarity=0.326  Sum_probs=61.3

Q ss_pred             CEEEEE-cCcCHhHHHHHHHHHhccCCeeEEEEeccCCEEEEEee---CCHHHHHHHHHhCCCcEEEcCC
Q 045104            1 RHVLKV-HIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVN---VDSAILIKKLVRSGKYVELLSP   66 (151)
Q Consensus         1 ~~~l~V-gm~C~~C~~kIek~L~~~~GV~~v~Vn~~~~~v~V~~~---~~~~~I~~~I~k~Gy~a~l~~~   66 (151)
                      ++.|.| ||+|++|+++|+++|++++||.++.+|+.+++++|..+   +++.+|.++|+++||++.+..+
T Consensus         9 ~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~GY~~~~~~~   78 (79)
T d1kvja_           9 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHNP   78 (79)
T ss_dssp             EEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECSC
T ss_pred             EEEEEECCeecHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHhcCCCcEeCCC
Confidence            367999 99999999999999999999999999999999999854   7999999999999999988765


No 10 
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}
Probab=99.55  E-value=1.4e-14  Score=92.45  Aligned_cols=60  Identities=27%  Similarity=0.447  Sum_probs=56.5

Q ss_pred             EEEEE-cCcCHhHHHHHHHHHhccCCeeEEEEeccCCEEEEEee---CCHHHHHHHHHhCCCcE
Q 045104            2 HVLKV-HIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVN---VDSAILIKKLVRSGKYV   61 (151)
Q Consensus         2 ~~l~V-gm~C~~C~~kIek~L~~~~GV~~v~Vn~~~~~v~V~~~---~~~~~I~~~I~k~Gy~a   61 (151)
                      .+|+| ||+|++|+.+|+++|++++||.++.+|+.+++++|..+   +++++|.+.|+++||++
T Consensus         4 ~tl~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~~   67 (69)
T d2qifa1           4 KTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV   67 (69)
T ss_dssp             EEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred             EEEEECCccCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHHhCCcc
Confidence            57999 99999999999999999999999999999999999853   68999999999999986


No 11 
>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54  E-value=6.8e-15  Score=97.63  Aligned_cols=65  Identities=17%  Similarity=0.333  Sum_probs=60.1

Q ss_pred             EEEEE-cCcCHhHHHHHHHHHhccCCeeEEEEeccCCEEEEEee---CCHHHHHHHHHhCCCcEEEcCC
Q 045104            2 HVLKV-HIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVN---VDSAILIKKLVRSGKYVELLSP   66 (151)
Q Consensus         2 ~~l~V-gm~C~~C~~kIek~L~~~~GV~~v~Vn~~~~~v~V~~~---~~~~~I~~~I~k~Gy~a~l~~~   66 (151)
                      +.|+| ||+|++|+++|+++|.+++||.++++|+.+++++|..+   ++++.|.+.|+++||++.+...
T Consensus        11 v~l~V~GMtC~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~~~~~~~i~~~I~~~Gy~a~~~~~   79 (84)
T d1q8la_          11 LKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQ   79 (84)
T ss_dssp             EEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCC
T ss_pred             EEEEECCeEcHHHHHHHHHHHhcCCCceEEEEECCCCEEceeecccccCHHHHHHHHHHhCCccEEcCC
Confidence            57999 99999999999999999999999999999999999854   7899999999999999987654


No 12 
>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}
Probab=99.53  E-value=1.3e-14  Score=95.00  Aligned_cols=65  Identities=23%  Similarity=0.381  Sum_probs=60.4

Q ss_pred             EEEEE-cCcCHhHHHHHHHHHhccCCeeEEEEeccCCEEEEEee---CCHHHHHHHHHhCCCcEEEcCC
Q 045104            2 HVLKV-HIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVN---VDSAILIKKLVRSGKYVELLSP   66 (151)
Q Consensus         2 ~~l~V-gm~C~~C~~kIek~L~~~~GV~~v~Vn~~~~~v~V~~~---~~~~~I~~~I~k~Gy~a~l~~~   66 (151)
                      +.|.| ||+|++|+.+|++.|..++||.++.+|+.++++.|.++   +++++|.++|+++||++.+.+.
T Consensus         4 ~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~   72 (79)
T d1p6ta2           4 AEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGE   72 (79)
T ss_dssp             EEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCS
T ss_pred             EEEEECCcccHHHHHHHHHHHhcCCCcEEEEEEeCCCEEEEEECCCCCCHHHHHHHHHHHCCceEECCc
Confidence            67999 99999999999999999999999999999999999853   6899999999999999988654


No 13 
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}
Probab=99.52  E-value=2.1e-14  Score=92.31  Aligned_cols=61  Identities=21%  Similarity=0.443  Sum_probs=56.6

Q ss_pred             CEEEEE-cCcCHhHHHHHHHHHhccCCeeEEEEeccCCEEEEEee---CCHHHHHHHHHhCCCcE
Q 045104            1 RHVLKV-HIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVN---VDSAILIKKLVRSGKYV   61 (151)
Q Consensus         1 ~~~l~V-gm~C~~C~~kIek~L~~~~GV~~v~Vn~~~~~v~V~~~---~~~~~I~~~I~k~Gy~a   61 (151)
                      ++.|+| ||+|++|+.+|+++|.+++||.++.+|+.+++++|..+   +++++|.++|+++||++
T Consensus         7 ~~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~~~~~~~i~~~i~~~Gy~v   71 (72)
T d1p6ta1           7 EIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV   71 (72)
T ss_dssp             EEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred             EEEEEECCeecHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHHhCCcc
Confidence            367999 99999999999999999999999999999999999853   68999999999999975


No 14 
>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.50  E-value=3.8e-14  Score=91.47  Aligned_cols=63  Identities=22%  Similarity=0.379  Sum_probs=57.5

Q ss_pred             CEEEEE-cCcCHhHHHHHHHHHhccCCeeEEEEeccCCEEEEEee-CCHHHHHHHHHhCCCcEEE
Q 045104            1 RHVLKV-HIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVN-VDSAILIKKLVRSGKYVEL   63 (151)
Q Consensus         1 ~~~l~V-gm~C~~C~~kIek~L~~~~GV~~v~Vn~~~~~v~V~~~-~~~~~I~~~I~k~Gy~a~l   63 (151)
                      ++.|.| ||+|++|+.+|+++|.+++||.++.||+.+++++|..+ ...++|.+.|.++||.+..
T Consensus         4 k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~i~~~i~~~GY~v~~   68 (73)
T d1mwza_           4 RYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRD   68 (73)
T ss_dssp             CEEEECTTCCSHHHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCCCCB
T ss_pred             EEEEEECCcCCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCHHHHHHHHHHcCCcccC
Confidence            468999 99999999999999999999999999999999999865 4578999999999998754


No 15 
>d1dcja_ d.68.3.3 (A:) SirA {Escherichia coli [TaxId: 562]}
Probab=74.88  E-value=4.2  Score=24.27  Aligned_cols=54  Identities=11%  Similarity=0.156  Sum_probs=38.8

Q ss_pred             EEEEE-cCcCHhHHHHHHHHHhccCCeeEEEEeccCCEEEEEee--CCHHHHHHHHHhCCCcEEEc
Q 045104            2 HVLKV-HIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVN--VDSAILIKKLVRSGKYVELL   64 (151)
Q Consensus         2 ~~l~V-gm~C~~C~~kIek~L~~~~GV~~v~Vn~~~~~v~V~~~--~~~~~I~~~I~k~Gy~a~l~   64 (151)
                      .+|.+ |+.|+...-+++++|.+++.         .+.+.|..+  ....+|...+++.|+.....
T Consensus        10 ~~lD~~G~~CP~P~l~~k~al~~~~~---------G~~l~v~~dd~~a~~di~~~~~~~g~~~~~~   66 (81)
T d1dcja_          10 HTLDALGLRCPEPVMMVRKTVRNMQP---------GETLLIIADDPATTRDIPGFCTFMEHELVAK   66 (81)
T ss_dssp             EEECCTTCCTTHHHHHHHHHHHHCCT---------TCCEEEEECSTTHHHHHHHHHHHTTCEEEEE
T ss_pred             eEEECCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEeCCCcHHHHHHHHHHHcCCEEEEE
Confidence            35677 99999999999999998742         222333322  44677888899999987543


No 16 
>d2cu6a1 d.52.8.2 (A:6-96) Hypothetical protein TTHB138 {Thermus thermophilus [TaxId: 274]}
Probab=72.87  E-value=1.7  Score=26.92  Aligned_cols=22  Identities=18%  Similarity=0.471  Sum_probs=19.0

Q ss_pred             HHHHHHHHhccCCeeEEEEecc
Q 045104           14 QQKVKKLLRKIEGVYSLHIDAE   35 (151)
Q Consensus        14 ~~kIek~L~~~~GV~~v~Vn~~   35 (151)
                      ...|+.+|.+++||.++.|++.
T Consensus        56 ~~~i~~al~~l~gv~~V~V~~~   77 (91)
T d2cu6a1          56 GEAVRQALSRLPGVEEVEVEVT   77 (91)
T ss_dssp             HHHHHHHHHTSTTCCEEEEEEC
T ss_pred             HHHHHHHHHcCCCCceEEEEEE
Confidence            6788999999999999988764


No 17 
>d1jdqa_ d.68.3.3 (A:) Hypothetical protein TM0983 {Thermotoga maritima [TaxId: 2336]}
Probab=69.53  E-value=8.8  Score=23.80  Aligned_cols=52  Identities=15%  Similarity=0.244  Sum_probs=38.2

Q ss_pred             EEEEE-cCcCHhHHHHHHHHHhccCCeeEEEEeccCCEEEEEee--CCHHHHHHHHHhCCCcEE
Q 045104            2 HVLKV-HIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVN--VDSAILIKKLVRSGKYVE   62 (151)
Q Consensus         2 ~~l~V-gm~C~~C~~kIek~L~~~~GV~~v~Vn~~~~~v~V~~~--~~~~~I~~~I~k~Gy~a~   62 (151)
                      .+|.+ |..|+...-++.++|..++.         .+.+.|..+  ....+|...+.+.|+...
T Consensus        27 ~~LD~rG~~CP~Pll~~kkal~~l~~---------Ge~L~V~~dd~~a~~dI~~~~~~~g~~i~   81 (98)
T d1jdqa_          27 KTLDVRGEVCPVPDVETKRALQNMKP---------GEILEVWIDYPMSKERIPETVKKLGHEVL   81 (98)
T ss_dssp             EEEECSSCCSSHHHHHHHHHHHTCCT---------TCEEEEEESSCTHHHHHHHHHHHSSCCEE
T ss_pred             eeEECCCCcCCHHHHHHHHHHHcCCC---------CCEEEEEeCCcchHHHHHHHHHHcCCEEE
Confidence            35778 99999999999999998742         123333322  345788888999999873


No 18 
>d1uwda_ d.52.8.2 (A:) Hypothetical protein TM0487 {Thermotoga maritima [TaxId: 2336]}
Probab=68.20  E-value=2.3  Score=27.01  Aligned_cols=22  Identities=23%  Similarity=0.499  Sum_probs=18.6

Q ss_pred             HHHHHHHHhccCCeeEEEEecc
Q 045104           14 QQKVKKLLRKIEGVYSLHIDAE   35 (151)
Q Consensus        14 ~~kIek~L~~~~GV~~v~Vn~~   35 (151)
                      ...|+++|.+++||.++.|++.
T Consensus        61 ~~~i~~al~~~~gV~~v~V~i~   82 (102)
T d1uwda_          61 LSDAEEAIKKIEGVNNVEVELT   82 (102)
T ss_dssp             HHHHHHHHHTSSSCCEEEEEEC
T ss_pred             HHHHHHHHHcCCCCceEEEEEE
Confidence            5677899999999999988764


No 19 
>d2raqa1 d.58.61.1 (A:3-95) Uncharacterized protein MTH889 {Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=65.56  E-value=11  Score=23.63  Aligned_cols=51  Identities=22%  Similarity=0.312  Sum_probs=36.9

Q ss_pred             HHHHHHHHhccCCeeEEEE-----eccCCEEEE--Eee-CCHHHHHHHHHhCCCcEEEc
Q 045104           14 QQKVKKLLRKIEGVYSLHI-----DAENQVVIV--SVN-VDSAILIKKLVRSGKYVELL   64 (151)
Q Consensus        14 ~~kIek~L~~~~GV~~v~V-----n~~~~~v~V--~~~-~~~~~I~~~I~k~Gy~a~l~   64 (151)
                      .-.+-+.|.+++||..+.+     |..+..+.|  .|. ++-++|.+.|++.|-..+..
T Consensus        19 i~e~A~~l~~~~gV~~VnitV~EiD~et~~i~itiEG~~idyd~i~~~IE~~Gg~IHSI   77 (93)
T d2raqa1          19 IPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSIHSV   77 (93)
T ss_dssp             HHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEEEEE
T ss_pred             HHHHHHHHhccCCcceEEEEEEEecccceEEEEEEEecCCCHHHHHHHHHHcCCeEEEE
Confidence            3456677888999877654     445555554  454 89999999999999876654


No 20 
>d3bpda1 d.58.61.1 (A:1-91) Uncharacterized protein AF1549 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=65.55  E-value=11  Score=23.40  Aligned_cols=48  Identities=15%  Similarity=0.178  Sum_probs=35.3

Q ss_pred             HHHHHhccCCeeEEEEe-----ccCCEEEE--Eee-CCHHHHHHHHHhCCCcEEEc
Q 045104           17 VKKLLRKIEGVYSLHID-----AENQVVIV--SVN-VDSAILIKKLVRSGKYVELL   64 (151)
Q Consensus        17 Iek~L~~~~GV~~v~Vn-----~~~~~v~V--~~~-~~~~~I~~~I~k~Gy~a~l~   64 (151)
                      +-+.|.+++||..+.+.     ..+..+.|  .|. ++-+++.+.|++.|-..+..
T Consensus        22 ~A~~l~~~~gV~~VnitV~EiD~~t~~i~ItiEG~~idyd~i~~~IE~~Gg~IHSI   77 (91)
T d3bpda1          22 FALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVIHSV   77 (91)
T ss_dssp             HHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEEEEE
T ss_pred             HHHHHhccCCcceEEEEEEEecccceEEEEEEEecCCCHHHHHHHHHHcCCeEEEE
Confidence            66779999998877543     34444444  454 89999999999999876654


No 21 
>d1je3a_ d.68.3.3 (A:) hypothetical protein YedF (EC005) {Escherichia coli [TaxId: 562]}
Probab=50.62  E-value=4.8  Score=25.09  Aligned_cols=53  Identities=9%  Similarity=0.032  Sum_probs=37.7

Q ss_pred             EEEE-cCcCHhHHHHHHHHHhccCCeeEEEEeccCCEEEEEee--CCHHHHHHHHHhCCCcEEEc
Q 045104            3 VLKV-HIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSVN--VDSAILIKKLVRSGKYVELL   64 (151)
Q Consensus         3 ~l~V-gm~C~~C~~kIek~L~~~~GV~~v~Vn~~~~~v~V~~~--~~~~~I~~~I~k~Gy~a~l~   64 (151)
                      +|.+ |+.|+...-++.++|.+++.         .+.+.|..+  ....+|...+++.||+....
T Consensus        29 ~LD~~G~~CP~Pll~~k~~l~~l~~---------Ge~L~V~~dd~~a~~di~~~~~~~g~~v~~~   84 (97)
T d1je3a_          29 RLDMVGEPCPYPAVATLEAMPQLKK---------GEILEVVSDCPQSINNIPLDARNHGYTVLDI   84 (97)
T ss_dssp             EECSBCCSSSSSTHHHHHHTTTCCS---------SCEEEEEEBCSSSSCHHHHHHHHHTCSEEEE
T ss_pred             EEeCCCCcCCHHHHHHHHHHHcCCC---------CCEEEEEeCCccHHHHHHHHHHHcCCEEEEE
Confidence            4566 99999999999999998742         122233322  34568888899999988543


No 22 
>d1nwaa_ d.58.28.1 (A:) Peptide methionine sulfoxide reductase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=48.03  E-value=15  Score=25.02  Aligned_cols=46  Identities=22%  Similarity=0.381  Sum_probs=34.9

Q ss_pred             HhHHHHHHHHHhccCCeeEEEEeccC---------------CEEEEEee---CCHHHHHHHHHh
Q 045104           11 QGCQQKVKKLLRKIEGVYSLHIDAEN---------------QVVIVSVN---VDSAILIKKLVR   56 (151)
Q Consensus        11 ~~C~~kIek~L~~~~GV~~v~Vn~~~---------------~~v~V~~~---~~~~~I~~~I~k   56 (151)
                      ++|=+-+|..+.+++||.++.+-...               +.|.|..+   ++.++|+...-+
T Consensus        13 gGCFWg~E~~f~~l~GV~~t~~GYagG~~~~PtY~~v~~H~E~V~V~yDp~~is~~~Ll~~ff~   76 (168)
T d1nwaa_          13 GGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDYRTLLEFFFQ   76 (168)
T ss_dssp             ESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECTTTCCHHHHHHHHHH
T ss_pred             cCCccccHHHHhcCCCEEEEEeeecccCCCCceeecccccceEEEEEEecccccHHHHHHHHHH
Confidence            47889999999999999999987754               33445544   677888876643


No 23 
>d2ffma1 d.267.1.1 (A:1-83) Hypothetical protein SAV1430 {Staphylococcus aureus [TaxId: 1280]}
Probab=46.74  E-value=25  Score=20.89  Aligned_cols=37  Identities=19%  Similarity=0.208  Sum_probs=27.9

Q ss_pred             HHHhccCCeeEEEEeccCCEEEEE--eeCCHHHHHHHHHhC
Q 045104           19 KLLRKIEGVYSLHIDAENQVVIVS--VNVDSAILIKKLVRS   57 (151)
Q Consensus        19 k~L~~~~GV~~v~Vn~~~~~v~V~--~~~~~~~I~~~I~k~   57 (151)
                      +.|-+++||.+|-+.  .+=++|+  .+.+++.|...|++.
T Consensus        43 ~~Lf~i~gV~~Vf~~--~dFITVtK~~~~~W~~l~~~I~~~   81 (83)
T d2ffma1          43 NDILKVEGVKSIFHV--MDFISVDKENDANWETVLPKVEAV   81 (83)
T ss_dssp             HHHHTSTTEEEEEEE--TTEEEEEECTTCCHHHHHHHHHHT
T ss_pred             HHHHcCCCceEEEEe--CCEEEEEeCCCCCHHHHHHHHHHH
Confidence            346689999987665  6677887  357899999888753


No 24 
>d1ff3a_ d.58.28.1 (A:) Peptide methionine sulfoxide reductase {Escherichia coli [TaxId: 562]}
Probab=44.87  E-value=19  Score=25.58  Aligned_cols=46  Identities=22%  Similarity=0.390  Sum_probs=34.0

Q ss_pred             HhHHHHHHHHHhccCCeeEEEEeccC-------------------CEEEEEee---CCHHHHHHHHHh
Q 045104           11 QGCQQKVKKLLRKIEGVYSLHIDAEN-------------------QVVIVSVN---VDSAILIKKLVR   56 (151)
Q Consensus        11 ~~C~~kIek~L~~~~GV~~v~Vn~~~-------------------~~v~V~~~---~~~~~I~~~I~k   56 (151)
                      .+|-|-+|..+.+++||.++.+-...                   +.|.|..+   ++-++|+....+
T Consensus        49 gGCFWg~E~~f~~l~GV~~t~~GYaGG~~~nPtY~~VcsG~TgH~E~V~V~yDp~~isy~~Ll~~F~~  116 (211)
T d1ff3a_          49 MGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWE  116 (211)
T ss_dssp             CSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred             ccchhhhhHHHhcCCCEEEEeceecCCCCCCCCccccccCCCCCceeEEEEeccccCCHHHHHHHHHH
Confidence            57888899999999999999986542                   33445543   677888877743


No 25 
>d1iwga1 d.58.44.1 (A:38-134) Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains {Escherichia coli [TaxId: 562]}
Probab=29.37  E-value=45  Score=20.01  Aligned_cols=42  Identities=12%  Similarity=0.240  Sum_probs=28.0

Q ss_pred             HHHHHHHHhccCCeeEEEEec-cCCEEEE--Eee--CCHHHHHHHHH
Q 045104           14 QQKVKKLLRKIEGVYSLHIDA-ENQVVIV--SVN--VDSAILIKKLV   55 (151)
Q Consensus        14 ~~kIek~L~~~~GV~~v~Vn~-~~~~v~V--~~~--~~~~~I~~~I~   55 (151)
                      ...||++|..++||..+.-.- ..+...|  ...  .+.+.....++
T Consensus        25 t~plE~~l~~v~gi~~i~S~S~~~G~~~i~v~f~~~~d~~~a~~~v~   71 (97)
T d1iwga1          25 TQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADIAQVQVQ   71 (97)
T ss_dssp             HHHHHHHCCCCSSCCEEEEEEETTTEEEEEEECCTTCCHHHHHHHHT
T ss_pred             hHHHHHHHhCCCCcEEEEEEEccCCcEEEEEEEeCCCCHHHHHHHHH
Confidence            457899999999999987654 4455554  433  45655555553


No 26 
>d1okga3 d.26.1.3 (A:302-373) 3-mercaptopyruvate sulfurtransferase, C-terminal domain {Leishmania major [TaxId: 5664]}
Probab=26.70  E-value=15  Score=21.36  Aligned_cols=41  Identities=15%  Similarity=0.157  Sum_probs=31.2

Q ss_pred             EEEEE-cCcCHhHHHHHHHHHhccCCeeEEEEeccCCEEEEE
Q 045104            2 HVLKV-HIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVS   42 (151)
Q Consensus         2 ~~l~V-gm~C~~C~~kIek~L~~~~GV~~v~Vn~~~~~v~V~   42 (151)
                      +++.| |.-|..--.-++.++-.+.--+.+.|-+.++++.+.
T Consensus        21 ~Tl~VDG~~~~~PDaEl~sA~~HlH~GE~A~V~FKS~Rv~~I   62 (72)
T d1okga3          21 MTLKVDGAPCERPDAEVQSAATHLHAGEAATVYFKSGRVVTI   62 (72)
T ss_dssp             CCEEETTEEESSCCHHHHHHHTTCBTTCEEEEEETTSCEEEE
T ss_pred             eEEEEcCeEcCCccHHHHHHHHHhhcCceeEEEEecCcEEEE
Confidence            45778 888888888888888887655677888888777653


No 27 
>d1fvga_ d.58.28.1 (A:) Peptide methionine sulfoxide reductase {Cow (Bos taurus) [TaxId: 9913]}
Probab=24.29  E-value=22  Score=24.75  Aligned_cols=46  Identities=24%  Similarity=0.372  Sum_probs=33.9

Q ss_pred             HhHHHHHHHHHhccCCeeEEEEeccCC-------------------EEEEEee---CCHHHHHHHHHh
Q 045104           11 QGCQQKVKKLLRKIEGVYSLHIDAENQ-------------------VVIVSVN---VDSAILIKKLVR   56 (151)
Q Consensus        11 ~~C~~kIek~L~~~~GV~~v~Vn~~~~-------------------~v~V~~~---~~~~~I~~~I~k   56 (151)
                      .+|-|-+|..+.+++||.++.+-...+                   .|.|..+   ++-++|+....+
T Consensus        44 gGCFWg~E~~f~~~~GV~~t~vGY~GG~~~nPtY~~Vc~g~TgH~E~V~V~yDp~~isy~~LL~~F~~  111 (192)
T d1fvga_          44 MGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFWE  111 (192)
T ss_dssp             ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred             ecccccceeeeeecCCeEEEEeeeccCCCCCCCcceeecCCCCCeeEEEEEEecccCCHHHHHHHHHh
Confidence            578899999999999999998876543                   2334443   677788777643


No 28 
>d1pava_ d.68.3.3 (A:) Hypothetical protein Ta1170/Ta1414 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=23.02  E-value=17  Score=21.11  Aligned_cols=50  Identities=14%  Similarity=0.067  Sum_probs=35.0

Q ss_pred             EEE-cCcCHhHHHHHHHHHhccCCeeEEEEeccCCEEEEEe--eCCHHHHHHHHHhCCCcEE
Q 045104            4 LKV-HIHCQGCQQKVKKLLRKIEGVYSLHIDAENQVVIVSV--NVDSAILIKKLVRSGKYVE   62 (151)
Q Consensus         4 l~V-gm~C~~C~~kIek~L~~~~GV~~v~Vn~~~~~v~V~~--~~~~~~I~~~I~k~Gy~a~   62 (151)
                      +.+ |..|+.-.-++.++|.+++.-+         .+.|..  .....+|....+..||...
T Consensus         9 lD~~G~~CP~Pvl~~k~~l~~l~~G~---------~l~v~~dd~~a~~di~~~~~~~g~~~~   61 (78)
T d1pava_           9 IDARGSYCPGPLMELIKAYKQAKVGE---------VISVYSTDAGTKKDAPAWIQKSGQELV   61 (78)
T ss_dssp             CCBSSCSSCTTHHHHHHHHTTSCTTC---------CEECCBSSSCHHHHHHHHHHHHTEEEC
T ss_pred             EECCCCCCCHHHHHHHHHHHhCCCCC---------EEEEEeCCccHHHHHHHHHHHcCCEEE
Confidence            456 8999999999999999874322         223322  2345778888889998653


No 29 
>d1iloa_ c.47.1.1 (A:) MTH985, a thioredoxin {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=20.97  E-value=30  Score=20.45  Aligned_cols=26  Identities=15%  Similarity=0.468  Sum_probs=17.2

Q ss_pred             EEEEE-cCcCHhHHHH---HHHHHhccCCee
Q 045104            2 HVLKV-HIHCQGCQQK---VKKLLRKIEGVY   28 (151)
Q Consensus         2 ~~l~V-gm~C~~C~~k---Iek~L~~~~GV~   28 (151)
                      ..++| |..|..|...   +++++.. .|+.
T Consensus         2 m~IkVlg~gC~~C~~~~~~v~~a~~e-~gi~   31 (77)
T d1iloa_           2 MKIQIYGTGCANCQMLEKNAREAVKE-LGID   31 (77)
T ss_dssp             EEEEEECSSSSTTHHHHHHHHHHHHH-TTCC
T ss_pred             cEEEEeCCCCccHHHHHHHHHHHHHH-cCCc
Confidence            35788 9999999654   4555554 3543


No 30 
>d2zoda1 d.79.4.1 (A:3-154) Selenide, water dikinase SelD {Aquifex aeolicus [TaxId: 63363]}
Probab=20.91  E-value=10  Score=25.32  Aligned_cols=13  Identities=31%  Similarity=0.634  Sum_probs=2.1

Q ss_pred             cCcCHhHHHHHHH
Q 045104            7 HIHCQGCQQKVKK   19 (151)
Q Consensus         7 gm~C~~C~~kIek   19 (151)
                      -|.|.+|..||-.
T Consensus         5 ~m~c~GCgaKi~~   17 (152)
T d2zoda1           5 LVRSSGCAAKVGP   17 (152)
T ss_dssp             GCC----------
T ss_pred             hhCCCcccccCCH
Confidence            3889999999843


Done!